2V0OA

Fcho2 f-bar domain
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
273
structure length
273
Chain Sequence
PMAYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTGKERPGLIEFEECD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords FCH DOMAIN ONLY PROTEIN 2
publication title Structure and Analysis of Fcho2 F-Bar Domain: A Dimerizing and Membrane Recruitment Module that Effects Membrane Curvature.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Lipid binding protein
total genus 117
structure length 273
sequence length 273
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00611 FCH Fes/CIP4, and EFC/F-BAR homology domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 2v0oA00
4WPEA 2RAKA 5C5BB 2D1LA 1X04A 2EFKA 1ZWWA 1I49A 2C08A 1X03A 2D4CA 2RAJA 2V0OA 2X3XA 2Z0NA 3QNIA 3PLTA 3ABHA 3Q0KA 3M3WA 4WPCA 2FICA 2Z0VA 3SYVA 2ELBA 4FZSA 3HAIA 3OK8A 3QE6A 4I1QA 3SOGA 1WDZA 2X3VA 3HAHA 2X3WA 3I2WA 3LLLA 4ATMA 5C5BA 1I4TA 2EFLA 3DYTA 3Q84A 4NQIA 4DCNC 2Q13A 2Z0OA 3ACOA 3QWEA 3G9GA 4H8SA 3CAZA 4NSWA 3HAJA 4AKVA 4BNEA 2RAIA 4AVMA 1Y2OA 1I4DA 2YKTA 4DYLA 1URUA 2Q12A 1I4LA
chains in the Genus database with same CATH superfamily
2N3KA 3DDFA 3DPOA 3BVVA 2F18A 3DPQA 4FM3A 2OBMA 1GN9A 2YI8A 4ATMA 4IM2A 5C5BA 3BUBA 4BNEA 4IW0A 2QXLA 5E84A 1Y2OA 3ZEDA 2Q12A 4JN4A 4WPEA 2D4CA 2F1BA 1W9MA 3ABHA 1HWWA 3GI7A 3EJPA 2ALWA 1JQKA 3DX4A 3ER8C 1TQUA 3CZSA 1HXKA 4EZTA 1E9VA 2EFLA 3EJSA 3G9GA 1TQSA 2OZNB 4AZHA 1ZYLA 4H6IA 4WPCA 3FD9A 3D52A 3DX2A 3OK8A 2GF4A 4E81A 3HAHA 3D2FA 2GAFD 2YL5A 4D8JA 2OBLA 3EJQA 1DKZA 2EFKA 3BUQA 2X3XA 2YL9A 3BLBA 1SUFA 3ER9B 2JNSA 4H6HA 1WDZA 3LMFA 4EZUA 1I4TA 3QWEA 4AVMA 4AZ6A 3L3PA 3RV1A 1TQTA 3D50A 2Z0NA 4JLCA 3BVTA 3T46A 1SU7A 2F7OA 2ELBA 3T49A 4EZWA 3BVUA 1R34A 4I1QA 4EZSA 4H8SA 4NSWA 2Z8YA 1DKXA 4PO2A 1GNTA 1I49A 1OA1A 4UDYX 3D4ZA 3PLTA 1E1DA 3B53X 4IM3A 1QWNA 4IM0A 4R5GA 1DKYA 5KBPA 3EJTA 3BVXA 5TKYA 1U00A 3RPMA 3I04A 4EZXA 3DX1A 5C5BB 2YL6A 2RAJA 2YLLA 3EJUA 3DPPA 4EZZA 4G6QA 4NQIA 3ACOA 4HR1A 4KIKA 2OW7A 2YI9A 4HR1B 4R5IA 4HYBA 2RT6A 2WYIA 4E3CA 2FICA 4KIKB 3C7NA 3BUDA 1OAOA 2KHOA 2QKWA 3LLLA 3VEAA 3DYTA 4AZCA 4JNEA 2OW6A 4EZVA 2RAKA 4AZCB 1R5EA 2YIBA 3ERCC 3M3WA 4FZPA 3CZNA 1O7DC 3DX3A 3B51X 2X3VA 4IWOA 3I2WA 2WYHA 1R33A 4JWIA 3DDGA 2QFFA 2D1LA 3OWGA 2LXYA 3OHXM 3O3OB 2WINM 1GNLA 1LQ7A 1OA0A 2Z0VA 3KDRA 4HY9A 1SU6A 4R5JA 1E2UA 1HTYA 2EX3B 3QA8A 4DYLA 2PY6A 1X03A 4AZBA 3B52X 2LM0A 1TQVA 4JWDA 1YWMA 3SYVA 4R5KA 2FYVA 2YIAA 2Q13A 4JNFA 4EZQA 4EZRA 1I4LA 3I01A 4AZ7A 3D2EA 3RV0A 4NPHA 4F00A 3HAIA 5FLEX 3QE6A 1O7DB 3D51A 3T48A 4JWEA 2Z0OA 3D4YA 3CAZA 3HAJA 4EZNA 3QNJA 3BUIA 2V0OA 3T47A 2X5CA 3Q0KA 2F7RA 3EJRA 4FZOA 3DX0A 4UDXX 3SOGA 2GA9D 3L3OM 3UITA 3KAVA 4AZ5A 2OO2A 2YIVX 4IWPA 3CKDA 4IWQA 2C08A 1MJGA 4FZSA 3BVWA 4AZIA 3A98A 3F7WA 2O0I1 3O3MB 4JL9A 3LVTA 2F1AA 3VKHA 3O3NB 4AKVA 3KAWA 1UPXA 2YL8A 4F01A 2RAIA 1X04A 1ZWWA 3VEBA 2ZXQA 2ND1A 4EZYA 2JNKA 5FIGA 2MI7A 1QWUA 3I39X 2X3WA 4EZPA 3Q84A 4DCNC 4M0MA 4EZOA 2NCZA 4R5LA 4B9QA 4AZGA 3QNIA 2PMRA 3CV5A 2F7QA 2F7PA 3CVRA 1QX1A 2YLAA 2EWFA 2ND0A 3T4AG 1PS3A 1TQWA 3BUPA 4JWCA 1SU8A 1I4DA 2YKTA 1URUA
chains in the Genus database with same CATH topology
4WPEA 2RAKA 5C5BB 2D1LA 1X04A 2EFKA 1ZWWA 1I49A 2C08A 1X03A 2D4CA 2RAJA 2V0OA 2X3XA 2Z0NA 3QNIA 3PLTA 3ABHA 3Q0KA 3M3WA 4WPCA 2FICA 2Z0VA 3SYVA 2ELBA 4FZSA 3HAIA 3OK8A 3QE6A 4I1QA 3SOGA 1WDZA 2X3VA 3HAHA 2X3WA 3I2WA 3LLLA 4ATMA 5C5BA 1I4TA 2EFLA 3DYTA 3Q84A 4NQIA 4DCNC 2Q13A 2Z0OA 3ACOA 3QWEA 3G9GA 4H8SA 3CAZA 4NSWA 3HAJA 4AKVA 4BNEA 2RAIA 4AVMA 1Y2OA 1I4DA 2YKTA 4DYLA 1URUA 2Q12A 1I4LA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4WPE A;  2RAK A;  5C5B B;  2D1L A;  1X04 A;  2EFK A;  1ZWW A;  1I49 A;  2C08 A;  1X03 A;  2D4C A;  2RAJ A;  2V0O A;  2X3X A;  2Z0N A;  3QNI A;  3PLT A;  3ABH A;  3Q0K A;  3M3W A;  4WPC A;  2FIC A;  2Z0V A;  3SYV A;  2ELB A;  4FZS A;  3HAI A;  3OK8 A;  3QE6 A;  4I1Q A;  3SOG A;  1WDZ A;  2X3V A;  3HAH A;  2X3W A;  3I2W A;  3LLL A;  4ATM A;  5C5B A;  1I4T A;  2EFL A;  3DYT A;  3Q84 A;  4NQI A;  4DCN C;  2Q13 A;  2Z0O A;  3ACO A;  3QWE A;  3G9G A;  4H8S A;  3CAZ A;  4NSW A;  3HAJ A;  4AKV A;  4BNE A;  2RAI A;  4AVM A;  1Y2O A;  1I4D A;  2YKT A;  4DYL A;  1URU A;  2Q12 A;  1I4L A; 
#chains in the Genus database with same CATH topology
 2N3K A;  3DDF A;  3DPO A;  3BVV A;  2F18 A;  3DPQ A;  4FM3 A;  2OBM A;  1GN9 A;  2YI8 A;  4ATM A;  4IM2 A;  5C5B A;  3BUB A;  4BNE A;  4IW0 A;  2QXL A;  5E84 A;  1Y2O A;  3ZED A;  2Q12 A;  4JN4 A;  4WPE A;  2D4C A;  2F1B A;  1W9M A;  3ABH A;  1HWW A;  3GI7 A;  3EJP A;  2ALW A;  1JQK A;  3DX4 A;  3ER8 C;  1TQU A;  3CZS A;  1HXK A;  4EZT A;  1E9V A;  2EFL A;  3EJS A;  3G9G A;  1TQS A;  2OZN B;  4AZH A;  1ZYL A;  4H6I A;  4WPC A;  3FD9 A;  3D52 A;  3DX2 A;  3OK8 A;  2GF4 A;  4E81 A;  3HAH A;  3D2F A;  2GAF D;  2YL5 A;  4D8J A;  2OBL A;  3EJQ A;  1DKZ A;  2EFK A;  3BUQ A;  2X3X A;  2YL9 A;  3BLB A;  1SUF A;  3ER9 B;  2JNS A;  4H6H A;  1WDZ A;  3LMF A;  4EZU A;  1I4T A;  3QWE A;  4AVM A;  4AZ6 A;  3L3P A;  3RV1 A;  1TQT A;  3D50 A;  2Z0N A;  4JLC A;  3BVT A;  3T46 A;  1SU7 A;  2F7O A;  2ELB A;  3T49 A;  4EZW A;  3BVU A;  1R34 A;  4I1Q A;  4EZS A;  4H8S A;  4NSW A;  2Z8Y A;  1DKX A;  4PO2 A;  1GNT A;  1I49 A;  1OA1 A;  4UDY X;  3D4Z A;  3PLT A;  1E1D A;  3B53 X;  4IM3 A;  1QWN A;  4IM0 A;  4R5G A;  1DKY A;  5KBP A;  3EJT A;  3BVX A;  5TKY A;  1U00 A;  3RPM A;  3I04 A;  4EZX A;  3DX1 A;  5C5B B;  2YL6 A;  2RAJ A;  2YLL A;  3EJU A;  3DPP A;  4EZZ A;  4G6Q A;  4NQI A;  3ACO A;  4HR1 A;  4KIK A;  2OW7 A;  2YI9 A;  4HR1 B;  4R5I A;  4HYB A;  2RT6 A;  2WYI A;  4E3C A;  2FIC A;  4KIK B;  3C7N A;  3BUD A;  1OAO A;  2KHO A;  2QKW A;  3LLL A;  3VEA A;  3DYT A;  4AZC A;  4JNE A;  2OW6 A;  4EZV A;  2RAK A;  4AZC B;  1R5E A;  2YIB A;  3ERC C;  3M3W A;  4FZP A;  3CZN A;  1O7D C;  3DX3 A;  3B51 X;  2X3V A;  4IWO A;  3I2W A;  2WYH A;  1R33 A;  4JWI A;  3DDG A;  2QFF A;  2D1L A;  3OWG A;  2LXY A;  3OHX M;  3O3O B;  2WIN M;  1GNL A;  1LQ7 A;  1OA0 A;  2Z0V A;  3KDR A;  4HY9 A;  1SU6 A;  4R5J A;  1E2U A;  1HTY A;  2EX3 B;  3QA8 A;  4DYL A;  2PY6 A;  1X03 A;  4AZB A;  3B52 X;  2LM0 A;  1TQV A;  4JWD A;  1YWM A;  3SYV A;  4R5K A;  2FYV A;  2YIA A;  2Q13 A;  4JNF A;  4EZQ A;  4EZR A;  1I4L A;  3I01 A;  4AZ7 A;  3D2E A;  3RV0 A;  4NPH A;  4F00 A;  3HAI A;  5FLE X;  3QE6 A;  1O7D B;  3D51 A;  3T48 A;  4JWE A;  2Z0O A;  3D4Y A;  3CAZ A;  3HAJ A;  4EZN A;  3QNJ A;  3BUI A;  2V0O A;  3T47 A;  2X5C A;  3Q0K A;  2F7R A;  3EJR A;  4FZO A;  3DX0 A;  4UDX X;  3SOG A;  2GA9 D;  3L3O M;  3UIT A;  3KAV A;  4AZ5 A;  2OO2 A;  2YIV X;  4IWP A;  3CKD A;  4IWQ A;  2C08 A;  1MJG A;  4FZS A;  3BVW A;  4AZI A;  3A98 A;  3F7W A;  2O0I 1;  3O3M B;  4JL9 A;  3LVT A;  2F1A A;  3VKH A;  3O3N B;  4AKV A;  3KAW A;  1UPX A;  2YL8 A;  4F01 A;  2RAI A;  1X04 A;  1ZWW A;  3VEB A;  2ZXQ A;  2ND1 A;  4EZY A;  2JNK A;  5FIG A;  2MI7 A;  1QWU A;  3I39 X;  2X3W A;  4EZP A;  3Q84 A;  4DCN C;  4M0M A;  4EZO A;  2NCZ A;  4R5L A;  4B9Q A;  4AZG A;  3QNI A;  2PMR A;  3CV5 A;  2F7Q A;  2F7P A;  3CVR A;  1QX1 A;  2YLA A;  2EWF A;  2ND0 A;  3T4A G;  1PS3 A;  1TQW A;  3BUP A;  4JWC A;  1SU8 A;  1I4D A;  2YKT A;  1URU A; 
#chains in the Genus database with same CATH homology
 4WPE A;  2RAK A;  5C5B B;  2D1L A;  1X04 A;  2EFK A;  1ZWW A;  1I49 A;  2C08 A;  1X03 A;  2D4C A;  2RAJ A;  2V0O A;  2X3X A;  2Z0N A;  3QNI A;  3PLT A;  3ABH A;  3Q0K A;  3M3W A;  4WPC A;  2FIC A;  2Z0V A;  3SYV A;  2ELB A;  4FZS A;  3HAI A;  3OK8 A;  3QE6 A;  4I1Q A;  3SOG A;  1WDZ A;  2X3V A;  3HAH A;  2X3W A;  3I2W A;  3LLL A;  4ATM A;  5C5B A;  1I4T A;  2EFL A;  3DYT A;  3Q84 A;  4NQI A;  4DCN C;  2Q13 A;  2Z0O A;  3ACO A;  3QWE A;  3G9G A;  4H8S A;  3CAZ A;  4NSW A;  3HAJ A;  4AKV A;  4BNE A;  2RAI A;  4AVM A;  1Y2O A;  1I4D A;  2YKT A;  4DYL A;  1URU A;  2Q12 A;  1I4L A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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