4OOKA

Third metal bound m.tuberculosis methionine aminopeptidase
Total Genus 88
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
282
structure length
282
Chain Sequence
b'RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTAL'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents
pubmed doi rcsb
molecule keywords Methionine aminopeptidase 2
source organism Mycobacterium tuberculosis
molecule tags Hydrolase
total genus 88
structure length 282
sequence length 282
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2014-02-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4ookA01
4IKSA 1QXYA 4IPAA 1XGSA 3TAVA 1MATA 4PNCA 1R5GA 2EVOA 3IU9A 3PKBA 4A6WA 2B3KA 2GG8A 1XGOA 4U1BA 3IG4A 1WL9A 2GG3A 2V6CA 2OAZA 3CB5A 4FLIA 4FUKA 1C24A 5JHUA 3PKCA 5FCFA 2BHBA 2G6PA 1WLRA 2V3ZA 2V3XA 1B59A 1PV9A 2BHDA 3FMQA 3L24A 3L7GA 5JI6A 2Q93A 5FCHA 1B6AA 4U76A 2P98A 2GA2A 4OOKA 1WY2A 4QR8A 1C21A 1YVMA 2NQ7A 5CIKA 1XGMA 3RVAA 5E5BA 2GTXA 2BWYA 4FO7A 4IU6A 1YJ3A 2BWSA 1C27A 2EVCA 2V3YA 2OKNA 4U71A 5D6EA 2BHCA 4KM3A 1YW7A 2EA4A 1C23A 1R5HA 3CB6A 1KP0A 2GG7A 3MX6A 3PKDA 4S2RP 5CNXA 2BWUA 2IW2A 4FLLA 2EVMA 4B28A 4Z7MA 4U6ZA 4U6WA 1C22A 4RZZA 2NQ6A 1W2MA 2ADUA 5JFRA 2BWVA 2GU4A 2Q92A 3CTZA 2B3LA 1YW8A 2BB7A 2GG9A 2GU6A 4RZYA 4S00A 1O0XA 5D6FA 4EGEA 3BITA 1QXWA 1W7VA 1WN1A 4U73A 4FLKA 1Y1NA 4U6EA 1BN5A 1BOAA 1WKMA 3PKEA 3IU7A 4JUQA 1QXZA 2GU7A 2B3HA 1KQ9A 1R58A 4A6VA 4RGZ1 4U6JA 1YW9A 2GG2A 3BIPA 3Q6DA 4FO8A 4IECA 1CHMA 2MATA 2BWWA 4FKCA 2P9AA 3S6BA 2P99A 4IKTA 4IKRA 2GZ5A 4ZWUA 3FMRA 1N51A 4PV4A 4FLJA 1KQ0A 1XNZA 3IU8A 5CE6A 4ZWOA 5CDLA 1M35A 4IDYA 1WBQA 2ZSGA 2Q8KA 5CLSA 5CDEA 4MATA 4S2TP 3MR1A 3D27A 3RORA 2Q95A 1A16A 1QZYA 4U70A 2BWXA 3BIQA 2BWTA 1JAWA 2GG5A 2GGCA 2HOWA 4S01A 4U69A 2Q96A 2Q94A 4ZNGA 2EA2A 1WL6A 2BHAA 2BN7A 4IKUA 1XGNA 2GG0A 2GGBA 3PKAA 2DFIA 4U75A 3FM3A 4HXXA 3TB5A 4ZWPA 5CDVA 4IF7A 2BH3A 3MATA 4U6CA 4R60A 2GU5A
chains in the Genus database with same CATH superfamily
4IKSA 1QXYA 4IPAA 1XGSA 3TAVA 1MATA 4PNCA 1R5GA 2EVOA 3IU9A 3PKBA 4A6WA 2B3KA 2GG8A 1XGOA 4U1BA 3IG4A 1WL9A 2GG3A 2V6CA 2OAZA 3CB5A 4FLIA 4FUKA 1C24A 5JHUA 3PKCA 5FCFA 2BHBA 2G6PA 1WLRA 2V3ZA 2V3XA 1B59A 1PV9A 2BHDA 3FMQA 3L24A 3L7GA 5JI6A 2Q93A 5FCHA 1B6AA 4U76A 2P98A 2GA2A 4OOKA 1WY2A 4QR8A 1C21A 1YVMA 2NQ7A 5CIKA 1XGMA 3RVAA 5E5BA 2GTXA 2BWYA 4FO7A 4IU6A 1YJ3A 2BWSA 1C27A 2EVCA 2V3YA 2OKNA 4U71A 5D6EA 2BHCA 4KM3A 1YW7A 2EA4A 1C23A 1R5HA 3CB6A 1KP0A 2GG7A 3MX6A 3PKDA 4S2RP 5CNXA 2BWUA 2IW2A 4FLLA 2EVMA 4B28A 4Z7MA 4U6ZA 4U6WA 1C22A 4RZZA 2NQ6A 1W2MA 2ADUA 5JFRA 2BWVA 2GU4A 2Q92A 3CTZA 2B3LA 1YW8A 2BB7A 2GG9A 2GU6A 4RZYA 4S00A 1O0XA 5D6FA 4EGEA 3BITA 1QXWA 1W7VA 1WN1A 4U73A 4FLKA 1Y1NA 4U6EA 1BN5A 1BOAA 1WKMA 3PKEA 3IU7A 4JUQA 1QXZA 2GU7A 2B3HA 1KQ9A 1R58A 4A6VA 4RGZ1 4U6JA 1YW9A 2GG2A 3BIPA 3Q6DA 4FO8A 4IECA 1CHMA 2MATA 2BWWA 4FKCA 2P9AA 3S6BA 2P99A 4IKTA 4IKRA 2GZ5A 4ZWUA 3FMRA 1N51A 4PV4A 4FLJA 1KQ0A 1XNZA 3IU8A 5CE6A 4ZWOA 5CDLA 1M35A 4IDYA 1WBQA 2ZSGA 2Q8KA 5CLSA 5CDEA 4MATA 4S2TP 3MR1A 3D27A 3RORA 2Q95A 1A16A 1QZYA 4U70A 2BWXA 3BIQA 2BWTA 1JAWA 2GG5A 2GGCA 2HOWA 4S01A 4U69A 2Q96A 2Q94A 4ZNGA 2EA2A 1WL6A 2BHAA 2BN7A 4IKUA 1XGNA 2GG0A 2GGBA 3PKAA 2DFIA 4U75A 3FM3A 4HXXA 3TB5A 4ZWPA 5CDVA 4IF7A 2BH3A 3MATA 4U6CA 4R60A 2GU5A
chains in the Genus database with same CATH topology
4IKSA 1QXYA 4IPAA 1XGSA 3TAVA 1MATA 4PNCA 1R5GA 2EVOA 3IU9A 3PKBA 4A6WA 2B3KA 2GG8A 1XGOA 4U1BA 3IG4A 1WL9A 2GG3A 2V6CA 2OAZA 3CB5A 4FLIA 4FUKA 1C24A 5JHUA 3PKCA 5FCFA 2BHBA 2G6PA 1WLRA 2V3ZA 2V3XA 1B59A 1PV9A 2BHDA 3FMQA 3L24A 3L7GA 5JI6A 2Q93A 5FCHA 1B6AA 4U76A 2P98A 2GA2A 4OOKA 1WY2A 4QR8A 1C21A 1YVMA 2NQ7A 5CIKA 1XGMA 3RVAA 5E5BA 2GTXA 2BWYA 4FO7A 4IU6A 1YJ3A 2BWSA 1C27A 2EVCA 2V3YA 2OKNA 4U71A 5D6EA 2BHCA 4KM3A 1YW7A 2EA4A 1C23A 1R5HA 3CB6A 1KP0A 2GG7A 3MX6A 3PKDA 4S2RP 5CNXA 2BWUA 2IW2A 4FLLA 2EVMA 4B28A 4Z7MA 4U6ZA 4U6WA 1C22A 4RZZA 2NQ6A 1W2MA 2ADUA 5JFRA 2BWVA 2GU4A 2Q92A 3CTZA 2B3LA 1YW8A 2BB7A 2GG9A 2GU6A 4RZYA 4S00A 1O0XA 5D6FA 4EGEA 3BITA 1QXWA 1W7VA 1WN1A 4U73A 4FLKA 1Y1NA 4U6EA 1BN5A 1BOAA 1WKMA 3PKEA 3IU7A 4JUQA 1QXZA 2GU7A 2B3HA 1KQ9A 1R58A 4A6VA 4RGZ1 4U6JA 1YW9A 2GG2A 3BIPA 3Q6DA 4FO8A 4IECA 1CHMA 2MATA 2BWWA 4FKCA 2P9AA 3S6BA 2P99A 4IKTA 4IKRA 2GZ5A 4ZWUA 3FMRA 1N51A 4PV4A 4FLJA 1KQ0A 1XNZA 3IU8A 5CE6A 4ZWOA 5CDLA 1M35A 4IDYA 1WBQA 2ZSGA 2Q8KA 5CLSA 5CDEA 4MATA 4S2TP 3MR1A 3D27A 3RORA 2Q95A 1A16A 1QZYA 4U70A 2BWXA 3BIQA 2BWTA 1JAWA 2GG5A 2GGCA 2HOWA 4S01A 4U69A 2Q96A 2Q94A 4ZNGA 2EA2A 1WL6A 2BHAA 2BN7A 4IKUA 1XGNA 2GG0A 2GGBA 3PKAA 2DFIA 4U75A 3FM3A 4HXXA 3TB5A 4ZWPA 5CDVA 4IF7A 2BH3A 3MATA 4U6CA 4R60A 2GU5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IKS A;  1QXY A;  4IPA A;  1XGS A;  3TAV A;  1MAT A;  4PNC A;  1R5G A;  2EVO A;  3IU9 A;  3PKB A;  4A6W A;  2B3K A;  2GG8 A;  1XGO A;  4U1B A;  3IG4 A;  1WL9 A;  2GG3 A;  2V6C A;  2OAZ A;  3CB5 A;  4FLI A;  4FUK A;  1C24 A;  5JHU A;  3PKC A;  5FCF A;  2BHB A;  2G6P A;  1WLR A;  2V3Z A;  2V3X A;  1B59 A;  1PV9 A;  2BHD A;  3FMQ A;  3L24 A;  3L7G A;  5JI6 A;  2Q93 A;  5FCH A;  1B6A A;  4U76 A;  2P98 A;  2GA2 A;  4OOK A;  1WY2 A;  4QR8 A;  1C21 A;  1YVM A;  2NQ7 A;  5CIK A;  1XGM A;  3RVA A;  5E5B A;  2GTX A;  2BWY A;  4FO7 A;  4IU6 A;  1YJ3 A;  2BWS A;  1C27 A;  2EVC A;  2V3Y A;  2OKN A;  4U71 A;  5D6E A;  2BHC A;  4KM3 A;  1YW7 A;  2EA4 A;  1C23 A;  1R5H A;  3CB6 A;  1KP0 A;  2GG7 A;  3MX6 A;  3PKD A;  4S2R P;  5CNX A;  2BWU A;  2IW2 A;  4FLL A;  2EVM A;  4B28 A;  4Z7M A;  4U6Z A;  4U6W A;  1C22 A;  4RZZ A;  2NQ6 A;  1W2M A;  2ADU A;  5JFR A;  2BWV A;  2GU4 A;  2Q92 A;  3CTZ A;  2B3L A;  1YW8 A;  2BB7 A;  2GG9 A;  2GU6 A;  4RZY A;  4S00 A;  1O0X A;  5D6F A;  4EGE A;  3BIT A;  1QXW A;  1W7V A;  1WN1 A;  4U73 A;  4FLK A;  1Y1N A;  4U6E A;  1BN5 A;  1BOA A;  1WKM A;  3PKE A;  3IU7 A;  4JUQ A;  1QXZ A;  2GU7 A;  2B3H A;  1KQ9 A;  1R58 A;  4A6V A;  4RGZ 1;  4U6J A;  1YW9 A;  2GG2 A;  3BIP A;  3Q6D A;  4FO8 A;  4IEC A;  1CHM A;  2MAT A;  2BWW A;  4FKC A;  2P9A A;  3S6B A;  2P99 A;  4IKT A;  4IKR A;  2GZ5 A;  4ZWU A;  3FMR A;  1N51 A;  4PV4 A;  4FLJ A;  1KQ0 A;  1XNZ A;  3IU8 A;  5CE6 A;  4ZWO A;  5CDL A;  1M35 A;  4IDY A;  1WBQ A;  2ZSG A;  2Q8K A;  5CLS A;  5CDE A;  4MAT A;  4S2T P;  3MR1 A;  3D27 A;  3ROR A;  2Q95 A;  1A16 A;  1QZY A;  4U70 A;  2BWX A;  3BIQ A;  2BWT A;  1JAW A;  2GG5 A;  2GGC A;  2HOW A;  4S01 A;  4U69 A;  2Q96 A;  2Q94 A;  4ZNG A;  2EA2 A;  1WL6 A;  2BHA A;  2BN7 A;  4IKU A;  1XGN A;  2GG0 A;  2GGB A;  3PKA A;  2DFI A;  4U75 A;  3FM3 A;  4HXX A;  3TB5 A;  4ZWP A;  5CDV A;  4IF7 A;  2BH3 A;  3MAT A;  4U6C A;  4R60 A;  2GU5 A; 
#chains in the Genus database with same CATH topology
 4IKS A;  1QXY A;  4IPA A;  1XGS A;  3TAV A;  1MAT A;  4PNC A;  1R5G A;  2EVO A;  3IU9 A;  3PKB A;  4A6W A;  2B3K A;  2GG8 A;  1XGO A;  4U1B A;  3IG4 A;  1WL9 A;  2GG3 A;  2V6C A;  2OAZ A;  3CB5 A;  4FLI A;  4FUK A;  1C24 A;  5JHU A;  3PKC A;  5FCF A;  2BHB A;  2G6P A;  1WLR A;  2V3Z A;  2V3X A;  1B59 A;  1PV9 A;  2BHD A;  3FMQ A;  3L24 A;  3L7G A;  5JI6 A;  2Q93 A;  5FCH A;  1B6A A;  4U76 A;  2P98 A;  2GA2 A;  4OOK A;  1WY2 A;  4QR8 A;  1C21 A;  1YVM A;  2NQ7 A;  5CIK A;  1XGM A;  3RVA A;  5E5B A;  2GTX A;  2BWY A;  4FO7 A;  4IU6 A;  1YJ3 A;  2BWS A;  1C27 A;  2EVC A;  2V3Y A;  2OKN A;  4U71 A;  5D6E A;  2BHC A;  4KM3 A;  1YW7 A;  2EA4 A;  1C23 A;  1R5H A;  3CB6 A;  1KP0 A;  2GG7 A;  3MX6 A;  3PKD A;  4S2R P;  5CNX A;  2BWU A;  2IW2 A;  4FLL A;  2EVM A;  4B28 A;  4Z7M A;  4U6Z A;  4U6W A;  1C22 A;  4RZZ A;  2NQ6 A;  1W2M A;  2ADU A;  5JFR A;  2BWV A;  2GU4 A;  2Q92 A;  3CTZ A;  2B3L A;  1YW8 A;  2BB7 A;  2GG9 A;  2GU6 A;  4RZY A;  4S00 A;  1O0X A;  5D6F A;  4EGE A;  3BIT A;  1QXW A;  1W7V A;  1WN1 A;  4U73 A;  4FLK A;  1Y1N A;  4U6E A;  1BN5 A;  1BOA A;  1WKM A;  3PKE A;  3IU7 A;  4JUQ A;  1QXZ A;  2GU7 A;  2B3H A;  1KQ9 A;  1R58 A;  4A6V A;  4RGZ 1;  4U6J A;  1YW9 A;  2GG2 A;  3BIP A;  3Q6D A;  4FO8 A;  4IEC A;  1CHM A;  2MAT A;  2BWW A;  4FKC A;  2P9A A;  3S6B A;  2P99 A;  4IKT A;  4IKR A;  2GZ5 A;  4ZWU A;  3FMR A;  1N51 A;  4PV4 A;  4FLJ A;  1KQ0 A;  1XNZ A;  3IU8 A;  5CE6 A;  4ZWO A;  5CDL A;  1M35 A;  4IDY A;  1WBQ A;  2ZSG A;  2Q8K A;  5CLS A;  5CDE A;  4MAT A;  4S2T P;  3MR1 A;  3D27 A;  3ROR A;  2Q95 A;  1A16 A;  1QZY A;  4U70 A;  2BWX A;  3BIQ A;  2BWT A;  1JAW A;  2GG5 A;  2GGC A;  2HOW A;  4S01 A;  4U69 A;  2Q96 A;  2Q94 A;  4ZNG A;  2EA2 A;  1WL6 A;  2BHA A;  2BN7 A;  4IKU A;  1XGN A;  2GG0 A;  2GGB A;  3PKA A;  2DFI A;  4U75 A;  3FM3 A;  4HXX A;  3TB5 A;  4ZWP A;  5CDV A;  4IF7 A;  2BH3 A;  3MAT A;  4U6C A;  4R60 A;  2GU5 A; 
#chains in the Genus database with same CATH homology
 4IKS A;  1QXY A;  4IPA A;  1XGS A;  3TAV A;  1MAT A;  4PNC A;  1R5G A;  2EVO A;  3IU9 A;  3PKB A;  4A6W A;  2B3K A;  2GG8 A;  1XGO A;  4U1B A;  3IG4 A;  1WL9 A;  2GG3 A;  2V6C A;  2OAZ A;  3CB5 A;  4FLI A;  4FUK A;  1C24 A;  5JHU A;  3PKC A;  5FCF A;  2BHB A;  2G6P A;  1WLR A;  2V3Z A;  2V3X A;  1B59 A;  1PV9 A;  2BHD A;  3FMQ A;  3L24 A;  3L7G A;  5JI6 A;  2Q93 A;  5FCH A;  1B6A A;  4U76 A;  2P98 A;  2GA2 A;  4OOK A;  1WY2 A;  4QR8 A;  1C21 A;  1YVM A;  2NQ7 A;  5CIK A;  1XGM A;  3RVA A;  5E5B A;  2GTX A;  2BWY A;  4FO7 A;  4IU6 A;  1YJ3 A;  2BWS A;  1C27 A;  2EVC A;  2V3Y A;  2OKN A;  4U71 A;  5D6E A;  2BHC A;  4KM3 A;  1YW7 A;  2EA4 A;  1C23 A;  1R5H A;  3CB6 A;  1KP0 A;  2GG7 A;  3MX6 A;  3PKD A;  4S2R P;  5CNX A;  2BWU A;  2IW2 A;  4FLL A;  2EVM A;  4B28 A;  4Z7M A;  4U6Z A;  4U6W A;  1C22 A;  4RZZ A;  2NQ6 A;  1W2M A;  2ADU A;  5JFR A;  2BWV A;  2GU4 A;  2Q92 A;  3CTZ A;  2B3L A;  1YW8 A;  2BB7 A;  2GG9 A;  2GU6 A;  4RZY A;  4S00 A;  1O0X A;  5D6F A;  4EGE A;  3BIT A;  1QXW A;  1W7V A;  1WN1 A;  4U73 A;  4FLK A;  1Y1N A;  4U6E A;  1BN5 A;  1BOA A;  1WKM A;  3PKE A;  3IU7 A;  4JUQ A;  1QXZ A;  2GU7 A;  2B3H A;  1KQ9 A;  1R58 A;  4A6V A;  4RGZ 1;  4U6J A;  1YW9 A;  2GG2 A;  3BIP A;  3Q6D A;  4FO8 A;  4IEC A;  1CHM A;  2MAT A;  2BWW A;  4FKC A;  2P9A A;  3S6B A;  2P99 A;  4IKT A;  4IKR A;  2GZ5 A;  4ZWU A;  3FMR A;  1N51 A;  4PV4 A;  4FLJ A;  1KQ0 A;  1XNZ A;  3IU8 A;  5CE6 A;  4ZWO A;  5CDL A;  1M35 A;  4IDY A;  1WBQ A;  2ZSG A;  2Q8K A;  5CLS A;  5CDE A;  4MAT A;  4S2T P;  3MR1 A;  3D27 A;  3ROR A;  2Q95 A;  1A16 A;  1QZY A;  4U70 A;  2BWX A;  3BIQ A;  2BWT A;  1JAW A;  2GG5 A;  2GGC A;  2HOW A;  4S01 A;  4U69 A;  2Q96 A;  2Q94 A;  4ZNG A;  2EA2 A;  1WL6 A;  2BHA A;  2BN7 A;  4IKU A;  1XGN A;  2GG0 A;  2GGB A;  3PKA A;  2DFI A;  4U75 A;  3FM3 A;  4HXX A;  3TB5 A;  4ZWP A;  5CDV A;  4IF7 A;  2BH3 A;  3MAT A;  4U6C A;  4R60 A;  2GU5 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...