2GG9A

Novel bacterial methionine aminopeptidase inhibitors
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
263
structure length
263
Chain Sequence
AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Methionine aminopeptidase
publication title Serendipitous discovery of novel bacterial methionine aminopeptidase inhibitors.
pubmed doi rcsb
source organism Escherichia coli k12
molecule tags Hydrolase
total genus 86
structure length 263
sequence length 263
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2006-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2gg9A00
4FLLA 4JUQA 1QXYA 1XGSA 5CLSA 1WY2A 2OKNA 4PV4A 2BWUA 4S00A 5CIKA 5FCFA 2Q92A 2BB7A 2GU7A 1B59A 2ZSGA 1WLRA 3RVAA 4FLIA 5CDEA 1XGNA 2GG7A 2GG8A 4R60A 3D27A 1KQ9A 1BOAA 2V6CA 4U75A 1R58A 4IKRA 1C27A 5D6FA 5JI6A 2V3XA 3IU7A 4S2RP 4U71A 1XGMA 3TAVA 1QZYA 4FO8A 2BHCA 2GG2A 2GG3A 1CHMA 4IKTA 3S6BA 1KP0A 3CB5A 1YJ3A 3L24A 2GG5A 4U6EA 4QR8A 4IKUA 1C24A 2EVCA 2NQ7A 2NQ6A 5CNXA 3IU9A 1XNZA 3MATA 4U70A 3TB5A 4U6WA 1WL6A 1R5HA 2P99A 3BIQA 4MATA 4U76A 2B3HA 3MX6A 2EA2A 4S01A 2BH3A 3FMQA 5JHUA 1C22A 1R5GA 4HXXA 2GU5A 1Y1NA 1C21A 3BIPA 4ZWPA 1YW7A 2BHAA 2Q93A 4IKSA 2GGCA 2P98A 4ZNGA 3CB6A 5JFRA 2GU4A 4U69A 4B28A 3CTZA 5CDLA 4RZZA 2G6PA 1BN5A 4ZWUA 4EGEA 1YVMA 1MATA 2DFIA 2BHBA 2Q95A 1N51A 1KQ0A 2B3LA 2BWSA 4OOKA 1PV9A 2EVMA 2GTXA 2Q8KA 2B3KA 3IU8A 3FM3A 1WKMA 2GA2A 2Q94A 3PKAA 4IU6A 3BITA 2HOWA 1WBQA 2BWTA 2BWYA 4FLKA 2P9AA 4RGZ1 2EVOA 2GU6A 1YW9A 3MR1A 1JAWA 4PNCA 4U6ZA 4IF7A 2IW2A 2GZ5A 4S2TP 4RZYA 5FCHA 2V3ZA 4A6WA 2BHDA 1O0XA 4Z7MA 3RORA 1QXWA 1YW8A 4FUKA 4IECA 3PKBA 4KM3A 1B6AA 2OAZA 1QXZA 4ZWOA 3IG4A 4U73A 1A16A 1W2MA 4IPAA 5CDVA 2BWVA 2BWWA 2GG0A 1WL9A 4U6CA 4FO7A 4U1BA 2GG9A 3FMRA 2V3YA 2Q96A 4FKCA 4FLJA 3PKDA 2MATA 1WN1A 3L7GA 1C23A 3Q6DA 1XGOA 2EA4A 4IDYA 4U6JA 5E5BA 4A6VA 5D6EA 3PKCA 2GGBA 2BWXA 1M35A 2BN7A 1W7VA 3PKEA 5CE6A 2ADUA
chains in the Genus database with same CATH superfamily
4FLLA 4JUQA 1QXYA 1XGSA 5CLSA 1WY2A 2OKNA 4PV4A 2BWUA 4S00A 5CIKA 5FCFA 2Q92A 2BB7A 2GU7A 1B59A 2ZSGA 1WLRA 3RVAA 4FLIA 5CDEA 1XGNA 2GG7A 2GG8A 4R60A 3D27A 1KQ9A 1BOAA 2V6CA 4U75A 1R58A 4IKRA 1C27A 5D6FA 5JI6A 2V3XA 3IU7A 4S2RP 4U71A 1XGMA 3TAVA 1QZYA 4FO8A 2BHCA 2GG2A 2GG3A 1CHMA 4IKTA 3S6BA 1KP0A 3CB5A 1YJ3A 3L24A 2GG5A 4U6EA 4QR8A 4IKUA 1C24A 2EVCA 2NQ7A 2NQ6A 5CNXA 3IU9A 1XNZA 3MATA 4U70A 3TB5A 4U6WA 1WL6A 1R5HA 2P99A 3BIQA 4MATA 4U76A 2B3HA 3MX6A 2EA2A 4S01A 2BH3A 3FMQA 5JHUA 1C22A 1R5GA 4HXXA 2GU5A 1Y1NA 1C21A 3BIPA 4ZWPA 1YW7A 2BHAA 2Q93A 4IKSA 2GGCA 2P98A 4ZNGA 3CB6A 5JFRA 2GU4A 4U69A 4B28A 3CTZA 5CDLA 4RZZA 2G6PA 1BN5A 4ZWUA 4EGEA 1YVMA 1MATA 2DFIA 2BHBA 2Q95A 1N51A 1KQ0A 2B3LA 2BWSA 4OOKA 1PV9A 2EVMA 2GTXA 2Q8KA 2B3KA 3IU8A 3FM3A 1WKMA 2GA2A 2Q94A 3PKAA 4IU6A 3BITA 2HOWA 1WBQA 2BWTA 2BWYA 4FLKA 2P9AA 4RGZ1 2EVOA 2GU6A 1YW9A 3MR1A 1JAWA 4PNCA 4U6ZA 4IF7A 2IW2A 2GZ5A 4S2TP 4RZYA 5FCHA 2V3ZA 4A6WA 2BHDA 1O0XA 4Z7MA 3RORA 1QXWA 1YW8A 4FUKA 4IECA 3PKBA 4KM3A 1B6AA 2OAZA 1QXZA 4ZWOA 3IG4A 4U73A 1A16A 1W2MA 4IPAA 5CDVA 2BWVA 2BWWA 2GG0A 1WL9A 4U6CA 4FO7A 4U1BA 2GG9A 3FMRA 2V3YA 2Q96A 4FKCA 4FLJA 3PKDA 2MATA 1WN1A 3L7GA 1C23A 3Q6DA 1XGOA 2EA4A 4IDYA 4U6JA 5E5BA 4A6VA 5D6EA 3PKCA 2GGBA 2BWXA 1M35A 2BN7A 1W7VA 3PKEA 5CE6A 2ADUA
chains in the Genus database with same CATH topology
4FLLA 4JUQA 1QXYA 1XGSA 5CLSA 1WY2A 2OKNA 4PV4A 2BWUA 4S00A 5CIKA 5FCFA 2Q92A 2BB7A 2GU7A 1B59A 2ZSGA 1WLRA 3RVAA 4FLIA 5CDEA 1XGNA 2GG7A 2GG8A 4R60A 3D27A 1KQ9A 1BOAA 2V6CA 4U75A 1R58A 4IKRA 1C27A 5D6FA 5JI6A 2V3XA 3IU7A 4S2RP 4U71A 1XGMA 3TAVA 1QZYA 4FO8A 2BHCA 2GG2A 2GG3A 1CHMA 4IKTA 3S6BA 1KP0A 3CB5A 1YJ3A 3L24A 2GG5A 4U6EA 4QR8A 4IKUA 1C24A 2EVCA 2NQ7A 2NQ6A 5CNXA 3IU9A 1XNZA 3MATA 4U70A 3TB5A 4U6WA 1WL6A 1R5HA 2P99A 3BIQA 4MATA 4U76A 2B3HA 3MX6A 2EA2A 4S01A 2BH3A 3FMQA 5JHUA 1C22A 1R5GA 4HXXA 2GU5A 1Y1NA 1C21A 3BIPA 4ZWPA 1YW7A 2BHAA 2Q93A 4IKSA 2GGCA 2P98A 4ZNGA 3CB6A 5JFRA 2GU4A 4U69A 4B28A 3CTZA 5CDLA 4RZZA 2G6PA 1BN5A 4ZWUA 4EGEA 1YVMA 1MATA 2DFIA 2BHBA 2Q95A 1N51A 1KQ0A 2B3LA 2BWSA 4OOKA 1PV9A 2EVMA 2GTXA 2Q8KA 2B3KA 3IU8A 3FM3A 1WKMA 2GA2A 2Q94A 3PKAA 4IU6A 3BITA 2HOWA 1WBQA 2BWTA 2BWYA 4FLKA 2P9AA 4RGZ1 2EVOA 2GU6A 1YW9A 3MR1A 1JAWA 4PNCA 4U6ZA 4IF7A 2IW2A 2GZ5A 4S2TP 4RZYA 5FCHA 2V3ZA 4A6WA 2BHDA 1O0XA 4Z7MA 3RORA 1QXWA 1YW8A 4FUKA 4IECA 3PKBA 4KM3A 1B6AA 2OAZA 1QXZA 4ZWOA 3IG4A 4U73A 1A16A 1W2MA 4IPAA 5CDVA 2BWVA 2BWWA 2GG0A 1WL9A 4U6CA 4FO7A 4U1BA 2GG9A 3FMRA 2V3YA 2Q96A 4FKCA 4FLJA 3PKDA 2MATA 1WN1A 3L7GA 1C23A 3Q6DA 1XGOA 2EA4A 4IDYA 4U6JA 5E5BA 4A6VA 5D6EA 3PKCA 2GGBA 2BWXA 1M35A 2BN7A 1W7VA 3PKEA 5CE6A 2ADUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FLL A;  4JUQ A;  1QXY A;  1XGS A;  5CLS A;  1WY2 A;  2OKN A;  4PV4 A;  2BWU A;  4S00 A;  5CIK A;  5FCF A;  2Q92 A;  2BB7 A;  2GU7 A;  1B59 A;  2ZSG A;  1WLR A;  3RVA A;  4FLI A;  5CDE A;  1XGN A;  2GG7 A;  2GG8 A;  4R60 A;  3D27 A;  1KQ9 A;  1BOA A;  2V6C A;  4U75 A;  1R58 A;  4IKR A;  1C27 A;  5D6F A;  5JI6 A;  2V3X A;  3IU7 A;  4S2R P;  4U71 A;  1XGM A;  3TAV A;  1QZY A;  4FO8 A;  2BHC A;  2GG2 A;  2GG3 A;  1CHM A;  4IKT A;  3S6B A;  1KP0 A;  3CB5 A;  1YJ3 A;  3L24 A;  2GG5 A;  4U6E A;  4QR8 A;  4IKU A;  1C24 A;  2EVC A;  2NQ7 A;  2NQ6 A;  5CNX A;  3IU9 A;  1XNZ A;  3MAT A;  4U70 A;  3TB5 A;  4U6W A;  1WL6 A;  1R5H A;  2P99 A;  3BIQ A;  4MAT A;  4U76 A;  2B3H A;  3MX6 A;  2EA2 A;  4S01 A;  2BH3 A;  3FMQ A;  5JHU A;  1C22 A;  1R5G A;  4HXX A;  2GU5 A;  1Y1N A;  1C21 A;  3BIP A;  4ZWP A;  1YW7 A;  2BHA A;  2Q93 A;  4IKS A;  2GGC A;  2P98 A;  4ZNG A;  3CB6 A;  5JFR A;  2GU4 A;  4U69 A;  4B28 A;  3CTZ A;  5CDL A;  4RZZ A;  2G6P A;  1BN5 A;  4ZWU A;  4EGE A;  1YVM A;  1MAT A;  2DFI A;  2BHB A;  2Q95 A;  1N51 A;  1KQ0 A;  2B3L A;  2BWS A;  4OOK A;  1PV9 A;  2EVM A;  2GTX A;  2Q8K A;  2B3K A;  3IU8 A;  3FM3 A;  1WKM A;  2GA2 A;  2Q94 A;  3PKA A;  4IU6 A;  3BIT A;  2HOW A;  1WBQ A;  2BWT A;  2BWY A;  4FLK A;  2P9A A;  4RGZ 1;  2EVO A;  2GU6 A;  1YW9 A;  3MR1 A;  1JAW A;  4PNC A;  4U6Z A;  4IF7 A;  2IW2 A;  2GZ5 A;  4S2T P;  4RZY A;  5FCH A;  2V3Z A;  4A6W A;  2BHD A;  1O0X A;  4Z7M A;  3ROR A;  1QXW A;  1YW8 A;  4FUK A;  4IEC A;  3PKB A;  4KM3 A;  1B6A A;  2OAZ A;  1QXZ A;  4ZWO A;  3IG4 A;  4U73 A;  1A16 A;  1W2M A;  4IPA A;  5CDV A;  2BWV A;  2BWW A;  2GG0 A;  1WL9 A;  4U6C A;  4FO7 A;  4U1B A;  2GG9 A;  3FMR A;  2V3Y A;  2Q96 A;  4FKC A;  4FLJ A;  3PKD A;  2MAT A;  1WN1 A;  3L7G A;  1C23 A;  3Q6D A;  1XGO A;  2EA4 A;  4IDY A;  4U6J A;  5E5B A;  4A6V A;  5D6E A;  3PKC A;  2GGB A;  2BWX A;  1M35 A;  2BN7 A;  1W7V A;  3PKE A;  5CE6 A;  2ADU A; 
#chains in the Genus database with same CATH topology
 4FLL A;  4JUQ A;  1QXY A;  1XGS A;  5CLS A;  1WY2 A;  2OKN A;  4PV4 A;  2BWU A;  4S00 A;  5CIK A;  5FCF A;  2Q92 A;  2BB7 A;  2GU7 A;  1B59 A;  2ZSG A;  1WLR A;  3RVA A;  4FLI A;  5CDE A;  1XGN A;  2GG7 A;  2GG8 A;  4R60 A;  3D27 A;  1KQ9 A;  1BOA A;  2V6C A;  4U75 A;  1R58 A;  4IKR A;  1C27 A;  5D6F A;  5JI6 A;  2V3X A;  3IU7 A;  4S2R P;  4U71 A;  1XGM A;  3TAV A;  1QZY A;  4FO8 A;  2BHC A;  2GG2 A;  2GG3 A;  1CHM A;  4IKT A;  3S6B A;  1KP0 A;  3CB5 A;  1YJ3 A;  3L24 A;  2GG5 A;  4U6E A;  4QR8 A;  4IKU A;  1C24 A;  2EVC A;  2NQ7 A;  2NQ6 A;  5CNX A;  3IU9 A;  1XNZ A;  3MAT A;  4U70 A;  3TB5 A;  4U6W A;  1WL6 A;  1R5H A;  2P99 A;  3BIQ A;  4MAT A;  4U76 A;  2B3H A;  3MX6 A;  2EA2 A;  4S01 A;  2BH3 A;  3FMQ A;  5JHU A;  1C22 A;  1R5G A;  4HXX A;  2GU5 A;  1Y1N A;  1C21 A;  3BIP A;  4ZWP A;  1YW7 A;  2BHA A;  2Q93 A;  4IKS A;  2GGC A;  2P98 A;  4ZNG A;  3CB6 A;  5JFR A;  2GU4 A;  4U69 A;  4B28 A;  3CTZ A;  5CDL A;  4RZZ A;  2G6P A;  1BN5 A;  4ZWU A;  4EGE A;  1YVM A;  1MAT A;  2DFI A;  2BHB A;  2Q95 A;  1N51 A;  1KQ0 A;  2B3L A;  2BWS A;  4OOK A;  1PV9 A;  2EVM A;  2GTX A;  2Q8K A;  2B3K A;  3IU8 A;  3FM3 A;  1WKM A;  2GA2 A;  2Q94 A;  3PKA A;  4IU6 A;  3BIT A;  2HOW A;  1WBQ A;  2BWT A;  2BWY A;  4FLK A;  2P9A A;  4RGZ 1;  2EVO A;  2GU6 A;  1YW9 A;  3MR1 A;  1JAW A;  4PNC A;  4U6Z A;  4IF7 A;  2IW2 A;  2GZ5 A;  4S2T P;  4RZY A;  5FCH A;  2V3Z A;  4A6W A;  2BHD A;  1O0X A;  4Z7M A;  3ROR A;  1QXW A;  1YW8 A;  4FUK A;  4IEC A;  3PKB A;  4KM3 A;  1B6A A;  2OAZ A;  1QXZ A;  4ZWO A;  3IG4 A;  4U73 A;  1A16 A;  1W2M A;  4IPA A;  5CDV A;  2BWV A;  2BWW A;  2GG0 A;  1WL9 A;  4U6C A;  4FO7 A;  4U1B A;  2GG9 A;  3FMR A;  2V3Y A;  2Q96 A;  4FKC A;  4FLJ A;  3PKD A;  2MAT A;  1WN1 A;  3L7G A;  1C23 A;  3Q6D A;  1XGO A;  2EA4 A;  4IDY A;  4U6J A;  5E5B A;  4A6V A;  5D6E A;  3PKC A;  2GGB A;  2BWX A;  1M35 A;  2BN7 A;  1W7V A;  3PKE A;  5CE6 A;  2ADU A; 
#chains in the Genus database with same CATH homology
 4FLL A;  4JUQ A;  1QXY A;  1XGS A;  5CLS A;  1WY2 A;  2OKN A;  4PV4 A;  2BWU A;  4S00 A;  5CIK A;  5FCF A;  2Q92 A;  2BB7 A;  2GU7 A;  1B59 A;  2ZSG A;  1WLR A;  3RVA A;  4FLI A;  5CDE A;  1XGN A;  2GG7 A;  2GG8 A;  4R60 A;  3D27 A;  1KQ9 A;  1BOA A;  2V6C A;  4U75 A;  1R58 A;  4IKR A;  1C27 A;  5D6F A;  5JI6 A;  2V3X A;  3IU7 A;  4S2R P;  4U71 A;  1XGM A;  3TAV A;  1QZY A;  4FO8 A;  2BHC A;  2GG2 A;  2GG3 A;  1CHM A;  4IKT A;  3S6B A;  1KP0 A;  3CB5 A;  1YJ3 A;  3L24 A;  2GG5 A;  4U6E A;  4QR8 A;  4IKU A;  1C24 A;  2EVC A;  2NQ7 A;  2NQ6 A;  5CNX A;  3IU9 A;  1XNZ A;  3MAT A;  4U70 A;  3TB5 A;  4U6W A;  1WL6 A;  1R5H A;  2P99 A;  3BIQ A;  4MAT A;  4U76 A;  2B3H A;  3MX6 A;  2EA2 A;  4S01 A;  2BH3 A;  3FMQ A;  5JHU A;  1C22 A;  1R5G A;  4HXX A;  2GU5 A;  1Y1N A;  1C21 A;  3BIP A;  4ZWP A;  1YW7 A;  2BHA A;  2Q93 A;  4IKS A;  2GGC A;  2P98 A;  4ZNG A;  3CB6 A;  5JFR A;  2GU4 A;  4U69 A;  4B28 A;  3CTZ A;  5CDL A;  4RZZ A;  2G6P A;  1BN5 A;  4ZWU A;  4EGE A;  1YVM A;  1MAT A;  2DFI A;  2BHB A;  2Q95 A;  1N51 A;  1KQ0 A;  2B3L A;  2BWS A;  4OOK A;  1PV9 A;  2EVM A;  2GTX A;  2Q8K A;  2B3K A;  3IU8 A;  3FM3 A;  1WKM A;  2GA2 A;  2Q94 A;  3PKA A;  4IU6 A;  3BIT A;  2HOW A;  1WBQ A;  2BWT A;  2BWY A;  4FLK A;  2P9A A;  4RGZ 1;  2EVO A;  2GU6 A;  1YW9 A;  3MR1 A;  1JAW A;  4PNC A;  4U6Z A;  4IF7 A;  2IW2 A;  2GZ5 A;  4S2T P;  4RZY A;  5FCH A;  2V3Z A;  4A6W A;  2BHD A;  1O0X A;  4Z7M A;  3ROR A;  1QXW A;  1YW8 A;  4FUK A;  4IEC A;  3PKB A;  4KM3 A;  1B6A A;  2OAZ A;  1QXZ A;  4ZWO A;  3IG4 A;  4U73 A;  1A16 A;  1W2M A;  4IPA A;  5CDV A;  2BWV A;  2BWW A;  2GG0 A;  1WL9 A;  4U6C A;  4FO7 A;  4U1B A;  2GG9 A;  3FMR A;  2V3Y A;  2Q96 A;  4FKC A;  4FLJ A;  3PKD A;  2MAT A;  1WN1 A;  3L7G A;  1C23 A;  3Q6D A;  1XGO A;  2EA4 A;  4IDY A;  4U6J A;  5E5B A;  4A6V A;  5D6E A;  3PKC A;  2GGB A;  2BWX A;  1M35 A;  2BN7 A;  1W7V A;  3PKE A;  5CE6 A;  2ADU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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