4A6VA

X-ray structures of oxazole hydroxamate ecmetap-mn complexes
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
264
structure length
264
Chain Sequence
AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords METHIONINE AMINOPEPTIDASE
publication title Hydroxamic Acids as Potent Inhibitors of Fe(II) and Mn(II) E. Coli Methionine Aminopeptidase: Biological Activities and X-Ray Structures of Oxazole Hydroxamate-Ecmetap-Mn Complexes.
pubmed doi rcsb
molecule tags Hydrolase
total genus 86
structure length 264
sequence length 264
chains with identical sequence B
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2011-11-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4a6vA00
1WBQA 3BIQA 4JUQA 3BIPA 4U76A 4S2TP 2BH3A 5CDLA 3IU7A 2V6CA 3CB6A 3FMQA 4U75A 1XGNA 2V3XA 4RZZA 1WKMA 1WY2A 2V3YA 2G6PA 2GU6A 2MATA 2B3HA 1BOAA 2GU7A 5JFRA 4S2RP 1CHMA 1QZYA 1R5GA 1W7VA 5CE6A 4U71A 2EA2A 2GG0A 4ZNGA 4IKUA 3IU8A 3TAVA 1YVMA 4S00A 4MATA 4A6VA 3FMRA 2GG7A 1KP0A 3TB5A 4FUKA 2GA2A 1KQ9A 2NQ6A 1B59A 2GU4A 2HOWA 2GU5A 4U6ZA 2Q95A 4S01A 1C24A 2Q96A 5CLSA 1WL9A 5CDEA 4OOKA 4U70A 2BB7A 5D6EA 2P99A 3D27A 2BWUA 3MX6A 4IDYA 4IPAA 1O0XA 1R58A 2BWXA 1XNZA 2BHBA 4IECA 4U6CA 5CDVA 4RZYA 4R60A 3RVAA 3PKCA 1C23A 5D6FA 4PNCA 4ZWUA 1XGSA 2GG2A 3FM3A 3MR1A 4IKSA 2GGCA 2EVMA 2BHDA 2OAZA 4QR8A 5E5BA 2Q8KA 4U73A 3CB5A 4U6EA 3MATA 4FLLA 2OKNA 4FLIA 4HXXA 3PKBA 4FO8A 4FLJA 4U69A 2Q94A 3S6BA 1WL6A 4A6WA 1M35A 3L24A 1BN5A 1XGMA 1MATA 1WN1A 1YW9A 2GGBA 4FKCA 1YJ3A 2B3KA 5CNXA 4ZWPA 3PKAA 1KQ0A 3PKEA 5FCFA 2BWTA 2BN7A 2NQ7A 4U1BA 2GTXA 3IU9A 2GG8A 3Q6DA 2ZSGA 5JI6A 4IKTA 5CIKA 2B3LA 2ADUA 4EGEA 4FO7A 1QXYA 1JAWA 5JHUA 1PV9A 2GZ5A 2P98A 1C27A 4Z7MA 2DFIA 1YW8A 3RORA 2P9AA 5FCHA 2EA4A 1C22A 2Q92A 2BHAA 4PV4A 4FLKA 2GG3A 3BITA 3CTZA 4KM3A 4U6JA 1QXZA 1W2MA 2BWWA 2IW2A 1R5HA 2GG5A 1Y1NA 2BHCA 2GG9A 2EVOA 4RGZ1 3IG4A 4U6WA 3L7GA 2Q93A 4IU6A 1N51A 1XGOA 4IF7A 2EVCA 1C21A 1QXWA 2V3ZA 1B6AA 1WLRA 1A16A 1YW7A 2BWYA 2BWVA 4IKRA 3PKDA 4ZWOA 4B28A 2BWSA
chains in the Genus database with same CATH superfamily
1WBQA 3BIQA 4JUQA 3BIPA 4U76A 4S2TP 2BH3A 5CDLA 3IU7A 2V6CA 3CB6A 3FMQA 4U75A 1XGNA 2V3XA 4RZZA 1WKMA 1WY2A 2V3YA 2G6PA 2GU6A 2MATA 2B3HA 1BOAA 2GU7A 5JFRA 4S2RP 1CHMA 1QZYA 1R5GA 1W7VA 5CE6A 4U71A 2EA2A 2GG0A 4ZNGA 4IKUA 3IU8A 3TAVA 1YVMA 4S00A 4MATA 4A6VA 3FMRA 2GG7A 1KP0A 3TB5A 4FUKA 2GA2A 1KQ9A 2NQ6A 1B59A 2GU4A 2HOWA 2GU5A 4U6ZA 2Q95A 4S01A 1C24A 2Q96A 5CLSA 1WL9A 5CDEA 4OOKA 4U70A 2BB7A 5D6EA 2P99A 3D27A 2BWUA 3MX6A 4IDYA 4IPAA 1O0XA 1R58A 2BWXA 1XNZA 2BHBA 4IECA 4U6CA 5CDVA 4RZYA 4R60A 3RVAA 3PKCA 1C23A 5D6FA 4PNCA 4ZWUA 1XGSA 2GG2A 3FM3A 3MR1A 4IKSA 2GGCA 2EVMA 2BHDA 2OAZA 4QR8A 5E5BA 2Q8KA 4U73A 3CB5A 4U6EA 3MATA 4FLLA 2OKNA 4FLIA 4HXXA 3PKBA 4FO8A 4FLJA 4U69A 2Q94A 3S6BA 1WL6A 4A6WA 1M35A 3L24A 1BN5A 1XGMA 1MATA 1WN1A 1YW9A 2GGBA 4FKCA 1YJ3A 2B3KA 5CNXA 4ZWPA 3PKAA 1KQ0A 3PKEA 5FCFA 2BWTA 2BN7A 2NQ7A 4U1BA 2GTXA 3IU9A 2GG8A 3Q6DA 2ZSGA 5JI6A 4IKTA 5CIKA 2B3LA 2ADUA 4EGEA 4FO7A 1QXYA 1JAWA 5JHUA 1PV9A 2GZ5A 2P98A 1C27A 4Z7MA 2DFIA 1YW8A 3RORA 2P9AA 5FCHA 2EA4A 1C22A 2Q92A 2BHAA 4PV4A 4FLKA 2GG3A 3BITA 3CTZA 4KM3A 4U6JA 1QXZA 1W2MA 2BWWA 2IW2A 1R5HA 2GG5A 1Y1NA 2BHCA 2GG9A 2EVOA 4RGZ1 3IG4A 4U6WA 3L7GA 2Q93A 4IU6A 1N51A 1XGOA 4IF7A 2EVCA 1C21A 1QXWA 2V3ZA 1B6AA 1WLRA 1A16A 1YW7A 2BWYA 2BWVA 4IKRA 3PKDA 4ZWOA 4B28A 2BWSA
chains in the Genus database with same CATH topology
1WBQA 3BIQA 4JUQA 3BIPA 4U76A 4S2TP 2BH3A 5CDLA 3IU7A 2V6CA 3CB6A 3FMQA 4U75A 1XGNA 2V3XA 4RZZA 1WKMA 1WY2A 2V3YA 2G6PA 2GU6A 2MATA 2B3HA 1BOAA 2GU7A 5JFRA 4S2RP 1CHMA 1QZYA 1R5GA 1W7VA 5CE6A 4U71A 2EA2A 2GG0A 4ZNGA 4IKUA 3IU8A 3TAVA 1YVMA 4S00A 4MATA 4A6VA 3FMRA 2GG7A 1KP0A 3TB5A 4FUKA 2GA2A 1KQ9A 2NQ6A 1B59A 2GU4A 2HOWA 2GU5A 4U6ZA 2Q95A 4S01A 1C24A 2Q96A 5CLSA 1WL9A 5CDEA 4OOKA 4U70A 2BB7A 5D6EA 2P99A 3D27A 2BWUA 3MX6A 4IDYA 4IPAA 1O0XA 1R58A 2BWXA 1XNZA 2BHBA 4IECA 4U6CA 5CDVA 4RZYA 4R60A 3RVAA 3PKCA 1C23A 5D6FA 4PNCA 4ZWUA 1XGSA 2GG2A 3FM3A 3MR1A 4IKSA 2GGCA 2EVMA 2BHDA 2OAZA 4QR8A 5E5BA 2Q8KA 4U73A 3CB5A 4U6EA 3MATA 4FLLA 2OKNA 4FLIA 4HXXA 3PKBA 4FO8A 4FLJA 4U69A 2Q94A 3S6BA 1WL6A 4A6WA 1M35A 3L24A 1BN5A 1XGMA 1MATA 1WN1A 1YW9A 2GGBA 4FKCA 1YJ3A 2B3KA 5CNXA 4ZWPA 3PKAA 1KQ0A 3PKEA 5FCFA 2BWTA 2BN7A 2NQ7A 4U1BA 2GTXA 3IU9A 2GG8A 3Q6DA 2ZSGA 5JI6A 4IKTA 5CIKA 2B3LA 2ADUA 4EGEA 4FO7A 1QXYA 1JAWA 5JHUA 1PV9A 2GZ5A 2P98A 1C27A 4Z7MA 2DFIA 1YW8A 3RORA 2P9AA 5FCHA 2EA4A 1C22A 2Q92A 2BHAA 4PV4A 4FLKA 2GG3A 3BITA 3CTZA 4KM3A 4U6JA 1QXZA 1W2MA 2BWWA 2IW2A 1R5HA 2GG5A 1Y1NA 2BHCA 2GG9A 2EVOA 4RGZ1 3IG4A 4U6WA 3L7GA 2Q93A 4IU6A 1N51A 1XGOA 4IF7A 2EVCA 1C21A 1QXWA 2V3ZA 1B6AA 1WLRA 1A16A 1YW7A 2BWYA 2BWVA 4IKRA 3PKDA 4ZWOA 4B28A 2BWSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WBQ A;  3BIQ A;  4JUQ A;  3BIP A;  4U76 A;  4S2T P;  2BH3 A;  5CDL A;  3IU7 A;  2V6C A;  3CB6 A;  3FMQ A;  4U75 A;  1XGN A;  2V3X A;  4RZZ A;  1WKM A;  1WY2 A;  2V3Y A;  2G6P A;  2GU6 A;  2MAT A;  2B3H A;  1BOA A;  2GU7 A;  5JFR A;  4S2R P;  1CHM A;  1QZY A;  1R5G A;  1W7V A;  5CE6 A;  4U71 A;  2EA2 A;  2GG0 A;  4ZNG A;  4IKU A;  3IU8 A;  3TAV A;  1YVM A;  4S00 A;  4MAT A;  4A6V A;  3FMR A;  2GG7 A;  1KP0 A;  3TB5 A;  4FUK A;  2GA2 A;  1KQ9 A;  2NQ6 A;  1B59 A;  2GU4 A;  2HOW A;  2GU5 A;  4U6Z A;  2Q95 A;  4S01 A;  1C24 A;  2Q96 A;  5CLS A;  1WL9 A;  5CDE A;  4OOK A;  4U70 A;  2BB7 A;  5D6E A;  2P99 A;  3D27 A;  2BWU A;  3MX6 A;  4IDY A;  4IPA A;  1O0X A;  1R58 A;  2BWX A;  1XNZ A;  2BHB A;  4IEC A;  4U6C A;  5CDV A;  4RZY A;  4R60 A;  3RVA A;  3PKC A;  1C23 A;  5D6F A;  4PNC A;  4ZWU A;  1XGS A;  2GG2 A;  3FM3 A;  3MR1 A;  4IKS A;  2GGC A;  2EVM A;  2BHD A;  2OAZ A;  4QR8 A;  5E5B A;  2Q8K A;  4U73 A;  3CB5 A;  4U6E A;  3MAT A;  4FLL A;  2OKN A;  4FLI A;  4HXX A;  3PKB A;  4FO8 A;  4FLJ A;  4U69 A;  2Q94 A;  3S6B A;  1WL6 A;  4A6W A;  1M35 A;  3L24 A;  1BN5 A;  1XGM A;  1MAT A;  1WN1 A;  1YW9 A;  2GGB A;  4FKC A;  1YJ3 A;  2B3K A;  5CNX A;  4ZWP A;  3PKA A;  1KQ0 A;  3PKE A;  5FCF A;  2BWT A;  2BN7 A;  2NQ7 A;  4U1B A;  2GTX A;  3IU9 A;  2GG8 A;  3Q6D A;  2ZSG A;  5JI6 A;  4IKT A;  5CIK A;  2B3L A;  2ADU A;  4EGE A;  4FO7 A;  1QXY A;  1JAW A;  5JHU A;  1PV9 A;  2GZ5 A;  2P98 A;  1C27 A;  4Z7M A;  2DFI A;  1YW8 A;  3ROR A;  2P9A A;  5FCH A;  2EA4 A;  1C22 A;  2Q92 A;  2BHA A;  4PV4 A;  4FLK A;  2GG3 A;  3BIT A;  3CTZ A;  4KM3 A;  4U6J A;  1QXZ A;  1W2M A;  2BWW A;  2IW2 A;  1R5H A;  2GG5 A;  1Y1N A;  2BHC A;  2GG9 A;  2EVO A;  4RGZ 1;  3IG4 A;  4U6W A;  3L7G A;  2Q93 A;  4IU6 A;  1N51 A;  1XGO A;  4IF7 A;  2EVC A;  1C21 A;  1QXW A;  2V3Z A;  1B6A A;  1WLR A;  1A16 A;  1YW7 A;  2BWY A;  2BWV A;  4IKR A;  3PKD A;  4ZWO A;  4B28 A;  2BWS A; 
#chains in the Genus database with same CATH topology
 1WBQ A;  3BIQ A;  4JUQ A;  3BIP A;  4U76 A;  4S2T P;  2BH3 A;  5CDL A;  3IU7 A;  2V6C A;  3CB6 A;  3FMQ A;  4U75 A;  1XGN A;  2V3X A;  4RZZ A;  1WKM A;  1WY2 A;  2V3Y A;  2G6P A;  2GU6 A;  2MAT A;  2B3H A;  1BOA A;  2GU7 A;  5JFR A;  4S2R P;  1CHM A;  1QZY A;  1R5G A;  1W7V A;  5CE6 A;  4U71 A;  2EA2 A;  2GG0 A;  4ZNG A;  4IKU A;  3IU8 A;  3TAV A;  1YVM A;  4S00 A;  4MAT A;  4A6V A;  3FMR A;  2GG7 A;  1KP0 A;  3TB5 A;  4FUK A;  2GA2 A;  1KQ9 A;  2NQ6 A;  1B59 A;  2GU4 A;  2HOW A;  2GU5 A;  4U6Z A;  2Q95 A;  4S01 A;  1C24 A;  2Q96 A;  5CLS A;  1WL9 A;  5CDE A;  4OOK A;  4U70 A;  2BB7 A;  5D6E A;  2P99 A;  3D27 A;  2BWU A;  3MX6 A;  4IDY A;  4IPA A;  1O0X A;  1R58 A;  2BWX A;  1XNZ A;  2BHB A;  4IEC A;  4U6C A;  5CDV A;  4RZY A;  4R60 A;  3RVA A;  3PKC A;  1C23 A;  5D6F A;  4PNC A;  4ZWU A;  1XGS A;  2GG2 A;  3FM3 A;  3MR1 A;  4IKS A;  2GGC A;  2EVM A;  2BHD A;  2OAZ A;  4QR8 A;  5E5B A;  2Q8K A;  4U73 A;  3CB5 A;  4U6E A;  3MAT A;  4FLL A;  2OKN A;  4FLI A;  4HXX A;  3PKB A;  4FO8 A;  4FLJ A;  4U69 A;  2Q94 A;  3S6B A;  1WL6 A;  4A6W A;  1M35 A;  3L24 A;  1BN5 A;  1XGM A;  1MAT A;  1WN1 A;  1YW9 A;  2GGB A;  4FKC A;  1YJ3 A;  2B3K A;  5CNX A;  4ZWP A;  3PKA A;  1KQ0 A;  3PKE A;  5FCF A;  2BWT A;  2BN7 A;  2NQ7 A;  4U1B A;  2GTX A;  3IU9 A;  2GG8 A;  3Q6D A;  2ZSG A;  5JI6 A;  4IKT A;  5CIK A;  2B3L A;  2ADU A;  4EGE A;  4FO7 A;  1QXY A;  1JAW A;  5JHU A;  1PV9 A;  2GZ5 A;  2P98 A;  1C27 A;  4Z7M A;  2DFI A;  1YW8 A;  3ROR A;  2P9A A;  5FCH A;  2EA4 A;  1C22 A;  2Q92 A;  2BHA A;  4PV4 A;  4FLK A;  2GG3 A;  3BIT A;  3CTZ A;  4KM3 A;  4U6J A;  1QXZ A;  1W2M A;  2BWW A;  2IW2 A;  1R5H A;  2GG5 A;  1Y1N A;  2BHC A;  2GG9 A;  2EVO A;  4RGZ 1;  3IG4 A;  4U6W A;  3L7G A;  2Q93 A;  4IU6 A;  1N51 A;  1XGO A;  4IF7 A;  2EVC A;  1C21 A;  1QXW A;  2V3Z A;  1B6A A;  1WLR A;  1A16 A;  1YW7 A;  2BWY A;  2BWV A;  4IKR A;  3PKD A;  4ZWO A;  4B28 A;  2BWS A; 
#chains in the Genus database with same CATH homology
 1WBQ A;  3BIQ A;  4JUQ A;  3BIP A;  4U76 A;  4S2T P;  2BH3 A;  5CDL A;  3IU7 A;  2V6C A;  3CB6 A;  3FMQ A;  4U75 A;  1XGN A;  2V3X A;  4RZZ A;  1WKM A;  1WY2 A;  2V3Y A;  2G6P A;  2GU6 A;  2MAT A;  2B3H A;  1BOA A;  2GU7 A;  5JFR A;  4S2R P;  1CHM A;  1QZY A;  1R5G A;  1W7V A;  5CE6 A;  4U71 A;  2EA2 A;  2GG0 A;  4ZNG A;  4IKU A;  3IU8 A;  3TAV A;  1YVM A;  4S00 A;  4MAT A;  4A6V A;  3FMR A;  2GG7 A;  1KP0 A;  3TB5 A;  4FUK A;  2GA2 A;  1KQ9 A;  2NQ6 A;  1B59 A;  2GU4 A;  2HOW A;  2GU5 A;  4U6Z A;  2Q95 A;  4S01 A;  1C24 A;  2Q96 A;  5CLS A;  1WL9 A;  5CDE A;  4OOK A;  4U70 A;  2BB7 A;  5D6E A;  2P99 A;  3D27 A;  2BWU A;  3MX6 A;  4IDY A;  4IPA A;  1O0X A;  1R58 A;  2BWX A;  1XNZ A;  2BHB A;  4IEC A;  4U6C A;  5CDV A;  4RZY A;  4R60 A;  3RVA A;  3PKC A;  1C23 A;  5D6F A;  4PNC A;  4ZWU A;  1XGS A;  2GG2 A;  3FM3 A;  3MR1 A;  4IKS A;  2GGC A;  2EVM A;  2BHD A;  2OAZ A;  4QR8 A;  5E5B A;  2Q8K A;  4U73 A;  3CB5 A;  4U6E A;  3MAT A;  4FLL A;  2OKN A;  4FLI A;  4HXX A;  3PKB A;  4FO8 A;  4FLJ A;  4U69 A;  2Q94 A;  3S6B A;  1WL6 A;  4A6W A;  1M35 A;  3L24 A;  1BN5 A;  1XGM A;  1MAT A;  1WN1 A;  1YW9 A;  2GGB A;  4FKC A;  1YJ3 A;  2B3K A;  5CNX A;  4ZWP A;  3PKA A;  1KQ0 A;  3PKE A;  5FCF A;  2BWT A;  2BN7 A;  2NQ7 A;  4U1B A;  2GTX A;  3IU9 A;  2GG8 A;  3Q6D A;  2ZSG A;  5JI6 A;  4IKT A;  5CIK A;  2B3L A;  2ADU A;  4EGE A;  4FO7 A;  1QXY A;  1JAW A;  5JHU A;  1PV9 A;  2GZ5 A;  2P98 A;  1C27 A;  4Z7M A;  2DFI A;  1YW8 A;  3ROR A;  2P9A A;  5FCH A;  2EA4 A;  1C22 A;  2Q92 A;  2BHA A;  4PV4 A;  4FLK A;  2GG3 A;  3BIT A;  3CTZ A;  4KM3 A;  4U6J A;  1QXZ A;  1W2M A;  2BWW A;  2IW2 A;  1R5H A;  2GG5 A;  1Y1N A;  2BHC A;  2GG9 A;  2EVO A;  4RGZ 1;  3IG4 A;  4U6W A;  3L7G A;  2Q93 A;  4IU6 A;  1N51 A;  1XGO A;  4IF7 A;  2EVC A;  1C21 A;  1QXW A;  2V3Z A;  1B6A A;  1WLR A;  1A16 A;  1YW7 A;  2BWY A;  2BWV A;  4IKR A;  3PKD A;  4ZWO A;  4B28 A;  2BWS A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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