3RORA

Crystal structure of c105s mutant of mycobacterium tuberculosis methionine aminopeptidase
Total Genus 85

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
85
sequence length
282
structure length
282
Chain Sequence
RTALSPGVLSPTRPVPNWIARPEYVGKPAAQEGSEPWVQTPEVIEKMRVAGRIAAGALAEAGKAVAPGVTTDELDRIAHEYLVDNGAYPSTLGYKGFPKSCSTSLNEVICHGIPDSTVITDGDIVNIDVTAYIGGVHGDTNATFPAGDVADEHRLLVDRTREATMRAINTVKPGRALSVIGRVIESYANRFGYNVVRDFTGHGIGTTFHNGLVVLHYDQPAVETIMQPGMTFTIEPMINLGALDYEIWDDGWTVVTKDRKWTAQFEHTLLVTDTGVEILTCL

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYS3 (104-108)TII3 (96-99)TI1 (19-22)TI2 (25-28)TI3 (92-95)TIV1 (35-38)TIV6 (207-210)S12 (228-229)TVIII1 (39-42)TII6 (230-233)AH1 (44-67)TI6 (275-278)TIV2 (69-72)S1 (72-73)TIV3 (135-138)S2 (91-92)S4 (111-113)S6 (126-136)TIV8 (253-256)TII4 (123-126)S5 (121-122)S7 (139-149)S10 (204-206)TIV4 (149-152)AH3 (154-173)AH4 (180-194)TII5 (175-178)S8 (178-179)TIV7 (222-225)S14 (240-242)S9 (197-198)TIV5 (199-202)S13 (233-237)TVIII2 (200-203)TVIII4 (210-213)S11 (216-217)S18 (270-274)TI5 (259-262)S16 (257-259)S17 (265-267)S19 (279-281)AH2 (74-87)TI'1 (97-100)TII2 (94-97)TI4 (251-254)TII'1 (108-111)S15 (248-250)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Mycobacterium tuberculosis
publication title Crystal structure of C105S mutant of Mycobacterium tuberculosis methionine aminopeptidase
rcsb
molecule keywords Methionine aminopeptidase
total genus 85
structure length 282
sequence length 282
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2011-04-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rorA01
3TB5A 3MX6A 3CB6A 4ZNGA 2G6PA 2BH3A 2GG5A 4RZZA 1A16A 2BHAA 1R58A 5CLSA 5FCHA 1WL6A 1WL9A 1CHMA 1KQ0A 1XGMA 1QXYA 3PKEA 5CDVA 4IKUA 2Q96A 2GG9A 4U6WA 3CB5A 2GGBA 4S01A 2Q92A 3PKDA 1WKMA 4IKRA 1XGOA 3IU8A 1B59A 5JI6A 4U6EA 1KQ9A 4IDYA 1C24A 2BWWA 1Y1NA 5CE6A 2GGCA 4HXXA 4IKSA 2BWXA 2EVOA 2BN7A 4RGZ1 1WBQA 3Q6DA 2BHCA 2BWSA 2EVCA 4KM3A 4U76A 3L24A 5CDEA 2GG7A 2GTXA 4FO7A 4IU6A 4U69A 2OKNA 3MATA 2Q8KA 2IW2A 1KP0A 1O0XA 2EVMA 4S2RP 2GZ5A 3BIQA 2GA2A 4MATA 4U6CA 5E5BA 2BWUA 3PKAA 4FLKA 2BHBA 1QZYA 3FMRA 1BOAA 3PKBA 3S6BA 4PV4A 1MATA 2BWVA 2GU4A 5JFRA 4Z7MA 1XNZA 3PKCA 4IPAA 2NQ6A 3RORA 2GU5A 2OAZA 3BIPA 1B6AA 2BHDA 3TAVA 4FLJA 3IU7A 4RZYA 5JHUA 4U75A 2BWYA 1WLRA 5D6EA 4A6VA 2P9AA 1C23A 4ZWOA 2V6CA 1C21A 2Q94A 3CTZA 4FLIA 5FCFA 1YJ3A 2B3HA 1XGSA 1QXWA 5D6FA 2V3ZA 3FM3A 1YW8A 4B28A 2GG2A 3IG4A 4FLLA 1WY2A 1C22A 2Q93A 2DFIA 2HOWA 5CDLA 4R60A 2B3KA 1BN5A 1M35A 4U1BA 4QR8A 5CIKA 3FMQA 3MR1A 4FUKA 4S00A 4ZWUA 4U71A 2P98A 1N51A 1W7VA 1W2MA 3IU9A 3D27A 1R5HA 1YW9A 1QXZA 2V3XA 2B3LA 2EA2A 2GU6A 4U70A 4IECA 4EGEA 2GG3A 3L7GA 4U6JA 2V3YA 2GG8A 4U73A 1YVMA 2BB7A 2EA4A 2GG0A 3BITA 1PV9A 1XGNA 1WN1A 2BWTA 4S2TP 1R5GA 2NQ7A 4OOKA 4A6WA 4IKTA 4PNCA 2ZSGA 3RVAA 4FKCA 2P99A 1C27A 2MATA 4ZWPA 4JUQA 1JAWA 4U6ZA 2GU7A 2Q95A 1YW7A 5CNXA 4IF7A 4FO8A 2ADUA
chains in the Genus database with same CATH superfamily
3TB5A 3MX6A 3CB6A 4ZNGA 2G6PA 2BH3A 2GG5A 4RZZA 1A16A 2BHAA 1R58A 5CLSA 5FCHA 1WL6A 1WL9A 1CHMA 1KQ0A 1XGMA 1QXYA 3PKEA 5CDVA 4IKUA 2Q96A 2GG9A 4U6WA 3CB5A 2GGBA 4S01A 2Q92A 3PKDA 1WKMA 4IKRA 1XGOA 3IU8A 1B59A 5JI6A 4U6EA 1KQ9A 4IDYA 1C24A 2BWWA 1Y1NA 5CE6A 2GGCA 4HXXA 4IKSA 2BWXA 2EVOA 2BN7A 4RGZ1 1WBQA 3Q6DA 2BHCA 2BWSA 2EVCA 4KM3A 4U76A 3L24A 5CDEA 2GG7A 2GTXA 4FO7A 4IU6A 4U69A 2OKNA 3MATA 2Q8KA 2IW2A 1KP0A 1O0XA 2EVMA 4S2RP 2GZ5A 3BIQA 2GA2A 4MATA 4U6CA 5E5BA 2BWUA 3PKAA 4FLKA 2BHBA 1QZYA 3FMRA 1BOAA 3PKBA 3S6BA 4PV4A 1MATA 2BWVA 2GU4A 5JFRA 4Z7MA 1XNZA 3PKCA 4IPAA 2NQ6A 3RORA 2GU5A 2OAZA 3BIPA 1B6AA 2BHDA 3TAVA 4FLJA 3IU7A 4RZYA 5JHUA 4U75A 2BWYA 1WLRA 5D6EA 4A6VA 2P9AA 1C23A 4ZWOA 2V6CA 1C21A 2Q94A 3CTZA 4FLIA 5FCFA 1YJ3A 2B3HA 1XGSA 1QXWA 5D6FA 2V3ZA 3FM3A 1YW8A 4B28A 2GG2A 3IG4A 4FLLA 1WY2A 1C22A 2Q93A 2DFIA 2HOWA 5CDLA 4R60A 2B3KA 1BN5A 1M35A 4U1BA 4QR8A 5CIKA 3FMQA 3MR1A 4FUKA 4S00A 4ZWUA 4U71A 2P98A 1N51A 1W7VA 1W2MA 3IU9A 3D27A 1R5HA 1YW9A 1QXZA 2V3XA 2B3LA 2EA2A 2GU6A 4U70A 4IECA 4EGEA 2GG3A 3L7GA 4U6JA 2V3YA 2GG8A 4U73A 1YVMA 2BB7A 2EA4A 2GG0A 3BITA 1PV9A 1XGNA 1WN1A 2BWTA 4S2TP 1R5GA 2NQ7A 4OOKA 4A6WA 4IKTA 4PNCA 2ZSGA 3RVAA 4FKCA 2P99A 1C27A 2MATA 4ZWPA 4JUQA 1JAWA 4U6ZA 2GU7A 2Q95A 1YW7A 5CNXA 4IF7A 4FO8A 2ADUA
chains in the Genus database with same CATH topology
3TB5A 3MX6A 3CB6A 4ZNGA 2G6PA 2BH3A 2GG5A 4RZZA 1A16A 2BHAA 1R58A 5CLSA 5FCHA 1WL6A 1WL9A 1CHMA 1KQ0A 1XGMA 1QXYA 3PKEA 5CDVA 4IKUA 2Q96A 2GG9A 4U6WA 3CB5A 2GGBA 4S01A 2Q92A 3PKDA 1WKMA 4IKRA 1XGOA 3IU8A 1B59A 5JI6A 4U6EA 1KQ9A 4IDYA 1C24A 2BWWA 1Y1NA 5CE6A 2GGCA 4HXXA 4IKSA 2BWXA 2EVOA 2BN7A 4RGZ1 1WBQA 3Q6DA 2BHCA 2BWSA 2EVCA 4KM3A 4U76A 3L24A 5CDEA 2GG7A 2GTXA 4FO7A 4IU6A 4U69A 2OKNA 3MATA 2Q8KA 2IW2A 1KP0A 1O0XA 2EVMA 4S2RP 2GZ5A 3BIQA 2GA2A 4MATA 4U6CA 5E5BA 2BWUA 3PKAA 4FLKA 2BHBA 1QZYA 3FMRA 1BOAA 3PKBA 3S6BA 4PV4A 1MATA 2BWVA 2GU4A 5JFRA 4Z7MA 1XNZA 3PKCA 4IPAA 2NQ6A 3RORA 2GU5A 2OAZA 3BIPA 1B6AA 2BHDA 3TAVA 4FLJA 3IU7A 4RZYA 5JHUA 4U75A 2BWYA 1WLRA 5D6EA 4A6VA 2P9AA 1C23A 4ZWOA 2V6CA 1C21A 2Q94A 3CTZA 4FLIA 5FCFA 1YJ3A 2B3HA 1XGSA 1QXWA 5D6FA 2V3ZA 3FM3A 1YW8A 4B28A 2GG2A 3IG4A 4FLLA 1WY2A 1C22A 2Q93A 2DFIA 2HOWA 5CDLA 4R60A 2B3KA 1BN5A 1M35A 4U1BA 4QR8A 5CIKA 3FMQA 3MR1A 4FUKA 4S00A 4ZWUA 4U71A 2P98A 1N51A 1W7VA 1W2MA 3IU9A 3D27A 1R5HA 1YW9A 1QXZA 2V3XA 2B3LA 2EA2A 2GU6A 4U70A 4IECA 4EGEA 2GG3A 3L7GA 4U6JA 2V3YA 2GG8A 4U73A 1YVMA 2BB7A 2EA4A 2GG0A 3BITA 1PV9A 1XGNA 1WN1A 2BWTA 4S2TP 1R5GA 2NQ7A 4OOKA 4A6WA 4IKTA 4PNCA 2ZSGA 3RVAA 4FKCA 2P99A 1C27A 2MATA 4ZWPA 4JUQA 1JAWA 4U6ZA 2GU7A 2Q95A 1YW7A 5CNXA 4IF7A 4FO8A 2ADUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TB5 A;  3MX6 A;  3CB6 A;  4ZNG A;  2G6P A;  2BH3 A;  2GG5 A;  4RZZ A;  1A16 A;  2BHA A;  1R58 A;  5CLS A;  5FCH A;  1WL6 A;  1WL9 A;  1CHM A;  1KQ0 A;  1XGM A;  1QXY A;  3PKE A;  5CDV A;  4IKU A;  2Q96 A;  2GG9 A;  4U6W A;  3CB5 A;  2GGB A;  4S01 A;  2Q92 A;  3PKD A;  1WKM A;  4IKR A;  1XGO A;  3IU8 A;  1B59 A;  5JI6 A;  4U6E A;  1KQ9 A;  4IDY A;  1C24 A;  2BWW A;  1Y1N A;  5CE6 A;  2GGC A;  4HXX A;  4IKS A;  2BWX A;  2EVO A;  2BN7 A;  4RGZ 1;  1WBQ A;  3Q6D A;  2BHC A;  2BWS A;  2EVC A;  4KM3 A;  4U76 A;  3L24 A;  5CDE A;  2GG7 A;  2GTX A;  4FO7 A;  4IU6 A;  4U69 A;  2OKN A;  3MAT A;  2Q8K A;  2IW2 A;  1KP0 A;  1O0X A;  2EVM A;  4S2R P;  2GZ5 A;  3BIQ A;  2GA2 A;  4MAT A;  4U6C A;  5E5B A;  2BWU A;  3PKA A;  4FLK A;  2BHB A;  1QZY A;  3FMR A;  1BOA A;  3PKB A;  3S6B A;  4PV4 A;  1MAT A;  2BWV A;  2GU4 A;  5JFR A;  4Z7M A;  1XNZ A;  3PKC A;  4IPA A;  2NQ6 A;  3ROR A;  2GU5 A;  2OAZ A;  3BIP A;  1B6A A;  2BHD A;  3TAV A;  4FLJ A;  3IU7 A;  4RZY A;  5JHU A;  4U75 A;  2BWY A;  1WLR A;  5D6E A;  4A6V A;  2P9A A;  1C23 A;  4ZWO A;  2V6C A;  1C21 A;  2Q94 A;  3CTZ A;  4FLI A;  5FCF A;  1YJ3 A;  2B3H A;  1XGS A;  1QXW A;  5D6F A;  2V3Z A;  3FM3 A;  1YW8 A;  4B28 A;  2GG2 A;  3IG4 A;  4FLL A;  1WY2 A;  1C22 A;  2Q93 A;  2DFI A;  2HOW A;  5CDL A;  4R60 A;  2B3K A;  1BN5 A;  1M35 A;  4U1B A;  4QR8 A;  5CIK A;  3FMQ A;  3MR1 A;  4FUK A;  4S00 A;  4ZWU A;  4U71 A;  2P98 A;  1N51 A;  1W7V A;  1W2M A;  3IU9 A;  3D27 A;  1R5H A;  1YW9 A;  1QXZ A;  2V3X A;  2B3L A;  2EA2 A;  2GU6 A;  4U70 A;  4IEC A;  4EGE A;  2GG3 A;  3L7G A;  4U6J A;  2V3Y A;  2GG8 A;  4U73 A;  1YVM A;  2BB7 A;  2EA4 A;  2GG0 A;  3BIT A;  1PV9 A;  1XGN A;  1WN1 A;  2BWT A;  4S2T P;  1R5G A;  2NQ7 A;  4OOK A;  4A6W A;  4IKT A;  4PNC A;  2ZSG A;  3RVA A;  4FKC A;  2P99 A;  1C27 A;  2MAT A;  4ZWP A;  4JUQ A;  1JAW A;  4U6Z A;  2GU7 A;  2Q95 A;  1YW7 A;  5CNX A;  4IF7 A;  4FO8 A;  2ADU A; 
#chains in the Genus database with same CATH topology
 3TB5 A;  3MX6 A;  3CB6 A;  4ZNG A;  2G6P A;  2BH3 A;  2GG5 A;  4RZZ A;  1A16 A;  2BHA A;  1R58 A;  5CLS A;  5FCH A;  1WL6 A;  1WL9 A;  1CHM A;  1KQ0 A;  1XGM A;  1QXY A;  3PKE A;  5CDV A;  4IKU A;  2Q96 A;  2GG9 A;  4U6W A;  3CB5 A;  2GGB A;  4S01 A;  2Q92 A;  3PKD A;  1WKM A;  4IKR A;  1XGO A;  3IU8 A;  1B59 A;  5JI6 A;  4U6E A;  1KQ9 A;  4IDY A;  1C24 A;  2BWW A;  1Y1N A;  5CE6 A;  2GGC A;  4HXX A;  4IKS A;  2BWX A;  2EVO A;  2BN7 A;  4RGZ 1;  1WBQ A;  3Q6D A;  2BHC A;  2BWS A;  2EVC A;  4KM3 A;  4U76 A;  3L24 A;  5CDE A;  2GG7 A;  2GTX A;  4FO7 A;  4IU6 A;  4U69 A;  2OKN A;  3MAT A;  2Q8K A;  2IW2 A;  1KP0 A;  1O0X A;  2EVM A;  4S2R P;  2GZ5 A;  3BIQ A;  2GA2 A;  4MAT A;  4U6C A;  5E5B A;  2BWU A;  3PKA A;  4FLK A;  2BHB A;  1QZY A;  3FMR A;  1BOA A;  3PKB A;  3S6B A;  4PV4 A;  1MAT A;  2BWV A;  2GU4 A;  5JFR A;  4Z7M A;  1XNZ A;  3PKC A;  4IPA A;  2NQ6 A;  3ROR A;  2GU5 A;  2OAZ A;  3BIP A;  1B6A A;  2BHD A;  3TAV A;  4FLJ A;  3IU7 A;  4RZY A;  5JHU A;  4U75 A;  2BWY A;  1WLR A;  5D6E A;  4A6V A;  2P9A A;  1C23 A;  4ZWO A;  2V6C A;  1C21 A;  2Q94 A;  3CTZ A;  4FLI A;  5FCF A;  1YJ3 A;  2B3H A;  1XGS A;  1QXW A;  5D6F A;  2V3Z A;  3FM3 A;  1YW8 A;  4B28 A;  2GG2 A;  3IG4 A;  4FLL A;  1WY2 A;  1C22 A;  2Q93 A;  2DFI A;  2HOW A;  5CDL A;  4R60 A;  2B3K A;  1BN5 A;  1M35 A;  4U1B A;  4QR8 A;  5CIK A;  3FMQ A;  3MR1 A;  4FUK A;  4S00 A;  4ZWU A;  4U71 A;  2P98 A;  1N51 A;  1W7V A;  1W2M A;  3IU9 A;  3D27 A;  1R5H A;  1YW9 A;  1QXZ A;  2V3X A;  2B3L A;  2EA2 A;  2GU6 A;  4U70 A;  4IEC A;  4EGE A;  2GG3 A;  3L7G A;  4U6J A;  2V3Y A;  2GG8 A;  4U73 A;  1YVM A;  2BB7 A;  2EA4 A;  2GG0 A;  3BIT A;  1PV9 A;  1XGN A;  1WN1 A;  2BWT A;  4S2T P;  1R5G A;  2NQ7 A;  4OOK A;  4A6W A;  4IKT A;  4PNC A;  2ZSG A;  3RVA A;  4FKC A;  2P99 A;  1C27 A;  2MAT A;  4ZWP A;  4JUQ A;  1JAW A;  4U6Z A;  2GU7 A;  2Q95 A;  1YW7 A;  5CNX A;  4IF7 A;  4FO8 A;  2ADU A; 
#chains in the Genus database with same CATH homology
 3TB5 A;  3MX6 A;  3CB6 A;  4ZNG A;  2G6P A;  2BH3 A;  2GG5 A;  4RZZ A;  1A16 A;  2BHA A;  1R58 A;  5CLS A;  5FCH A;  1WL6 A;  1WL9 A;  1CHM A;  1KQ0 A;  1XGM A;  1QXY A;  3PKE A;  5CDV A;  4IKU A;  2Q96 A;  2GG9 A;  4U6W A;  3CB5 A;  2GGB A;  4S01 A;  2Q92 A;  3PKD A;  1WKM A;  4IKR A;  1XGO A;  3IU8 A;  1B59 A;  5JI6 A;  4U6E A;  1KQ9 A;  4IDY A;  1C24 A;  2BWW A;  1Y1N A;  5CE6 A;  2GGC A;  4HXX A;  4IKS A;  2BWX A;  2EVO A;  2BN7 A;  4RGZ 1;  1WBQ A;  3Q6D A;  2BHC A;  2BWS A;  2EVC A;  4KM3 A;  4U76 A;  3L24 A;  5CDE A;  2GG7 A;  2GTX A;  4FO7 A;  4IU6 A;  4U69 A;  2OKN A;  3MAT A;  2Q8K A;  2IW2 A;  1KP0 A;  1O0X A;  2EVM A;  4S2R P;  2GZ5 A;  3BIQ A;  2GA2 A;  4MAT A;  4U6C A;  5E5B A;  2BWU A;  3PKA A;  4FLK A;  2BHB A;  1QZY A;  3FMR A;  1BOA A;  3PKB A;  3S6B A;  4PV4 A;  1MAT A;  2BWV A;  2GU4 A;  5JFR A;  4Z7M A;  1XNZ A;  3PKC A;  4IPA A;  2NQ6 A;  3ROR A;  2GU5 A;  2OAZ A;  3BIP A;  1B6A A;  2BHD A;  3TAV A;  4FLJ A;  3IU7 A;  4RZY A;  5JHU A;  4U75 A;  2BWY A;  1WLR A;  5D6E A;  4A6V A;  2P9A A;  1C23 A;  4ZWO A;  2V6C A;  1C21 A;  2Q94 A;  3CTZ A;  4FLI A;  5FCF A;  1YJ3 A;  2B3H A;  1XGS A;  1QXW A;  5D6F A;  2V3Z A;  3FM3 A;  1YW8 A;  4B28 A;  2GG2 A;  3IG4 A;  4FLL A;  1WY2 A;  1C22 A;  2Q93 A;  2DFI A;  2HOW A;  5CDL A;  4R60 A;  2B3K A;  1BN5 A;  1M35 A;  4U1B A;  4QR8 A;  5CIK A;  3FMQ A;  3MR1 A;  4FUK A;  4S00 A;  4ZWU A;  4U71 A;  2P98 A;  1N51 A;  1W7V A;  1W2M A;  3IU9 A;  3D27 A;  1R5H A;  1YW9 A;  1QXZ A;  2V3X A;  2B3L A;  2EA2 A;  2GU6 A;  4U70 A;  4IEC A;  4EGE A;  2GG3 A;  3L7G A;  4U6J A;  2V3Y A;  2GG8 A;  4U73 A;  1YVM A;  2BB7 A;  2EA4 A;  2GG0 A;  3BIT A;  1PV9 A;  1XGN A;  1WN1 A;  2BWT A;  4S2T P;  1R5G A;  2NQ7 A;  4OOK A;  4A6W A;  4IKT A;  4PNC A;  2ZSG A;  3RVA A;  4FKC A;  2P99 A;  1C27 A;  2MAT A;  4ZWP A;  4JUQ A;  1JAW A;  4U6Z A;  2GU7 A;  2Q95 A;  1YW7 A;  5CNX A;  4IF7 A;  4FO8 A;  2ADU A; 
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