4A6VA

X-ray structures of oxazole hydroxamate ecmetap-mn complexes
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
264
structure length
264
Chain Sequence
AISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDEA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
publication title Hydroxamic Acids as Potent Inhibitors of Fe(II) and Mn(II) E. Coli Methionine Aminopeptidase: Biological Activities and X-Ray Structures of Oxazole Hydroxamate-Ecmetap-Mn Complexes.
pubmed doi rcsb
molecule keywords METHIONINE AMINOPEPTIDASE
total genus 86
structure length 264
sequence length 264
chains with identical sequence B
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2011-11-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4a6vA00
1KQ0A 4R60A 2BWXA 4A6VA 4IF7A 2GA2A 1B59A 2Q93A 4PV4A 1BOAA 1XGSA 5CE6A 1WN1A 2BWVA 4U69A 3MR1A 1WKMA 5JHUA 1QXYA 1YW8A 1KP0A 2IW2A 1C22A 2ZSGA 4S2TP 3IU8A 2BHBA 1YW9A 5D6EA 1R5HA 3MX6A 4S01A 2V3XA 4FLJA 1XGOA 1WBQA 2BWSA 2GG7A 3IU7A 4S00A 2P9AA 4ZNGA 5FCHA 4U76A 2V3YA 3FMQA 1XNZA 1Y1NA 1WL9A 4U6CA 4FO7A 4KM3A 4MATA 4FLIA 1BN5A 1C24A 2GTXA 2BB7A 2GG9A 4OOKA 3Q6DA 3PKBA 2EA4A 4RZZA 4U6EA 4PNCA 2B3LA 1W7VA 1YJ3A 4A6WA 3PKAA 1XGMA 4JUQA 2GG2A 5E5BA 2Q8KA 2BWTA 3CB5A 2ADUA 4IKTA 4IKRA 5CDEA 2BHCA 2V3ZA 3CB6A 2BWYA 4S2RP 4IKUA 1R58A 3BIPA 4ZWPA 2EVCA 2HOWA 3IG4A 1XGNA 2OKNA 3L7GA 3MATA 2GG3A 4U1BA 5D6FA 4ZWOA 2EVOA 5JFRA 1WY2A 1W2MA 4FUKA 2GGBA 3PKEA 5CLSA 3BIQA 3PKCA 1YW7A 2GG0A 2GU6A 2NQ7A 4QR8A 1C21A 2BHDA 3FM3A 2MATA 2BHAA 4IKSA 4U6ZA 2Q92A 2DFIA 3BITA 3CTZA 3L24A 1R5GA 2GGCA 2BN7A 4IDYA 4IPAA 2GG8A 2GG5A 1QXWA 5CDVA 2BWUA 2EVMA 4EGEA 3FMRA 4U6WA 1A16A 2EA2A 4ZWUA 5CNXA 1C23A 4U75A 5FCFA 4B28A 4Z7MA 3PKDA 1QZYA 2GZ5A 1MATA 2G6PA 1B6AA 2BH3A 4RZYA 5JI6A 2BWWA 4FKCA 1WL6A 1QXZA 3IU9A 2Q96A 3D27A 4U70A 1WLRA 2P99A 4IECA 4U71A 1JAWA 5CDLA 2GU7A 2V6CA 4IU6A 1KQ9A 4FLKA 2OAZA 2P98A 3RORA 1C27A 4HXXA 4RGZ1 1YVMA 2B3HA 2GU4A 1PV9A 1CHMA 2GU5A 2Q94A 3RVAA 1N51A 4U6JA 5CIKA 2NQ6A 4FLLA 2B3KA 3S6BA 3TAVA 1M35A 1O0XA 2Q95A 4FO8A 4U73A 3TB5A
chains in the Genus database with same CATH superfamily
1KQ0A 4R60A 2BWXA 4A6VA 4IF7A 2GA2A 1B59A 2Q93A 4PV4A 1BOAA 1XGSA 5CE6A 1WN1A 2BWVA 4U69A 3MR1A 1WKMA 5JHUA 1QXYA 1YW8A 1KP0A 2IW2A 1C22A 2ZSGA 4S2TP 3IU8A 2BHBA 1YW9A 5D6EA 1R5HA 3MX6A 4S01A 2V3XA 4FLJA 1XGOA 1WBQA 2BWSA 2GG7A 3IU7A 4S00A 2P9AA 4ZNGA 5FCHA 4U76A 2V3YA 3FMQA 1XNZA 1Y1NA 1WL9A 4U6CA 4FO7A 4KM3A 4MATA 4FLIA 1BN5A 1C24A 2GTXA 2BB7A 2GG9A 4OOKA 3Q6DA 3PKBA 2EA4A 4RZZA 4U6EA 4PNCA 2B3LA 1W7VA 1YJ3A 4A6WA 3PKAA 1XGMA 4JUQA 2GG2A 5E5BA 2Q8KA 2BWTA 3CB5A 2ADUA 4IKTA 4IKRA 5CDEA 2BHCA 2V3ZA 3CB6A 2BWYA 4S2RP 4IKUA 1R58A 3BIPA 4ZWPA 2EVCA 2HOWA 3IG4A 1XGNA 2OKNA 3L7GA 3MATA 2GG3A 4U1BA 5D6FA 4ZWOA 2EVOA 5JFRA 1WY2A 1W2MA 4FUKA 2GGBA 3PKEA 5CLSA 3BIQA 3PKCA 1YW7A 2GG0A 2GU6A 2NQ7A 4QR8A 1C21A 2BHDA 3FM3A 2MATA 2BHAA 4IKSA 4U6ZA 2Q92A 2DFIA 3BITA 3CTZA 3L24A 1R5GA 2GGCA 2BN7A 4IDYA 4IPAA 2GG8A 2GG5A 1QXWA 5CDVA 2BWUA 2EVMA 4EGEA 3FMRA 4U6WA 1A16A 2EA2A 4ZWUA 5CNXA 1C23A 4U75A 5FCFA 4B28A 4Z7MA 3PKDA 1QZYA 2GZ5A 1MATA 2G6PA 1B6AA 2BH3A 4RZYA 5JI6A 2BWWA 4FKCA 1WL6A 1QXZA 3IU9A 2Q96A 3D27A 4U70A 1WLRA 2P99A 4IECA 4U71A 1JAWA 5CDLA 2GU7A 2V6CA 4IU6A 1KQ9A 4FLKA 2OAZA 2P98A 3RORA 1C27A 4HXXA 4RGZ1 1YVMA 2B3HA 2GU4A 1PV9A 1CHMA 2GU5A 2Q94A 3RVAA 1N51A 4U6JA 5CIKA 2NQ6A 4FLLA 2B3KA 3S6BA 3TAVA 1M35A 1O0XA 2Q95A 4FO8A 4U73A 3TB5A
chains in the Genus database with same CATH topology
1KQ0A 4R60A 2BWXA 4A6VA 4IF7A 2GA2A 1B59A 2Q93A 4PV4A 1BOAA 1XGSA 5CE6A 1WN1A 2BWVA 4U69A 3MR1A 1WKMA 5JHUA 1QXYA 1YW8A 1KP0A 2IW2A 1C22A 2ZSGA 4S2TP 3IU8A 2BHBA 1YW9A 5D6EA 1R5HA 3MX6A 4S01A 2V3XA 4FLJA 1XGOA 1WBQA 2BWSA 2GG7A 3IU7A 4S00A 2P9AA 4ZNGA 5FCHA 4U76A 2V3YA 3FMQA 1XNZA 1Y1NA 1WL9A 4U6CA 4FO7A 4KM3A 4MATA 4FLIA 1BN5A 1C24A 2GTXA 2BB7A 2GG9A 4OOKA 3Q6DA 3PKBA 2EA4A 4RZZA 4U6EA 4PNCA 2B3LA 1W7VA 1YJ3A 4A6WA 3PKAA 1XGMA 4JUQA 2GG2A 5E5BA 2Q8KA 2BWTA 3CB5A 2ADUA 4IKTA 4IKRA 5CDEA 2BHCA 2V3ZA 3CB6A 2BWYA 4S2RP 4IKUA 1R58A 3BIPA 4ZWPA 2EVCA 2HOWA 3IG4A 1XGNA 2OKNA 3L7GA 3MATA 2GG3A 4U1BA 5D6FA 4ZWOA 2EVOA 5JFRA 1WY2A 1W2MA 4FUKA 2GGBA 3PKEA 5CLSA 3BIQA 3PKCA 1YW7A 2GG0A 2GU6A 2NQ7A 4QR8A 1C21A 2BHDA 3FM3A 2MATA 2BHAA 4IKSA 4U6ZA 2Q92A 2DFIA 3BITA 3CTZA 3L24A 1R5GA 2GGCA 2BN7A 4IDYA 4IPAA 2GG8A 2GG5A 1QXWA 5CDVA 2BWUA 2EVMA 4EGEA 3FMRA 4U6WA 1A16A 2EA2A 4ZWUA 5CNXA 1C23A 4U75A 5FCFA 4B28A 4Z7MA 3PKDA 1QZYA 2GZ5A 1MATA 2G6PA 1B6AA 2BH3A 4RZYA 5JI6A 2BWWA 4FKCA 1WL6A 1QXZA 3IU9A 2Q96A 3D27A 4U70A 1WLRA 2P99A 4IECA 4U71A 1JAWA 5CDLA 2GU7A 2V6CA 4IU6A 1KQ9A 4FLKA 2OAZA 2P98A 3RORA 1C27A 4HXXA 4RGZ1 1YVMA 2B3HA 2GU4A 1PV9A 1CHMA 2GU5A 2Q94A 3RVAA 1N51A 4U6JA 5CIKA 2NQ6A 4FLLA 2B3KA 3S6BA 3TAVA 1M35A 1O0XA 2Q95A 4FO8A 4U73A 3TB5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1KQ0 A;  4R60 A;  2BWX A;  4A6V A;  4IF7 A;  2GA2 A;  1B59 A;  2Q93 A;  4PV4 A;  1BOA A;  1XGS A;  5CE6 A;  1WN1 A;  2BWV A;  4U69 A;  3MR1 A;  1WKM A;  5JHU A;  1QXY A;  1YW8 A;  1KP0 A;  2IW2 A;  1C22 A;  2ZSG A;  4S2T P;  3IU8 A;  2BHB A;  1YW9 A;  5D6E A;  1R5H A;  3MX6 A;  4S01 A;  2V3X A;  4FLJ A;  1XGO A;  1WBQ A;  2BWS A;  2GG7 A;  3IU7 A;  4S00 A;  2P9A A;  4ZNG A;  5FCH A;  4U76 A;  2V3Y A;  3FMQ A;  1XNZ A;  1Y1N A;  1WL9 A;  4U6C A;  4FO7 A;  4KM3 A;  4MAT A;  4FLI A;  1BN5 A;  1C24 A;  2GTX A;  2BB7 A;  2GG9 A;  4OOK A;  3Q6D A;  3PKB A;  2EA4 A;  4RZZ A;  4U6E A;  4PNC A;  2B3L A;  1W7V A;  1YJ3 A;  4A6W A;  3PKA A;  1XGM A;  4JUQ A;  2GG2 A;  5E5B A;  2Q8K A;  2BWT A;  3CB5 A;  2ADU A;  4IKT A;  4IKR A;  5CDE A;  2BHC A;  2V3Z A;  3CB6 A;  2BWY A;  4S2R P;  4IKU A;  1R58 A;  3BIP A;  4ZWP A;  2EVC A;  2HOW A;  3IG4 A;  1XGN A;  2OKN A;  3L7G A;  3MAT A;  2GG3 A;  4U1B A;  5D6F A;  4ZWO A;  2EVO A;  5JFR A;  1WY2 A;  1W2M A;  4FUK A;  2GGB A;  3PKE A;  5CLS A;  3BIQ A;  3PKC A;  1YW7 A;  2GG0 A;  2GU6 A;  2NQ7 A;  4QR8 A;  1C21 A;  2BHD A;  3FM3 A;  2MAT A;  2BHA A;  4IKS A;  4U6Z A;  2Q92 A;  2DFI A;  3BIT A;  3CTZ A;  3L24 A;  1R5G A;  2GGC A;  2BN7 A;  4IDY A;  4IPA A;  2GG8 A;  2GG5 A;  1QXW A;  5CDV A;  2BWU A;  2EVM A;  4EGE A;  3FMR A;  4U6W A;  1A16 A;  2EA2 A;  4ZWU A;  5CNX A;  1C23 A;  4U75 A;  5FCF A;  4B28 A;  4Z7M A;  3PKD A;  1QZY A;  2GZ5 A;  1MAT A;  2G6P A;  1B6A A;  2BH3 A;  4RZY A;  5JI6 A;  2BWW A;  4FKC A;  1WL6 A;  1QXZ A;  3IU9 A;  2Q96 A;  3D27 A;  4U70 A;  1WLR A;  2P99 A;  4IEC A;  4U71 A;  1JAW A;  5CDL A;  2GU7 A;  2V6C A;  4IU6 A;  1KQ9 A;  4FLK A;  2OAZ A;  2P98 A;  3ROR A;  1C27 A;  4HXX A;  4RGZ 1;  1YVM A;  2B3H A;  2GU4 A;  1PV9 A;  1CHM A;  2GU5 A;  2Q94 A;  3RVA A;  1N51 A;  4U6J A;  5CIK A;  2NQ6 A;  4FLL A;  2B3K A;  3S6B A;  3TAV A;  1M35 A;  1O0X A;  2Q95 A;  4FO8 A;  4U73 A;  3TB5 A; 
#chains in the Genus database with same CATH topology
 1KQ0 A;  4R60 A;  2BWX A;  4A6V A;  4IF7 A;  2GA2 A;  1B59 A;  2Q93 A;  4PV4 A;  1BOA A;  1XGS A;  5CE6 A;  1WN1 A;  2BWV A;  4U69 A;  3MR1 A;  1WKM A;  5JHU A;  1QXY A;  1YW8 A;  1KP0 A;  2IW2 A;  1C22 A;  2ZSG A;  4S2T P;  3IU8 A;  2BHB A;  1YW9 A;  5D6E A;  1R5H A;  3MX6 A;  4S01 A;  2V3X A;  4FLJ A;  1XGO A;  1WBQ A;  2BWS A;  2GG7 A;  3IU7 A;  4S00 A;  2P9A A;  4ZNG A;  5FCH A;  4U76 A;  2V3Y A;  3FMQ A;  1XNZ A;  1Y1N A;  1WL9 A;  4U6C A;  4FO7 A;  4KM3 A;  4MAT A;  4FLI A;  1BN5 A;  1C24 A;  2GTX A;  2BB7 A;  2GG9 A;  4OOK A;  3Q6D A;  3PKB A;  2EA4 A;  4RZZ A;  4U6E A;  4PNC A;  2B3L A;  1W7V A;  1YJ3 A;  4A6W A;  3PKA A;  1XGM A;  4JUQ A;  2GG2 A;  5E5B A;  2Q8K A;  2BWT A;  3CB5 A;  2ADU A;  4IKT A;  4IKR A;  5CDE A;  2BHC A;  2V3Z A;  3CB6 A;  2BWY A;  4S2R P;  4IKU A;  1R58 A;  3BIP A;  4ZWP A;  2EVC A;  2HOW A;  3IG4 A;  1XGN A;  2OKN A;  3L7G A;  3MAT A;  2GG3 A;  4U1B A;  5D6F A;  4ZWO A;  2EVO A;  5JFR A;  1WY2 A;  1W2M A;  4FUK A;  2GGB A;  3PKE A;  5CLS A;  3BIQ A;  3PKC A;  1YW7 A;  2GG0 A;  2GU6 A;  2NQ7 A;  4QR8 A;  1C21 A;  2BHD A;  3FM3 A;  2MAT A;  2BHA A;  4IKS A;  4U6Z A;  2Q92 A;  2DFI A;  3BIT A;  3CTZ A;  3L24 A;  1R5G A;  2GGC A;  2BN7 A;  4IDY A;  4IPA A;  2GG8 A;  2GG5 A;  1QXW A;  5CDV A;  2BWU A;  2EVM A;  4EGE A;  3FMR A;  4U6W A;  1A16 A;  2EA2 A;  4ZWU A;  5CNX A;  1C23 A;  4U75 A;  5FCF A;  4B28 A;  4Z7M A;  3PKD A;  1QZY A;  2GZ5 A;  1MAT A;  2G6P A;  1B6A A;  2BH3 A;  4RZY A;  5JI6 A;  2BWW A;  4FKC A;  1WL6 A;  1QXZ A;  3IU9 A;  2Q96 A;  3D27 A;  4U70 A;  1WLR A;  2P99 A;  4IEC A;  4U71 A;  1JAW A;  5CDL A;  2GU7 A;  2V6C A;  4IU6 A;  1KQ9 A;  4FLK A;  2OAZ A;  2P98 A;  3ROR A;  1C27 A;  4HXX A;  4RGZ 1;  1YVM A;  2B3H A;  2GU4 A;  1PV9 A;  1CHM A;  2GU5 A;  2Q94 A;  3RVA A;  1N51 A;  4U6J A;  5CIK A;  2NQ6 A;  4FLL A;  2B3K A;  3S6B A;  3TAV A;  1M35 A;  1O0X A;  2Q95 A;  4FO8 A;  4U73 A;  3TB5 A; 
#chains in the Genus database with same CATH homology
 1KQ0 A;  4R60 A;  2BWX A;  4A6V A;  4IF7 A;  2GA2 A;  1B59 A;  2Q93 A;  4PV4 A;  1BOA A;  1XGS A;  5CE6 A;  1WN1 A;  2BWV A;  4U69 A;  3MR1 A;  1WKM A;  5JHU A;  1QXY A;  1YW8 A;  1KP0 A;  2IW2 A;  1C22 A;  2ZSG A;  4S2T P;  3IU8 A;  2BHB A;  1YW9 A;  5D6E A;  1R5H A;  3MX6 A;  4S01 A;  2V3X A;  4FLJ A;  1XGO A;  1WBQ A;  2BWS A;  2GG7 A;  3IU7 A;  4S00 A;  2P9A A;  4ZNG A;  5FCH A;  4U76 A;  2V3Y A;  3FMQ A;  1XNZ A;  1Y1N A;  1WL9 A;  4U6C A;  4FO7 A;  4KM3 A;  4MAT A;  4FLI A;  1BN5 A;  1C24 A;  2GTX A;  2BB7 A;  2GG9 A;  4OOK A;  3Q6D A;  3PKB A;  2EA4 A;  4RZZ A;  4U6E A;  4PNC A;  2B3L A;  1W7V A;  1YJ3 A;  4A6W A;  3PKA A;  1XGM A;  4JUQ A;  2GG2 A;  5E5B A;  2Q8K A;  2BWT A;  3CB5 A;  2ADU A;  4IKT A;  4IKR A;  5CDE A;  2BHC A;  2V3Z A;  3CB6 A;  2BWY A;  4S2R P;  4IKU A;  1R58 A;  3BIP A;  4ZWP A;  2EVC A;  2HOW A;  3IG4 A;  1XGN A;  2OKN A;  3L7G A;  3MAT A;  2GG3 A;  4U1B A;  5D6F A;  4ZWO A;  2EVO A;  5JFR A;  1WY2 A;  1W2M A;  4FUK A;  2GGB A;  3PKE A;  5CLS A;  3BIQ A;  3PKC A;  1YW7 A;  2GG0 A;  2GU6 A;  2NQ7 A;  4QR8 A;  1C21 A;  2BHD A;  3FM3 A;  2MAT A;  2BHA A;  4IKS A;  4U6Z A;  2Q92 A;  2DFI A;  3BIT A;  3CTZ A;  3L24 A;  1R5G A;  2GGC A;  2BN7 A;  4IDY A;  4IPA A;  2GG8 A;  2GG5 A;  1QXW A;  5CDV A;  2BWU A;  2EVM A;  4EGE A;  3FMR A;  4U6W A;  1A16 A;  2EA2 A;  4ZWU A;  5CNX A;  1C23 A;  4U75 A;  5FCF A;  4B28 A;  4Z7M A;  3PKD A;  1QZY A;  2GZ5 A;  1MAT A;  2G6P A;  1B6A A;  2BH3 A;  4RZY A;  5JI6 A;  2BWW A;  4FKC A;  1WL6 A;  1QXZ A;  3IU9 A;  2Q96 A;  3D27 A;  4U70 A;  1WLR A;  2P99 A;  4IEC A;  4U71 A;  1JAW A;  5CDL A;  2GU7 A;  2V6C A;  4IU6 A;  1KQ9 A;  4FLK A;  2OAZ A;  2P98 A;  3ROR A;  1C27 A;  4HXX A;  4RGZ 1;  1YVM A;  2B3H A;  2GU4 A;  1PV9 A;  1CHM A;  2GU5 A;  2Q94 A;  3RVA A;  1N51 A;  4U6J A;  5CIK A;  2NQ6 A;  4FLL A;  2B3K A;  3S6B A;  3TAV A;  1M35 A;  1O0X A;  2Q95 A;  4FO8 A;  4U73 A;  3TB5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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