2LXYA

Nmr structure of 2-mercaptophenol-alpha3c
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
67
structure length
67
Chain Sequence
GSRVKALEEKVKALEEKVKALGGGGRIEELKKKCEELKKKIEELGGGGEVKKVEEEVKKLEEEIKKL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 2-mercaptophenol-alpha3C
publication title Reversible phenol oxidation and reduction in the structurally well-defined 2-Mercaptophenol-alpha(3)C protein.
pubmed doi rcsb
molecule tags De novo protein
total genus 19
structure length 67
sequence length 67
ec nomenclature
pdb deposition date 2012-09-06
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.70 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Designed single chain three-helix bundle 2lxyA00
1LQ7A 2MI7A 2ZXQA 2LXYA
chains in the Genus database with same CATH superfamily
3D4YA 3T4AG 2LM0A 1GN9A 1O7DC 2O0I1 2YL6A 3O3NB 4EZXA 2Z8YA 1I4DA 3DX0A 4EZUA 2EFLA 3RV1A 3L3OM 4EZSA 2JNSA 1U00A 3BVVA 1UPXA 4E81A 4EZQA 3L3PA 1X03A 4JWIA 3O3OB 3BUPA 1QWNA 2F7PA 4EZWA 2WYIA 3HAJA 1SU6A 4JWDA 4FZOA 4ATMA 3OWGA 1DKXA 1I4TA 3QNJA 3QE6A 2GA9D 2Z0OA 2YL8A 2F7OA 4JN4A 3UITA 2F1BA 3DX3A 3D52A 2Q13A 3BVUA 3KDRA 3BUDA 1SU7A 5FLEX 2N3KA 4AZBA 3EJRA 1E1DA 2F7QA 3CZSA 2ND0A 4AVMA 3SOGA 1R33A 2C08A 2PY6A 3BVXA 4M0MA 4EZYA 1GNLA 4IM0A 3BVTA 4UDXX 4EZNA 2F7RA 4HR1A 3DDFA 2JNKA 4EZOA 1HXKA 3G9GA 2ELBA 3BUIA 3T48A 4JNEA 1ZWWA 5C5BB 4EZVA 1X04A 2RAKA 3ERCC 3I01A 2Z0VA 3DX2A 3ACOA 3D51A 3D4ZA 2X3WA 4DYLA 3B52X 3EJQA 1URUA 4NPHA 1E2UA 4KIKA 1MJGA 5C5BA 2Z0NA 3I2WA 3RV0A 2MI7A 2ZXQA 2QXLA 1YWMA 3CZNA 2YI8A 4HY9A 3I39X 3DX1A 1ZYLA 3DX4A 3QWEA 2RAJA 1JQKA 4I1QA 3CKDA 1PS3A 3DDGA 1OA0A 2PMRA 4R5IA 2EWFA 3EJPA 4D8JA 2D1LA 2LXYA 1R34A 4NSWA 1GNTA 3PLTA 4FZPA 1O7DB 4AZ5A 3BLBA 3KAVA 4F00A 4HR1B 2EX3B 4E3CA 1LQ7A 1TQVA 1TQUA 2OW7A 4EZZA 4AZ7A 5E84A 2WYHA 4IWOA 2X5CA 4H8SA 3B53X 4JWCA 4FZSA 3HAIA 4R5JA 1SUFA 3T46A 2ND1A 1OAOA 3T49A 1DKYA 1R5EA 4JNFA 3CVRA 4KIKB 2F1AA 4IWPA 4JLCA 4FM3A 3T47A 4AZGA 2YLLA 3SYVA 4AKVA 3Q84A 4F01A 3B51X 2YIBA 2NCZA 2V0OA 2FYVA 3ABHA 1TQSA 3EJUA 1QX1A 4NQIA 3D50A 2QFFA 2F18A 4EZRA 3DPOA 3D2FA 3ER9B 3QA8A 3M3WA 2OO2A 2KHOA 2YL5A 3LLLA 2YIVX 3C7NA 3KAWA 3LVTA 2OZNB 1HWWA 4R5GA 1TQTA 1SU8A 2GAFD 4G6QA 1E9VA 3BVWA 3Q0KA 3DPQA 3FD9A 3OHXM 1TQWA 3VEAA 1OA1A 2EFKA 3D2EA 4JL9A 4IM3A 2OBMA 2FICA 2GF4A 3A98A 4R5LA 2RT6A 3BUQA 4BNEA 3DPPA 4PO2A 4EZTA 5TKYA 1DKZA 1QWUA 3ER8C 2Q12A 4JWEA 4IM2A 3VEBA 3EJSA 4IWQA 4IW0A 1WDZA 2X3VA 4AZIA 3CAZA 3F7WA 5FIGA 3BUBA 4UDYX 2RAIA 3DYTA 4AZHA 4AZCB 3VKHA 2YL9A 4H6IA 4R5KA 1W9MA 2WINM 3RPMA 4HYBA 2YIAA 1HTYA 2ALWA 1I4LA 5KBPA 4WPEA 3ZEDA 2OW6A 1I49A 4AZCA 2OBLA 3QNIA 3EJTA 3GI7A 2YKTA 4EZPA 3OK8A 3I04A 3O3MB 2YI9A 4AZ6A 3HAHA 3LMFA 4WPCA 2QKWA 3CV5A 2D4CA 4B9QA 1Y2OA 4H6HA 2YLAA 4DCNC 2X3XA
chains in the Genus database with same CATH topology
1LQ7A 2MI7A 2ZXQA 2LXYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LQ7 A;  2MI7 A;  2ZXQ A;  2LXY A; 
#chains in the Genus database with same CATH topology
 3D4Y A;  3T4A G;  2LM0 A;  1GN9 A;  1O7D C;  2O0I 1;  2YL6 A;  3O3N B;  4EZX A;  2Z8Y A;  1I4D A;  3DX0 A;  4EZU A;  2EFL A;  3RV1 A;  3L3O M;  4EZS A;  2JNS A;  1U00 A;  3BVV A;  1UPX A;  4E81 A;  4EZQ A;  3L3P A;  1X03 A;  4JWI A;  3O3O B;  3BUP A;  1QWN A;  2F7P A;  4EZW A;  2WYI A;  3HAJ A;  1SU6 A;  4JWD A;  4FZO A;  4ATM A;  3OWG A;  1DKX A;  1I4T A;  3QNJ A;  3QE6 A;  2GA9 D;  2Z0O A;  2YL8 A;  2F7O A;  4JN4 A;  3UIT A;  2F1B A;  3DX3 A;  3D52 A;  2Q13 A;  3BVU A;  3KDR A;  3BUD A;  1SU7 A;  5FLE X;  2N3K A;  4AZB A;  3EJR A;  1E1D A;  2F7Q A;  3CZS A;  2ND0 A;  4AVM A;  3SOG A;  1R33 A;  2C08 A;  2PY6 A;  3BVX A;  4M0M A;  4EZY A;  1GNL A;  4IM0 A;  3BVT A;  4UDX X;  4EZN A;  2F7R A;  4HR1 A;  3DDF A;  2JNK A;  4EZO A;  1HXK A;  3G9G A;  2ELB A;  3BUI A;  3T48 A;  4JNE A;  1ZWW A;  5C5B B;  4EZV A;  1X04 A;  2RAK A;  3ERC C;  3I01 A;  2Z0V A;  3DX2 A;  3ACO A;  3D51 A;  3D4Z A;  2X3W A;  4DYL A;  3B52 X;  3EJQ A;  1URU A;  4NPH A;  1E2U A;  4KIK A;  1MJG A;  5C5B A;  2Z0N A;  3I2W A;  3RV0 A;  2MI7 A;  2ZXQ A;  2QXL A;  1YWM A;  3CZN A;  2YI8 A;  4HY9 A;  3I39 X;  3DX1 A;  1ZYL A;  3DX4 A;  3QWE A;  2RAJ A;  1JQK A;  4I1Q A;  3CKD A;  1PS3 A;  3DDG A;  1OA0 A;  2PMR A;  4R5I A;  2EWF A;  3EJP A;  4D8J A;  2D1L A;  2LXY A;  1R34 A;  4NSW A;  1GNT A;  3PLT A;  4FZP A;  1O7D B;  4AZ5 A;  3BLB A;  3KAV A;  4F00 A;  4HR1 B;  2EX3 B;  4E3C A;  1LQ7 A;  1TQV A;  1TQU A;  2OW7 A;  4EZZ A;  4AZ7 A;  5E84 A;  2WYH A;  4IWO A;  2X5C A;  4H8S A;  3B53 X;  4JWC A;  4FZS A;  3HAI A;  4R5J A;  1SUF A;  3T46 A;  2ND1 A;  1OAO A;  3T49 A;  1DKY A;  1R5E A;  4JNF A;  3CVR A;  4KIK B;  2F1A A;  4IWP A;  4JLC A;  4FM3 A;  3T47 A;  4AZG A;  2YLL A;  3SYV A;  4AKV A;  3Q84 A;  4F01 A;  3B51 X;  2YIB A;  2NCZ A;  2V0O A;  2FYV A;  3ABH A;  1TQS A;  3EJU A;  1QX1 A;  4NQI A;  3D50 A;  2QFF A;  2F18 A;  4EZR A;  3DPO A;  3D2F A;  3ER9 B;  3QA8 A;  3M3W A;  2OO2 A;  2KHO A;  2YL5 A;  3LLL A;  2YIV X;  3C7N A;  3KAW A;  3LVT A;  2OZN B;  1HWW A;  4R5G A;  1TQT A;  1SU8 A;  2GAF D;  4G6Q A;  1E9V A;  3BVW A;  3Q0K A;  3DPQ A;  3FD9 A;  3OHX M;  1TQW A;  3VEA A;  1OA1 A;  2EFK A;  3D2E A;  4JL9 A;  4IM3 A;  2OBM A;  2FIC A;  2GF4 A;  3A98 A;  4R5L A;  2RT6 A;  3BUQ A;  4BNE A;  3DPP A;  4PO2 A;  4EZT A;  5TKY A;  1DKZ A;  1QWU A;  3ER8 C;  2Q12 A;  4JWE A;  4IM2 A;  3VEB A;  3EJS A;  4IWQ A;  4IW0 A;  1WDZ A;  2X3V A;  4AZI A;  3CAZ A;  3F7W A;  5FIG A;  3BUB A;  4UDY X;  2RAI A;  3DYT A;  4AZH A;  4AZC B;  3VKH A;  2YL9 A;  4H6I A;  4R5K A;  1W9M A;  2WIN M;  3RPM A;  4HYB A;  2YIA A;  1HTY A;  2ALW A;  1I4L A;  5KBP A;  4WPE A;  3ZED A;  2OW6 A;  1I49 A;  4AZC A;  2OBL A;  3QNI A;  3EJT A;  3GI7 A;  2YKT A;  4EZP A;  3OK8 A;  3I04 A;  3O3M B;  2YI9 A;  4AZ6 A;  3HAH A;  3LMF A;  4WPC A;  2QKW A;  3CV5 A;  2D4C A;  4B9Q A;  1Y2O A;  4H6H A;  2YLA A;  4DCN C;  2X3X A; 
#chains in the Genus database with same CATH homology
 1LQ7 A;  2MI7 A;  2ZXQ A;  2LXY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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