2DD5B

Thiocyanate hydrolase (scnase) from thiobacillus thioparus native holo-enzyme
Total Genus 48

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
152
structure length
152
Chain Sequence
SSIREEVHRHLGTVALMQPALHQQTHAPAPTEITHTLFRAYTRVPHDVGGEADVPIEYHEKEEEIWELNTFATCECLAWRGVWTAEERRRKQNCDVGQTVYLGMPYYGRWLLTAARILVDKQFVTLTELHNKIVEMRERVASGQGLGEYLPP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
3H1 (16-19)TI1 (46-49)TII1 (50-53)EMPTYAH3 (67-82)TIV2 (83-86)AH4 (87-96)TI2 (96-99)AH5 (100-105)AH6 (108-123)TVIII1 (124-127)3H2 (32-34)TIV1 (27-30)AH2 (37-44)TII'1 (148-151)AH1 (4-15)AH7 (128-144)Updating...
connected with : NaN
molecule tags Hydrolase
publication title Structure of thiocyanate hydrolase: a new nitrile hydratase family protein with a novel five-coordinate cobalt(III) center.
pubmed doi rcsb
molecule keywords Thiocyanate hydrolase alpha subunit
total genus 48
structure length 152
sequence length 152
chains with identical sequence E, H, K
ec nomenclature ec 3.5.5.8: Thiocyanate hydrolase.
pdb deposition date 2006-01-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF02211 NHase_beta Nitrile hydratase beta subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.472.20 Mainly Alpha Orthogonal Bundle Cyclin A; domain 1 Cyclin A; domain 1 2dd5B00
2D0QB 2DD4B 3WVDB 1IREB 1AHJB 4ZGJB 1UGPB 1UGRB 1UGQB 2CZ1B 3X20B 2DXBB 2DD5B 4OB3B 2ZPGB 1UGSB 2ZPEB 3QXEB 4ZGDB 2ZZDB 3A8HB 3X24B 4OB2B 2DPPB 3QZ5B 2CZ0B 2AHJB 3X28B 2CZ7B 2CYZB 2ZPBB 4OB1B 3HHTB 2ZPFB 3X26B 3A8GB 4ZGEB 4FM4B 3QZ9B 3QYHB 3VYHB 3A8LB 4OB0B 2QDYB 3A8MB 3VYGB 2ZPHB 2ZPIB 3A8OB 2DXCB 3QYGB 2ZCFB 1V29B 3WVEB 3X25B 2CZ6B
chains in the Genus database with same CATH superfamily
2DD4B 2PMIB 4EORB 5L2WB 3F5XB 4EOPB 4NC6A 2CZ1B 5HBEB 1GY3B 4AI6A 2WEVB 1UNHD 5HVYB 3BHTB 2QFZA 5LQFB 3HO8A 4CXAB 4F7NB 3K7AM 2WJ9A 4F7SB 2KMGA 4YOSA 4EC8B 3DL1A 3WVDB 1UGQB 2DXBB 4YOOA 4YC3B 3BG9A 2WIHB 1UNGD 4BCGB 1JSUB 1FVVB 1P5EB 4UN0A 1QLBA 3HB9A 2D0QB 3DOGB 1W98B 2PHGA 4LOCA 5LMKB 2EUFA 2I53A 1UNLD 4EOLB 4TTHA 5CEIB 5HBJB 1GH6B 2QF7A 3TN8B 1H27B 2ZPHB 3BG5A 4AKHA 2CCIB 4BCHB 5IDNB 4AKGA 4BBRM 3GTMS 3TNHB 5EFQB 1H1QB 3X24B 1OL1B 2DPPB 1H4LD 4F7JB 1C9BA 2CJMB 3X26B 4OR5B 3EIDB 3VYHB 4M6VA 3QYEA 3HBLA 1F5QB 1V29B 2UZDB 2BPMB 1OGUB 5DQVA 1OKWB 4HNVA 2W9FA 4OB2B 4CRLB 2BKZB 4KRCB 2C5NB 4Y72B 3TW7A 4RODA 1OIUB 2DXCB 3QYGB 2R7GA 1GUXB 1E7PA 5ICPB 2B9RA 2KR6A 1O9KA 4QSHA 4BCND 1G3NC 1VOLA 4JX5A 1UGPB 2W9ZA 2I40B 3TNIB 4CFMB 4CFWB 4EOKB 2IN3A 1URCB 1OL2B 2DMEA 4F7LB 4JX6A 1OKVB 2ZCFB 2CZ6B 3MIAB 1H24B 4BCQD 4BCNB 4ZGJB 4Z6YA 1VYWB 4OB3B 3RGFB 4HLQA 4MFDA 2ZZDB 3NDQA 2UZLB 4AKIA 2AHJB 2F2CA 1JOWA 4FM4B 3O0GD 5ACBA 2V22B 3POMA 3X25B 2W2HA 1PKDB 1AHJB 2BS3A 4BCQB 2ZPEB 4ELJA 2ZPFB 3QHWB 1E9HB 1VINA 4ZGEB 4BY1X 2BS2A 3PO3S 3BHUB 4KRDB 2ZPBB 3MI9B 4G6LB 1UGRB 2WIPB 4EOOB 5I5ZB 4YOZA 1UGSB 3QXEB 3DDPB 2JGZB 3BG3A 4NSTB 3M03A 4EOIB 4OB1B 4ROCA 4ELLA 2WFYB 1H1PB 4BCOB 2QDYB 5HBHB 3VYGB 2IW9B 3VKGA 4F6UB 4EONB 4EC9B 2W96A 4EOSB 4CFUB 3A8HB 5BNJB 1FINB 3QYBA 2UZEB 3VKHA 4F70B 3BLHB 3HHTB 3TW6A 2WHBB 1XO2A 4HL4A 5IHYA 4OB0B 3A8MB 4OGRB 5IF1B 4BCMD 2WMAB 3KHIA 5EJCA 3X20B 2ZPGB 2WMBB 1BU2A 2QQ8A 2WPAB 1TD6A 1O9KB 1FKMA 3QHRB 2IW8B 3A8LB 2IVXA 4CFNB 5CYIB 3A8OB 4BCIB 4BCMB 1H26B 4EOJB 3QWLA 4ZGDB 4EOQB 2QDJA 1N4MA 4HNTA 2PK2A 1ZP2A 1AISB 3QZ9B 3BLRB 5IDPB 4JX4A 4MIMA 1JSTB 2C5VB 2G77A 3H4CA 4MFEA 4FX3B 2PJQA 3B57A 1IREB 3MY5B 3EOCB 2UZBB 4EOMB 2PK9B 3G33B 4F6WB 4HNUA 4CFVB 4BCKB 4BCJB 4IMYB 3WVEB 3TNWB 2W99A 1KXUA 4CFUD 4F6SB 2C6TB 2CZ0B 1OIYB 1H28B 4II5B 3A8GB 4BCFB 4BBSM 1OI9B 3BLQB 3DTOA 5HQ0B 2C5XB 1ENWA 2CCHB 2G9XB 1H1RB 3LQ5B 2DD5B 3BHVB 5FGKB 1TFBA 2UUEB 1H25B 3X28B 4CFXB 2CYZB 2CZ7B 2C4GB 4I3ZB 2IW6B 3DDQB 2QGSA 2C5OB 4BY7X 2ZPIB 1AD6A 3EJ1B 3HZJA 1JKWA 1H1SB 2WXVB 1QMZB 3MY1B 3QZ5B 4BXXX 3DJBA 1GUXA 2X1NB 4ROEA 3QYHB 2LW4A 4BCPB 1D3UB 2BS4A 5HNBB 5DQWA
chains in the Genus database with same CATH topology
2DD4B 1IREB 4NC6A 1UGRB 2CZ1B 1UGSB 4AI6A 3QXEB 4HNVA 4OB2B 2QFZA 3HO8A 3BG3A 4OB1B 4HNUA 2QDYB 3VYGB 3TW7A 2WJ9A 2KMGA 2DXCB 3QYGB 1E7PA 3WVEB 3DL1A 2KR6A 4QSHA 3WVDB 4JX5A 3VKGA 1UGPB 1UGQB 2DXBB 3BG9A 3A8HB 3QYBA 2CZ0B 1V29B 3VKHA 3HHTB 3TW6A 3A8GB 4HL4A 4BBSM 4OB0B 3A8MB 4JX6A 1QLBA 2ZCFB 3HB9A 2CZ6B 2D0QB 3KHIA 4ZGJB 5EJCA 3X20B 4Z6YA 2DD5B 4LOCA 2ZPGB 4OB3B 4HLQA 4MFDA 2QQ8A 2ZZDB 4AKIA 2AHJB 1FKMA 3X28B 2CZ7B 2CYZB 2QF7A 4FM4B 3A8LB 2ZPHB 2ZPIB 3A8OB 3BG5A 4AKHA 4AKGA 4BBRM 3HZJA 3X25B 1AHJB 2BS3A 3QWLA 2ZPEB 4ZGDB 3X24B 2DPPB 3QZ5B 2QDJA 4ELJA 2ZPFB 3X26B 4HNTA 4ZGEB 3QZ9B 3QYHB 3VYHB 4M6VA 2BS2A 4JX4A 4MIMA 3QYEA 2G77A 3HBLA 3H4CA 2BS4A 4MFEA 2ZPBB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2D0Q B;  2DD4 B;  3WVD B;  1IRE B;  1AHJ B;  4ZGJ B;  1UGP B;  1UGR B;  1UGQ B;  2CZ1 B;  3X20 B;  2DXB B;  2DD5 B;  4OB3 B;  2ZPG B;  1UGS B;  2ZPE B;  3QXE B;  4ZGD B;  2ZZD B;  3A8H B;  3X24 B;  4OB2 B;  2DPP B;  3QZ5 B;  2CZ0 B;  2AHJ B;  3X28 B;  2CZ7 B;  2CYZ B;  2ZPB B;  4OB1 B;  3HHT B;  2ZPF B;  3X26 B;  3A8G B;  4ZGE B;  4FM4 B;  3QZ9 B;  3QYH B;  3VYH B;  3A8L B;  4OB0 B;  2QDY B;  3A8M B;  3VYG B;  2ZPH B;  2ZPI B;  3A8O B;  2DXC B;  3QYG B;  2ZCF B;  1V29 B;  3WVE B;  3X25 B;  2CZ6 B; 
#chains in the Genus database with same CATH topology
 2DD4 B;  2PMI B;  4EOR B;  5L2W B;  3F5X B;  4EOP B;  4NC6 A;  2CZ1 B;  5HBE B;  1GY3 B;  4AI6 A;  2WEV B;  1UNH D;  5HVY B;  3BHT B;  2QFZ A;  5LQF B;  3HO8 A;  4CXA B;  4F7N B;  3K7A M;  2WJ9 A;  4F7S B;  2KMG A;  4YOS A;  4EC8 B;  3DL1 A;  3WVD B;  1UGQ B;  2DXB B;  4YOO A;  4YC3 B;  3BG9 A;  2WIH B;  1UNG D;  4BCG B;  1JSU B;  1FVV B;  1P5E B;  4UN0 A;  1QLB A;  3HB9 A;  2D0Q B;  3DOG B;  1W98 B;  2PHG A;  4LOC A;  5LMK B;  2EUF A;  2I53 A;  1UNL D;  4EOL B;  4TTH A;  5CEI B;  5HBJ B;  1GH6 B;  2QF7 A;  3TN8 B;  1H27 B;  2ZPH B;  3BG5 A;  4AKH A;  2CCI B;  4BCH B;  5IDN B;  4AKG A;  4BBR M;  3GTM S;  3TNH B;  5EFQ B;  1H1Q B;  3X24 B;  1OL1 B;  2DPP B;  1H4L D;  4F7J B;  1C9B A;  2CJM B;  3X26 B;  4OR5 B;  3EID B;  3VYH B;  4M6V A;  3QYE A;  3HBL A;  1F5Q B;  1V29 B;  2UZD B;  2BPM B;  1OGU B;  5DQV A;  1OKW B;  4HNV A;  2W9F A;  4OB2 B;  4CRL B;  2BKZ B;  4KRC B;  2C5N B;  4Y72 B;  3TW7 A;  4ROD A;  1OIU B;  2DXC B;  3QYG B;  2R7G A;  1GUX B;  1E7P A;  5ICP B;  2B9R A;  2KR6 A;  1O9K A;  4QSH A;  4BCN D;  1G3N C;  1VOL A;  4JX5 A;  1UGP B;  2W9Z A;  2I40 B;  3TNI B;  4CFM B;  4CFW B;  4EOK B;  2IN3 A;  1URC B;  1OL2 B;  2DME A;  4F7L B;  4JX6 A;  1OKV B;  2ZCF B;  2CZ6 B;  3MIA B;  1H24 B;  4BCQ D;  4BCN B;  4ZGJ B;  4Z6Y A;  1VYW B;  4OB3 B;  3RGF B;  4HLQ A;  4MFD A;  2ZZD B;  3NDQ A;  2UZL B;  4AKI A;  2AHJ B;  2F2C A;  1JOW A;  4FM4 B;  3O0G D;  5ACB A;  2V22 B;  3POM A;  3X25 B;  2W2H A;  1PKD B;  1AHJ B;  2BS3 A;  4BCQ B;  2ZPE B;  4ELJ A;  2ZPF B;  3QHW B;  1E9H B;  1VIN A;  4ZGE B;  4BY1 X;  2BS2 A;  3PO3 S;  3BHU B;  4KRD B;  2ZPB B;  3MI9 B;  4G6L B;  1UGR B;  2WIP B;  4EOO B;  5I5Z B;  4YOZ A;  1UGS B;  3QXE B;  3DDP B;  2JGZ B;  3BG3 A;  4NST B;  3M03 A;  4EOI B;  4OB1 B;  4ROC A;  4ELL A;  2WFY B;  1H1P B;  4BCO B;  2QDY B;  5HBH B;  3VYG B;  2IW9 B;  3VKG A;  4F6U B;  4EON B;  4EC9 B;  2W96 A;  4EOS B;  4CFU B;  3A8H B;  5BNJ B;  1FIN B;  3QYB A;  2UZE B;  3VKH A;  4F70 B;  3BLH B;  3HHT B;  3TW6 A;  2WHB B;  1XO2 A;  4HL4 A;  5IHY A;  4OB0 B;  3A8M B;  4OGR B;  5IF1 B;  4BCM D;  2WMA B;  3KHI A;  5EJC A;  3X20 B;  2ZPG B;  2WMB B;  1BU2 A;  2QQ8 A;  2WPA B;  1TD6 A;  1O9K B;  1FKM A;  3QHR B;  2IW8 B;  3A8L B;  2IVX A;  4CFN B;  5CYI B;  3A8O B;  4BCI B;  4BCM B;  1H26 B;  4EOJ B;  3QWL A;  4ZGD B;  4EOQ B;  2QDJ A;  1N4M A;  4HNT A;  2PK2 A;  1ZP2 A;  1AIS B;  3QZ9 B;  3BLR B;  5IDP B;  4JX4 A;  4MIM A;  1JST B;  2C5V B;  2G77 A;  3H4C A;  4MFE A;  4FX3 B;  2PJQ A;  3B57 A;  1IRE B;  3MY5 B;  3EOC B;  2UZB B;  4EOM B;  2PK9 B;  3G33 B;  4F6W B;  4HNU A;  4CFV B;  4BCK B;  4BCJ B;  4IMY B;  3WVE B;  3TNW B;  2W99 A;  1KXU A;  4CFU D;  4F6S B;  2C6T B;  2CZ0 B;  1OIY B;  1H28 B;  4II5 B;  3A8G B;  4BCF B;  4BBS M;  1OI9 B;  3BLQ B;  3DTO A;  5HQ0 B;  2C5X B;  1ENW A;  2CCH B;  2G9X B;  1H1R B;  3LQ5 B;  2DD5 B;  3BHV B;  5FGK B;  1TFB A;  2UUE B;  1H25 B;  3X28 B;  4CFX B;  2CYZ B;  2CZ7 B;  2C4G B;  4I3Z B;  2IW6 B;  3DDQ B;  2QGS A;  2C5O B;  4BY7 X;  2ZPI B;  1AD6 A;  3EJ1 B;  3HZJ A;  1JKW A;  1H1S B;  2WXV B;  1QMZ B;  3MY1 B;  3QZ5 B;  4BXX X;  3DJB A;  1GUX A;  2X1N B;  4ROE A;  3QYH B;  2LW4 A;  4BCP B;  1D3U B;  2BS4 A;  5HNB B;  5DQW A; 
#chains in the Genus database with same CATH homology
 2DD4 B;  1IRE B;  4NC6 A;  1UGR B;  2CZ1 B;  1UGS B;  4AI6 A;  3QXE B;  4HNV A;  4OB2 B;  2QFZ A;  3HO8 A;  3BG3 A;  4OB1 B;  4HNU A;  2QDY B;  3VYG B;  3TW7 A;  2WJ9 A;  2KMG A;  2DXC B;  3QYG B;  1E7P A;  3WVE B;  3DL1 A;  2KR6 A;  4QSH A;  3WVD B;  4JX5 A;  3VKG A;  1UGP B;  1UGQ B;  2DXB B;  3BG9 A;  3A8H B;  3QYB A;  2CZ0 B;  1V29 B;  3VKH A;  3HHT B;  3TW6 A;  3A8G B;  4HL4 A;  4BBS M;  4OB0 B;  3A8M B;  4JX6 A;  1QLB A;  2ZCF B;  3HB9 A;  2CZ6 B;  2D0Q B;  3KHI A;  4ZGJ B;  5EJC A;  3X20 B;  4Z6Y A;  2DD5 B;  4LOC A;  2ZPG B;  4OB3 B;  4HLQ A;  4MFD A;  2QQ8 A;  2ZZD B;  4AKI A;  2AHJ B;  1FKM A;  3X28 B;  2CZ7 B;  2CYZ B;  2QF7 A;  4FM4 B;  3A8L B;  2ZPH B;  2ZPI B;  3A8O B;  3BG5 A;  4AKH A;  4AKG A;  4BBR M;  3HZJ A;  3X25 B;  1AHJ B;  2BS3 A;  3QWL A;  2ZPE B;  4ZGD B;  3X24 B;  2DPP B;  3QZ5 B;  2QDJ A;  4ELJ A;  2ZPF B;  3X26 B;  4HNT A;  4ZGE B;  3QZ9 B;  3QYH B;  3VYH B;  4M6V A;  2BS2 A;  4JX4 A;  4MIM A;  3QYE A;  2G77 A;  3HBL A;  3H4C A;  2BS4 A;  4MFE A;  2ZPB B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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