3RORA

Crystal structure of c105s mutant of mycobacterium tuberculosis methionine aminopeptidase
Total Genus 85
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
85
sequence length
282
structure length
282
Chain Sequence
RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCSTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTCL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Mycobacterium tuberculosis
publication title Crystal structure of C105S mutant of Mycobacterium tuberculosis methionine aminopeptidase
rcsb
molecule keywords Methionine aminopeptidase
total genus 85
structure length 282
sequence length 282
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2011-04-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rorA01
1YVMA 4ZWPA 1MATA 4Z7MA 5CLSA 4FO7A 4KM3A 2OAZA 4U6JA 1XGSA 2NQ6A 2BWTA 3PKCA 2HOWA 3IU9A 3BIPA 2ADUA 1WL6A 3BITA 1KQ0A 2G6PA 1C27A 2Q93A 4A6VA 2BH3A 4U6WA 2V3YA 4FKCA 2GGCA 2GTXA 3PKBA 4QR8A 3FMQA 4S01A 4RZYA 1C24A 2V6CA 4U1BA 2EVCA 1PV9A 1XGOA 2BWXA 1M35A 3D27A 3MATA 2BWVA 2DFIA 5CE6A 5D6EA 3PKAA 5CDEA 2Q95A 2B3KA 2BB7A 2GU4A 1C23A 4ZNGA 2P98A 5CNXA 1C21A 3IU8A 2MATA 1WKMA 1YW9A 4S2TP 5CDLA 4IKSA 4S00A 1XGMA 3TB5A 4PV4A 1KQ9A 2OKNA 2GG2A 3FMRA 2BHBA 2Q96A 3CB5A 1QXZA 1QZYA 5FCFA 3BIQA 5JFRA 5JHUA 2EA4A 2GU7A 2V3ZA 4ZWOA 2GU6A 4IF7A 4U6EA 2V3XA 3IG4A 2BWWA 4R60A 4ZWUA 1R5HA 2BWSA 1B59A 2GG9A 1W7VA 2B3HA 2GG0A 1O0XA 2GA2A 1YJ3A 2EVOA 3CB6A 5CIKA 2P9AA 4FUKA 4IECA 1BN5A 2BHDA 2P99A 2GZ5A 1JAWA 1CHMA 4S2RP 4IKUA 2B3LA 2GG5A 4U73A 1WBQA 4MATA 3PKEA 1W2MA 3CTZA 1WN1A 4OOKA 4RZZA 1A16A 4PNCA 4U6CA 2GG8A 1KP0A 2BWUA 3S6BA 4EGEA 4FO8A 4IU6A 1BOAA 1XGNA 1N51A 2NQ7A 3FM3A 3L24A 1QXYA 1YW7A 1B6AA 4A6WA 4IKTA 1YW8A 2BWYA 2EA2A 2ZSGA 2GG3A 4FLLA 1R58A 1R5GA 5D6FA 4HXXA 5CDVA 2IW2A 5FCHA 3Q6DA 1QXWA 3PKDA 4IKRA 2Q94A 3IU7A 4FLIA 3L7GA 3MX6A 2BHAA 4U70A 5E5BA 4B28A 2Q92A 1Y1NA 4FLKA 2GU5A 3TAVA 4U6ZA 4IPAA 4FLJA 4JUQA 2GGBA 4U75A 2EVMA 3RVAA 4U69A 2Q8KA 2BN7A 1WL9A 4IDYA 4RGZ1 1XNZA 3RORA 2BHCA 2GG7A 1WLRA 4U76A 1C22A 3MR1A 4U71A 1WY2A 5JI6A
chains in the Genus database with same CATH superfamily
1YVMA 4ZWPA 1MATA 4Z7MA 5CLSA 4FO7A 4KM3A 2OAZA 4U6JA 1XGSA 2NQ6A 2BWTA 3PKCA 2HOWA 3IU9A 3BIPA 2ADUA 1WL6A 3BITA 1KQ0A 2G6PA 1C27A 2Q93A 4A6VA 2BH3A 4U6WA 2V3YA 4FKCA 2GGCA 2GTXA 3PKBA 4QR8A 3FMQA 4S01A 4RZYA 1C24A 2V6CA 4U1BA 2EVCA 1PV9A 1XGOA 2BWXA 1M35A 3D27A 3MATA 2BWVA 2DFIA 5CE6A 5D6EA 3PKAA 5CDEA 2Q95A 2B3KA 2BB7A 2GU4A 1C23A 4ZNGA 2P98A 5CNXA 1C21A 3IU8A 2MATA 1WKMA 1YW9A 4S2TP 5CDLA 4IKSA 4S00A 1XGMA 3TB5A 4PV4A 1KQ9A 2OKNA 2GG2A 3FMRA 2BHBA 2Q96A 3CB5A 1QXZA 1QZYA 5FCFA 3BIQA 5JFRA 5JHUA 2EA4A 2GU7A 2V3ZA 4ZWOA 2GU6A 4IF7A 4U6EA 2V3XA 3IG4A 2BWWA 4R60A 4ZWUA 1R5HA 2BWSA 1B59A 2GG9A 1W7VA 2B3HA 2GG0A 1O0XA 2GA2A 1YJ3A 2EVOA 3CB6A 5CIKA 2P9AA 4FUKA 4IECA 1BN5A 2BHDA 2P99A 2GZ5A 1JAWA 1CHMA 4S2RP 4IKUA 2B3LA 2GG5A 4U73A 1WBQA 4MATA 3PKEA 1W2MA 3CTZA 1WN1A 4OOKA 4RZZA 1A16A 4PNCA 4U6CA 2GG8A 1KP0A 2BWUA 3S6BA 4EGEA 4FO8A 4IU6A 1BOAA 1XGNA 1N51A 2NQ7A 3FM3A 3L24A 1QXYA 1YW7A 1B6AA 4A6WA 4IKTA 1YW8A 2BWYA 2EA2A 2ZSGA 2GG3A 4FLLA 1R58A 1R5GA 5D6FA 4HXXA 5CDVA 2IW2A 5FCHA 3Q6DA 1QXWA 3PKDA 4IKRA 2Q94A 3IU7A 4FLIA 3L7GA 3MX6A 2BHAA 4U70A 5E5BA 4B28A 2Q92A 1Y1NA 4FLKA 2GU5A 3TAVA 4U6ZA 4IPAA 4FLJA 4JUQA 2GGBA 4U75A 2EVMA 3RVAA 4U69A 2Q8KA 2BN7A 1WL9A 4IDYA 4RGZ1 1XNZA 3RORA 2BHCA 2GG7A 1WLRA 4U76A 1C22A 3MR1A 4U71A 1WY2A 5JI6A
chains in the Genus database with same CATH topology
1YVMA 4ZWPA 1MATA 4Z7MA 5CLSA 4FO7A 4KM3A 2OAZA 4U6JA 1XGSA 2NQ6A 2BWTA 3PKCA 2HOWA 3IU9A 3BIPA 2ADUA 1WL6A 3BITA 1KQ0A 2G6PA 1C27A 2Q93A 4A6VA 2BH3A 4U6WA 2V3YA 4FKCA 2GGCA 2GTXA 3PKBA 4QR8A 3FMQA 4S01A 4RZYA 1C24A 2V6CA 4U1BA 2EVCA 1PV9A 1XGOA 2BWXA 1M35A 3D27A 3MATA 2BWVA 2DFIA 5CE6A 5D6EA 3PKAA 5CDEA 2Q95A 2B3KA 2BB7A 2GU4A 1C23A 4ZNGA 2P98A 5CNXA 1C21A 3IU8A 2MATA 1WKMA 1YW9A 4S2TP 5CDLA 4IKSA 4S00A 1XGMA 3TB5A 4PV4A 1KQ9A 2OKNA 2GG2A 3FMRA 2BHBA 2Q96A 3CB5A 1QXZA 1QZYA 5FCFA 3BIQA 5JFRA 5JHUA 2EA4A 2GU7A 2V3ZA 4ZWOA 2GU6A 4IF7A 4U6EA 2V3XA 3IG4A 2BWWA 4R60A 4ZWUA 1R5HA 2BWSA 1B59A 2GG9A 1W7VA 2B3HA 2GG0A 1O0XA 2GA2A 1YJ3A 2EVOA 3CB6A 5CIKA 2P9AA 4FUKA 4IECA 1BN5A 2BHDA 2P99A 2GZ5A 1JAWA 1CHMA 4S2RP 4IKUA 2B3LA 2GG5A 4U73A 1WBQA 4MATA 3PKEA 1W2MA 3CTZA 1WN1A 4OOKA 4RZZA 1A16A 4PNCA 4U6CA 2GG8A 1KP0A 2BWUA 3S6BA 4EGEA 4FO8A 4IU6A 1BOAA 1XGNA 1N51A 2NQ7A 3FM3A 3L24A 1QXYA 1YW7A 1B6AA 4A6WA 4IKTA 1YW8A 2BWYA 2EA2A 2ZSGA 2GG3A 4FLLA 1R58A 1R5GA 5D6FA 4HXXA 5CDVA 2IW2A 5FCHA 3Q6DA 1QXWA 3PKDA 4IKRA 2Q94A 3IU7A 4FLIA 3L7GA 3MX6A 2BHAA 4U70A 5E5BA 4B28A 2Q92A 1Y1NA 4FLKA 2GU5A 3TAVA 4U6ZA 4IPAA 4FLJA 4JUQA 2GGBA 4U75A 2EVMA 3RVAA 4U69A 2Q8KA 2BN7A 1WL9A 4IDYA 4RGZ1 1XNZA 3RORA 2BHCA 2GG7A 1WLRA 4U76A 1C22A 3MR1A 4U71A 1WY2A 5JI6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YVM A;  4ZWP A;  1MAT A;  4Z7M A;  5CLS A;  4FO7 A;  4KM3 A;  2OAZ A;  4U6J A;  1XGS A;  2NQ6 A;  2BWT A;  3PKC A;  2HOW A;  3IU9 A;  3BIP A;  2ADU A;  1WL6 A;  3BIT A;  1KQ0 A;  2G6P A;  1C27 A;  2Q93 A;  4A6V A;  2BH3 A;  4U6W A;  2V3Y A;  4FKC A;  2GGC A;  2GTX A;  3PKB A;  4QR8 A;  3FMQ A;  4S01 A;  4RZY A;  1C24 A;  2V6C A;  4U1B A;  2EVC A;  1PV9 A;  1XGO A;  2BWX A;  1M35 A;  3D27 A;  3MAT A;  2BWV A;  2DFI A;  5CE6 A;  5D6E A;  3PKA A;  5CDE A;  2Q95 A;  2B3K A;  2BB7 A;  2GU4 A;  1C23 A;  4ZNG A;  2P98 A;  5CNX A;  1C21 A;  3IU8 A;  2MAT A;  1WKM A;  1YW9 A;  4S2T P;  5CDL A;  4IKS A;  4S00 A;  1XGM A;  3TB5 A;  4PV4 A;  1KQ9 A;  2OKN A;  2GG2 A;  3FMR A;  2BHB A;  2Q96 A;  3CB5 A;  1QXZ A;  1QZY A;  5FCF A;  3BIQ A;  5JFR A;  5JHU A;  2EA4 A;  2GU7 A;  2V3Z A;  4ZWO A;  2GU6 A;  4IF7 A;  4U6E A;  2V3X A;  3IG4 A;  2BWW A;  4R60 A;  4ZWU A;  1R5H A;  2BWS A;  1B59 A;  2GG9 A;  1W7V A;  2B3H A;  2GG0 A;  1O0X A;  2GA2 A;  1YJ3 A;  2EVO A;  3CB6 A;  5CIK A;  2P9A A;  4FUK A;  4IEC A;  1BN5 A;  2BHD A;  2P99 A;  2GZ5 A;  1JAW A;  1CHM A;  4S2R P;  4IKU A;  2B3L A;  2GG5 A;  4U73 A;  1WBQ A;  4MAT A;  3PKE A;  1W2M A;  3CTZ A;  1WN1 A;  4OOK A;  4RZZ A;  1A16 A;  4PNC A;  4U6C A;  2GG8 A;  1KP0 A;  2BWU A;  3S6B A;  4EGE A;  4FO8 A;  4IU6 A;  1BOA A;  1XGN A;  1N51 A;  2NQ7 A;  3FM3 A;  3L24 A;  1QXY A;  1YW7 A;  1B6A A;  4A6W A;  4IKT A;  1YW8 A;  2BWY A;  2EA2 A;  2ZSG A;  2GG3 A;  4FLL A;  1R58 A;  1R5G A;  5D6F A;  4HXX A;  5CDV A;  2IW2 A;  5FCH A;  3Q6D A;  1QXW A;  3PKD A;  4IKR A;  2Q94 A;  3IU7 A;  4FLI A;  3L7G A;  3MX6 A;  2BHA A;  4U70 A;  5E5B A;  4B28 A;  2Q92 A;  1Y1N A;  4FLK A;  2GU5 A;  3TAV A;  4U6Z A;  4IPA A;  4FLJ A;  4JUQ A;  2GGB A;  4U75 A;  2EVM A;  3RVA A;  4U69 A;  2Q8K A;  2BN7 A;  1WL9 A;  4IDY A;  4RGZ 1;  1XNZ A;  3ROR A;  2BHC A;  2GG7 A;  1WLR A;  4U76 A;  1C22 A;  3MR1 A;  4U71 A;  1WY2 A;  5JI6 A; 
#chains in the Genus database with same CATH topology
 1YVM A;  4ZWP A;  1MAT A;  4Z7M A;  5CLS A;  4FO7 A;  4KM3 A;  2OAZ A;  4U6J A;  1XGS A;  2NQ6 A;  2BWT A;  3PKC A;  2HOW A;  3IU9 A;  3BIP A;  2ADU A;  1WL6 A;  3BIT A;  1KQ0 A;  2G6P A;  1C27 A;  2Q93 A;  4A6V A;  2BH3 A;  4U6W A;  2V3Y A;  4FKC A;  2GGC A;  2GTX A;  3PKB A;  4QR8 A;  3FMQ A;  4S01 A;  4RZY A;  1C24 A;  2V6C A;  4U1B A;  2EVC A;  1PV9 A;  1XGO A;  2BWX A;  1M35 A;  3D27 A;  3MAT A;  2BWV A;  2DFI A;  5CE6 A;  5D6E A;  3PKA A;  5CDE A;  2Q95 A;  2B3K A;  2BB7 A;  2GU4 A;  1C23 A;  4ZNG A;  2P98 A;  5CNX A;  1C21 A;  3IU8 A;  2MAT A;  1WKM A;  1YW9 A;  4S2T P;  5CDL A;  4IKS A;  4S00 A;  1XGM A;  3TB5 A;  4PV4 A;  1KQ9 A;  2OKN A;  2GG2 A;  3FMR A;  2BHB A;  2Q96 A;  3CB5 A;  1QXZ A;  1QZY A;  5FCF A;  3BIQ A;  5JFR A;  5JHU A;  2EA4 A;  2GU7 A;  2V3Z A;  4ZWO A;  2GU6 A;  4IF7 A;  4U6E A;  2V3X A;  3IG4 A;  2BWW A;  4R60 A;  4ZWU A;  1R5H A;  2BWS A;  1B59 A;  2GG9 A;  1W7V A;  2B3H A;  2GG0 A;  1O0X A;  2GA2 A;  1YJ3 A;  2EVO A;  3CB6 A;  5CIK A;  2P9A A;  4FUK A;  4IEC A;  1BN5 A;  2BHD A;  2P99 A;  2GZ5 A;  1JAW A;  1CHM A;  4S2R P;  4IKU A;  2B3L A;  2GG5 A;  4U73 A;  1WBQ A;  4MAT A;  3PKE A;  1W2M A;  3CTZ A;  1WN1 A;  4OOK A;  4RZZ A;  1A16 A;  4PNC A;  4U6C A;  2GG8 A;  1KP0 A;  2BWU A;  3S6B A;  4EGE A;  4FO8 A;  4IU6 A;  1BOA A;  1XGN A;  1N51 A;  2NQ7 A;  3FM3 A;  3L24 A;  1QXY A;  1YW7 A;  1B6A A;  4A6W A;  4IKT A;  1YW8 A;  2BWY A;  2EA2 A;  2ZSG A;  2GG3 A;  4FLL A;  1R58 A;  1R5G A;  5D6F A;  4HXX A;  5CDV A;  2IW2 A;  5FCH A;  3Q6D A;  1QXW A;  3PKD A;  4IKR A;  2Q94 A;  3IU7 A;  4FLI A;  3L7G A;  3MX6 A;  2BHA A;  4U70 A;  5E5B A;  4B28 A;  2Q92 A;  1Y1N A;  4FLK A;  2GU5 A;  3TAV A;  4U6Z A;  4IPA A;  4FLJ A;  4JUQ A;  2GGB A;  4U75 A;  2EVM A;  3RVA A;  4U69 A;  2Q8K A;  2BN7 A;  1WL9 A;  4IDY A;  4RGZ 1;  1XNZ A;  3ROR A;  2BHC A;  2GG7 A;  1WLR A;  4U76 A;  1C22 A;  3MR1 A;  4U71 A;  1WY2 A;  5JI6 A; 
#chains in the Genus database with same CATH homology
 1YVM A;  4ZWP A;  1MAT A;  4Z7M A;  5CLS A;  4FO7 A;  4KM3 A;  2OAZ A;  4U6J A;  1XGS A;  2NQ6 A;  2BWT A;  3PKC A;  2HOW A;  3IU9 A;  3BIP A;  2ADU A;  1WL6 A;  3BIT A;  1KQ0 A;  2G6P A;  1C27 A;  2Q93 A;  4A6V A;  2BH3 A;  4U6W A;  2V3Y A;  4FKC A;  2GGC A;  2GTX A;  3PKB A;  4QR8 A;  3FMQ A;  4S01 A;  4RZY A;  1C24 A;  2V6C A;  4U1B A;  2EVC A;  1PV9 A;  1XGO A;  2BWX A;  1M35 A;  3D27 A;  3MAT A;  2BWV A;  2DFI A;  5CE6 A;  5D6E A;  3PKA A;  5CDE A;  2Q95 A;  2B3K A;  2BB7 A;  2GU4 A;  1C23 A;  4ZNG A;  2P98 A;  5CNX A;  1C21 A;  3IU8 A;  2MAT A;  1WKM A;  1YW9 A;  4S2T P;  5CDL A;  4IKS A;  4S00 A;  1XGM A;  3TB5 A;  4PV4 A;  1KQ9 A;  2OKN A;  2GG2 A;  3FMR A;  2BHB A;  2Q96 A;  3CB5 A;  1QXZ A;  1QZY A;  5FCF A;  3BIQ A;  5JFR A;  5JHU A;  2EA4 A;  2GU7 A;  2V3Z A;  4ZWO A;  2GU6 A;  4IF7 A;  4U6E A;  2V3X A;  3IG4 A;  2BWW A;  4R60 A;  4ZWU A;  1R5H A;  2BWS A;  1B59 A;  2GG9 A;  1W7V A;  2B3H A;  2GG0 A;  1O0X A;  2GA2 A;  1YJ3 A;  2EVO A;  3CB6 A;  5CIK A;  2P9A A;  4FUK A;  4IEC A;  1BN5 A;  2BHD A;  2P99 A;  2GZ5 A;  1JAW A;  1CHM A;  4S2R P;  4IKU A;  2B3L A;  2GG5 A;  4U73 A;  1WBQ A;  4MAT A;  3PKE A;  1W2M A;  3CTZ A;  1WN1 A;  4OOK A;  4RZZ A;  1A16 A;  4PNC A;  4U6C A;  2GG8 A;  1KP0 A;  2BWU A;  3S6B A;  4EGE A;  4FO8 A;  4IU6 A;  1BOA A;  1XGN A;  1N51 A;  2NQ7 A;  3FM3 A;  3L24 A;  1QXY A;  1YW7 A;  1B6A A;  4A6W A;  4IKT A;  1YW8 A;  2BWY A;  2EA2 A;  2ZSG A;  2GG3 A;  4FLL A;  1R58 A;  1R5G A;  5D6F A;  4HXX A;  5CDV A;  2IW2 A;  5FCH A;  3Q6D A;  1QXW A;  3PKD A;  4IKR A;  2Q94 A;  3IU7 A;  4FLI A;  3L7G A;  3MX6 A;  2BHA A;  4U70 A;  5E5B A;  4B28 A;  2Q92 A;  1Y1N A;  4FLK A;  2GU5 A;  3TAV A;  4U6Z A;  4IPA A;  4FLJ A;  4JUQ A;  2GGB A;  4U75 A;  2EVM A;  3RVA A;  4U69 A;  2Q8K A;  2BN7 A;  1WL9 A;  4IDY A;  4RGZ 1;  1XNZ A;  3ROR A;  2BHC A;  2GG7 A;  1WLR A;  4U76 A;  1C22 A;  3MR1 A;  4U71 A;  1WY2 A;  5JI6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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