4IECA

Cys105 covalent modification by 2-hydroxyethyl disulfide in mycobacterium tuberculosis methionine aminopeptidase type 1c
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
282
structure length
280
Chain Sequence
RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Mycobacterium tuberculosis
publication title Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents
pubmed doi rcsb
molecule keywords Methionine aminopeptidase 2
total genus 86
structure length 280
sequence length 282
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2012-12-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4iecA01
3S6BA 1N51A 2GG9A 1WY2A 3MR1A 4IF7A 1R58A 2GTXA 1WN1A 5CDLA 4U76A 4Z7MA 4PNCA 2ADUA 5JFRA 3L24A 4U75A 2BWVA 2V3ZA 4S2RP 2DFIA 2B3LA 4R60A 3RVAA 2Q93A 4FO7A 2GU6A 1PV9A 3BIQA 4U73A 2GU4A 4IKSA 2EA4A 4IECA 4FLIA 1M35A 1BN5A 2BWUA 2BH3A 4IKRA 2V3XA 4A6VA 5JHUA 2EA2A 1QXZA 1WL9A 3RORA 2OAZA 1A16A 4ZWOA 2V3YA 3IU7A 1B59A 2MATA 4FKCA 3FMQA 5CNXA 4ZNGA 1YW8A 5FCHA 1C22A 1YW9A 2P9AA 4FLJA 2BHBA 2HOWA 2GG8A 5D6FA 1B6AA 1XGOA 2BHAA 1KQ9A 1QZYA 5CDEA 4U6JA 1O0XA 4IU6A 3IU8A 2Q96A 5CDVA 1WBQA 1WKMA 4U6EA 5CIKA 3PKEA 3Q6DA 4S00A 1KQ0A 4U6WA 3TAVA 4FLKA 5CE6A 2GGBA 3CB6A 3PKAA 4IDYA 2BHCA 1C24A 4RZYA 1BOAA 3BITA 4U71A 2NQ7A 1YVMA 4QR8A 1CHMA 2EVOA 4FO8A 3PKCA 4OOKA 1MATA 2BHDA 1WL6A 2BWTA 2IW2A 4FLLA 4IPAA 2GG7A 1C21A 5CLSA 1YW7A 1QXWA 4U6CA 3CB5A 4EGEA 2P98A 5E5BA 4KM3A 3BIPA 1WLRA 3L7GA 4U6ZA 1XNZA 2GG0A 2BWWA 2BWXA 4MATA 2EVCA 3PKDA 4FUKA 3CTZA 4RGZ1 4A6WA 5FCFA 2GU5A 2G6PA 1KP0A 2BWYA 4IKUA 3MX6A 3D27A 4U69A 1JAWA 4ZWPA 1W7VA 1XGSA 2BB7A 2GG5A 4ZWUA 1XGNA 4S2TP 1R5GA 2BN7A 2GG3A 3MATA 3PKBA 4S01A 1C23A 4B28A 2ZSGA 1W2MA 2GGCA 2GA2A 2OKNA 3IU9A 1Y1NA 3FM3A 1C27A 4U70A 2EVMA 1R5HA 3TB5A 2B3KA 2GU7A 1QXYA 2P99A 5D6EA 4JUQA 4PV4A 4RZZA 2NQ6A 2BWSA 2Q95A 2Q92A 2V6CA 2GG2A 3IG4A 3FMRA 5JI6A 4IKTA 1YJ3A 2B3HA 2Q94A 4HXXA 1XGMA 2GZ5A 2Q8KA 4U1BA
chains in the Genus database with same CATH superfamily
3S6BA 1N51A 2GG9A 1WY2A 3MR1A 4IF7A 1R58A 2GTXA 1WN1A 5CDLA 4U76A 4Z7MA 4PNCA 2ADUA 5JFRA 3L24A 4U75A 2BWVA 2V3ZA 4S2RP 2DFIA 2B3LA 4R60A 3RVAA 2Q93A 4FO7A 2GU6A 1PV9A 3BIQA 4U73A 2GU4A 4IKSA 2EA4A 4IECA 4FLIA 1M35A 1BN5A 2BWUA 2BH3A 4IKRA 2V3XA 4A6VA 5JHUA 2EA2A 1QXZA 1WL9A 3RORA 2OAZA 1A16A 4ZWOA 2V3YA 3IU7A 1B59A 2MATA 4FKCA 3FMQA 5CNXA 4ZNGA 1YW8A 5FCHA 1C22A 1YW9A 2P9AA 4FLJA 2BHBA 2HOWA 2GG8A 5D6FA 1B6AA 1XGOA 2BHAA 1KQ9A 1QZYA 5CDEA 4U6JA 1O0XA 4IU6A 3IU8A 2Q96A 5CDVA 1WBQA 1WKMA 4U6EA 5CIKA 3PKEA 3Q6DA 4S00A 1KQ0A 4U6WA 3TAVA 4FLKA 5CE6A 2GGBA 3CB6A 3PKAA 4IDYA 2BHCA 1C24A 4RZYA 1BOAA 3BITA 4U71A 2NQ7A 1YVMA 4QR8A 1CHMA 2EVOA 4FO8A 3PKCA 4OOKA 1MATA 2BHDA 1WL6A 2BWTA 2IW2A 4FLLA 4IPAA 2GG7A 1C21A 5CLSA 1YW7A 1QXWA 4U6CA 3CB5A 4EGEA 2P98A 5E5BA 4KM3A 3BIPA 1WLRA 3L7GA 4U6ZA 1XNZA 2GG0A 2BWWA 2BWXA 4MATA 2EVCA 3PKDA 4FUKA 3CTZA 4RGZ1 4A6WA 5FCFA 2GU5A 2G6PA 1KP0A 2BWYA 4IKUA 3MX6A 3D27A 4U69A 1JAWA 4ZWPA 1W7VA 1XGSA 2BB7A 2GG5A 4ZWUA 1XGNA 4S2TP 1R5GA 2BN7A 2GG3A 3MATA 3PKBA 4S01A 1C23A 4B28A 2ZSGA 1W2MA 2GGCA 2GA2A 2OKNA 3IU9A 1Y1NA 3FM3A 1C27A 4U70A 2EVMA 1R5HA 3TB5A 2B3KA 2GU7A 1QXYA 2P99A 5D6EA 4JUQA 4PV4A 4RZZA 2NQ6A 2BWSA 2Q95A 2Q92A 2V6CA 2GG2A 3IG4A 3FMRA 5JI6A 4IKTA 1YJ3A 2B3HA 2Q94A 4HXXA 1XGMA 2GZ5A 2Q8KA 4U1BA
chains in the Genus database with same CATH topology
3S6BA 1N51A 2GG9A 1WY2A 3MR1A 4IF7A 1R58A 2GTXA 1WN1A 5CDLA 4U76A 4Z7MA 4PNCA 2ADUA 5JFRA 3L24A 4U75A 2BWVA 2V3ZA 4S2RP 2DFIA 2B3LA 4R60A 3RVAA 2Q93A 4FO7A 2GU6A 1PV9A 3BIQA 4U73A 2GU4A 4IKSA 2EA4A 4IECA 4FLIA 1M35A 1BN5A 2BWUA 2BH3A 4IKRA 2V3XA 4A6VA 5JHUA 2EA2A 1QXZA 1WL9A 3RORA 2OAZA 1A16A 4ZWOA 2V3YA 3IU7A 1B59A 2MATA 4FKCA 3FMQA 5CNXA 4ZNGA 1YW8A 5FCHA 1C22A 1YW9A 2P9AA 4FLJA 2BHBA 2HOWA 2GG8A 5D6FA 1B6AA 1XGOA 2BHAA 1KQ9A 1QZYA 5CDEA 4U6JA 1O0XA 4IU6A 3IU8A 2Q96A 5CDVA 1WBQA 1WKMA 4U6EA 5CIKA 3PKEA 3Q6DA 4S00A 1KQ0A 4U6WA 3TAVA 4FLKA 5CE6A 2GGBA 3CB6A 3PKAA 4IDYA 2BHCA 1C24A 4RZYA 1BOAA 3BITA 4U71A 2NQ7A 1YVMA 4QR8A 1CHMA 2EVOA 4FO8A 3PKCA 4OOKA 1MATA 2BHDA 1WL6A 2BWTA 2IW2A 4FLLA 4IPAA 2GG7A 1C21A 5CLSA 1YW7A 1QXWA 4U6CA 3CB5A 4EGEA 2P98A 5E5BA 4KM3A 3BIPA 1WLRA 3L7GA 4U6ZA 1XNZA 2GG0A 2BWWA 2BWXA 4MATA 2EVCA 3PKDA 4FUKA 3CTZA 4RGZ1 4A6WA 5FCFA 2GU5A 2G6PA 1KP0A 2BWYA 4IKUA 3MX6A 3D27A 4U69A 1JAWA 4ZWPA 1W7VA 1XGSA 2BB7A 2GG5A 4ZWUA 1XGNA 4S2TP 1R5GA 2BN7A 2GG3A 3MATA 3PKBA 4S01A 1C23A 4B28A 2ZSGA 1W2MA 2GGCA 2GA2A 2OKNA 3IU9A 1Y1NA 3FM3A 1C27A 4U70A 2EVMA 1R5HA 3TB5A 2B3KA 2GU7A 1QXYA 2P99A 5D6EA 4JUQA 4PV4A 4RZZA 2NQ6A 2BWSA 2Q95A 2Q92A 2V6CA 2GG2A 3IG4A 3FMRA 5JI6A 4IKTA 1YJ3A 2B3HA 2Q94A 4HXXA 1XGMA 2GZ5A 2Q8KA 4U1BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S6B A;  1N51 A;  2GG9 A;  1WY2 A;  3MR1 A;  4IF7 A;  1R58 A;  2GTX A;  1WN1 A;  5CDL A;  4U76 A;  4Z7M A;  4PNC A;  2ADU A;  5JFR A;  3L24 A;  4U75 A;  2BWV A;  2V3Z A;  4S2R P;  2DFI A;  2B3L A;  4R60 A;  3RVA A;  2Q93 A;  4FO7 A;  2GU6 A;  1PV9 A;  3BIQ A;  4U73 A;  2GU4 A;  4IKS A;  2EA4 A;  4IEC A;  4FLI A;  1M35 A;  1BN5 A;  2BWU A;  2BH3 A;  4IKR A;  2V3X A;  4A6V A;  5JHU A;  2EA2 A;  1QXZ A;  1WL9 A;  3ROR A;  2OAZ A;  1A16 A;  4ZWO A;  2V3Y A;  3IU7 A;  1B59 A;  2MAT A;  4FKC A;  3FMQ A;  5CNX A;  4ZNG A;  1YW8 A;  5FCH A;  1C22 A;  1YW9 A;  2P9A A;  4FLJ A;  2BHB A;  2HOW A;  2GG8 A;  5D6F A;  1B6A A;  1XGO A;  2BHA A;  1KQ9 A;  1QZY A;  5CDE A;  4U6J A;  1O0X A;  4IU6 A;  3IU8 A;  2Q96 A;  5CDV A;  1WBQ A;  1WKM A;  4U6E A;  5CIK A;  3PKE A;  3Q6D A;  4S00 A;  1KQ0 A;  4U6W A;  3TAV A;  4FLK A;  5CE6 A;  2GGB A;  3CB6 A;  3PKA A;  4IDY A;  2BHC A;  1C24 A;  4RZY A;  1BOA A;  3BIT A;  4U71 A;  2NQ7 A;  1YVM A;  4QR8 A;  1CHM A;  2EVO A;  4FO8 A;  3PKC A;  4OOK A;  1MAT A;  2BHD A;  1WL6 A;  2BWT A;  2IW2 A;  4FLL A;  4IPA A;  2GG7 A;  1C21 A;  5CLS A;  1YW7 A;  1QXW A;  4U6C A;  3CB5 A;  4EGE A;  2P98 A;  5E5B A;  4KM3 A;  3BIP A;  1WLR A;  3L7G A;  4U6Z A;  1XNZ A;  2GG0 A;  2BWW A;  2BWX A;  4MAT A;  2EVC A;  3PKD A;  4FUK A;  3CTZ A;  4RGZ 1;  4A6W A;  5FCF A;  2GU5 A;  2G6P A;  1KP0 A;  2BWY A;  4IKU A;  3MX6 A;  3D27 A;  4U69 A;  1JAW A;  4ZWP A;  1W7V A;  1XGS A;  2BB7 A;  2GG5 A;  4ZWU A;  1XGN A;  4S2T P;  1R5G A;  2BN7 A;  2GG3 A;  3MAT A;  3PKB A;  4S01 A;  1C23 A;  4B28 A;  2ZSG A;  1W2M A;  2GGC A;  2GA2 A;  2OKN A;  3IU9 A;  1Y1N A;  3FM3 A;  1C27 A;  4U70 A;  2EVM A;  1R5H A;  3TB5 A;  2B3K A;  2GU7 A;  1QXY A;  2P99 A;  5D6E A;  4JUQ A;  4PV4 A;  4RZZ A;  2NQ6 A;  2BWS A;  2Q95 A;  2Q92 A;  2V6C A;  2GG2 A;  3IG4 A;  3FMR A;  5JI6 A;  4IKT A;  1YJ3 A;  2B3H A;  2Q94 A;  4HXX A;  1XGM A;  2GZ5 A;  2Q8K A;  4U1B A; 
#chains in the Genus database with same CATH topology
 3S6B A;  1N51 A;  2GG9 A;  1WY2 A;  3MR1 A;  4IF7 A;  1R58 A;  2GTX A;  1WN1 A;  5CDL A;  4U76 A;  4Z7M A;  4PNC A;  2ADU A;  5JFR A;  3L24 A;  4U75 A;  2BWV A;  2V3Z A;  4S2R P;  2DFI A;  2B3L A;  4R60 A;  3RVA A;  2Q93 A;  4FO7 A;  2GU6 A;  1PV9 A;  3BIQ A;  4U73 A;  2GU4 A;  4IKS A;  2EA4 A;  4IEC A;  4FLI A;  1M35 A;  1BN5 A;  2BWU A;  2BH3 A;  4IKR A;  2V3X A;  4A6V A;  5JHU A;  2EA2 A;  1QXZ A;  1WL9 A;  3ROR A;  2OAZ A;  1A16 A;  4ZWO A;  2V3Y A;  3IU7 A;  1B59 A;  2MAT A;  4FKC A;  3FMQ A;  5CNX A;  4ZNG A;  1YW8 A;  5FCH A;  1C22 A;  1YW9 A;  2P9A A;  4FLJ A;  2BHB A;  2HOW A;  2GG8 A;  5D6F A;  1B6A A;  1XGO A;  2BHA A;  1KQ9 A;  1QZY A;  5CDE A;  4U6J A;  1O0X A;  4IU6 A;  3IU8 A;  2Q96 A;  5CDV A;  1WBQ A;  1WKM A;  4U6E A;  5CIK A;  3PKE A;  3Q6D A;  4S00 A;  1KQ0 A;  4U6W A;  3TAV A;  4FLK A;  5CE6 A;  2GGB A;  3CB6 A;  3PKA A;  4IDY A;  2BHC A;  1C24 A;  4RZY A;  1BOA A;  3BIT A;  4U71 A;  2NQ7 A;  1YVM A;  4QR8 A;  1CHM A;  2EVO A;  4FO8 A;  3PKC A;  4OOK A;  1MAT A;  2BHD A;  1WL6 A;  2BWT A;  2IW2 A;  4FLL A;  4IPA A;  2GG7 A;  1C21 A;  5CLS A;  1YW7 A;  1QXW A;  4U6C A;  3CB5 A;  4EGE A;  2P98 A;  5E5B A;  4KM3 A;  3BIP A;  1WLR A;  3L7G A;  4U6Z A;  1XNZ A;  2GG0 A;  2BWW A;  2BWX A;  4MAT A;  2EVC A;  3PKD A;  4FUK A;  3CTZ A;  4RGZ 1;  4A6W A;  5FCF A;  2GU5 A;  2G6P A;  1KP0 A;  2BWY A;  4IKU A;  3MX6 A;  3D27 A;  4U69 A;  1JAW A;  4ZWP A;  1W7V A;  1XGS A;  2BB7 A;  2GG5 A;  4ZWU A;  1XGN A;  4S2T P;  1R5G A;  2BN7 A;  2GG3 A;  3MAT A;  3PKB A;  4S01 A;  1C23 A;  4B28 A;  2ZSG A;  1W2M A;  2GGC A;  2GA2 A;  2OKN A;  3IU9 A;  1Y1N A;  3FM3 A;  1C27 A;  4U70 A;  2EVM A;  1R5H A;  3TB5 A;  2B3K A;  2GU7 A;  1QXY A;  2P99 A;  5D6E A;  4JUQ A;  4PV4 A;  4RZZ A;  2NQ6 A;  2BWS A;  2Q95 A;  2Q92 A;  2V6C A;  2GG2 A;  3IG4 A;  3FMR A;  5JI6 A;  4IKT A;  1YJ3 A;  2B3H A;  2Q94 A;  4HXX A;  1XGM A;  2GZ5 A;  2Q8K A;  4U1B A; 
#chains in the Genus database with same CATH homology
 3S6B A;  1N51 A;  2GG9 A;  1WY2 A;  3MR1 A;  4IF7 A;  1R58 A;  2GTX A;  1WN1 A;  5CDL A;  4U76 A;  4Z7M A;  4PNC A;  2ADU A;  5JFR A;  3L24 A;  4U75 A;  2BWV A;  2V3Z A;  4S2R P;  2DFI A;  2B3L A;  4R60 A;  3RVA A;  2Q93 A;  4FO7 A;  2GU6 A;  1PV9 A;  3BIQ A;  4U73 A;  2GU4 A;  4IKS A;  2EA4 A;  4IEC A;  4FLI A;  1M35 A;  1BN5 A;  2BWU A;  2BH3 A;  4IKR A;  2V3X A;  4A6V A;  5JHU A;  2EA2 A;  1QXZ A;  1WL9 A;  3ROR A;  2OAZ A;  1A16 A;  4ZWO A;  2V3Y A;  3IU7 A;  1B59 A;  2MAT A;  4FKC A;  3FMQ A;  5CNX A;  4ZNG A;  1YW8 A;  5FCH A;  1C22 A;  1YW9 A;  2P9A A;  4FLJ A;  2BHB A;  2HOW A;  2GG8 A;  5D6F A;  1B6A A;  1XGO A;  2BHA A;  1KQ9 A;  1QZY A;  5CDE A;  4U6J A;  1O0X A;  4IU6 A;  3IU8 A;  2Q96 A;  5CDV A;  1WBQ A;  1WKM A;  4U6E A;  5CIK A;  3PKE A;  3Q6D A;  4S00 A;  1KQ0 A;  4U6W A;  3TAV A;  4FLK A;  5CE6 A;  2GGB A;  3CB6 A;  3PKA A;  4IDY A;  2BHC A;  1C24 A;  4RZY A;  1BOA A;  3BIT A;  4U71 A;  2NQ7 A;  1YVM A;  4QR8 A;  1CHM A;  2EVO A;  4FO8 A;  3PKC A;  4OOK A;  1MAT A;  2BHD A;  1WL6 A;  2BWT A;  2IW2 A;  4FLL A;  4IPA A;  2GG7 A;  1C21 A;  5CLS A;  1YW7 A;  1QXW A;  4U6C A;  3CB5 A;  4EGE A;  2P98 A;  5E5B A;  4KM3 A;  3BIP A;  1WLR A;  3L7G A;  4U6Z A;  1XNZ A;  2GG0 A;  2BWW A;  2BWX A;  4MAT A;  2EVC A;  3PKD A;  4FUK A;  3CTZ A;  4RGZ 1;  4A6W A;  5FCF A;  2GU5 A;  2G6P A;  1KP0 A;  2BWY A;  4IKU A;  3MX6 A;  3D27 A;  4U69 A;  1JAW A;  4ZWP A;  1W7V A;  1XGS A;  2BB7 A;  2GG5 A;  4ZWU A;  1XGN A;  4S2T P;  1R5G A;  2BN7 A;  2GG3 A;  3MAT A;  3PKB A;  4S01 A;  1C23 A;  4B28 A;  2ZSG A;  1W2M A;  2GGC A;  2GA2 A;  2OKN A;  3IU9 A;  1Y1N A;  3FM3 A;  1C27 A;  4U70 A;  2EVM A;  1R5H A;  3TB5 A;  2B3K A;  2GU7 A;  1QXY A;  2P99 A;  5D6E A;  4JUQ A;  4PV4 A;  4RZZ A;  2NQ6 A;  2BWS A;  2Q95 A;  2Q92 A;  2V6C A;  2GG2 A;  3IG4 A;  3FMR A;  5JI6 A;  4IKT A;  1YJ3 A;  2B3H A;  2Q94 A;  4HXX A;  1XGM A;  2GZ5 A;  2Q8K A;  4U1B A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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