4ZR6A

Lymnaea stagnalis acetylcholine binding protein in complex with 3-[(4e)-4-[(3-methylimidazol-4-yl)methylene]-2,3-dihydropyrrol-5-yl]pyridine
Total Genus 37
2040608010012014016018005101520253035
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
203
structure length
195
Chain Sequence
DRADILYNIRQTSRPDVIPTRPVAVSVSLKFINILEVNEITNEVDVVFWQQTTWSDRTLAWNSSHSPDQVSVPISSLWVPDLAAYNAISKPEVLTPQLARVVSDGEVLYMPSIRQRFSCDVSGVDTESGATCRIKIGSWTHHSREISVDPTDSEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (15-18)TI8 (142-145)TIV1 (21-27)S2 (47-59)S1 (27-42)TI9 (146-149)S8 (116-122)TI2 (42-45)TI3 (43-46)S6 (102-106)3H1 (61-63)TII1 (67-70)S3 (73-77)S5 (96-97)S4 (86-88)TI7 (130-133)S9 (134-142)TI4 (88-91)O1 (100-102)TI5 (106-109)O2 (123-136)TII2 (125-128)S12 (191-203)TI6 (127-130)S11 (171-184)S10 (150-154)TI11 (162-165)TI12 (166-169)TIV2 (185-188)AH1 (2-12)S7 (110-113)Updating...
connected with : NaN
molecule tags Acetylcholine binding protein
source organism Lymnaea stagnalis
publication title Structure-guided design and analysis of arylidene anabaseines and myosmines
rcsb
molecule keywords Acetylcholine-binding protein
total genus 37
structure length 195
sequence length 203
chains with identical sequence B, C, D, E
ec nomenclature
pdb deposition date 2015-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02931 Neur_chan_LBD Neurotransmitter-gated ion-channel ligand binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein; Chain: A, Neurotransmitter-gated ion-channel ligand-binding domain 4zr6A00
3GUAA 2BG9B 5SYOA 5TVCA 5AFHA 4X5TA 3WTMA 3WTNA 4EZ1A 3C84A 3JAEA 2BYPA 3UU3A 4QACA 5L4EA 3U8NA 4XHEA 5HCMA 3RHWA 3JAFA 3EI0A 4BQTA 5HCJA 5AFMA 2Y56A 5FJVA 3RIAA 2UZ6A 3EHZA 4ZK1A 4LMLA 3SH1A 2BR7A 3ZDGA 3TLWA 2YKSA 3U8JA 4UM3A 2WZYA 4QAAA 2BYRA 2YOEA 1UW6A 2BJ0A 5AFJA 5HEHA 5CO5A 3SIOA 5HEOA 3WTKA 2PGZA 4QH4A 4COFA 4ZZCA 2BG9E 4QH1A 4UM3S 5L47A 2XQ4A 3UQ4A 5J0ZA 2WNLA 2VL0A 3ZDHA 4TNVA 2C9TA 2XQ9A 4HFHA 5HEUA 2XQ8A 4QABA 3RQWA 2Y58A 5AFLA 4IL4A 5AINA 3TLTA 2X00A 5AFNA 3U8KA 2W8GA 3U8LA 4ZJSA 1UV6A 3RIFA 4A98A 5BW2A 5AFMB 2WNJA 4B5DA 2XQ7A 3JADA 3WTIA 2WN9A 4IL9A 5AFKA 2XNUA 3PEOA 2ZJUA 4HFBA 2XYTA 3WTHA 5BRXA 4ILBA 3TLUA 3IGQA 2Y54A 3RQUA 4TNWA 4F8HA 4AFHA 5HEGA 3WIPA 5L4HA 2Y7YA 4IREA 2BR8A 4TWFA 4ZZBA 5LXBA 2XZ5A 2XYSA 3UQ7A 4WV9A 2YMDA 3SQ9A 3UUBA 4AFTA 4ILCA 2XQAA 4UY2A 4BFQA 3P4WA 4A97A 3WTLA 3WTJA 4UM1A 5J5GA 4DBMA 2XQ5A 5HEJA 4TWHA 2XZ6A 4ZRUA 4ZJTA 2QC1B 4ILAA 3UU4A 2Y57A 5CFBA 4LMKA 4FRRA 4UXUA 3C79A 2BG9A 3WTOA 3P50A 5IUXA 3PMZA 4QH5A 2ZJVA 3UU8A 5KZUA 4XK9A 5JMEA 4HFCA 4LMJA 4ZR6A 2BYSA 4PIRA 3TLSA 3SQ6A 1I9BA 4D01A 4AFGA 4TWDA 3U8MA 2PH9A 2XQ3A 3EAMA 3LSVA 4HFDA 2XNTA 3UU5A 5LG3A 2BG9C 5J5IA 2BYNA 1UX2A 2WNCA 2X00D 3TLVA 4HQPA 5J5FA 5KE4A 2BYQA 2XQ6A 4UM3P 4NPPA 4HFIA 4Z91A 3UU6A 2XNVA 4NZBA 4HFEA 3RI5A 3T4MA 4ALXA 5J5HA 3ZKRA 4ZK4A 2YN6A 4Z90A 5BP0A 2W8FA 2YMEA
chains in the Genus database with same CATH superfamily
3GUAA 2BG9B 5SYOA 5TVCA 5AFHA 4X5TA 3WTMA 3WTNA 4EZ1A 3C84A 3JAEA 2BYPA 3UU3A 4QACA 5L4EA 3U8NA 4XHEA 5HCMA 3RHWA 3JAFA 3EI0A 4BQTA 5HCJA 5AFMA 2Y56A 5FJVA 3RIAA 2UZ6A 3EHZA 4ZK1A 4LMLA 3SH1A 2BR7A 3ZDGA 3TLWA 2YKSA 3U8JA 4UM3A 2WZYA 4QAAA 2BYRA 2YOEA 1UW6A 2BJ0A 5AFJA 5HEHA 5CO5A 3SIOA 5HEOA 3WTKA 2PGZA 4QH4A 4COFA 4ZZCA 2BG9E 4QH1A 4UM3S 5L47A 2XQ4A 3UQ4A 5J0ZA 2WNLA 2VL0A 3ZDHA 4TNVA 2C9TA 2XQ9A 4HFHA 5HEUA 2XQ8A 4QABA 3RQWA 2Y58A 5AFLA 4IL4A 5AINA 3TLTA 2X00A 5AFNA 3U8KA 2W8GA 3U8LA 4ZJSA 1UV6A 3RIFA 4A98A 5BW2A 5AFMB 2WNJA 4B5DA 2XQ7A 3JADA 3WTIA 2WN9A 4IL9A 5AFKA 2XNUA 3PEOA 2ZJUA 4HFBA 2XYTA 3WTHA 5BRXA 4ILBA 3TLUA 3IGQA 2Y54A 3RQUA 4TNWA 4F8HA 4AFHA 5HEGA 3WIPA 5L4HA 2Y7YA 4IREA 2BR8A 4TWFA 4ZZBA 5LXBA 2XZ5A 2XYSA 3UQ7A 4WV9A 2YMDA 3SQ9A 3UUBA 4AFTA 4ILCA 2XQAA 4UY2A 4BFQA 3P4WA 4A97A 3WTLA 3WTJA 4UM1A 5J5GA 4DBMA 2XQ5A 5HEJA 4TWHA 2XZ6A 4ZRUA 4ZJTA 2QC1B 4ILAA 3UU4A 2Y57A 5CFBA 4LMKA 4FRRA 4UXUA 3C79A 2BG9A 3WTOA 3P50A 5IUXA 3PMZA 4QH5A 2ZJVA 3UU8A 5KZUA 4XK9A 5JMEA 4HFCA 4LMJA 4ZR6A 2BYSA 4PIRA 3TLSA 3SQ6A 1I9BA 4D01A 4AFGA 4TWDA 3U8MA 2PH9A 2XQ3A 3EAMA 3LSVA 4HFDA 2XNTA 3UU5A 5LG3A 2BG9C 5J5IA 2BYNA 1UX2A 2WNCA 2X00D 3TLVA 4HQPA 5J5FA 5KE4A 2BYQA 2XQ6A 4UM3P 4NPPA 4HFIA 4Z91A 3UU6A 2XNVA 4NZBA 4HFEA 3RI5A 3T4MA 4ALXA 5J5HA 3ZKRA 4ZK4A 2YN6A 4Z90A 5BP0A 2W8FA 2YMEA
chains in the Genus database with same CATH topology
3GUAA 2BG9B 5SYOA 5TVCA 5AFHA 4X5TA 3WTMA 3WTNA 4EZ1A 3C84A 3JAEA 2BYPA 3UU3A 4QACA 5L4EA 3U8NA 4XHEA 5HCMA 3RHWA 3JAFA 3EI0A 4BQTA 5HCJA 5AFMA 2Y56A 5FJVA 3RIAA 2UZ6A 3EHZA 4ZK1A 4LMLA 3SH1A 2BR7A 3ZDGA 3TLWA 2YKSA 3U8JA 4UM3A 2WZYA 4QAAA 2BYRA 2YOEA 1UW6A 2BJ0A 5AFJA 5HEHA 5CO5A 3SIOA 5HEOA 3WTKA 2PGZA 4QH4A 4COFA 4ZZCA 2BG9E 4QH1A 4UM3S 5L47A 2XQ4A 3UQ4A 5J0ZA 2WNLA 2VL0A 3ZDHA 4TNVA 2C9TA 2XQ9A 4HFHA 5HEUA 2XQ8A 4QABA 3RQWA 2Y58A 5AFLA 4IL4A 5AINA 3TLTA 2X00A 5AFNA 3U8KA 2W8GA 3U8LA 4ZJSA 1UV6A 3RIFA 4A98A 5BW2A 5AFMB 2WNJA 4B5DA 2XQ7A 3JADA 3WTIA 2WN9A 4IL9A 5AFKA 2XNUA 3PEOA 2ZJUA 4HFBA 2XYTA 3WTHA 5BRXA 4ILBA 3TLUA 3IGQA 2Y54A 3RQUA 4TNWA 4F8HA 4AFHA 5HEGA 3WIPA 5L4HA 2Y7YA 4IREA 2BR8A 4TWFA 4ZZBA 5LXBA 2XZ5A 2XYSA 3UQ7A 4WV9A 2YMDA 3SQ9A 3UUBA 4AFTA 4ILCA 2XQAA 4UY2A 4BFQA 3P4WA 4A97A 3WTLA 3WTJA 4UM1A 5J5GA 4DBMA 2XQ5A 5HEJA 4TWHA 2XZ6A 4ZRUA 4ZJTA 2QC1B 4ILAA 3UU4A 2Y57A 5CFBA 4LMKA 4FRRA 4UXUA 3C79A 2BG9A 3WTOA 3P50A 5IUXA 3PMZA 4QH5A 2ZJVA 3UU8A 5KZUA 4XK9A 5JMEA 4HFCA 4LMJA 4ZR6A 2BYSA 4PIRA 3TLSA 3SQ6A 1I9BA 4D01A 4AFGA 4TWDA 3U8MA 2PH9A 2XQ3A 3EAMA 3LSVA 4HFDA 2XNTA 3UU5A 5LG3A 2BG9C 5J5IA 2BYNA 1UX2A 2WNCA 2X00D 3TLVA 4HQPA 5J5FA 5KE4A 2BYQA 2XQ6A 4UM3P 4NPPA 4HFIA 4Z91A 3UU6A 2XNVA 4NZBA 4HFEA 3RI5A 3T4MA 4ALXA 5J5HA 3ZKRA 4ZK4A 2YN6A 4Z90A 5BP0A 2W8FA 2YMEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3GUA A;  2BG9 B;  5SYO A;  5TVC A;  5AFH A;  4X5T A;  3WTM A;  3WTN A;  4EZ1 A;  3C84 A;  3JAE A;  2BYP A;  3UU3 A;  4QAC A;  5L4E A;  3U8N A;  4XHE A;  5HCM A;  3RHW A;  3JAF A;  3EI0 A;  4BQT A;  5HCJ A;  5AFM A;  2Y56 A;  5FJV A;  3RIA A;  2UZ6 A;  3EHZ A;  4ZK1 A;  4LML A;  3SH1 A;  2BR7 A;  3ZDG A;  3TLW A;  2YKS A;  3U8J A;  4UM3 A;  2WZY A;  4QAA A;  2BYR A;  2YOE A;  1UW6 A;  2BJ0 A;  5AFJ A;  5HEH A;  5CO5 A;  3SIO A;  5HEO A;  3WTK A;  2PGZ A;  4QH4 A;  4COF A;  4ZZC A;  2BG9 E;  4QH1 A;  4UM3 S;  5L47 A;  2XQ4 A;  3UQ4 A;  5J0Z A;  2WNL A;  2VL0 A;  3ZDH A;  4TNV A;  2C9T A;  2XQ9 A;  4HFH A;  5HEU A;  2XQ8 A;  4QAB A;  3RQW A;  2Y58 A;  5AFL A;  4IL4 A;  5AIN A;  3TLT A;  2X00 A;  5AFN A;  3U8K A;  2W8G A;  3U8L A;  4ZJS A;  1UV6 A;  3RIF A;  4A98 A;  5BW2 A;  5AFM B;  2WNJ A;  4B5D A;  2XQ7 A;  3JAD A;  3WTI A;  2WN9 A;  4IL9 A;  5AFK A;  2XNU A;  3PEO A;  2ZJU A;  4HFB A;  2XYT A;  3WTH A;  5BRX A;  4ILB A;  3TLU A;  3IGQ A;  2Y54 A;  3RQU A;  4TNW A;  4F8H A;  4AFH A;  5HEG A;  3WIP A;  5L4H A;  2Y7Y A;  4IRE A;  2BR8 A;  4TWF A;  4ZZB A;  5LXB A;  2XZ5 A;  2XYS A;  3UQ7 A;  4WV9 A;  2YMD A;  3SQ9 A;  3UUB A;  4AFT A;  4ILC A;  2XQA A;  4UY2 A;  4BFQ A;  3P4W A;  4A97 A;  3WTL A;  3WTJ A;  4UM1 A;  5J5G A;  4DBM A;  2XQ5 A;  5HEJ A;  4TWH A;  2XZ6 A;  4ZRU A;  4ZJT A;  2QC1 B;  4ILA A;  3UU4 A;  2Y57 A;  5CFB A;  4LMK A;  4FRR A;  4UXU A;  3C79 A;  2BG9 A;  3WTO A;  3P50 A;  5IUX A;  3PMZ A;  4QH5 A;  2ZJV A;  3UU8 A;  5KZU A;  4XK9 A;  5JME A;  4HFC A;  4LMJ A;  4ZR6 A;  2BYS A;  4PIR A;  3TLS A;  3SQ6 A;  1I9B A;  4D01 A;  4AFG A;  4TWD A;  3U8M A;  2PH9 A;  2XQ3 A;  3EAM A;  3LSV A;  4HFD A;  2XNT A;  3UU5 A;  5LG3 A;  2BG9 C;  5J5I A;  2BYN A;  1UX2 A;  2WNC A;  2X00 D;  3TLV A;  4HQP A;  5J5F A;  5KE4 A;  2BYQ A;  2XQ6 A;  4UM3 P;  4NPP A;  4HFI A;  4Z91 A;  3UU6 A;  2XNV A;  4NZB A;  4HFE A;  3RI5 A;  3T4M A;  4ALX A;  5J5H A;  3ZKR A;  4ZK4 A;  2YN6 A;  4Z90 A;  5BP0 A;  2W8F A;  2YME A; 
#chains in the Genus database with same CATH topology
 3GUA A;  2BG9 B;  5SYO A;  5TVC A;  5AFH A;  4X5T A;  3WTM A;  3WTN A;  4EZ1 A;  3C84 A;  3JAE A;  2BYP A;  3UU3 A;  4QAC A;  5L4E A;  3U8N A;  4XHE A;  5HCM A;  3RHW A;  3JAF A;  3EI0 A;  4BQT A;  5HCJ A;  5AFM A;  2Y56 A;  5FJV A;  3RIA A;  2UZ6 A;  3EHZ A;  4ZK1 A;  4LML A;  3SH1 A;  2BR7 A;  3ZDG A;  3TLW A;  2YKS A;  3U8J A;  4UM3 A;  2WZY A;  4QAA A;  2BYR A;  2YOE A;  1UW6 A;  2BJ0 A;  5AFJ A;  5HEH A;  5CO5 A;  3SIO A;  5HEO A;  3WTK A;  2PGZ A;  4QH4 A;  4COF A;  4ZZC A;  2BG9 E;  4QH1 A;  4UM3 S;  5L47 A;  2XQ4 A;  3UQ4 A;  5J0Z A;  2WNL A;  2VL0 A;  3ZDH A;  4TNV A;  2C9T A;  2XQ9 A;  4HFH A;  5HEU A;  2XQ8 A;  4QAB A;  3RQW A;  2Y58 A;  5AFL A;  4IL4 A;  5AIN A;  3TLT A;  2X00 A;  5AFN A;  3U8K A;  2W8G A;  3U8L A;  4ZJS A;  1UV6 A;  3RIF A;  4A98 A;  5BW2 A;  5AFM B;  2WNJ A;  4B5D A;  2XQ7 A;  3JAD A;  3WTI A;  2WN9 A;  4IL9 A;  5AFK A;  2XNU A;  3PEO A;  2ZJU A;  4HFB A;  2XYT A;  3WTH A;  5BRX A;  4ILB A;  3TLU A;  3IGQ A;  2Y54 A;  3RQU A;  4TNW A;  4F8H A;  4AFH A;  5HEG A;  3WIP A;  5L4H A;  2Y7Y A;  4IRE A;  2BR8 A;  4TWF A;  4ZZB A;  5LXB A;  2XZ5 A;  2XYS A;  3UQ7 A;  4WV9 A;  2YMD A;  3SQ9 A;  3UUB A;  4AFT A;  4ILC A;  2XQA A;  4UY2 A;  4BFQ A;  3P4W A;  4A97 A;  3WTL A;  3WTJ A;  4UM1 A;  5J5G A;  4DBM A;  2XQ5 A;  5HEJ A;  4TWH A;  2XZ6 A;  4ZRU A;  4ZJT A;  2QC1 B;  4ILA A;  3UU4 A;  2Y57 A;  5CFB A;  4LMK A;  4FRR A;  4UXU A;  3C79 A;  2BG9 A;  3WTO A;  3P50 A;  5IUX A;  3PMZ A;  4QH5 A;  2ZJV A;  3UU8 A;  5KZU A;  4XK9 A;  5JME A;  4HFC A;  4LMJ A;  4ZR6 A;  2BYS A;  4PIR A;  3TLS A;  3SQ6 A;  1I9B A;  4D01 A;  4AFG A;  4TWD A;  3U8M A;  2PH9 A;  2XQ3 A;  3EAM A;  3LSV A;  4HFD A;  2XNT A;  3UU5 A;  5LG3 A;  2BG9 C;  5J5I A;  2BYN A;  1UX2 A;  2WNC A;  2X00 D;  3TLV A;  4HQP A;  5J5F A;  5KE4 A;  2BYQ A;  2XQ6 A;  4UM3 P;  4NPP A;  4HFI A;  4Z91 A;  3UU6 A;  2XNV A;  4NZB A;  4HFE A;  3RI5 A;  3T4M A;  4ALX A;  5J5H A;  3ZKR A;  4ZK4 A;  2YN6 A;  4Z90 A;  5BP0 A;  2W8F A;  2YME A; 
#chains in the Genus database with same CATH homology
 3GUA A;  2BG9 B;  5SYO A;  5TVC A;  5AFH A;  4X5T A;  3WTM A;  3WTN A;  4EZ1 A;  3C84 A;  3JAE A;  2BYP A;  3UU3 A;  4QAC A;  5L4E A;  3U8N A;  4XHE A;  5HCM A;  3RHW A;  3JAF A;  3EI0 A;  4BQT A;  5HCJ A;  5AFM A;  2Y56 A;  5FJV A;  3RIA A;  2UZ6 A;  3EHZ A;  4ZK1 A;  4LML A;  3SH1 A;  2BR7 A;  3ZDG A;  3TLW A;  2YKS A;  3U8J A;  4UM3 A;  2WZY A;  4QAA A;  2BYR A;  2YOE A;  1UW6 A;  2BJ0 A;  5AFJ A;  5HEH A;  5CO5 A;  3SIO A;  5HEO A;  3WTK A;  2PGZ A;  4QH4 A;  4COF A;  4ZZC A;  2BG9 E;  4QH1 A;  4UM3 S;  5L47 A;  2XQ4 A;  3UQ4 A;  5J0Z A;  2WNL A;  2VL0 A;  3ZDH A;  4TNV A;  2C9T A;  2XQ9 A;  4HFH A;  5HEU A;  2XQ8 A;  4QAB A;  3RQW A;  2Y58 A;  5AFL A;  4IL4 A;  5AIN A;  3TLT A;  2X00 A;  5AFN A;  3U8K A;  2W8G A;  3U8L A;  4ZJS A;  1UV6 A;  3RIF A;  4A98 A;  5BW2 A;  5AFM B;  2WNJ A;  4B5D A;  2XQ7 A;  3JAD A;  3WTI A;  2WN9 A;  4IL9 A;  5AFK A;  2XNU A;  3PEO A;  2ZJU A;  4HFB A;  2XYT A;  3WTH A;  5BRX A;  4ILB A;  3TLU A;  3IGQ A;  2Y54 A;  3RQU A;  4TNW A;  4F8H A;  4AFH A;  5HEG A;  3WIP A;  5L4H A;  2Y7Y A;  4IRE A;  2BR8 A;  4TWF A;  4ZZB A;  5LXB A;  2XZ5 A;  2XYS A;  3UQ7 A;  4WV9 A;  2YMD A;  3SQ9 A;  3UUB A;  4AFT A;  4ILC A;  2XQA A;  4UY2 A;  4BFQ A;  3P4W A;  4A97 A;  3WTL A;  3WTJ A;  4UM1 A;  5J5G A;  4DBM A;  2XQ5 A;  5HEJ A;  4TWH A;  2XZ6 A;  4ZRU A;  4ZJT A;  2QC1 B;  4ILA A;  3UU4 A;  2Y57 A;  5CFB A;  4LMK A;  4FRR A;  4UXU A;  3C79 A;  2BG9 A;  3WTO A;  3P50 A;  5IUX A;  3PMZ A;  4QH5 A;  2ZJV A;  3UU8 A;  5KZU A;  4XK9 A;  5JME A;  4HFC A;  4LMJ A;  4ZR6 A;  2BYS A;  4PIR A;  3TLS A;  3SQ6 A;  1I9B A;  4D01 A;  4AFG A;  4TWD A;  3U8M A;  2PH9 A;  2XQ3 A;  3EAM A;  3LSV A;  4HFD A;  2XNT A;  3UU5 A;  5LG3 A;  2BG9 C;  5J5I A;  2BYN A;  1UX2 A;  2WNC A;  2X00 D;  3TLV A;  4HQP A;  5J5F A;  5KE4 A;  2BYQ A;  2XQ6 A;  4UM3 P;  4NPP A;  4HFI A;  4Z91 A;  3UU6 A;  2XNV A;  4NZB A;  4HFE A;  3RI5 A;  3T4M A;  4ALX A;  5J5H A;  3ZKR A;  4ZK4 A;  2YN6 A;  4Z90 A;  5BP0 A;  2W8F A;  2YME A; 
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