3T49A

Crystal structure of truncated form of staphylococcal complement inhibitor b (scin-b) at 1.5 angstrom
Total Genus 29
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
29
sequence length
70
structure length
70
Chain Sequence
GSAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Fibrinogen-binding protein
publication title Diversity in the C3b Convertase Contact Residues and Tertiary Structures of the Staphylococcal Complement Inhibitor (SCIN) Protein Family.
pubmed doi rcsb
source organism Staphylococcus aureus subsp. aureus
total genus 29
structure length 70
sequence length 70
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2011-07-25
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.10 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 3t49A00
4PO2A 4EZUA 1DKXA 4H6HA 4HY9A 3QNJA 4E81A 2QXLA 4JWDA 5E84A 3DPQA 3L3OM 4EZQA 3C7NA 4JWEA 3D2EA 4R5GA 4EZVA 4JN4A 3OHXM 3T48A 4EZOA 4EZZA 4JWCA 4EZXA 4EZYA 4H6IA 4EZSA 4R5KA 4JNFA 3T4AG 4EZNA 3DPPA 4R5LA 1DKYA 4EZPA 1U00A 4HYBA 4EZTA 4EZRA 3T47A 5TKYA 1DKZA 4JNEA 4JWIA 2QFFA 4R5IA 3T46A 3D2FA 3DPOA 4EZWA 3T49A 4B9QA 4F00A 4F01A 4R5JA 2KHOA 2WINM
chains in the Genus database with same CATH superfamily
2YI9A 2YLLA 3BUQA 2YIBA 4EZQA 1HTYA 3OK8A 2OBLA 3RV1A 1JQKA 2Z0OA 4JWCA 4EZSA 2F18A 1MJGA 2PY6A 4IM3A 1SU6A 2EFKA 3GI7A 1I4TA 4NPHA 4ATMA 3EJRA 2YIAA 2YLAA 3VKHA 4AKVA 3D50A 3I2WA 3L3PA 2Z8YA 4EZVA 1YWMA 3BVUA 2Q12A 3RPMA 3BVTA 3CV5A 4FZPA 4KIKB 3D2FA 4AZ6A 3OWGA 4H6HA 1E2UA 3L3OM 3I04A 3LVTA 4EZOA 4AZGA 1PS3A 2ND0A 1I4LA 2F1AA 4WPEA 4I1QA 3I39X 2RAKA 2D4CA 4UDXX 1W9MA 3G9GA 4DCNC 3T49A 3EJSA 4M0MA 1HWWA 2X3VA 1OAOA 4HY9A 3QE6A 1LQ7A 2FICA 3F7WA 3D4YA 3BLBA 4AZCA 3DX0A 3EJTA 5FIGA 3DX4A 5C5BA 4EZWA 4R5JA 3DX2A 2WINM 3DDGA 2YKTA 1SU8A 3OHXM 3FD9A 1R5EA 4H6IA 4JNFA 4NQIA 2Q13A 4AZ5A 3KDRA 1O7DC 1E1DA 5TKYA 4F01A 2F1BA 3ABHA 2EWFA 5E84A 1GNLA 4R5GA 2YI8A 4JLCA 3CZSA 4HR1A 3CAZA 4BNEA 5FLEX 1GN9A 3QA8A 3I01A 3QNJA 2QXLA 1R34A 3BVWA 3DPQA 2YL8A 3Q84A 1SU7A 2YIVX 3CVRA 1I49A 3HAJA 1U00A 1OA1A 3RV0A 3D52A 1HXKA 4JNEA 3T46A 4IM0A 3KAWA 3HAHA 4E81A 4JWDA 2LXYA 3D2EA 2MI7A 2EX3B 1QX1A 4IWOA 4R5KA 3B53X 1WDZA 1E9VA 1Y2OA 4EZTA 4FZSA 3BUPA 3SYVA 3KAVA 3CZNA 3DX3A 2O0I1 4E3CA 3ER8C 3BVXA 3T48A 4EZZA 4KIKA 4EZYA 3T4AG 2WYHA 3T47A 2OBMA 2JNKA 3Q0KA 2F7PA 4JL9A 4IWQA 4DYLA 2OO2A 2RAIA 2ALWA 3HAIA 3VEAA 1TQSA 2GF4A 2OW7A 2Z0NA 2Z0VA 2N3KA 2JNSA 2D1LA 2F7RA 3QWEA 4EZUA 1QWNA 3EJUA 3QNIA 1O7DB 3ACOA 2OW6A 4AZBA 2RT6A 3LLLA 3M3WA 4JWIA 3DYTA 1TQTA 1DKXA 1R33A 3EJPA 2FYVA 1TQUA 1GNTA 3O3MB 3DPPA 3B51X 2OZNB 4EZRA 3VEBA 1DKZA 2QFFA 2ND1A 2KHOA 1UPXA 1ZYLA 4PO2A 4UDYX 4WPCA 4JN4A 4G6QA 3O3NB 4AZHA 4AVMA 4EZNA 3PLTA 1URUA 3D4ZA 1ZWWA 2YL9A 3DDFA 3D51A 4AZCB 2PMRA 4FM3A 2F7OA 2QKWA 2NCZA 1X04A 4JWEA 5C5BB 3ER9B 2YL5A 4EZXA 4AZ7A 1TQVA 2V0OA 3BUDA 2X3WA 2F7QA 3DX1A 4B9QA 1X03A 4IM2A 1OA0A 2LM0A 3SOGA 3UITA 1I4DA 3C7NA 4AZIA 3BUBA 3ERCC 3EJQA 3ZEDA 1QWUA 1SUFA 3CKDA 4R5LA 1DKYA 4NSWA 4HYBA 2GA9D 2GAFD 4H8SA 4IW0A 4F00A 4FZOA 3LMFA 4HR1B 4IWPA 2EFLA 2X5CA 2X3XA 2ELBA 4D8JA 2ZXQA 1TQWA 3A98A 4EZPA 5KBPA 3BVVA 3O3OB 2C08A 4R5IA 2WYIA 2YL6A 2RAJA 3DPOA 3B52X 3BUIA
chains in the Genus database with same CATH topology
4E3CA 2YI9A 4PO2A 4UDYX 2YIBA 1SU8A 4EZQA 3ER8C 4JN4A 3OHXM 3T48A 2OBLA 3RV1A 4EZZA 3FD9A 1JQKA 4JWCA 4KIKA 4EZYA 4H6IA 4G6QA 3O3NB 4EZSA 4JNFA 3T4AG 4EZNA 1MJGA 3KDRA 2PY6A 3T47A 4IM3A 1E1DA 5TKYA 2OBMA 1SU6A 3GI7A 4NPHA 4F01A 4JL9A 2YIAA 4FM3A 3VKHA 4IWQA 2NCZA 2EWFA 5E84A 1ZYLA 1GNLA 4JWEA 2Z8YA 4R5GA 4EZVA 3ER9B 2YI8A 4EZXA 4JLCA 3VEAA 4HR1A 5FLEX 2N3KA 2JNSA 4KIKB 1GN9A 3D2FA 3QA8A 4B9QA 4IM2A 1OA0A 2LM0A 3OWGA 4EZUA 3I01A 4H6HA 3QNJA 2QXLA 1E2UA 3DPQA 3L3OM 3UITA 3C7NA 3I04A 4EZOA 2ND0A 3ERCC 1SU7A 3ZEDA 2YIVX 1SUFA 2RT6A 4R5LA 1DKYA 1U00A 3I39X 4HYBA 1OA1A 3RV0A 4UDXX 2GA9D 4JNEA 1W9MA 4JWIA 2GAFD 3T46A 4IM0A 4IW0A 3T49A 4F00A 3LMFA 3KAWA 4HR1B 4IWPA 4M0MA 2X5CA 1DKXA 4HY9A 1OAOA 4E81A 4JWDA 3D2EA 3F7WA 2EX3B 4D8JA 4IWOA 4R5KA 1GNTA 3B53X 3O3MB 3A98A 3DPPA 1E9VA 3B51X 4EZPA 5FIGA 4EZTA 4EZRA 3O3OB 3VEBA 1DKZA 4R5IA 2QFFA 3DPOA 4EZWA 2ND1A 3KAVA 1UPXA 4R5JA 3B52X 2KHOA 2WINM
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PO2 A;  4EZU A;  1DKX A;  4H6H A;  4HY9 A;  3QNJ A;  4E81 A;  2QXL A;  4JWD A;  5E84 A;  3DPQ A;  3L3O M;  4EZQ A;  3C7N A;  4JWE A;  3D2E A;  4R5G A;  4EZV A;  4JN4 A;  3OHX M;  3T48 A;  4EZO A;  4EZZ A;  4JWC A;  4EZX A;  4EZY A;  4H6I A;  4EZS A;  4R5K A;  4JNF A;  3T4A G;  4EZN A;  3DPP A;  4R5L A;  1DKY A;  4EZP A;  1U00 A;  4HYB A;  4EZT A;  4EZR A;  3T47 A;  5TKY A;  1DKZ A;  4JNE A;  4JWI A;  2QFF A;  4R5I A;  3T46 A;  3D2F A;  3DPO A;  4EZW A;  3T49 A;  4B9Q A;  4F00 A;  4F01 A;  4R5J A;  2KHO A;  2WIN M; 
#chains in the Genus database with same CATH topology
 2YI9 A;  2YLL A;  3BUQ A;  2YIB A;  4EZQ A;  1HTY A;  3OK8 A;  2OBL A;  3RV1 A;  1JQK A;  2Z0O A;  4JWC A;  4EZS A;  2F18 A;  1MJG A;  2PY6 A;  4IM3 A;  1SU6 A;  2EFK A;  3GI7 A;  1I4T A;  4NPH A;  4ATM A;  3EJR A;  2YIA A;  2YLA A;  3VKH A;  4AKV A;  3D50 A;  3I2W A;  3L3P A;  2Z8Y A;  4EZV A;  1YWM A;  3BVU A;  2Q12 A;  3RPM A;  3BVT A;  3CV5 A;  4FZP A;  4KIK B;  3D2F A;  4AZ6 A;  3OWG A;  4H6H A;  1E2U A;  3L3O M;  3I04 A;  3LVT A;  4EZO A;  4AZG A;  1PS3 A;  2ND0 A;  1I4L A;  2F1A A;  4WPE A;  4I1Q A;  3I39 X;  2RAK A;  2D4C A;  4UDX X;  1W9M A;  3G9G A;  4DCN C;  3T49 A;  3EJS A;  4M0M A;  1HWW A;  2X3V A;  1OAO A;  4HY9 A;  3QE6 A;  1LQ7 A;  2FIC A;  3F7W A;  3D4Y A;  3BLB A;  4AZC A;  3DX0 A;  3EJT A;  5FIG A;  3DX4 A;  5C5B A;  4EZW A;  4R5J A;  3DX2 A;  2WIN M;  3DDG A;  2YKT A;  1SU8 A;  3OHX M;  3FD9 A;  1R5E A;  4H6I A;  4JNF A;  4NQI A;  2Q13 A;  4AZ5 A;  3KDR A;  1O7D C;  1E1D A;  5TKY A;  4F01 A;  2F1B A;  3ABH A;  2EWF A;  5E84 A;  1GNL A;  4R5G A;  2YI8 A;  4JLC A;  3CZS A;  4HR1 A;  3CAZ A;  4BNE A;  5FLE X;  1GN9 A;  3QA8 A;  3I01 A;  3QNJ A;  2QXL A;  1R34 A;  3BVW A;  3DPQ A;  2YL8 A;  3Q84 A;  1SU7 A;  2YIV X;  3CVR A;  1I49 A;  3HAJ A;  1U00 A;  1OA1 A;  3RV0 A;  3D52 A;  1HXK A;  4JNE A;  3T46 A;  4IM0 A;  3KAW A;  3HAH A;  4E81 A;  4JWD A;  2LXY A;  3D2E A;  2MI7 A;  2EX3 B;  1QX1 A;  4IWO A;  4R5K A;  3B53 X;  1WDZ A;  1E9V A;  1Y2O A;  4EZT A;  4FZS A;  3BUP A;  3SYV A;  3KAV A;  3CZN A;  3DX3 A;  2O0I 1;  4E3C A;  3ER8 C;  3BVX A;  3T48 A;  4EZZ A;  4KIK A;  4EZY A;  3T4A G;  2WYH A;  3T47 A;  2OBM A;  2JNK A;  3Q0K A;  2F7P A;  4JL9 A;  4IWQ A;  4DYL A;  2OO2 A;  2RAI A;  2ALW A;  3HAI A;  3VEA A;  1TQS A;  2GF4 A;  2OW7 A;  2Z0N A;  2Z0V A;  2N3K A;  2JNS A;  2D1L A;  2F7R A;  3QWE A;  4EZU A;  1QWN A;  3EJU A;  3QNI A;  1O7D B;  3ACO A;  2OW6 A;  4AZB A;  2RT6 A;  3LLL A;  3M3W A;  4JWI A;  3DYT A;  1TQT A;  1DKX A;  1R33 A;  3EJP A;  2FYV A;  1TQU A;  1GNT A;  3O3M B;  3DPP A;  3B51 X;  2OZN B;  4EZR A;  3VEB A;  1DKZ A;  2QFF A;  2ND1 A;  2KHO A;  1UPX A;  1ZYL A;  4PO2 A;  4UDY X;  4WPC A;  4JN4 A;  4G6Q A;  3O3N B;  4AZH A;  4AVM A;  4EZN A;  3PLT A;  1URU A;  3D4Z A;  1ZWW A;  2YL9 A;  3DDF A;  3D51 A;  4AZC B;  2PMR A;  4FM3 A;  2F7O A;  2QKW A;  2NCZ A;  1X04 A;  4JWE A;  5C5B B;  3ER9 B;  2YL5 A;  4EZX A;  4AZ7 A;  1TQV A;  2V0O A;  3BUD A;  2X3W A;  2F7Q A;  3DX1 A;  4B9Q A;  1X03 A;  4IM2 A;  1OA0 A;  2LM0 A;  3SOG A;  3UIT A;  1I4D A;  3C7N A;  4AZI A;  3BUB A;  3ERC C;  3EJQ A;  3ZED A;  1QWU A;  1SUF A;  3CKD A;  4R5L A;  1DKY A;  4NSW A;  4HYB A;  2GA9 D;  2GAF D;  4H8S A;  4IW0 A;  4F00 A;  4FZO A;  3LMF A;  4HR1 B;  4IWP A;  2EFL A;  2X5C A;  2X3X A;  2ELB A;  4D8J A;  2ZXQ A;  1TQW A;  3A98 A;  4EZP A;  5KBP A;  3BVV A;  3O3O B;  2C08 A;  4R5I A;  2WYI A;  2YL6 A;  2RAJ A;  3DPO A;  3B52 X;  3BUI A; 
#chains in the Genus database with same CATH homology
 4E3C A;  2YI9 A;  4PO2 A;  4UDY X;  2YIB A;  1SU8 A;  4EZQ A;  3ER8 C;  4JN4 A;  3OHX M;  3T48 A;  2OBL A;  3RV1 A;  4EZZ A;  3FD9 A;  1JQK A;  4JWC A;  4KIK A;  4EZY A;  4H6I A;  4G6Q A;  3O3N B;  4EZS A;  4JNF A;  3T4A G;  4EZN A;  1MJG A;  3KDR A;  2PY6 A;  3T47 A;  4IM3 A;  1E1D A;  5TKY A;  2OBM A;  1SU6 A;  3GI7 A;  4NPH A;  4F01 A;  4JL9 A;  2YIA A;  4FM3 A;  3VKH A;  4IWQ A;  2NCZ A;  2EWF A;  5E84 A;  1ZYL A;  1GNL A;  4JWE A;  2Z8Y A;  4R5G A;  4EZV A;  3ER9 B;  2YI8 A;  4EZX A;  4JLC A;  3VEA A;  4HR1 A;  5FLE X;  2N3K A;  2JNS A;  4KIK B;  1GN9 A;  3D2F A;  3QA8 A;  4B9Q A;  4IM2 A;  1OA0 A;  2LM0 A;  3OWG A;  4EZU A;  3I01 A;  4H6H A;  3QNJ A;  2QXL A;  1E2U A;  3DPQ A;  3L3O M;  3UIT A;  3C7N A;  3I04 A;  4EZO A;  2ND0 A;  3ERC C;  1SU7 A;  3ZED A;  2YIV X;  1SUF A;  2RT6 A;  4R5L A;  1DKY A;  1U00 A;  3I39 X;  4HYB A;  1OA1 A;  3RV0 A;  4UDX X;  2GA9 D;  4JNE A;  1W9M A;  4JWI A;  2GAF D;  3T46 A;  4IM0 A;  4IW0 A;  3T49 A;  4F00 A;  3LMF A;  3KAW A;  4HR1 B;  4IWP A;  4M0M A;  2X5C A;  1DKX A;  4HY9 A;  1OAO A;  4E81 A;  4JWD A;  3D2E A;  3F7W A;  2EX3 B;  4D8J A;  4IWO A;  4R5K A;  1GNT A;  3B53 X;  3O3M B;  3A98 A;  3DPP A;  1E9V A;  3B51 X;  4EZP A;  5FIG A;  4EZT A;  4EZR A;  3O3O B;  3VEB A;  1DKZ A;  4R5I A;  2QFF A;  3DPO A;  4EZW A;  2ND1 A;  3KAV A;  1UPX A;  4R5J A;  3B52 X;  2KHO A;  2WIN M; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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