3KAVA

Crystal structure of the mutant (l80m) pa2107 protein from pseudomonas aeruginosa, northeast structural genomics consortium target par198
Total Genus 43
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
102
structure length
102
Chain Sequence
AAQAPEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLMERRSPWAPAACELAARYALACAERCDGDEPLERECAGACRRFVEACRPLL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords uncharacterized protein PA2107
publication title Northeast Structural Genomics Consortium Target PaR198
rcsb
source organism Pseudomonas aeruginosa
molecule tags Structural genomics, unknown function
total genus 43
structure length 102
sequence length 102
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2009-10-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03860 DUF326 Domain of Unknown Function (DUF326)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.360 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 3kavA00
3LMFA 5FIGA 3KAVA 3KAWA
chains in the Genus database with same CATH superfamily
4DYLA 1HWWA 1R34A 1U00A 2EWFA 2LM0A 3L3OM 3OK8A 4WPCA 2Z0VA 2F7PA 3CZSA 3KAWA 2YI8A 3QNIA 4IWPA 2YLAA 1SU7A 3I2WA 2ZXQA 3FD9A 4AVMA 2EFKA 2OW6A 3QA8A 4R5IA 4EZSA 3CVRA 2D4CA 4FZPA 3M3WA 3O3MB 4EZOA 3SOGA 3CKDA 4H6HA 3T49A 1E2UA 2X3XA 2F18A 3QE6A 4M0MA 1HXKA 1Y2OA 4JWEA 4EZVA 2YIAA 4KIKB 3DX4A 2RT6A 4JWCA 2QFFA 3KDRA 4F01A 4E3CA 2ND1A 2YI9A 2Q12A 3DDFA 2FYVA 1DKZA 3EJSA 4FZOA 1QWUA 1GNTA 4JNEA 2JNSA 1R33A 1SUFA 3I39X 4HY9A 3LMFA 2PMRA 3ER8C 2EX3B 4AZGA 4R5KA 4E81A 1OA0A 4AZIA 5E84A 1JQKA 4AZ6A 2OZNB 1E9VA 1DKXA 3BVVA 3B52X 2Q13A 4EZRA 3HAHA 2PY6A 2F7QA 3ERCC 4UDYX 3B53X 4PO2A 4IWQA 2Z0NA 1HTYA 2YLLA 4FZSA 3HAJA 3F7WA 4NPHA 4B9QA 3RV0A 3PLTA 3VKHA 1TQSA 3QWEA 3OHXM 5FIGA 2GA9D 1I4DA 3BUDA 3BLBA 3KAVA 3OWGA 5C5BA 2YL9A 4EZPA 2RAIA 1OA1A 3D4YA 2D1LA 4G6QA 4I1QA 2KHOA 1O7DB 3DX3A 3DX0A 4H6IA 2YL6A 2RAKA 3VEBA 3T4AG 4JWDA 3T46A 1O7DC 4NQIA 2OBLA 3I01A 2EFLA 2YKTA 1I49A 2V0OA 2N3KA 3C7NA 2LXYA 4JLCA 2OW7A 4EZUA 1X04A 1I4TA 4IW0A 4WPEA 1GN9A 3CZNA 2GAFD 2NCZA 3UITA 1ZYLA 3G9GA 4AZCA 3DPOA 4NSWA 1SU8A 4AZHA 2X3WA 5TKYA 3L3PA 4H8SA 3QNJA 3I04A 3O3OB 4JWIA 3EJTA 2ALWA 4D8JA 3ABHA 1YWMA 3GI7A 4AZBA 3CAZA 3BUQA 3DYTA 2C08A 3VEAA 5KBPA 2Z8YA 1SU6A 2Z0OA 3D2FA 3D52A 3LVTA 3DX2A 2FICA 4HR1A 3D50A 3BUPA 2OO2A 2QKWA 1PS3A 1TQWA 2YL8A 1X03A 3ER9B 1W9MA 3DX1A 5FLEX 3Q84A 4EZNA 1URUA 4AZCB 2F1BA 4IWOA 1QWNA 3BVUA 4R5GA 4JN4A 2OBMA 4BNEA 3RPMA 1ZWWA 3EJRA 1I4LA 1QX1A 4UDXX 2X5CA 3D4ZA 3SYVA 4EZYA 4EZQA 4F00A 3BVXA 4AZ5A 4IM2A 4EZZA 1E1DA 2GF4A 3D51A 4EZXA 3EJPA 3DPPA 4JNFA 3EJUA 3BUIA 3HAIA 4IM3A 3BUBA 3DDGA 3D2EA 4HR1B 2F1AA 3B51X 4EZTA 4FM3A 3LLLA 2WYIA 1GNLA 2O0I1 4AZ7A 4IM0A 3O3NB 1OAOA 2ELBA 3EJQA 1DKYA 2QXLA 5C5BB 4HYBA 2F7RA 2YL5A 3RV1A 2YIBA 2WINM 3BVWA 2WYHA 2RAJA 1UPXA 3A98A 3Q0KA 3ACOA 1TQTA 4R5JA 4ATMA 4DCNC 1TQVA 1MJGA 2F7OA 3T47A 1WDZA 4EZWA 2JNKA 1LQ7A 4KIKA 4R5LA 3DPQA 2ND0A 1TQUA 4JL9A 2X3VA 3BVTA 1R5EA 3T48A 3ZEDA 2MI7A 3CV5A 2YIVX 4AKVA
chains in the Genus database with same CATH topology
1U00A 1GN9A 2EWFA 3B52X 2LM0A 4IM2A 3L3OM 4EZZA 4EZRA 1E1DA 2GAFD 2NCZA 3UITA 1ZYLA 3DPOA 3KAWA 2PY6A 2YI8A 4IWPA 3ERCC 1SU7A 1SU8A 3FD9A 4UDYX 4EZXA 3B53X 4PO2A 4IWQA 5TKYA 3DPPA 4JNFA 3QNJA 3I04A 4IM3A 3QA8A 3F7WA 3O3OB 4R5IA 4EZSA 4NPHA 4JWIA 4B9QA 3D2EA 4HR1B 3RV0A 4D8JA 3B51X 3VKHA 4EZTA 4FM3A 3OHXM 3GI7A 5FIGA 1GNLA 3O3MB 4EZOA 4H6HA 3T49A 2GA9D 1E2UA 4IM0A 3O3NB 1OAOA 3VEAA 4M0MA 3KAVA 1DKYA 2QXLA 2Z8YA 1SU6A 3OWGA 4HYBA 3RV1A 2YIBA 3D2FA 2WINM 4EZPA 4JWEA 4EZVA 2YIAA 4KIKB 1OA1A 4HR1A 1UPXA 2RT6A 4JWCA 2QFFA 3A98A 3KDRA 4G6QA 4F01A 4E3CA 2KHOA 2ND1A 4H6IA 4R5JA 2YI9A 3VEBA 3T4AG 3ER9B 4JWDA 1MJGA 1W9MA 3T47A 3T46A 5FLEX 1DKZA 4EZNA 2OBLA 3I01A 4EZWA 4IWOA 1GNTA 4JNEA 4R5GA 2JNSA 4JN4A 2OBMA 1SUFA 2N3KA 3I39X 3C7NA 4KIKA 4R5LA 3DPQA 4HY9A 3LMFA 2ND0A 3ER8C 2EX3B 4JL9A 4JLCA 4UDXX 2X5CA 4R5KA 4E81A 1OA0A 4EZUA 3T48A 3ZEDA 5E84A 1JQKA 4IW0A 4EZYA 2YIVX 1E9VA 4EZQA 4F00A 1DKXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LMF A;  5FIG A;  3KAV A;  3KAW A; 
#chains in the Genus database with same CATH topology
 4DYL A;  1HWW A;  1R34 A;  1U00 A;  2EWF A;  2LM0 A;  3L3O M;  3OK8 A;  4WPC A;  2Z0V A;  2F7P A;  3CZS A;  3KAW A;  2YI8 A;  3QNI A;  4IWP A;  2YLA A;  1SU7 A;  3I2W A;  2ZXQ A;  3FD9 A;  4AVM A;  2EFK A;  2OW6 A;  3QA8 A;  4R5I A;  4EZS A;  3CVR A;  2D4C A;  4FZP A;  3M3W A;  3O3M B;  4EZO A;  3SOG A;  3CKD A;  4H6H A;  3T49 A;  1E2U A;  2X3X A;  2F18 A;  3QE6 A;  4M0M A;  1HXK A;  1Y2O A;  4JWE A;  4EZV A;  2YIA A;  4KIK B;  3DX4 A;  2RT6 A;  4JWC A;  2QFF A;  3KDR A;  4F01 A;  4E3C A;  2ND1 A;  2YI9 A;  2Q12 A;  3DDF A;  2FYV A;  1DKZ A;  3EJS A;  4FZO A;  1QWU A;  1GNT A;  4JNE A;  2JNS A;  1R33 A;  1SUF A;  3I39 X;  4HY9 A;  3LMF A;  2PMR A;  3ER8 C;  2EX3 B;  4AZG A;  4R5K A;  4E81 A;  1OA0 A;  4AZI A;  5E84 A;  1JQK A;  4AZ6 A;  2OZN B;  1E9V A;  1DKX A;  3BVV A;  3B52 X;  2Q13 A;  4EZR A;  3HAH A;  2PY6 A;  2F7Q A;  3ERC C;  4UDY X;  3B53 X;  4PO2 A;  4IWQ A;  2Z0N A;  1HTY A;  2YLL A;  4FZS A;  3HAJ A;  3F7W A;  4NPH A;  4B9Q A;  3RV0 A;  3PLT A;  3VKH A;  1TQS A;  3QWE A;  3OHX M;  5FIG A;  2GA9 D;  1I4D A;  3BUD A;  3BLB A;  3KAV A;  3OWG A;  5C5B A;  2YL9 A;  4EZP A;  2RAI A;  1OA1 A;  3D4Y A;  2D1L A;  4G6Q A;  4I1Q A;  2KHO A;  1O7D B;  3DX3 A;  3DX0 A;  4H6I A;  2YL6 A;  2RAK A;  3VEB A;  3T4A G;  4JWD A;  3T46 A;  1O7D C;  4NQI A;  2OBL A;  3I01 A;  2EFL A;  2YKT A;  1I49 A;  2V0O A;  2N3K A;  3C7N A;  2LXY A;  4JLC A;  2OW7 A;  4EZU A;  1X04 A;  1I4T A;  4IW0 A;  4WPE A;  1GN9 A;  3CZN A;  2GAF D;  2NCZ A;  3UIT A;  1ZYL A;  3G9G A;  4AZC A;  3DPO A;  4NSW A;  1SU8 A;  4AZH A;  2X3W A;  5TKY A;  3L3P A;  4H8S A;  3QNJ A;  3I04 A;  3O3O B;  4JWI A;  3EJT A;  2ALW A;  4D8J A;  3ABH A;  1YWM A;  3GI7 A;  4AZB A;  3CAZ A;  3BUQ A;  3DYT A;  2C08 A;  3VEA A;  5KBP A;  2Z8Y A;  1SU6 A;  2Z0O A;  3D2F A;  3D52 A;  3LVT A;  3DX2 A;  2FIC A;  4HR1 A;  3D50 A;  3BUP A;  2OO2 A;  2QKW A;  1PS3 A;  1TQW A;  2YL8 A;  1X03 A;  3ER9 B;  1W9M A;  3DX1 A;  5FLE X;  3Q84 A;  4EZN A;  1URU A;  4AZC B;  2F1B A;  4IWO A;  1QWN A;  3BVU A;  4R5G A;  4JN4 A;  2OBM A;  4BNE A;  3RPM A;  1ZWW A;  3EJR A;  1I4L A;  1QX1 A;  4UDX X;  2X5C A;  3D4Z A;  3SYV A;  4EZY A;  4EZQ A;  4F00 A;  3BVX A;  4AZ5 A;  4IM2 A;  4EZZ A;  1E1D A;  2GF4 A;  3D51 A;  4EZX A;  3EJP A;  3DPP A;  4JNF A;  3EJU A;  3BUI A;  3HAI A;  4IM3 A;  3BUB A;  3DDG A;  3D2E A;  4HR1 B;  2F1A A;  3B51 X;  4EZT A;  4FM3 A;  3LLL A;  2WYI A;  1GNL A;  2O0I 1;  4AZ7 A;  4IM0 A;  3O3N B;  1OAO A;  2ELB A;  3EJQ A;  1DKY A;  2QXL A;  5C5B B;  4HYB A;  2F7R A;  2YL5 A;  3RV1 A;  2YIB A;  2WIN M;  3BVW A;  2WYH A;  2RAJ A;  1UPX A;  3A98 A;  3Q0K A;  3ACO A;  1TQT A;  4R5J A;  4ATM A;  4DCN C;  1TQV A;  1MJG A;  2F7O A;  3T47 A;  1WDZ A;  4EZW A;  2JNK A;  1LQ7 A;  4KIK A;  4R5L A;  3DPQ A;  2ND0 A;  1TQU A;  4JL9 A;  2X3V A;  3BVT A;  1R5E A;  3T48 A;  3ZED A;  2MI7 A;  3CV5 A;  2YIV X;  4AKV A; 
#chains in the Genus database with same CATH homology
 1U00 A;  1GN9 A;  2EWF A;  3B52 X;  2LM0 A;  4IM2 A;  3L3O M;  4EZZ A;  4EZR A;  1E1D A;  2GAF D;  2NCZ A;  3UIT A;  1ZYL A;  3DPO A;  3KAW A;  2PY6 A;  2YI8 A;  4IWP A;  3ERC C;  1SU7 A;  1SU8 A;  3FD9 A;  4UDY X;  4EZX A;  3B53 X;  4PO2 A;  4IWQ A;  5TKY A;  3DPP A;  4JNF A;  3QNJ A;  3I04 A;  4IM3 A;  3QA8 A;  3F7W A;  3O3O B;  4R5I A;  4EZS A;  4NPH A;  4JWI A;  4B9Q A;  3D2E A;  4HR1 B;  3RV0 A;  4D8J A;  3B51 X;  3VKH A;  4EZT A;  4FM3 A;  3OHX M;  3GI7 A;  5FIG A;  1GNL A;  3O3M B;  4EZO A;  4H6H A;  3T49 A;  2GA9 D;  1E2U A;  4IM0 A;  3O3N B;  1OAO A;  3VEA A;  4M0M A;  3KAV A;  1DKY A;  2QXL A;  2Z8Y A;  1SU6 A;  3OWG A;  4HYB A;  3RV1 A;  2YIB A;  3D2F A;  2WIN M;  4EZP A;  4JWE A;  4EZV A;  2YIA A;  4KIK B;  1OA1 A;  4HR1 A;  1UPX A;  2RT6 A;  4JWC A;  2QFF A;  3A98 A;  3KDR A;  4G6Q A;  4F01 A;  4E3C A;  2KHO A;  2ND1 A;  4H6I A;  4R5J A;  2YI9 A;  3VEB A;  3T4A G;  3ER9 B;  4JWD A;  1MJG A;  1W9M A;  3T47 A;  3T46 A;  5FLE X;  1DKZ A;  4EZN A;  2OBL A;  3I01 A;  4EZW A;  4IWO A;  1GNT A;  4JNE A;  4R5G A;  2JNS A;  4JN4 A;  2OBM A;  1SUF A;  2N3K A;  3I39 X;  3C7N A;  4KIK A;  4R5L A;  3DPQ A;  4HY9 A;  3LMF A;  2ND0 A;  3ER8 C;  2EX3 B;  4JL9 A;  4JLC A;  4UDX X;  2X5C A;  4R5K A;  4E81 A;  1OA0 A;  4EZU A;  3T48 A;  3ZED A;  5E84 A;  1JQK A;  4IW0 A;  4EZY A;  2YIV X;  1E9V A;  4EZQ A;  4F00 A;  1DKX A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...