3TB5A

Crystal structure of the enterococcus faecalis methionine aminopeptidase apo form
Total Genus 87

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
87
sequence length
254
structure length
254
Chain Sequence
MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGYEGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDLKGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMDPNGWTAYTEDGGLSCQYEHSLAITKEGPRILTSQGEELTY

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTII6 (193-196)AH1 (7-30)S19 (243-244)S6 (89-99)TII1 (32-35)S1 (35-36)S5 (84-85)AH2 (37-51)S2 (53-55)TI1 (55-58)3H1 (60-62)TII2 (57-60)S3 (67-71)S4 (74-76)S17 (228-230)TII'1 (71-74)S16 (220-222)TIV7 (216-219)TII3 (86-89)S7 (102-112)S18 (233-237)AH3 (117-136)AH4 (143-157)TII7 (250-253)O1 (136-138)S8 (141-142)TII4 (138-141)S12 (191-192)TIV5 (181-184)S14 (203-205)S9 (160-161)TIV2 (162-165)S10 (167-169)S13 (196-200)TIV3 (170-173)TVIII1 (173-176)S11 (176-180)TII5 (185-188)TI4 (238-241)TIV6 (205-208)TI3 (222-225)S15 (211-213)TI2 (214-217)TI5 (244-247)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Enterococcus faecalis
publication title Structural studies of Enterococcus faecalis methionine aminopeptidase and design of microbe specific 2,2'-bipyridine based inhibitors
doi rcsb
molecule keywords Methionine aminopeptidase
total genus 87
structure length 254
sequence length 254
chains with identical sequence B, C
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2011-08-05
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3tb5A00
1C24A 2V3YA 5CNXA 2DFIA 4R60A 1B59A 4PNCA 2GU7A 2OAZA 1B6AA 4U1BA 4U76A 1C27A 4QR8A 1WL6A 5E5BA 2IW2A 1WLRA 4U71A 3PKDA 2BWTA 5CDVA 4KM3A 3RORA 1KP0A 3BIPA 4S2RP 4U75A 3CB6A 2GU6A 2GG5A 3Q6DA 5CDLA 5CIKA 2Q8KA 4IU6A 5CDEA 2BWWA 4IECA 4S01A 3FM3A 4FLKA 5CLSA 4IKUA 1BOAA 5JHUA 1R58A 2GG2A 2GA2A 1C21A 2Q95A 4IDYA 1W2MA 5D6EA 1XNZA 4PV4A 1BN5A 1JAWA 2B3LA 1PV9A 2EVCA 3MR1A 4B28A 4OOKA 2GZ5A 2P98A 4FUKA 4U69A 3PKBA 4U70A 4U6WA 2BHBA 4IKRA 1XGMA 1XGSA 2Q92A 1QXYA 3IU8A 2BB7A 4IF7A 2BHCA 2EVOA 1R5GA 2BH3A 2HOWA 4ZWUA 4U6ZA 2OKNA 4FO7A 4U6CA 1YW7A 4RZYA 4A6WA 1WY2A 2BWYA 4Z7MA 2Q93A 5D6FA 2B3HA 1QXZA 2V6CA 4IKTA 2GTXA 4ZNGA 4ZWPA 2GG0A 2MATA 2G6PA 3FMRA 3D27A 1WKMA 3TB5A 1WL9A 1A16A 1YW8A 2B3KA 2BWUA 2EA4A 2ZSGA 1YVMA 3IU9A 4U6EA 2GG3A 4JUQA 2NQ7A 4FLIA 2BN7A 2GU5A 3RVAA 1C23A 1KQ0A 3IU7A 1MATA 2GG8A 3TAVA 4HXXA 1WBQA 2Q96A 3PKEA 4RGZ1 5JFRA 2V3ZA 2EVMA 5FCFA 2V3XA 3MATA 5JI6A 2BWXA 5CE6A 4FKCA 2GG9A 2EA2A 1QZYA 3CTZA 1KQ9A 2BHAA 2GGBA 4S2TP 4A6VA 1C22A 1XGNA 4MATA 4S00A 1N51A 2GU4A 2NQ6A 1XGOA 1YW9A 1O0XA 4RZZA 2GGCA 3IG4A 2P99A 3CB5A 3FMQA 4U6JA 4IPAA 5FCHA 4ZWOA 4U73A 2ADUA 4IKSA 3L24A 4FO8A 2P9AA 2BWSA 2GG7A 1W7VA 4FLLA 1QXWA 3PKCA 3BIQA 4EGEA 2Q94A 4FLJA 3S6BA 3L7GA 1WN1A 1CHMA 3PKAA 3MX6A 1YJ3A 2BWVA 2BHDA 1R5HA 3BITA 1M35A 1Y1NA
chains in the Genus database with same CATH superfamily
1C24A 2V3YA 5CNXA 2DFIA 4R60A 1B59A 4PNCA 2GU7A 2OAZA 1B6AA 4U1BA 4U76A 1C27A 4QR8A 1WL6A 5E5BA 2IW2A 1WLRA 4U71A 3PKDA 2BWTA 5CDVA 4KM3A 3RORA 1KP0A 3BIPA 4S2RP 4U75A 3CB6A 2GU6A 2GG5A 3Q6DA 5CDLA 5CIKA 2Q8KA 4IU6A 5CDEA 2BWWA 4IECA 4S01A 3FM3A 4FLKA 5CLSA 4IKUA 1BOAA 5JHUA 1R58A 2GG2A 2GA2A 1C21A 2Q95A 4IDYA 1W2MA 5D6EA 1XNZA 4PV4A 1BN5A 1JAWA 2B3LA 1PV9A 2EVCA 3MR1A 4B28A 4OOKA 2GZ5A 2P98A 4FUKA 4U69A 3PKBA 4U70A 4U6WA 2BHBA 4IKRA 1XGMA 1XGSA 2Q92A 1QXYA 3IU8A 2BB7A 4IF7A 2BHCA 2EVOA 1R5GA 2BH3A 2HOWA 4ZWUA 4U6ZA 2OKNA 4FO7A 4U6CA 1YW7A 4RZYA 4A6WA 1WY2A 2BWYA 4Z7MA 2Q93A 5D6FA 2B3HA 1QXZA 2V6CA 4IKTA 2GTXA 4ZNGA 4ZWPA 2GG0A 2MATA 2G6PA 3FMRA 3D27A 1WKMA 3TB5A 1WL9A 1A16A 1YW8A 2B3KA 2BWUA 2EA4A 2ZSGA 1YVMA 3IU9A 4U6EA 2GG3A 4JUQA 2NQ7A 4FLIA 2BN7A 2GU5A 3RVAA 1C23A 1KQ0A 3IU7A 1MATA 2GG8A 3TAVA 4HXXA 1WBQA 2Q96A 3PKEA 4RGZ1 5JFRA 2V3ZA 2EVMA 5FCFA 2V3XA 3MATA 5JI6A 2BWXA 5CE6A 4FKCA 2GG9A 2EA2A 1QZYA 3CTZA 1KQ9A 2BHAA 2GGBA 4S2TP 4A6VA 1C22A 1XGNA 4MATA 4S00A 1N51A 2GU4A 2NQ6A 1XGOA 1YW9A 1O0XA 4RZZA 2GGCA 3IG4A 2P99A 3CB5A 3FMQA 4U6JA 4IPAA 5FCHA 4ZWOA 4U73A 2ADUA 4IKSA 3L24A 4FO8A 2P9AA 2BWSA 2GG7A 1W7VA 4FLLA 1QXWA 3PKCA 3BIQA 4EGEA 2Q94A 4FLJA 3S6BA 3L7GA 1WN1A 1CHMA 3PKAA 3MX6A 1YJ3A 2BWVA 2BHDA 1R5HA 3BITA 1M35A 1Y1NA
chains in the Genus database with same CATH topology
1C24A 2V3YA 5CNXA 2DFIA 4R60A 1B59A 4PNCA 2GU7A 2OAZA 1B6AA 4U1BA 4U76A 1C27A 4QR8A 1WL6A 5E5BA 2IW2A 1WLRA 4U71A 3PKDA 2BWTA 5CDVA 4KM3A 3RORA 1KP0A 3BIPA 4S2RP 4U75A 3CB6A 2GU6A 2GG5A 3Q6DA 5CDLA 5CIKA 2Q8KA 4IU6A 5CDEA 2BWWA 4IECA 4S01A 3FM3A 4FLKA 5CLSA 4IKUA 1BOAA 5JHUA 1R58A 2GG2A 2GA2A 1C21A 2Q95A 4IDYA 1W2MA 5D6EA 1XNZA 4PV4A 1BN5A 1JAWA 2B3LA 1PV9A 2EVCA 3MR1A 4B28A 4OOKA 2GZ5A 2P98A 4FUKA 4U69A 3PKBA 4U70A 4U6WA 2BHBA 4IKRA 1XGMA 1XGSA 2Q92A 1QXYA 3IU8A 2BB7A 4IF7A 2BHCA 2EVOA 1R5GA 2BH3A 2HOWA 4ZWUA 4U6ZA 2OKNA 4FO7A 4U6CA 1YW7A 4RZYA 4A6WA 1WY2A 2BWYA 4Z7MA 2Q93A 5D6FA 2B3HA 1QXZA 2V6CA 4IKTA 2GTXA 4ZNGA 4ZWPA 2GG0A 2MATA 2G6PA 3FMRA 3D27A 1WKMA 3TB5A 1WL9A 1A16A 1YW8A 2B3KA 2BWUA 2EA4A 2ZSGA 1YVMA 3IU9A 4U6EA 2GG3A 4JUQA 2NQ7A 4FLIA 2BN7A 2GU5A 3RVAA 1C23A 1KQ0A 3IU7A 1MATA 2GG8A 3TAVA 4HXXA 1WBQA 2Q96A 3PKEA 4RGZ1 5JFRA 2V3ZA 2EVMA 5FCFA 2V3XA 3MATA 5JI6A 2BWXA 5CE6A 4FKCA 2GG9A 2EA2A 1QZYA 3CTZA 1KQ9A 2BHAA 2GGBA 4S2TP 4A6VA 1C22A 1XGNA 4MATA 4S00A 1N51A 2GU4A 2NQ6A 1XGOA 1YW9A 1O0XA 4RZZA 2GGCA 3IG4A 2P99A 3CB5A 3FMQA 4U6JA 4IPAA 5FCHA 4ZWOA 4U73A 2ADUA 4IKSA 3L24A 4FO8A 2P9AA 2BWSA 2GG7A 1W7VA 4FLLA 1QXWA 3PKCA 3BIQA 4EGEA 2Q94A 4FLJA 3S6BA 3L7GA 1WN1A 1CHMA 3PKAA 3MX6A 1YJ3A 2BWVA 2BHDA 1R5HA 3BITA 1M35A 1Y1NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1C24 A;  2V3Y A;  5CNX A;  2DFI A;  4R60 A;  1B59 A;  4PNC A;  2GU7 A;  2OAZ A;  1B6A A;  4U1B A;  4U76 A;  1C27 A;  4QR8 A;  1WL6 A;  5E5B A;  2IW2 A;  1WLR A;  4U71 A;  3PKD A;  2BWT A;  5CDV A;  4KM3 A;  3ROR A;  1KP0 A;  3BIP A;  4S2R P;  4U75 A;  3CB6 A;  2GU6 A;  2GG5 A;  3Q6D A;  5CDL A;  5CIK A;  2Q8K A;  4IU6 A;  5CDE A;  2BWW A;  4IEC A;  4S01 A;  3FM3 A;  4FLK A;  5CLS A;  4IKU A;  1BOA A;  5JHU A;  1R58 A;  2GG2 A;  2GA2 A;  1C21 A;  2Q95 A;  4IDY A;  1W2M A;  5D6E A;  1XNZ A;  4PV4 A;  1BN5 A;  1JAW A;  2B3L A;  1PV9 A;  2EVC A;  3MR1 A;  4B28 A;  4OOK A;  2GZ5 A;  2P98 A;  4FUK A;  4U69 A;  3PKB A;  4U70 A;  4U6W A;  2BHB A;  4IKR A;  1XGM A;  1XGS A;  2Q92 A;  1QXY A;  3IU8 A;  2BB7 A;  4IF7 A;  2BHC A;  2EVO A;  1R5G A;  2BH3 A;  2HOW A;  4ZWU A;  4U6Z A;  2OKN A;  4FO7 A;  4U6C A;  1YW7 A;  4RZY A;  4A6W A;  1WY2 A;  2BWY A;  4Z7M A;  2Q93 A;  5D6F A;  2B3H A;  1QXZ A;  2V6C A;  4IKT A;  2GTX A;  4ZNG A;  4ZWP A;  2GG0 A;  2MAT A;  2G6P A;  3FMR A;  3D27 A;  1WKM A;  3TB5 A;  1WL9 A;  1A16 A;  1YW8 A;  2B3K A;  2BWU A;  2EA4 A;  2ZSG A;  1YVM A;  3IU9 A;  4U6E A;  2GG3 A;  4JUQ A;  2NQ7 A;  4FLI A;  2BN7 A;  2GU5 A;  3RVA A;  1C23 A;  1KQ0 A;  3IU7 A;  1MAT A;  2GG8 A;  3TAV A;  4HXX A;  1WBQ A;  2Q96 A;  3PKE A;  4RGZ 1;  5JFR A;  2V3Z A;  2EVM A;  5FCF A;  2V3X A;  3MAT A;  5JI6 A;  2BWX A;  5CE6 A;  4FKC A;  2GG9 A;  2EA2 A;  1QZY A;  3CTZ A;  1KQ9 A;  2BHA A;  2GGB A;  4S2T P;  4A6V A;  1C22 A;  1XGN A;  4MAT A;  4S00 A;  1N51 A;  2GU4 A;  2NQ6 A;  1XGO A;  1YW9 A;  1O0X A;  4RZZ A;  2GGC A;  3IG4 A;  2P99 A;  3CB5 A;  3FMQ A;  4U6J A;  4IPA A;  5FCH A;  4ZWO A;  4U73 A;  2ADU A;  4IKS A;  3L24 A;  4FO8 A;  2P9A A;  2BWS A;  2GG7 A;  1W7V A;  4FLL A;  1QXW A;  3PKC A;  3BIQ A;  4EGE A;  2Q94 A;  4FLJ A;  3S6B A;  3L7G A;  1WN1 A;  1CHM A;  3PKA A;  3MX6 A;  1YJ3 A;  2BWV A;  2BHD A;  1R5H A;  3BIT A;  1M35 A;  1Y1N A; 
#chains in the Genus database with same CATH topology
 1C24 A;  2V3Y A;  5CNX A;  2DFI A;  4R60 A;  1B59 A;  4PNC A;  2GU7 A;  2OAZ A;  1B6A A;  4U1B A;  4U76 A;  1C27 A;  4QR8 A;  1WL6 A;  5E5B A;  2IW2 A;  1WLR A;  4U71 A;  3PKD A;  2BWT A;  5CDV A;  4KM3 A;  3ROR A;  1KP0 A;  3BIP A;  4S2R P;  4U75 A;  3CB6 A;  2GU6 A;  2GG5 A;  3Q6D A;  5CDL A;  5CIK A;  2Q8K A;  4IU6 A;  5CDE A;  2BWW A;  4IEC A;  4S01 A;  3FM3 A;  4FLK A;  5CLS A;  4IKU A;  1BOA A;  5JHU A;  1R58 A;  2GG2 A;  2GA2 A;  1C21 A;  2Q95 A;  4IDY A;  1W2M A;  5D6E A;  1XNZ A;  4PV4 A;  1BN5 A;  1JAW A;  2B3L A;  1PV9 A;  2EVC A;  3MR1 A;  4B28 A;  4OOK A;  2GZ5 A;  2P98 A;  4FUK A;  4U69 A;  3PKB A;  4U70 A;  4U6W A;  2BHB A;  4IKR A;  1XGM A;  1XGS A;  2Q92 A;  1QXY A;  3IU8 A;  2BB7 A;  4IF7 A;  2BHC A;  2EVO A;  1R5G A;  2BH3 A;  2HOW A;  4ZWU A;  4U6Z A;  2OKN A;  4FO7 A;  4U6C A;  1YW7 A;  4RZY A;  4A6W A;  1WY2 A;  2BWY A;  4Z7M A;  2Q93 A;  5D6F A;  2B3H A;  1QXZ A;  2V6C A;  4IKT A;  2GTX A;  4ZNG A;  4ZWP A;  2GG0 A;  2MAT A;  2G6P A;  3FMR A;  3D27 A;  1WKM A;  3TB5 A;  1WL9 A;  1A16 A;  1YW8 A;  2B3K A;  2BWU A;  2EA4 A;  2ZSG A;  1YVM A;  3IU9 A;  4U6E A;  2GG3 A;  4JUQ A;  2NQ7 A;  4FLI A;  2BN7 A;  2GU5 A;  3RVA A;  1C23 A;  1KQ0 A;  3IU7 A;  1MAT A;  2GG8 A;  3TAV A;  4HXX A;  1WBQ A;  2Q96 A;  3PKE A;  4RGZ 1;  5JFR A;  2V3Z A;  2EVM A;  5FCF A;  2V3X A;  3MAT A;  5JI6 A;  2BWX A;  5CE6 A;  4FKC A;  2GG9 A;  2EA2 A;  1QZY A;  3CTZ A;  1KQ9 A;  2BHA A;  2GGB A;  4S2T P;  4A6V A;  1C22 A;  1XGN A;  4MAT A;  4S00 A;  1N51 A;  2GU4 A;  2NQ6 A;  1XGO A;  1YW9 A;  1O0X A;  4RZZ A;  2GGC A;  3IG4 A;  2P99 A;  3CB5 A;  3FMQ A;  4U6J A;  4IPA A;  5FCH A;  4ZWO A;  4U73 A;  2ADU A;  4IKS A;  3L24 A;  4FO8 A;  2P9A A;  2BWS A;  2GG7 A;  1W7V A;  4FLL A;  1QXW A;  3PKC A;  3BIQ A;  4EGE A;  2Q94 A;  4FLJ A;  3S6B A;  3L7G A;  1WN1 A;  1CHM A;  3PKA A;  3MX6 A;  1YJ3 A;  2BWV A;  2BHD A;  1R5H A;  3BIT A;  1M35 A;  1Y1N A; 
#chains in the Genus database with same CATH homology
 1C24 A;  2V3Y A;  5CNX A;  2DFI A;  4R60 A;  1B59 A;  4PNC A;  2GU7 A;  2OAZ A;  1B6A A;  4U1B A;  4U76 A;  1C27 A;  4QR8 A;  1WL6 A;  5E5B A;  2IW2 A;  1WLR A;  4U71 A;  3PKD A;  2BWT A;  5CDV A;  4KM3 A;  3ROR A;  1KP0 A;  3BIP A;  4S2R P;  4U75 A;  3CB6 A;  2GU6 A;  2GG5 A;  3Q6D A;  5CDL A;  5CIK A;  2Q8K A;  4IU6 A;  5CDE A;  2BWW A;  4IEC A;  4S01 A;  3FM3 A;  4FLK A;  5CLS A;  4IKU A;  1BOA A;  5JHU A;  1R58 A;  2GG2 A;  2GA2 A;  1C21 A;  2Q95 A;  4IDY A;  1W2M A;  5D6E A;  1XNZ A;  4PV4 A;  1BN5 A;  1JAW A;  2B3L A;  1PV9 A;  2EVC A;  3MR1 A;  4B28 A;  4OOK A;  2GZ5 A;  2P98 A;  4FUK A;  4U69 A;  3PKB A;  4U70 A;  4U6W A;  2BHB A;  4IKR A;  1XGM A;  1XGS A;  2Q92 A;  1QXY A;  3IU8 A;  2BB7 A;  4IF7 A;  2BHC A;  2EVO A;  1R5G A;  2BH3 A;  2HOW A;  4ZWU A;  4U6Z A;  2OKN A;  4FO7 A;  4U6C A;  1YW7 A;  4RZY A;  4A6W A;  1WY2 A;  2BWY A;  4Z7M A;  2Q93 A;  5D6F A;  2B3H A;  1QXZ A;  2V6C A;  4IKT A;  2GTX A;  4ZNG A;  4ZWP A;  2GG0 A;  2MAT A;  2G6P A;  3FMR A;  3D27 A;  1WKM A;  3TB5 A;  1WL9 A;  1A16 A;  1YW8 A;  2B3K A;  2BWU A;  2EA4 A;  2ZSG A;  1YVM A;  3IU9 A;  4U6E A;  2GG3 A;  4JUQ A;  2NQ7 A;  4FLI A;  2BN7 A;  2GU5 A;  3RVA A;  1C23 A;  1KQ0 A;  3IU7 A;  1MAT A;  2GG8 A;  3TAV A;  4HXX A;  1WBQ A;  2Q96 A;  3PKE A;  4RGZ 1;  5JFR A;  2V3Z A;  2EVM A;  5FCF A;  2V3X A;  3MAT A;  5JI6 A;  2BWX A;  5CE6 A;  4FKC A;  2GG9 A;  2EA2 A;  1QZY A;  3CTZ A;  1KQ9 A;  2BHA A;  2GGB A;  4S2T P;  4A6V A;  1C22 A;  1XGN A;  4MAT A;  4S00 A;  1N51 A;  2GU4 A;  2NQ6 A;  1XGO A;  1YW9 A;  1O0X A;  4RZZ A;  2GGC A;  3IG4 A;  2P99 A;  3CB5 A;  3FMQ A;  4U6J A;  4IPA A;  5FCH A;  4ZWO A;  4U73 A;  2ADU A;  4IKS A;  3L24 A;  4FO8 A;  2P9A A;  2BWS A;  2GG7 A;  1W7V A;  4FLL A;  1QXW A;  3PKC A;  3BIQ A;  4EGE A;  2Q94 A;  4FLJ A;  3S6B A;  3L7G A;  1WN1 A;  1CHM A;  3PKA A;  3MX6 A;  1YJ3 A;  2BWV A;  2BHD A;  1R5H A;  3BIT A;  1M35 A;  1Y1N A; 
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