4OOKA

Third metal bound m.tuberculosis methionine aminopeptidase
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
282
structure length
282
Chain Sequence
RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCCTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTAL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Mycobacterium tuberculosis
publication title Selective targeting of the conserved active site cysteine of Mycobacterium tuberculosis methionine aminopeptidase with electrophilic reagents
pubmed doi rcsb
molecule keywords Methionine aminopeptidase 2
total genus 88
structure length 282
sequence length 282
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2014-02-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4ookA01
3IU8A 2EVOA 4U69A 1A16A 2OAZA 4Z7MA 1B59A 2MATA 4HXXA 4IKSA 4PNCA 3RORA 4MATA 1QXYA 4IKTA 3Q6DA 2HOWA 3IG4A 5FCHA 4QR8A 5FCFA 1JAWA 2GU6A 4IU6A 4S01A 2BHBA 2B3HA 5D6EA 3TAVA 1WL9A 4IF7A 2GZ5A 5CNXA 1QXWA 1YW9A 4U6ZA 3MX6A 5E5BA 1WKMA 2EVCA 4OOKA 1W7VA 5CLSA 5JI6A 1WN1A 3PKDA 4PV4A 2BHDA 4ZWOA 5CDLA 4RZYA 5CE6A 4U6CA 1WLRA 2GA2A 1KQ9A 4B28A 3S6BA 4FLJA 4ZNGA 2B3KA 1QZYA 4S2RP 4IPAA 2P99A 4A6WA 1R5GA 2BWVA 3MR1A 4FLKA 2EVMA 2NQ7A 4U6WA 1C23A 4JUQA 1R58A 1N51A 2Q93A 3BIQA 4FKCA 2BWTA 2BWSA 2GTXA 4KM3A 1YJ3A 2GG5A 3PKCA 3BITA 3TB5A 5JFRA 2GU5A 2Q94A 3IU7A 1B6AA 2P9AA 1R5HA 1XNZA 1WY2A 2ZSGA 1C24A 2GG7A 1XGOA 3L7GA 1MATA 2OKNA 2V3ZA 1WL6A 2V3YA 4FLIA 4U71A 3IU9A 4FUKA 3FM3A 1Y1NA 2B3LA 2BH3A 2Q95A 4RGZ1 4U76A 5CDEA 3RVAA 2EA2A 2BWUA 2GGBA 1QXZA 2BN7A 2P98A 2GG9A 4IKUA 1XGNA 1PV9A 2V3XA 4U70A 1M35A 3PKEA 2BWXA 2NQ6A 1BOAA 2ADUA 4RZZA 1KP0A 4U1BA 2GU4A 1W2MA 2EA4A 2G6PA 5JHUA 4U6EA 4EGEA 2GG2A 5CIKA 2GGCA 1YVMA 3BIPA 4U75A 4ZWUA 2Q92A 1C22A 1YW8A 1C27A 1YW7A 1BN5A 3CB6A 4IDYA 3CB5A 1C21A 2BWYA 3PKBA 4IECA 1CHMA 1XGSA 3FMQA 2IW2A 2DFIA 2GG8A 4FO8A 2BHCA 4A6VA 3PKAA 3FMRA 2GU7A 1WBQA 1O0XA 4FLLA 4S00A 4FO7A 1KQ0A 4IKRA 3MATA 2Q96A 2Q8KA 5CDVA 4ZWPA 2BB7A 2BHAA 4S2TP 4U73A 5D6FA 1XGMA 4R60A 3CTZA 3D27A 4U6JA 2V6CA 2GG3A 3L24A 2BWWA 2GG0A
chains in the Genus database with same CATH superfamily
3IU8A 2EVOA 4U69A 1A16A 2OAZA 4Z7MA 1B59A 2MATA 4HXXA 4IKSA 4PNCA 3RORA 4MATA 1QXYA 4IKTA 3Q6DA 2HOWA 3IG4A 5FCHA 4QR8A 5FCFA 1JAWA 2GU6A 4IU6A 4S01A 2BHBA 2B3HA 5D6EA 3TAVA 1WL9A 4IF7A 2GZ5A 5CNXA 1QXWA 1YW9A 4U6ZA 3MX6A 5E5BA 1WKMA 2EVCA 4OOKA 1W7VA 5CLSA 5JI6A 1WN1A 3PKDA 4PV4A 2BHDA 4ZWOA 5CDLA 4RZYA 5CE6A 4U6CA 1WLRA 2GA2A 1KQ9A 4B28A 3S6BA 4FLJA 4ZNGA 2B3KA 1QZYA 4S2RP 4IPAA 2P99A 4A6WA 1R5GA 2BWVA 3MR1A 4FLKA 2EVMA 2NQ7A 4U6WA 1C23A 4JUQA 1R58A 1N51A 2Q93A 3BIQA 4FKCA 2BWTA 2BWSA 2GTXA 4KM3A 1YJ3A 2GG5A 3PKCA 3BITA 3TB5A 5JFRA 2GU5A 2Q94A 3IU7A 1B6AA 2P9AA 1R5HA 1XNZA 1WY2A 2ZSGA 1C24A 2GG7A 1XGOA 3L7GA 1MATA 2OKNA 2V3ZA 1WL6A 2V3YA 4FLIA 4U71A 3IU9A 4FUKA 3FM3A 1Y1NA 2B3LA 2BH3A 2Q95A 4RGZ1 4U76A 5CDEA 3RVAA 2EA2A 2BWUA 2GGBA 1QXZA 2BN7A 2P98A 2GG9A 4IKUA 1XGNA 1PV9A 2V3XA 4U70A 1M35A 3PKEA 2BWXA 2NQ6A 1BOAA 2ADUA 4RZZA 1KP0A 4U1BA 2GU4A 1W2MA 2EA4A 2G6PA 5JHUA 4U6EA 4EGEA 2GG2A 5CIKA 2GGCA 1YVMA 3BIPA 4U75A 4ZWUA 2Q92A 1C22A 1YW8A 1C27A 1YW7A 1BN5A 3CB6A 4IDYA 3CB5A 1C21A 2BWYA 3PKBA 4IECA 1CHMA 1XGSA 3FMQA 2IW2A 2DFIA 2GG8A 4FO8A 2BHCA 4A6VA 3PKAA 3FMRA 2GU7A 1WBQA 1O0XA 4FLLA 4S00A 4FO7A 1KQ0A 4IKRA 3MATA 2Q96A 2Q8KA 5CDVA 4ZWPA 2BB7A 2BHAA 4S2TP 4U73A 5D6FA 1XGMA 4R60A 3CTZA 3D27A 4U6JA 2V6CA 2GG3A 3L24A 2BWWA 2GG0A
chains in the Genus database with same CATH topology
3IU8A 2EVOA 4U69A 1A16A 2OAZA 4Z7MA 1B59A 2MATA 4HXXA 4IKSA 4PNCA 3RORA 4MATA 1QXYA 4IKTA 3Q6DA 2HOWA 3IG4A 5FCHA 4QR8A 5FCFA 1JAWA 2GU6A 4IU6A 4S01A 2BHBA 2B3HA 5D6EA 3TAVA 1WL9A 4IF7A 2GZ5A 5CNXA 1QXWA 1YW9A 4U6ZA 3MX6A 5E5BA 1WKMA 2EVCA 4OOKA 1W7VA 5CLSA 5JI6A 1WN1A 3PKDA 4PV4A 2BHDA 4ZWOA 5CDLA 4RZYA 5CE6A 4U6CA 1WLRA 2GA2A 1KQ9A 4B28A 3S6BA 4FLJA 4ZNGA 2B3KA 1QZYA 4S2RP 4IPAA 2P99A 4A6WA 1R5GA 2BWVA 3MR1A 4FLKA 2EVMA 2NQ7A 4U6WA 1C23A 4JUQA 1R58A 1N51A 2Q93A 3BIQA 4FKCA 2BWTA 2BWSA 2GTXA 4KM3A 1YJ3A 2GG5A 3PKCA 3BITA 3TB5A 5JFRA 2GU5A 2Q94A 3IU7A 1B6AA 2P9AA 1R5HA 1XNZA 1WY2A 2ZSGA 1C24A 2GG7A 1XGOA 3L7GA 1MATA 2OKNA 2V3ZA 1WL6A 2V3YA 4FLIA 4U71A 3IU9A 4FUKA 3FM3A 1Y1NA 2B3LA 2BH3A 2Q95A 4RGZ1 4U76A 5CDEA 3RVAA 2EA2A 2BWUA 2GGBA 1QXZA 2BN7A 2P98A 2GG9A 4IKUA 1XGNA 1PV9A 2V3XA 4U70A 1M35A 3PKEA 2BWXA 2NQ6A 1BOAA 2ADUA 4RZZA 1KP0A 4U1BA 2GU4A 1W2MA 2EA4A 2G6PA 5JHUA 4U6EA 4EGEA 2GG2A 5CIKA 2GGCA 1YVMA 3BIPA 4U75A 4ZWUA 2Q92A 1C22A 1YW8A 1C27A 1YW7A 1BN5A 3CB6A 4IDYA 3CB5A 1C21A 2BWYA 3PKBA 4IECA 1CHMA 1XGSA 3FMQA 2IW2A 2DFIA 2GG8A 4FO8A 2BHCA 4A6VA 3PKAA 3FMRA 2GU7A 1WBQA 1O0XA 4FLLA 4S00A 4FO7A 1KQ0A 4IKRA 3MATA 2Q96A 2Q8KA 5CDVA 4ZWPA 2BB7A 2BHAA 4S2TP 4U73A 5D6FA 1XGMA 4R60A 3CTZA 3D27A 4U6JA 2V6CA 2GG3A 3L24A 2BWWA 2GG0A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3IU8 A;  2EVO A;  4U69 A;  1A16 A;  2OAZ A;  4Z7M A;  1B59 A;  2MAT A;  4HXX A;  4IKS A;  4PNC A;  3ROR A;  4MAT A;  1QXY A;  4IKT A;  3Q6D A;  2HOW A;  3IG4 A;  5FCH A;  4QR8 A;  5FCF A;  1JAW A;  2GU6 A;  4IU6 A;  4S01 A;  2BHB A;  2B3H A;  5D6E A;  3TAV A;  1WL9 A;  4IF7 A;  2GZ5 A;  5CNX A;  1QXW A;  1YW9 A;  4U6Z A;  3MX6 A;  5E5B A;  1WKM A;  2EVC A;  4OOK A;  1W7V A;  5CLS A;  5JI6 A;  1WN1 A;  3PKD A;  4PV4 A;  2BHD A;  4ZWO A;  5CDL A;  4RZY A;  5CE6 A;  4U6C A;  1WLR A;  2GA2 A;  1KQ9 A;  4B28 A;  3S6B A;  4FLJ A;  4ZNG A;  2B3K A;  1QZY A;  4S2R P;  4IPA A;  2P99 A;  4A6W A;  1R5G A;  2BWV A;  3MR1 A;  4FLK A;  2EVM A;  2NQ7 A;  4U6W A;  1C23 A;  4JUQ A;  1R58 A;  1N51 A;  2Q93 A;  3BIQ A;  4FKC A;  2BWT A;  2BWS A;  2GTX A;  4KM3 A;  1YJ3 A;  2GG5 A;  3PKC A;  3BIT A;  3TB5 A;  5JFR A;  2GU5 A;  2Q94 A;  3IU7 A;  1B6A A;  2P9A A;  1R5H A;  1XNZ A;  1WY2 A;  2ZSG A;  1C24 A;  2GG7 A;  1XGO A;  3L7G A;  1MAT A;  2OKN A;  2V3Z A;  1WL6 A;  2V3Y A;  4FLI A;  4U71 A;  3IU9 A;  4FUK A;  3FM3 A;  1Y1N A;  2B3L A;  2BH3 A;  2Q95 A;  4RGZ 1;  4U76 A;  5CDE A;  3RVA A;  2EA2 A;  2BWU A;  2GGB A;  1QXZ A;  2BN7 A;  2P98 A;  2GG9 A;  4IKU A;  1XGN A;  1PV9 A;  2V3X A;  4U70 A;  1M35 A;  3PKE A;  2BWX A;  2NQ6 A;  1BOA A;  2ADU A;  4RZZ A;  1KP0 A;  4U1B A;  2GU4 A;  1W2M A;  2EA4 A;  2G6P A;  5JHU A;  4U6E A;  4EGE A;  2GG2 A;  5CIK A;  2GGC A;  1YVM A;  3BIP A;  4U75 A;  4ZWU A;  2Q92 A;  1C22 A;  1YW8 A;  1C27 A;  1YW7 A;  1BN5 A;  3CB6 A;  4IDY A;  3CB5 A;  1C21 A;  2BWY A;  3PKB A;  4IEC A;  1CHM A;  1XGS A;  3FMQ A;  2IW2 A;  2DFI A;  2GG8 A;  4FO8 A;  2BHC A;  4A6V A;  3PKA A;  3FMR A;  2GU7 A;  1WBQ A;  1O0X A;  4FLL A;  4S00 A;  4FO7 A;  1KQ0 A;  4IKR A;  3MAT A;  2Q96 A;  2Q8K A;  5CDV A;  4ZWP A;  2BB7 A;  2BHA A;  4S2T P;  4U73 A;  5D6F A;  1XGM A;  4R60 A;  3CTZ A;  3D27 A;  4U6J A;  2V6C A;  2GG3 A;  3L24 A;  2BWW A;  2GG0 A; 
#chains in the Genus database with same CATH topology
 3IU8 A;  2EVO A;  4U69 A;  1A16 A;  2OAZ A;  4Z7M A;  1B59 A;  2MAT A;  4HXX A;  4IKS A;  4PNC A;  3ROR A;  4MAT A;  1QXY A;  4IKT A;  3Q6D A;  2HOW A;  3IG4 A;  5FCH A;  4QR8 A;  5FCF A;  1JAW A;  2GU6 A;  4IU6 A;  4S01 A;  2BHB A;  2B3H A;  5D6E A;  3TAV A;  1WL9 A;  4IF7 A;  2GZ5 A;  5CNX A;  1QXW A;  1YW9 A;  4U6Z A;  3MX6 A;  5E5B A;  1WKM A;  2EVC A;  4OOK A;  1W7V A;  5CLS A;  5JI6 A;  1WN1 A;  3PKD A;  4PV4 A;  2BHD A;  4ZWO A;  5CDL A;  4RZY A;  5CE6 A;  4U6C A;  1WLR A;  2GA2 A;  1KQ9 A;  4B28 A;  3S6B A;  4FLJ A;  4ZNG A;  2B3K A;  1QZY A;  4S2R P;  4IPA A;  2P99 A;  4A6W A;  1R5G A;  2BWV A;  3MR1 A;  4FLK A;  2EVM A;  2NQ7 A;  4U6W A;  1C23 A;  4JUQ A;  1R58 A;  1N51 A;  2Q93 A;  3BIQ A;  4FKC A;  2BWT A;  2BWS A;  2GTX A;  4KM3 A;  1YJ3 A;  2GG5 A;  3PKC A;  3BIT A;  3TB5 A;  5JFR A;  2GU5 A;  2Q94 A;  3IU7 A;  1B6A A;  2P9A A;  1R5H A;  1XNZ A;  1WY2 A;  2ZSG A;  1C24 A;  2GG7 A;  1XGO A;  3L7G A;  1MAT A;  2OKN A;  2V3Z A;  1WL6 A;  2V3Y A;  4FLI A;  4U71 A;  3IU9 A;  4FUK A;  3FM3 A;  1Y1N A;  2B3L A;  2BH3 A;  2Q95 A;  4RGZ 1;  4U76 A;  5CDE A;  3RVA A;  2EA2 A;  2BWU A;  2GGB A;  1QXZ A;  2BN7 A;  2P98 A;  2GG9 A;  4IKU A;  1XGN A;  1PV9 A;  2V3X A;  4U70 A;  1M35 A;  3PKE A;  2BWX A;  2NQ6 A;  1BOA A;  2ADU A;  4RZZ A;  1KP0 A;  4U1B A;  2GU4 A;  1W2M A;  2EA4 A;  2G6P A;  5JHU A;  4U6E A;  4EGE A;  2GG2 A;  5CIK A;  2GGC A;  1YVM A;  3BIP A;  4U75 A;  4ZWU A;  2Q92 A;  1C22 A;  1YW8 A;  1C27 A;  1YW7 A;  1BN5 A;  3CB6 A;  4IDY A;  3CB5 A;  1C21 A;  2BWY A;  3PKB A;  4IEC A;  1CHM A;  1XGS A;  3FMQ A;  2IW2 A;  2DFI A;  2GG8 A;  4FO8 A;  2BHC A;  4A6V A;  3PKA A;  3FMR A;  2GU7 A;  1WBQ A;  1O0X A;  4FLL A;  4S00 A;  4FO7 A;  1KQ0 A;  4IKR A;  3MAT A;  2Q96 A;  2Q8K A;  5CDV A;  4ZWP A;  2BB7 A;  2BHA A;  4S2T P;  4U73 A;  5D6F A;  1XGM A;  4R60 A;  3CTZ A;  3D27 A;  4U6J A;  2V6C A;  2GG3 A;  3L24 A;  2BWW A;  2GG0 A; 
#chains in the Genus database with same CATH homology
 3IU8 A;  2EVO A;  4U69 A;  1A16 A;  2OAZ A;  4Z7M A;  1B59 A;  2MAT A;  4HXX A;  4IKS A;  4PNC A;  3ROR A;  4MAT A;  1QXY A;  4IKT A;  3Q6D A;  2HOW A;  3IG4 A;  5FCH A;  4QR8 A;  5FCF A;  1JAW A;  2GU6 A;  4IU6 A;  4S01 A;  2BHB A;  2B3H A;  5D6E A;  3TAV A;  1WL9 A;  4IF7 A;  2GZ5 A;  5CNX A;  1QXW A;  1YW9 A;  4U6Z A;  3MX6 A;  5E5B A;  1WKM A;  2EVC A;  4OOK A;  1W7V A;  5CLS A;  5JI6 A;  1WN1 A;  3PKD A;  4PV4 A;  2BHD A;  4ZWO A;  5CDL A;  4RZY A;  5CE6 A;  4U6C A;  1WLR A;  2GA2 A;  1KQ9 A;  4B28 A;  3S6B A;  4FLJ A;  4ZNG A;  2B3K A;  1QZY A;  4S2R P;  4IPA A;  2P99 A;  4A6W A;  1R5G A;  2BWV A;  3MR1 A;  4FLK A;  2EVM A;  2NQ7 A;  4U6W A;  1C23 A;  4JUQ A;  1R58 A;  1N51 A;  2Q93 A;  3BIQ A;  4FKC A;  2BWT A;  2BWS A;  2GTX A;  4KM3 A;  1YJ3 A;  2GG5 A;  3PKC A;  3BIT A;  3TB5 A;  5JFR A;  2GU5 A;  2Q94 A;  3IU7 A;  1B6A A;  2P9A A;  1R5H A;  1XNZ A;  1WY2 A;  2ZSG A;  1C24 A;  2GG7 A;  1XGO A;  3L7G A;  1MAT A;  2OKN A;  2V3Z A;  1WL6 A;  2V3Y A;  4FLI A;  4U71 A;  3IU9 A;  4FUK A;  3FM3 A;  1Y1N A;  2B3L A;  2BH3 A;  2Q95 A;  4RGZ 1;  4U76 A;  5CDE A;  3RVA A;  2EA2 A;  2BWU A;  2GGB A;  1QXZ A;  2BN7 A;  2P98 A;  2GG9 A;  4IKU A;  1XGN A;  1PV9 A;  2V3X A;  4U70 A;  1M35 A;  3PKE A;  2BWX A;  2NQ6 A;  1BOA A;  2ADU A;  4RZZ A;  1KP0 A;  4U1B A;  2GU4 A;  1W2M A;  2EA4 A;  2G6P A;  5JHU A;  4U6E A;  4EGE A;  2GG2 A;  5CIK A;  2GGC A;  1YVM A;  3BIP A;  4U75 A;  4ZWU A;  2Q92 A;  1C22 A;  1YW8 A;  1C27 A;  1YW7 A;  1BN5 A;  3CB6 A;  4IDY A;  3CB5 A;  1C21 A;  2BWY A;  3PKB A;  4IEC A;  1CHM A;  1XGS A;  3FMQ A;  2IW2 A;  2DFI A;  2GG8 A;  4FO8 A;  2BHC A;  4A6V A;  3PKA A;  3FMR A;  2GU7 A;  1WBQ A;  1O0X A;  4FLL A;  4S00 A;  4FO7 A;  1KQ0 A;  4IKR A;  3MAT A;  2Q96 A;  2Q8K A;  5CDV A;  4ZWP A;  2BB7 A;  2BHA A;  4S2T P;  4U73 A;  5D6F A;  1XGM A;  4R60 A;  3CTZ A;  3D27 A;  4U6J A;  2V6C A;  2GG3 A;  3L24 A;  2BWW A;  2GG0 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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