2LXYA

Nmr structure of 2-mercaptophenol-alpha3c
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
67
structure length
67
Chain Sequence
GSRVKALEEKVKALEEKVKALGGGGRIEELKKKCEELKKKIEELGGGGEVKKVEEEVKKLEEEIKKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags De novo protein
molecule keywords 2-mercaptophenol-alpha3C
publication title Reversible phenol oxidation and reduction in the structurally well-defined 2-Mercaptophenol-alpha(3)C protein.
pubmed doi rcsb
total genus 19
structure length 67
sequence length 67
ec nomenclature
pdb deposition date 2012-09-06
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.70 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Designed single chain three-helix bundle 2lxyA00
2MI7A 2LXYA 2ZXQA 1LQ7A
chains in the Genus database with same CATH superfamily
3D51A 4JWDA 4AZBA 3LMFA 2X3XA 1I4TA 3QA8A 4JNFA 4AZGA 2F18A 1O7DC 2GA9D 2YLAA 4FM3A 2LM0A 3PLTA 2OO2A 2ND0A 3B53X 1E2UA 3ACOA 3CV5A 4R5GA 2FICA 3O3OB 3C7NA 2OBMA 1PS3A 3HAIA 3D50A 3D4YA 1R5EA 3ABHA 4R5JA 2OW7A 4I1QA 3DDGA 3T47A 3RV1A 2YIAA 1I4DA 4HY9A 1OAOA 3HAJA 4EZNA 3BUQA 3ZEDA 2ELBA 1O7DB 3BUIA 4DCNC 1R34A 3BVTA 2Q12A 3KAVA 4DYLA 4R5LA 4NPHA 3DX0A 1TQVA 4UDXX 3CKDA 3EJTA 4G6QA 4EZXA 3VEAA 1SU7A 3B51X 1GNTA 4IM0A 1URUA 2N3KA 4H6HA 3EJRA 1WDZA 4AZ6A 3B52X 1SUFA 4IW0A 2OZNB 4KIKA 4AZIA 4WPCA 1TQTA 4EZPA 3OK8A 3LVTA 1MJGA 3D2EA 1SU6A 4FZSA 3DX4A 4JLCA 5TKYA 1GN9A 2GAFD 4H8SA 4HR1A 4EZUA 2RAIA 2X5CA 2F1AA 4EZYA 5C5BA 4E81A 4UDYX 4HYBA 4F00A 3OHXM 1E9VA 2Q13A 1R33A 4AZCA 4EZRA 4JL9A 2LXYA 2QKWA 2ZXQA 3DDFA 2YL5A 3EJPA 1YWMA 1I49A 2Z8YA 2F7RA 3D2FA 3QNIA 3T4AG 3QNJA 3UITA 2YKTA 4F01A 4EZQA 3DYTA 3M3WA 4AVMA 2ND1A 1UPXA 4IWOA 3BVVA 3I2WA 5FLEX 3SOGA 4M0MA 1LQ7A 4EZOA 2FYVA 3BUDA 3Q84A 3CVRA 1W9MA 1JQKA 3BLBA 3EJSA 4AKVA 3O3NB 4NQIA 3ER8C 4E3CA 4JNEA 2F7QA 1HXKA 3RV0A 3DX3A 3CZSA 2YL8A 4AZ7A 3DX1A 3BVXA 2OW6A 2YI9A 3BVUA 2X3WA 3BUBA 4NSWA 2RAJA 2X3VA 2V0OA 2WYHA 4ATMA 3HAHA 4WPEA 1TQWA 2YL6A 4JWEA 2EX3B 2YL9A 3A98A 3GI7A 2YI8A 3EJQA 4IWQA 4EZSA 3G9GA 5FIGA 1QX1A 2GF4A 2MI7A 1X04A 3KDRA 3LLLA 4R5KA 4R5IA 4AZHA 2F7OA 2Z0NA 2WINM 4IM3A 3I39X 2PMRA 4PO2A 3D4ZA 2PY6A 1I4LA 3DPOA 2ALWA 4EZWA 3DPQA 2F7PA 3DX2A 3ER9B 4KIKB 2C08A 2JNSA 2WYIA 4AZ5A 3Q0KA 2EWFA 3EJUA 3QE6A 3D52A 3T49A 1HTYA 3VEBA 3ERCC 3BVWA 4HR1B 3RPMA 3SYVA 2Z0OA 5C5BB 3T48A 4EZTA 2Z0VA 3QWEA 4AZCB 1GNLA 3CAZA 3O3MB 1TQSA 1DKZA 2KHOA 4JN4A 1OA1A 2YLLA 2RAKA 3L3PA 1DKYA 1QWUA 3L3OM 1X03A 4B9QA 4IWPA 3CZNA 3I04A 2YIVX 1HWWA 5E84A 3F7WA 4JWCA 4D8JA 3T46A 4EZVA 2D4CA 1ZWWA 4JWIA 1ZYLA 3I01A 3KAWA 4EZZA 1U00A 2QFFA 2QXLA 1OA0A 3VKHA 1E1DA 3FD9A 1QWNA 3BUPA 4IM2A 3OWGA 1Y2OA 2EFLA 5KBPA 2F1BA 4H6IA 3DPPA 4FZOA 2NCZA 1SU8A 4BNEA 2OBLA 1DKXA 2O0I1 2RT6A 2JNKA 2YIBA 2D1LA 1TQUA 2EFKA 4FZPA
chains in the Genus database with same CATH topology
2MI7A 2LXYA 2ZXQA 1LQ7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MI7 A;  2LXY A;  2ZXQ A;  1LQ7 A; 
#chains in the Genus database with same CATH topology
 3D51 A;  4JWD A;  4AZB A;  3LMF A;  2X3X A;  1I4T A;  3QA8 A;  4JNF A;  4AZG A;  2F18 A;  1O7D C;  2GA9 D;  2YLA A;  4FM3 A;  2LM0 A;  3PLT A;  2OO2 A;  2ND0 A;  3B53 X;  1E2U A;  3ACO A;  3CV5 A;  4R5G A;  2FIC A;  3O3O B;  3C7N A;  2OBM A;  1PS3 A;  3HAI A;  3D50 A;  3D4Y A;  1R5E A;  3ABH A;  4R5J A;  2OW7 A;  4I1Q A;  3DDG A;  3T47 A;  3RV1 A;  2YIA A;  1I4D A;  4HY9 A;  1OAO A;  3HAJ A;  4EZN A;  3BUQ A;  3ZED A;  2ELB A;  1O7D B;  3BUI A;  4DCN C;  1R34 A;  3BVT A;  2Q12 A;  3KAV A;  4DYL A;  4R5L A;  4NPH A;  3DX0 A;  1TQV A;  4UDX X;  3CKD A;  3EJT A;  4G6Q A;  4EZX A;  3VEA A;  1SU7 A;  3B51 X;  1GNT A;  4IM0 A;  1URU A;  2N3K A;  4H6H A;  3EJR A;  1WDZ A;  4AZ6 A;  3B52 X;  1SUF A;  4IW0 A;  2OZN B;  4KIK A;  4AZI A;  4WPC A;  1TQT A;  4EZP A;  3OK8 A;  3LVT A;  1MJG A;  3D2E A;  1SU6 A;  4FZS A;  3DX4 A;  4JLC A;  5TKY A;  1GN9 A;  2GAF D;  4H8S A;  4HR1 A;  4EZU A;  2RAI A;  2X5C A;  2F1A A;  4EZY A;  5C5B A;  4E81 A;  4UDY X;  4HYB A;  4F00 A;  3OHX M;  1E9V A;  2Q13 A;  1R33 A;  4AZC A;  4EZR A;  4JL9 A;  2LXY A;  2QKW A;  2ZXQ A;  3DDF A;  2YL5 A;  3EJP A;  1YWM A;  1I49 A;  2Z8Y A;  2F7R A;  3D2F A;  3QNI A;  3T4A G;  3QNJ A;  3UIT A;  2YKT A;  4F01 A;  4EZQ A;  3DYT A;  3M3W A;  4AVM A;  2ND1 A;  1UPX A;  4IWO A;  3BVV A;  3I2W A;  5FLE X;  3SOG A;  4M0M A;  1LQ7 A;  4EZO A;  2FYV A;  3BUD A;  3Q84 A;  3CVR A;  1W9M A;  1JQK A;  3BLB A;  3EJS A;  4AKV A;  3O3N B;  4NQI A;  3ER8 C;  4E3C A;  4JNE A;  2F7Q A;  1HXK A;  3RV0 A;  3DX3 A;  3CZS A;  2YL8 A;  4AZ7 A;  3DX1 A;  3BVX A;  2OW6 A;  2YI9 A;  3BVU A;  2X3W A;  3BUB A;  4NSW A;  2RAJ A;  2X3V A;  2V0O A;  2WYH A;  4ATM A;  3HAH A;  4WPE A;  1TQW A;  2YL6 A;  4JWE A;  2EX3 B;  2YL9 A;  3A98 A;  3GI7 A;  2YI8 A;  3EJQ A;  4IWQ A;  4EZS A;  3G9G A;  5FIG A;  1QX1 A;  2GF4 A;  2MI7 A;  1X04 A;  3KDR A;  3LLL A;  4R5K A;  4R5I A;  4AZH A;  2F7O A;  2Z0N A;  2WIN M;  4IM3 A;  3I39 X;  2PMR A;  4PO2 A;  3D4Z A;  2PY6 A;  1I4L A;  3DPO A;  2ALW A;  4EZW A;  3DPQ A;  2F7P A;  3DX2 A;  3ER9 B;  4KIK B;  2C08 A;  2JNS A;  2WYI A;  4AZ5 A;  3Q0K A;  2EWF A;  3EJU A;  3QE6 A;  3D52 A;  3T49 A;  1HTY A;  3VEB A;  3ERC C;  3BVW A;  4HR1 B;  3RPM A;  3SYV A;  2Z0O A;  5C5B B;  3T48 A;  4EZT A;  2Z0V A;  3QWE A;  4AZC B;  1GNL A;  3CAZ A;  3O3M B;  1TQS A;  1DKZ A;  2KHO A;  4JN4 A;  1OA1 A;  2YLL A;  2RAK A;  3L3P A;  1DKY A;  1QWU A;  3L3O M;  1X03 A;  4B9Q A;  4IWP A;  3CZN A;  3I04 A;  2YIV X;  1HWW A;  5E84 A;  3F7W A;  4JWC A;  4D8J A;  3T46 A;  4EZV A;  2D4C A;  1ZWW A;  4JWI A;  1ZYL A;  3I01 A;  3KAW A;  4EZZ A;  1U00 A;  2QFF A;  2QXL A;  1OA0 A;  3VKH A;  1E1D A;  3FD9 A;  1QWN A;  3BUP A;  4IM2 A;  3OWG A;  1Y2O A;  2EFL A;  5KBP A;  2F1B A;  4H6I A;  3DPP A;  4FZO A;  2NCZ A;  1SU8 A;  4BNE A;  2OBL A;  1DKX A;  2O0I 1;  2RT6 A;  2JNK A;  2YIB A;  2D1L A;  1TQU A;  2EFK A;  4FZP A; 
#chains in the Genus database with same CATH homology
 2MI7 A;  2LXY A;  2ZXQ A;  1LQ7 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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