4U76A

Hsmetap (f309m) holo form
Total Genus 102

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
102
sequence length
304
structure length
304
Chain Sequence
YRYTGKLRPHYPLMPTRPVPSYIQRPDYADHPLGMSESEQALKGTSQIKLLSSEDIEGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACIARNCYPSPLNYYNFPKSCCTSVNEVICHGIPDRRPLQEGDIVNVDITLYRNGYHGDLNETFFVGEVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLMHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTRRLDSARPHFMS
5010015020025030030025020015010050
020406080100Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTIV1 (116-119)TI2 (115-118)TI3 (117-120)TII5 (273-276)AH4 (252-271)AH1 (126-131)TII1 (131-134)S8 (276-277)AH2 (142-164)TII2 (167-170)S1 (170-171)S3 (203-206)3H1 (195-197)AH3 (172-186)S7 (237-247)TI5 (190-193)S2 (189-190)TIV2 (233-236)TII3 (192-195)S6 (224-234)TII'1 (206-209)S4 (209-211)S5 (219-220)S9 (295-296)TIV3 (297-300)S10 (302-304)TI4 (120-123)AH5 (278-291)TII4 (221-224)TI1 (109-112)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Homo sapiens
publication title Identification of the Molecular Basis of Inhibitor Selectivity between the Human and Streptococcal Type I Methionine Aminopeptidases
pubmed doi rcsb
molecule keywords Methionine aminopeptidase 1
total genus 102
structure length 304
sequence length 304
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2014-07-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4u76A00
2GGBA 4EGEA 4FO8A 2GTXA 1YJ3A 1QXZA 2P99A 4U6CA 3TB5A 2P98A 2GA2A 4PV4A 4U6EA 2OAZA 4IU6A 4JUQA 2GG3A 1O0XA 2BWTA 2GG8A 3S6BA 4ZWUA 1B59A 1XGNA 4U6ZA 2NQ7A 2BHDA 2EA4A 4FO7A 4IKTA 2BWVA 3L24A 2Q96A 1PV9A 4FLJA 4U1BA 1B6AA 4ZWPA 4IF7A 3PKEA 5JFRA 2GU4A 2BHBA 1C21A 4FLKA 1JAWA 4KM3A 3MATA 2B3LA 2BWWA 2BB7A 3RORA 1C22A 3BIPA 5JI6A 3FM3A 3IU9A 4IKSA 3BITA 1QXWA 2G6PA 1C27A 2Q93A 4S2RP 2GG2A 1MATA 2EVOA 4S00A 1XGOA 5JHUA 2GU7A 1M35A 2HOWA 4U71A 2ADUA 5FCHA 4IECA 2GG7A 3PKDA 5CIKA 1WN1A 1YVMA 2BH3A 2BWSA 4ZNGA 2Q95A 2P9AA 1W7VA 4FLLA 2V3YA 4B28A 3CB5A 3IU8A 1Y1NA 5CDEA 2GU5A 5E5BA 4Z7MA 4U6JA 2Q94A 4U69A 2BWUA 3IU7A 3MR1A 4FKCA 3Q6DA 2BWYA 5CNXA 4R60A 2GU6A 4RZZA 4ZWOA 1CHMA 1WLRA 1YW9A 5FCFA 1KQ9A 4U6WA 2BHCA 1C23A 4S2TP 2Q92A 4QR8A 4FLIA 2GG9A 2GG5A 1XGSA 4IPAA 5D6FA 4MATA 3PKCA 1N51A 1A16A 2B3HA 2BHAA 2EVCA 5CDVA 2NQ6A 2V6CA 3CTZA 3L7GA 2EVMA 5CLSA 3IG4A 4RZYA 4IDYA 3TAVA 2V3XA 3RVAA 3FMRA 3MX6A 3PKAA 1WY2A 2BWXA 1R5HA 1YW8A 2B3KA 5CE6A 2IW2A 2EA2A 4S01A 2BN7A 1WBQA 4RGZ1 2OKNA 1KP0A 4U75A 4FUKA 1BOAA 1KQ0A 4IKRA 2MATA 2V3ZA 2Q8KA 2DFIA 2GZ5A 4PNCA 1W2MA 1R5GA 4U70A 3D27A 1QXYA 4HXXA 4OOKA 3BIQA 3FMQA 1WKMA 1BN5A 4U73A 1WL6A 1YW7A 4U76A 4A6WA 1XNZA 1C24A 1R58A 2ZSGA 4A6VA 1QZYA 1WL9A 1XGMA 2GG0A 2GGCA 4IKUA 3CB6A 5D6EA 5CDLA 3PKBA
chains in the Genus database with same CATH superfamily
2GGBA 4EGEA 4FO8A 2GTXA 1YJ3A 1QXZA 2P99A 4U6CA 3TB5A 2P98A 2GA2A 4PV4A 4U6EA 2OAZA 4IU6A 4JUQA 2GG3A 1O0XA 2BWTA 2GG8A 3S6BA 4ZWUA 1B59A 1XGNA 4U6ZA 2NQ7A 2BHDA 2EA4A 4FO7A 4IKTA 2BWVA 3L24A 2Q96A 1PV9A 4FLJA 4U1BA 1B6AA 4ZWPA 4IF7A 3PKEA 5JFRA 2GU4A 2BHBA 1C21A 4FLKA 1JAWA 4KM3A 3MATA 2B3LA 2BWWA 2BB7A 3RORA 1C22A 3BIPA 5JI6A 3FM3A 3IU9A 4IKSA 3BITA 1QXWA 2G6PA 1C27A 2Q93A 4S2RP 2GG2A 1MATA 2EVOA 4S00A 1XGOA 5JHUA 2GU7A 1M35A 2HOWA 4U71A 2ADUA 5FCHA 4IECA 2GG7A 3PKDA 5CIKA 1WN1A 1YVMA 2BH3A 2BWSA 4ZNGA 2Q95A 2P9AA 1W7VA 4FLLA 2V3YA 4B28A 3CB5A 3IU8A 1Y1NA 5CDEA 2GU5A 5E5BA 4Z7MA 4U6JA 2Q94A 4U69A 2BWUA 3IU7A 3MR1A 4FKCA 3Q6DA 2BWYA 5CNXA 4R60A 2GU6A 4RZZA 4ZWOA 1CHMA 1WLRA 1YW9A 5FCFA 1KQ9A 4U6WA 2BHCA 1C23A 4S2TP 2Q92A 4QR8A 4FLIA 2GG9A 2GG5A 1XGSA 4IPAA 5D6FA 4MATA 3PKCA 1N51A 1A16A 2B3HA 2BHAA 2EVCA 5CDVA 2NQ6A 2V6CA 3CTZA 3L7GA 2EVMA 5CLSA 3IG4A 4RZYA 4IDYA 3TAVA 2V3XA 3RVAA 3FMRA 3MX6A 3PKAA 1WY2A 2BWXA 1R5HA 1YW8A 2B3KA 5CE6A 2IW2A 2EA2A 4S01A 2BN7A 1WBQA 4RGZ1 2OKNA 1KP0A 4U75A 4FUKA 1BOAA 1KQ0A 4IKRA 2MATA 2V3ZA 2Q8KA 2DFIA 2GZ5A 4PNCA 1W2MA 1R5GA 4U70A 3D27A 1QXYA 4HXXA 4OOKA 3BIQA 3FMQA 1WKMA 1BN5A 4U73A 1WL6A 1YW7A 4U76A 4A6WA 1XNZA 1C24A 1R58A 2ZSGA 4A6VA 1QZYA 1WL9A 1XGMA 2GG0A 2GGCA 4IKUA 3CB6A 5D6EA 5CDLA 3PKBA
chains in the Genus database with same CATH topology
2GGBA 4EGEA 4FO8A 2GTXA 1YJ3A 1QXZA 2P99A 4U6CA 3TB5A 2P98A 2GA2A 4PV4A 4U6EA 2OAZA 4IU6A 4JUQA 2GG3A 1O0XA 2BWTA 2GG8A 3S6BA 4ZWUA 1B59A 1XGNA 4U6ZA 2NQ7A 2BHDA 2EA4A 4FO7A 4IKTA 2BWVA 3L24A 2Q96A 1PV9A 4FLJA 4U1BA 1B6AA 4ZWPA 4IF7A 3PKEA 5JFRA 2GU4A 2BHBA 1C21A 4FLKA 1JAWA 4KM3A 3MATA 2B3LA 2BWWA 2BB7A 3RORA 1C22A 3BIPA 5JI6A 3FM3A 3IU9A 4IKSA 3BITA 1QXWA 2G6PA 1C27A 2Q93A 4S2RP 2GG2A 1MATA 2EVOA 4S00A 1XGOA 5JHUA 2GU7A 1M35A 2HOWA 4U71A 2ADUA 5FCHA 4IECA 2GG7A 3PKDA 5CIKA 1WN1A 1YVMA 2BH3A 2BWSA 4ZNGA 2Q95A 2P9AA 1W7VA 4FLLA 2V3YA 4B28A 3CB5A 3IU8A 1Y1NA 5CDEA 2GU5A 5E5BA 4Z7MA 4U6JA 2Q94A 4U69A 2BWUA 3IU7A 3MR1A 4FKCA 3Q6DA 2BWYA 5CNXA 4R60A 2GU6A 4RZZA 4ZWOA 1CHMA 1WLRA 1YW9A 5FCFA 1KQ9A 4U6WA 2BHCA 1C23A 4S2TP 2Q92A 4QR8A 4FLIA 2GG9A 2GG5A 1XGSA 4IPAA 5D6FA 4MATA 3PKCA 1N51A 1A16A 2B3HA 2BHAA 2EVCA 5CDVA 2NQ6A 2V6CA 3CTZA 3L7GA 2EVMA 5CLSA 3IG4A 4RZYA 4IDYA 3TAVA 2V3XA 3RVAA 3FMRA 3MX6A 3PKAA 1WY2A 2BWXA 1R5HA 1YW8A 2B3KA 5CE6A 2IW2A 2EA2A 4S01A 2BN7A 1WBQA 4RGZ1 2OKNA 1KP0A 4U75A 4FUKA 1BOAA 1KQ0A 4IKRA 2MATA 2V3ZA 2Q8KA 2DFIA 2GZ5A 4PNCA 1W2MA 1R5GA 4U70A 3D27A 1QXYA 4HXXA 4OOKA 3BIQA 3FMQA 1WKMA 1BN5A 4U73A 1WL6A 1YW7A 4U76A 4A6WA 1XNZA 1C24A 1R58A 2ZSGA 4A6VA 1QZYA 1WL9A 1XGMA 2GG0A 2GGCA 4IKUA 3CB6A 5D6EA 5CDLA 3PKBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GGB A;  4EGE A;  4FO8 A;  2GTX A;  1YJ3 A;  1QXZ A;  2P99 A;  4U6C A;  3TB5 A;  2P98 A;  2GA2 A;  4PV4 A;  4U6E A;  2OAZ A;  4IU6 A;  4JUQ A;  2GG3 A;  1O0X A;  2BWT A;  2GG8 A;  3S6B A;  4ZWU A;  1B59 A;  1XGN A;  4U6Z A;  2NQ7 A;  2BHD A;  2EA4 A;  4FO7 A;  4IKT A;  2BWV A;  3L24 A;  2Q96 A;  1PV9 A;  4FLJ A;  4U1B A;  1B6A A;  4ZWP A;  4IF7 A;  3PKE A;  5JFR A;  2GU4 A;  2BHB A;  1C21 A;  4FLK A;  1JAW A;  4KM3 A;  3MAT A;  2B3L A;  2BWW A;  2BB7 A;  3ROR A;  1C22 A;  3BIP A;  5JI6 A;  3FM3 A;  3IU9 A;  4IKS A;  3BIT A;  1QXW A;  2G6P A;  1C27 A;  2Q93 A;  4S2R P;  2GG2 A;  1MAT A;  2EVO A;  4S00 A;  1XGO A;  5JHU A;  2GU7 A;  1M35 A;  2HOW A;  4U71 A;  2ADU A;  5FCH A;  4IEC A;  2GG7 A;  3PKD A;  5CIK A;  1WN1 A;  1YVM A;  2BH3 A;  2BWS A;  4ZNG A;  2Q95 A;  2P9A A;  1W7V A;  4FLL A;  2V3Y A;  4B28 A;  3CB5 A;  3IU8 A;  1Y1N A;  5CDE A;  2GU5 A;  5E5B A;  4Z7M A;  4U6J A;  2Q94 A;  4U69 A;  2BWU A;  3IU7 A;  3MR1 A;  4FKC A;  3Q6D A;  2BWY A;  5CNX A;  4R60 A;  2GU6 A;  4RZZ A;  4ZWO A;  1CHM A;  1WLR A;  1YW9 A;  5FCF A;  1KQ9 A;  4U6W A;  2BHC A;  1C23 A;  4S2T P;  2Q92 A;  4QR8 A;  4FLI A;  2GG9 A;  2GG5 A;  1XGS A;  4IPA A;  5D6F A;  4MAT A;  3PKC A;  1N51 A;  1A16 A;  2B3H A;  2BHA A;  2EVC A;  5CDV A;  2NQ6 A;  2V6C A;  3CTZ A;  3L7G A;  2EVM A;  5CLS A;  3IG4 A;  4RZY A;  4IDY A;  3TAV A;  2V3X A;  3RVA A;  3FMR A;  3MX6 A;  3PKA A;  1WY2 A;  2BWX A;  1R5H A;  1YW8 A;  2B3K A;  5CE6 A;  2IW2 A;  2EA2 A;  4S01 A;  2BN7 A;  1WBQ A;  4RGZ 1;  2OKN A;  1KP0 A;  4U75 A;  4FUK A;  1BOA A;  1KQ0 A;  4IKR A;  2MAT A;  2V3Z A;  2Q8K A;  2DFI A;  2GZ5 A;  4PNC A;  1W2M A;  1R5G A;  4U70 A;  3D27 A;  1QXY A;  4HXX A;  4OOK A;  3BIQ A;  3FMQ A;  1WKM A;  1BN5 A;  4U73 A;  1WL6 A;  1YW7 A;  4U76 A;  4A6W A;  1XNZ A;  1C24 A;  1R58 A;  2ZSG A;  4A6V A;  1QZY A;  1WL9 A;  1XGM A;  2GG0 A;  2GGC A;  4IKU A;  3CB6 A;  5D6E A;  5CDL A;  3PKB A; 
#chains in the Genus database with same CATH topology
 2GGB A;  4EGE A;  4FO8 A;  2GTX A;  1YJ3 A;  1QXZ A;  2P99 A;  4U6C A;  3TB5 A;  2P98 A;  2GA2 A;  4PV4 A;  4U6E A;  2OAZ A;  4IU6 A;  4JUQ A;  2GG3 A;  1O0X A;  2BWT A;  2GG8 A;  3S6B A;  4ZWU A;  1B59 A;  1XGN A;  4U6Z A;  2NQ7 A;  2BHD A;  2EA4 A;  4FO7 A;  4IKT A;  2BWV A;  3L24 A;  2Q96 A;  1PV9 A;  4FLJ A;  4U1B A;  1B6A A;  4ZWP A;  4IF7 A;  3PKE A;  5JFR A;  2GU4 A;  2BHB A;  1C21 A;  4FLK A;  1JAW A;  4KM3 A;  3MAT A;  2B3L A;  2BWW A;  2BB7 A;  3ROR A;  1C22 A;  3BIP A;  5JI6 A;  3FM3 A;  3IU9 A;  4IKS A;  3BIT A;  1QXW A;  2G6P A;  1C27 A;  2Q93 A;  4S2R P;  2GG2 A;  1MAT A;  2EVO A;  4S00 A;  1XGO A;  5JHU A;  2GU7 A;  1M35 A;  2HOW A;  4U71 A;  2ADU A;  5FCH A;  4IEC A;  2GG7 A;  3PKD A;  5CIK A;  1WN1 A;  1YVM A;  2BH3 A;  2BWS A;  4ZNG A;  2Q95 A;  2P9A A;  1W7V A;  4FLL A;  2V3Y A;  4B28 A;  3CB5 A;  3IU8 A;  1Y1N A;  5CDE A;  2GU5 A;  5E5B A;  4Z7M A;  4U6J A;  2Q94 A;  4U69 A;  2BWU A;  3IU7 A;  3MR1 A;  4FKC A;  3Q6D A;  2BWY A;  5CNX A;  4R60 A;  2GU6 A;  4RZZ A;  4ZWO A;  1CHM A;  1WLR A;  1YW9 A;  5FCF A;  1KQ9 A;  4U6W A;  2BHC A;  1C23 A;  4S2T P;  2Q92 A;  4QR8 A;  4FLI A;  2GG9 A;  2GG5 A;  1XGS A;  4IPA A;  5D6F A;  4MAT A;  3PKC A;  1N51 A;  1A16 A;  2B3H A;  2BHA A;  2EVC A;  5CDV A;  2NQ6 A;  2V6C A;  3CTZ A;  3L7G A;  2EVM A;  5CLS A;  3IG4 A;  4RZY A;  4IDY A;  3TAV A;  2V3X A;  3RVA A;  3FMR A;  3MX6 A;  3PKA A;  1WY2 A;  2BWX A;  1R5H A;  1YW8 A;  2B3K A;  5CE6 A;  2IW2 A;  2EA2 A;  4S01 A;  2BN7 A;  1WBQ A;  4RGZ 1;  2OKN A;  1KP0 A;  4U75 A;  4FUK A;  1BOA A;  1KQ0 A;  4IKR A;  2MAT A;  2V3Z A;  2Q8K A;  2DFI A;  2GZ5 A;  4PNC A;  1W2M A;  1R5G A;  4U70 A;  3D27 A;  1QXY A;  4HXX A;  4OOK A;  3BIQ A;  3FMQ A;  1WKM A;  1BN5 A;  4U73 A;  1WL6 A;  1YW7 A;  4U76 A;  4A6W A;  1XNZ A;  1C24 A;  1R58 A;  2ZSG A;  4A6V A;  1QZY A;  1WL9 A;  1XGM A;  2GG0 A;  2GGC A;  4IKU A;  3CB6 A;  5D6E A;  5CDL A;  3PKB A; 
#chains in the Genus database with same CATH homology
 2GGB A;  4EGE A;  4FO8 A;  2GTX A;  1YJ3 A;  1QXZ A;  2P99 A;  4U6C A;  3TB5 A;  2P98 A;  2GA2 A;  4PV4 A;  4U6E A;  2OAZ A;  4IU6 A;  4JUQ A;  2GG3 A;  1O0X A;  2BWT A;  2GG8 A;  3S6B A;  4ZWU A;  1B59 A;  1XGN A;  4U6Z A;  2NQ7 A;  2BHD A;  2EA4 A;  4FO7 A;  4IKT A;  2BWV A;  3L24 A;  2Q96 A;  1PV9 A;  4FLJ A;  4U1B A;  1B6A A;  4ZWP A;  4IF7 A;  3PKE A;  5JFR A;  2GU4 A;  2BHB A;  1C21 A;  4FLK A;  1JAW A;  4KM3 A;  3MAT A;  2B3L A;  2BWW A;  2BB7 A;  3ROR A;  1C22 A;  3BIP A;  5JI6 A;  3FM3 A;  3IU9 A;  4IKS A;  3BIT A;  1QXW A;  2G6P A;  1C27 A;  2Q93 A;  4S2R P;  2GG2 A;  1MAT A;  2EVO A;  4S00 A;  1XGO A;  5JHU A;  2GU7 A;  1M35 A;  2HOW A;  4U71 A;  2ADU A;  5FCH A;  4IEC A;  2GG7 A;  3PKD A;  5CIK A;  1WN1 A;  1YVM A;  2BH3 A;  2BWS A;  4ZNG A;  2Q95 A;  2P9A A;  1W7V A;  4FLL A;  2V3Y A;  4B28 A;  3CB5 A;  3IU8 A;  1Y1N A;  5CDE A;  2GU5 A;  5E5B A;  4Z7M A;  4U6J A;  2Q94 A;  4U69 A;  2BWU A;  3IU7 A;  3MR1 A;  4FKC A;  3Q6D A;  2BWY A;  5CNX A;  4R60 A;  2GU6 A;  4RZZ A;  4ZWO A;  1CHM A;  1WLR A;  1YW9 A;  5FCF A;  1KQ9 A;  4U6W A;  2BHC A;  1C23 A;  4S2T P;  2Q92 A;  4QR8 A;  4FLI A;  2GG9 A;  2GG5 A;  1XGS A;  4IPA A;  5D6F A;  4MAT A;  3PKC A;  1N51 A;  1A16 A;  2B3H A;  2BHA A;  2EVC A;  5CDV A;  2NQ6 A;  2V6C A;  3CTZ A;  3L7G A;  2EVM A;  5CLS A;  3IG4 A;  4RZY A;  4IDY A;  3TAV A;  2V3X A;  3RVA A;  3FMR A;  3MX6 A;  3PKA A;  1WY2 A;  2BWX A;  1R5H A;  1YW8 A;  2B3K A;  5CE6 A;  2IW2 A;  2EA2 A;  4S01 A;  2BN7 A;  1WBQ A;  4RGZ 1;  2OKN A;  1KP0 A;  4U75 A;  4FUK A;  1BOA A;  1KQ0 A;  4IKR A;  2MAT A;  2V3Z A;  2Q8K A;  2DFI A;  2GZ5 A;  4PNC A;  1W2M A;  1R5G A;  4U70 A;  3D27 A;  1QXY A;  4HXX A;  4OOK A;  3BIQ A;  3FMQ A;  1WKM A;  1BN5 A;  4U73 A;  1WL6 A;  1YW7 A;  4U76 A;  4A6W A;  1XNZ A;  1C24 A;  1R58 A;  2ZSG A;  4A6V A;  1QZY A;  1WL9 A;  1XGM A;  2GG0 A;  2GGC A;  4IKU A;  3CB6 A;  5D6E A;  5CDL A;  3PKB A; 
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