2V0OA

Fcho2 f-bar domain
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
273
structure length
273
Chain Sequence
b'PMAYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTGKERPGLIEFEECD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords FCH DOMAIN ONLY PROTEIN 2
publication title Structure and Analysis of Fcho2 F-Bar Domain: A Dimerizing and Membrane Recruitment Module that Effects Membrane Curvature.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Lipid binding protein
total genus 117
structure length 273
sequence length 273
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00611 FCH Fes/CIP4, and EFC/F-BAR homology domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 2v0oA00
2Z0VA 1X03A 4NSWA 2V0OA 4DCNC 2EFLA 2RAKA 2Q13A 4WPCA 2D4CA 2X3WA 1Y2OA 3QNIA 2FICA 5C5BA 1URUA 1I49A 4AVMA 4H8SA 4BNEA 2X3VA 3QWEA 1I4DA 1ZWWA 1I4TA 3Q0KA 4NQIA 3SYVA 3G9GA 2EFKA 4ATMA 4WPEA 1X04A 3HAHA 5C5BB 3SOGA 2C08A 2D1LA 3HAIA 1I4LA 3LLLA 2X3XA 3ACOA 1WDZA 2Z0NA 3HAJA 4I1QA 4DYLA 2RAJA 2YKTA 3OK8A 2ELBA 3Q84A 2Q12A 3DYTA 3QE6A 4AKVA 3PLTA 3ABHA 3CAZA 2RAIA 3M3WA 4FZSA 3I2WA 2Z0OA
chains in the Genus database with same CATH superfamily
4HY9A 4HR1B 3LMFA 2ALWA 4JWEA 5FIGA 3QWEA 4EZVA 3SYVA 2GAFD 3HAJA 4HYBA 2YLLA 2YL8A 4FZSA 3C7NA 2N3KA 1R5EA 3KAWA 3GI7A 1Y2OA 1QWUA 3ZEDA 4R5GA 4EZQA 2ND0A 4PO2A 1I4TA 4EZPA 4JL9A 4HR1A 3DX4A 2OBMA 1OA1A 3I39X 4R5KA 2GA9D 3PLTA 3DPQA 1SU6A 2Q13A 3CVRA 3BUPA 3B51X 2F1AA 3D51A 4AVMA 2JNKA 2WYHA 2D1LA 1DKXA 3ACOA 2YL5A 2RAJA 1E2UA 2YL6A 2ELBA 4EZUA 3ERCC 4EZOA 3CV5A 4NSWA 2RAKA 3DX0A 4WPCA 3I01A 4KIKB 4IM3A 3O3OB 4EZTA 3Q0KA 2F7RA 4EZRA 2EFKA 3BVWA 1X04A 3B53X 3EJQA 3CKDA 4EZWA 3BUBA 4EZNA 3F7WA 3EJSA 3EJUA 1UPXA 3I04A 2O0I1 4KIKA 1WDZA 2Z0NA 1SU8A 3BVUA 3Q84A 2Q12A 1W9MA 4AZIA 2Z0OA 2V0OA 1GNLA 2YLAA 4F00A 4NQIA 2OBLA 3G9GA 4ATMA 3QNJA 1GN9A 1E9VA 4D8JA 2RAIA 4H6IA 2LXYA 1TQTA 4DCNC 2EFLA 2ND1A 1URUA 1TQWA 2PMRA 4FM3A 4F01A 2F7PA 2F7OA 4AZHA 4AZCB 1U00A 4AZ5A 3LLLA 1JQKA 3QNIA 4EZYA 3RPMA 2OW7A 3L3OM 3EJRA 2YL9A 1I4LA 4R5LA 1PS3A 4E81A 3DX2A 3T47A 3O3NB 1ZYLA 2YIAA 4AZCA 2MI7A 3D4ZA 4JWDA 1HWWA 4IWPA 1R33A 3EJPA 3DX1A 3DPOA 4WPEA 3D2FA 1R34A 3VEAA 2WYIA 1TQUA 1OAOA 3T4AG 3QE6A 2X5CA 2KHOA 5KBPA 3M3WA 3I2WA 2YI9A 2JNSA 3OWGA 4FZOA 2X3VA 3FD9A 4R5IA 3BUQA 2OZNB 3D4YA 2EWFA 3CZNA 2D4CA 2X3WA 4IM0A 1HTYA 2NCZA 1DKZA 2YI8A 2OW6A 3T48A 2C08A 1LQ7A 4H6HA 3BUDA 2WINM 5FLEX 1TQSA 3QA8A 4R5JA 1OA0A 4JWIA 4JN4A 4H8SA 2QFFA 1HXKA 3D2EA 4AZ6A 3DDGA 3D52A 4UDYX 1MJGA 3BVVA 3OHXM 1E1DA 2FYVA 3D50A 2F1BA 4DYLA 2RT6A 2YKTA 3OK8A 1TQVA 4JNEA 3KDRA 3BUIA 3CAZA 3A98A 2Z0VA 4NPHA 3DDFA 4IWOA 4B9QA 3DX3A 1I49A 2QKWA 3RV1A 1DKYA 4IM2A 4G6QA 4JNFA 3O3MB 5C5BB 2LM0A 2X3XA 3T49A 2PY6A 3L3PA 4EZSA 5TKYA 4AZGA 1QWNA 1X03A 2F7QA 3T46A 3B52X 4E3CA 2FICA 3BVTA 4IW0A 3BLBA 1I4DA 2EX3B 1O7DB 3RV0A 4AZBA 1QX1A 3HAHA 3DPPA 4FZPA 3SOGA 3CZSA 2YIBA 2ZXQA 4AKVA 2GF4A 1GNTA 3UITA 5C5BA 3LVTA 4EZZA 3VKHA 2QXLA 3VEBA 1SUFA 4BNEA 2OO2A 4UDXX 4JLCA 1O7DC 3ER9B 1YWMA 3HAIA 2YIVX 4I1QA 4EZXA 3BVXA 4JWCA 2Z8YA 3KAVA 1ZWWA 2F18A 1SU7A 4IWQA 3EJTA 4M0MA 3ER8C 3DYTA 5E84A 3ABHA 4AZ7A
chains in the Genus database with same CATH topology
2Z0VA 1X03A 4NSWA 2V0OA 4DCNC 2EFLA 2RAKA 2Q13A 4WPCA 2D4CA 2X3WA 1Y2OA 3QNIA 2FICA 5C5BA 1URUA 1I49A 4AVMA 4H8SA 4BNEA 2X3VA 3QWEA 1I4DA 1ZWWA 1I4TA 3Q0KA 4NQIA 3SYVA 3G9GA 2EFKA 4ATMA 4WPEA 1X04A 3HAHA 5C5BB 3SOGA 2C08A 2D1LA 3HAIA 1I4LA 3LLLA 2X3XA 3ACOA 1WDZA 2Z0NA 3HAJA 4I1QA 4DYLA 2RAJA 2YKTA 3OK8A 2ELBA 3Q84A 2Q12A 3DYTA 3QE6A 4AKVA 3PLTA 3ABHA 3CAZA 2RAIA 3M3WA 4FZSA 3I2WA 2Z0OA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Z0V A;  1X03 A;  4NSW A;  2V0O A;  4DCN C;  2EFL A;  2RAK A;  2Q13 A;  4WPC A;  2D4C A;  2X3W A;  1Y2O A;  3QNI A;  2FIC A;  5C5B A;  1URU A;  1I49 A;  4AVM A;  4H8S A;  4BNE A;  2X3V A;  3QWE A;  1I4D A;  1ZWW A;  1I4T A;  3Q0K A;  4NQI A;  3SYV A;  3G9G A;  2EFK A;  4ATM A;  4WPE A;  1X04 A;  3HAH A;  5C5B B;  3SOG A;  2C08 A;  2D1L A;  3HAI A;  1I4L A;  3LLL A;  2X3X A;  3ACO A;  1WDZ A;  2Z0N A;  3HAJ A;  4I1Q A;  4DYL A;  2RAJ A;  2YKT A;  3OK8 A;  2ELB A;  3Q84 A;  2Q12 A;  3DYT A;  3QE6 A;  4AKV A;  3PLT A;  3ABH A;  3CAZ A;  2RAI A;  3M3W A;  4FZS A;  3I2W A;  2Z0O A; 
#chains in the Genus database with same CATH topology
 4HY9 A;  4HR1 B;  3LMF A;  2ALW A;  4JWE A;  5FIG A;  3QWE A;  4EZV A;  3SYV A;  2GAF D;  3HAJ A;  4HYB A;  2YLL A;  2YL8 A;  4FZS A;  3C7N A;  2N3K A;  1R5E A;  3KAW A;  3GI7 A;  1Y2O A;  1QWU A;  3ZED A;  4R5G A;  4EZQ A;  2ND0 A;  4PO2 A;  1I4T A;  4EZP A;  4JL9 A;  4HR1 A;  3DX4 A;  2OBM A;  1OA1 A;  3I39 X;  4R5K A;  2GA9 D;  3PLT A;  3DPQ A;  1SU6 A;  2Q13 A;  3CVR A;  3BUP A;  3B51 X;  2F1A A;  3D51 A;  4AVM A;  2JNK A;  2WYH A;  2D1L A;  1DKX A;  3ACO A;  2YL5 A;  2RAJ A;  1E2U A;  2YL6 A;  2ELB A;  4EZU A;  3ERC C;  4EZO A;  3CV5 A;  4NSW A;  2RAK A;  3DX0 A;  4WPC A;  3I01 A;  4KIK B;  4IM3 A;  3O3O B;  4EZT A;  3Q0K A;  2F7R A;  4EZR A;  2EFK A;  3BVW A;  1X04 A;  3B53 X;  3EJQ A;  3CKD A;  4EZW A;  3BUB A;  4EZN A;  3F7W A;  3EJS A;  3EJU A;  1UPX A;  3I04 A;  2O0I 1;  4KIK A;  1WDZ A;  2Z0N A;  1SU8 A;  3BVU A;  3Q84 A;  2Q12 A;  1W9M A;  4AZI A;  2Z0O A;  2V0O A;  1GNL A;  2YLA A;  4F00 A;  4NQI A;  2OBL A;  3G9G A;  4ATM A;  3QNJ A;  1GN9 A;  1E9V A;  4D8J A;  2RAI A;  4H6I A;  2LXY A;  1TQT A;  4DCN C;  2EFL A;  2ND1 A;  1URU A;  1TQW A;  2PMR A;  4FM3 A;  4F01 A;  2F7P A;  2F7O A;  4AZH A;  4AZC B;  1U00 A;  4AZ5 A;  3LLL A;  1JQK A;  3QNI A;  4EZY A;  3RPM A;  2OW7 A;  3L3O M;  3EJR A;  2YL9 A;  1I4L A;  4R5L A;  1PS3 A;  4E81 A;  3DX2 A;  3T47 A;  3O3N B;  1ZYL A;  2YIA A;  4AZC A;  2MI7 A;  3D4Z A;  4JWD A;  1HWW A;  4IWP A;  1R33 A;  3EJP A;  3DX1 A;  3DPO A;  4WPE A;  3D2F A;  1R34 A;  3VEA A;  2WYI A;  1TQU A;  1OAO A;  3T4A G;  3QE6 A;  2X5C A;  2KHO A;  5KBP A;  3M3W A;  3I2W A;  2YI9 A;  2JNS A;  3OWG A;  4FZO A;  2X3V A;  3FD9 A;  4R5I A;  3BUQ A;  2OZN B;  3D4Y A;  2EWF A;  3CZN A;  2D4C A;  2X3W A;  4IM0 A;  1HTY A;  2NCZ A;  1DKZ A;  2YI8 A;  2OW6 A;  3T48 A;  2C08 A;  1LQ7 A;  4H6H A;  3BUD A;  2WIN M;  5FLE X;  1TQS A;  3QA8 A;  4R5J A;  1OA0 A;  4JWI A;  4JN4 A;  4H8S A;  2QFF A;  1HXK A;  3D2E A;  4AZ6 A;  3DDG A;  3D52 A;  4UDY X;  1MJG A;  3BVV A;  3OHX M;  1E1D A;  2FYV A;  3D50 A;  2F1B A;  4DYL A;  2RT6 A;  2YKT A;  3OK8 A;  1TQV A;  4JNE A;  3KDR A;  3BUI A;  3CAZ A;  3A98 A;  2Z0V A;  4NPH A;  3DDF A;  4IWO A;  4B9Q A;  3DX3 A;  1I49 A;  2QKW A;  3RV1 A;  1DKY A;  4IM2 A;  4G6Q A;  4JNF A;  3O3M B;  5C5B B;  2LM0 A;  2X3X A;  3T49 A;  2PY6 A;  3L3P A;  4EZS A;  5TKY A;  4AZG A;  1QWN A;  1X03 A;  2F7Q A;  3T46 A;  3B52 X;  4E3C A;  2FIC A;  3BVT A;  4IW0 A;  3BLB A;  1I4D A;  2EX3 B;  1O7D B;  3RV0 A;  4AZB A;  1QX1 A;  3HAH A;  3DPP A;  4FZP A;  3SOG A;  3CZS A;  2YIB A;  2ZXQ A;  4AKV A;  2GF4 A;  1GNT A;  3UIT A;  5C5B A;  3LVT A;  4EZZ A;  3VKH A;  2QXL A;  3VEB A;  1SUF A;  4BNE A;  2OO2 A;  4UDX X;  4JLC A;  1O7D C;  3ER9 B;  1YWM A;  3HAI A;  2YIV X;  4I1Q A;  4EZX A;  3BVX A;  4JWC A;  2Z8Y A;  3KAV A;  1ZWW A;  2F18 A;  1SU7 A;  4IWQ A;  3EJT A;  4M0M A;  3ER8 C;  3DYT A;  5E84 A;  3ABH A;  4AZ7 A; 
#chains in the Genus database with same CATH homology
 2Z0V A;  1X03 A;  4NSW A;  2V0O A;  4DCN C;  2EFL A;  2RAK A;  2Q13 A;  4WPC A;  2D4C A;  2X3W A;  1Y2O A;  3QNI A;  2FIC A;  5C5B A;  1URU A;  1I49 A;  4AVM A;  4H8S A;  4BNE A;  2X3V A;  3QWE A;  1I4D A;  1ZWW A;  1I4T A;  3Q0K A;  4NQI A;  3SYV A;  3G9G A;  2EFK A;  4ATM A;  4WPE A;  1X04 A;  3HAH A;  5C5B B;  3SOG A;  2C08 A;  2D1L A;  3HAI A;  1I4L A;  3LLL A;  2X3X A;  3ACO A;  1WDZ A;  2Z0N A;  3HAJ A;  4I1Q A;  4DYL A;  2RAJ A;  2YKT A;  3OK8 A;  2ELB A;  3Q84 A;  2Q12 A;  3DYT A;  3QE6 A;  4AKV A;  3PLT A;  3ABH A;  3CAZ A;  2RAI A;  3M3W A;  4FZS A;  3I2W A;  2Z0O A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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