2V0OA

Fcho2 f-bar domain
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
273
structure length
273
Chain Sequence
PMAYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTGKERPGLIEFEECD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lipid binding protein
molecule keywords FCH DOMAIN ONLY PROTEIN 2
publication title Structure and Analysis of Fcho2 F-Bar Domain: A Dimerizing and Membrane Recruitment Module that Effects Membrane Curvature.
pubmed doi rcsb
source organism Homo sapiens
total genus 117
structure length 273
sequence length 273
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00611 FCH Fes/CIP4, and EFC/F-BAR homology domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 2v0oA00
1X03A 2D1LA 1URUA 3ACOA 3Q84A 2V0OA 3CAZA 3DYTA 2Z0VA 3OK8A 3Q0KA 3SOGA 4DYLA 2FICA 2RAJA 5C5BA 3PLTA 3G9GA 4ATMA 2C08A 2X3WA 2YKTA 3HAIA 3M3WA 3QE6A 2X3VA 4AVMA 3SYVA 2Z0NA 5C5BB 4AKVA 4WPEA 4NSWA 4H8SA 2Q12A 1I4LA 2RAIA 3HAHA 4NQIA 3QWEA 3LLLA 2EFLA 2Z0OA 1I49A 2RAKA 1X04A 1I4DA 2Q13A 2ELBA 3ABHA 4I1QA 4WPCA 2EFKA 3I2WA 4FZSA 2X3XA 3QNIA 4DCNC 1Y2OA 4BNEA 3HAJA 1I4TA 1ZWWA 2D4CA 1WDZA
chains in the Genus database with same CATH superfamily
2D1LA 4H6IA 1PS3A 3DPPA 3DX0A 3T4AG 2EWFA 3GI7A 3C7NA 3ABHA 3OWGA 4FM3A 3L3OM 3BVUA 3I2WA 2F7RA 4E81A 1OA1A 3BVVA 3LLLA 2X5CA 3CZNA 4AZCB 2EFKA 4JWEA 4EZZA 2ZXQA 2F7OA 2YL8A 2YI8A 5FLEX 4E3CA 3DYTA 2YLLA 2OO2A 1TQUA 2Z8YA 4JL9A 3M3WA 4AZ5A 4AZCA 2N3KA 1R33A 1TQTA 4B9QA 1ZYLA 1HTYA 4EZNA 3OK8A 3CV5A 3Q0KA 4R5GA 2FICA 1O7DC 3EJPA 2Z0NA 3DX2A 3LMFA 3KAVA 2RAKA 4JNFA 2LXYA 3D51A 2YL6A 3FD9A 3DX1A 1TQSA 4DYLA 1R5EA 3HAIA 4EZWA 3D2FA 2X3VA 2QFFA 4IWOA 3EJSA 4WPEA 2YL9A 2WINM 1DKZA 1HXKA 1TQWA 1GN9A 3ER8C 3DDFA 4JLCA 3VKHA 3O3NB 2PY6A 4ATMA 2C08A 2YLAA 3DPOA 4EZOA 4H8SA 2QXLA 4IWQA 2JNKA 1SU6A 3QNJA 2MI7A 4F00A 2Q13A 3BUIA 2FYVA 2OW6A 3BVTA 3B53X 4DCNC 1O7DB 2F7PA 3RV0A 2OBLA 1WDZA 5E84A 3O3OB 2PMRA 4AZGA 1OA0A 4EZPA 2OW7A 2WYIA 2F7QA 1HWWA 3ZEDA 2YI9A 2LM0A 3OHXM 3CKDA 3D52A 4AZBA 4AZHA 1URUA 3BLBA 3SOGA 4M0MA 1E2UA 4IM0A 4PO2A 4NSWA 2ND0A 4UDXX 4H6HA 3EJQA 4R5IA 2ELBA 4WPCA 3BUDA 4JWIA 3HAJA 3BVWA 3T49A 3Q84A 3T47A 1UPXA 2OZNB 2GA9D 2YIAA 2GAFD 4AZ6A 1E9VA 4EZXA 3A98A 1I4DA 4I1QA 1R34A 3B51X 1LQ7A 4G6QA 1DKXA 3EJTA 1QWNA 2RT6A 4EZYA 4EZVA 2KHOA 4AVMA 4HYBA 2QKWA 4EZSA 2X3XA 3QNIA 4IM3A 2F1BA 2NCZA 3BVXA 1GNLA 4EZQA 1E1DA 3QA8A 3RV1A 2GF4A 3G9GA 3D4YA 3BUPA 4AKVA 3EJRA 3D4ZA 4EZRA 3QWEA 3VEBA 2Z0OA 2ND1A 3LVTA 1I49A 3L3PA 1W9MA 4JN4A 1OAOA 1DKYA 4D8JA 4EZTA 1SU7A 2YIVX 4KIKB 3T48A 3D2EA 3UITA 3KDRA 4NPHA 2OBMA 1SU8A 4R5KA 4AZIA 1Y2OA 3EJUA 4BNEA 4KIKA 4F01A 3I01A 3O3MB 2X3WA 4R5LA 3T46A 3RPMA 3ERCC 5TKYA 3SYVA 1I4LA 2JNSA 1YWMA 3HAHA 4NQIA 2EFLA 3DX3A 4IM2A 1SUFA 4JWCA 3BUQA 3BUBA 1X03A 2V0OA 2ALWA 4FZPA 2YKTA 4EZUA 4IWPA 3CZSA 3KAWA 5C5BB 3DDGA 2RAIA 2WYHA 4IW0A 1X04A 2F1AA 1TQVA 3VEAA 2YIBA 1ZWWA 2EX3B 3B52X 5C5BA 2RAJA 3PLTA 5KBPA 4JNEA 1GNTA 2F18A 4AZ7A 3CVRA 1JQKA 4FZOA 3DX4A 4JWDA 5FIGA 4FZSA 1QWUA 3DPQA 3D50A 2YL5A 1U00A 4HR1B 4UDYX 3ACOA 3CAZA 4HY9A 2Z0VA 1MJGA 3F7WA 3I39X 4R5JA 3I04A 3QE6A 3ER9B 2Q12A 2O0I1 4HR1A 1QX1A 1I4TA 2D4CA
chains in the Genus database with same CATH topology
1X03A 2D1LA 1URUA 3ACOA 3Q84A 2V0OA 3CAZA 3DYTA 2Z0VA 3OK8A 3Q0KA 3SOGA 4DYLA 2FICA 2RAJA 5C5BA 3PLTA 3G9GA 4ATMA 2C08A 2X3WA 2YKTA 3HAIA 3M3WA 3QE6A 2X3VA 4AVMA 3SYVA 2Z0NA 5C5BB 4AKVA 4WPEA 4NSWA 4H8SA 2Q12A 1I4LA 2RAIA 3HAHA 4NQIA 3QWEA 3LLLA 2EFLA 2Z0OA 1I49A 2RAKA 1X04A 1I4DA 2Q13A 2ELBA 3ABHA 4I1QA 4WPCA 2EFKA 3I2WA 4FZSA 2X3XA 3QNIA 4DCNC 1Y2OA 4BNEA 3HAJA 1I4TA 1ZWWA 2D4CA 1WDZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1X03 A;  2D1L A;  1URU A;  3ACO A;  3Q84 A;  2V0O A;  3CAZ A;  3DYT A;  2Z0V A;  3OK8 A;  3Q0K A;  3SOG A;  4DYL A;  2FIC A;  2RAJ A;  5C5B A;  3PLT A;  3G9G A;  4ATM A;  2C08 A;  2X3W A;  2YKT A;  3HAI A;  3M3W A;  3QE6 A;  2X3V A;  4AVM A;  3SYV A;  2Z0N A;  5C5B B;  4AKV A;  4WPE A;  4NSW A;  4H8S A;  2Q12 A;  1I4L A;  2RAI A;  3HAH A;  4NQI A;  3QWE A;  3LLL A;  2EFL A;  2Z0O A;  1I49 A;  2RAK A;  1X04 A;  1I4D A;  2Q13 A;  2ELB A;  3ABH A;  4I1Q A;  4WPC A;  2EFK A;  3I2W A;  4FZS A;  2X3X A;  3QNI A;  4DCN C;  1Y2O A;  4BNE A;  3HAJ A;  1I4T A;  1ZWW A;  2D4C A;  1WDZ A; 
#chains in the Genus database with same CATH topology
 2D1L A;  4H6I A;  1PS3 A;  3DPP A;  3DX0 A;  3T4A G;  2EWF A;  3GI7 A;  3C7N A;  3ABH A;  3OWG A;  4FM3 A;  3L3O M;  3BVU A;  3I2W A;  2F7R A;  4E81 A;  1OA1 A;  3BVV A;  3LLL A;  2X5C A;  3CZN A;  4AZC B;  2EFK A;  4JWE A;  4EZZ A;  2ZXQ A;  2F7O A;  2YL8 A;  2YI8 A;  5FLE X;  4E3C A;  3DYT A;  2YLL A;  2OO2 A;  1TQU A;  2Z8Y A;  4JL9 A;  3M3W A;  4AZ5 A;  4AZC A;  2N3K A;  1R33 A;  1TQT A;  4B9Q A;  1ZYL A;  1HTY A;  4EZN A;  3OK8 A;  3CV5 A;  3Q0K A;  4R5G A;  2FIC A;  1O7D C;  3EJP A;  2Z0N A;  3DX2 A;  3LMF A;  3KAV A;  2RAK A;  4JNF A;  2LXY A;  3D51 A;  2YL6 A;  3FD9 A;  3DX1 A;  1TQS A;  4DYL A;  1R5E A;  3HAI A;  4EZW A;  3D2F A;  2X3V A;  2QFF A;  4IWO A;  3EJS A;  4WPE A;  2YL9 A;  2WIN M;  1DKZ A;  1HXK A;  1TQW A;  1GN9 A;  3ER8 C;  3DDF A;  4JLC A;  3VKH A;  3O3N B;  2PY6 A;  4ATM A;  2C08 A;  2YLA A;  3DPO A;  4EZO A;  4H8S A;  2QXL A;  4IWQ A;  2JNK A;  1SU6 A;  3QNJ A;  2MI7 A;  4F00 A;  2Q13 A;  3BUI A;  2FYV A;  2OW6 A;  3BVT A;  3B53 X;  4DCN C;  1O7D B;  2F7P A;  3RV0 A;  2OBL A;  1WDZ A;  5E84 A;  3O3O B;  2PMR A;  4AZG A;  1OA0 A;  4EZP A;  2OW7 A;  2WYI A;  2F7Q A;  1HWW A;  3ZED A;  2YI9 A;  2LM0 A;  3OHX M;  3CKD A;  3D52 A;  4AZB A;  4AZH A;  1URU A;  3BLB A;  3SOG A;  4M0M A;  1E2U A;  4IM0 A;  4PO2 A;  4NSW A;  2ND0 A;  4UDX X;  4H6H A;  3EJQ A;  4R5I A;  2ELB A;  4WPC A;  3BUD A;  4JWI A;  3HAJ A;  3BVW A;  3T49 A;  3Q84 A;  3T47 A;  1UPX A;  2OZN B;  2GA9 D;  2YIA A;  2GAF D;  4AZ6 A;  1E9V A;  4EZX A;  3A98 A;  1I4D A;  4I1Q A;  1R34 A;  3B51 X;  1LQ7 A;  4G6Q A;  1DKX A;  3EJT A;  1QWN A;  2RT6 A;  4EZY A;  4EZV A;  2KHO A;  4AVM A;  4HYB A;  2QKW A;  4EZS A;  2X3X A;  3QNI A;  4IM3 A;  2F1B A;  2NCZ A;  3BVX A;  1GNL A;  4EZQ A;  1E1D A;  3QA8 A;  3RV1 A;  2GF4 A;  3G9G A;  3D4Y A;  3BUP A;  4AKV A;  3EJR A;  3D4Z A;  4EZR A;  3QWE A;  3VEB A;  2Z0O A;  2ND1 A;  3LVT A;  1I49 A;  3L3P A;  1W9M A;  4JN4 A;  1OAO A;  1DKY A;  4D8J A;  4EZT A;  1SU7 A;  2YIV X;  4KIK B;  3T48 A;  3D2E A;  3UIT A;  3KDR A;  4NPH A;  2OBM A;  1SU8 A;  4R5K A;  4AZI A;  1Y2O A;  3EJU A;  4BNE A;  4KIK A;  4F01 A;  3I01 A;  3O3M B;  2X3W A;  4R5L A;  3T46 A;  3RPM A;  3ERC C;  5TKY A;  3SYV A;  1I4L A;  2JNS A;  1YWM A;  3HAH A;  4NQI A;  2EFL A;  3DX3 A;  4IM2 A;  1SUF A;  4JWC A;  3BUQ A;  3BUB A;  1X03 A;  2V0O A;  2ALW A;  4FZP A;  2YKT A;  4EZU A;  4IWP A;  3CZS A;  3KAW A;  5C5B B;  3DDG A;  2RAI A;  2WYH A;  4IW0 A;  1X04 A;  2F1A A;  1TQV A;  3VEA A;  2YIB A;  1ZWW A;  2EX3 B;  3B52 X;  5C5B A;  2RAJ A;  3PLT A;  5KBP A;  4JNE A;  1GNT A;  2F18 A;  4AZ7 A;  3CVR A;  1JQK A;  4FZO A;  3DX4 A;  4JWD A;  5FIG A;  4FZS A;  1QWU A;  3DPQ A;  3D50 A;  2YL5 A;  1U00 A;  4HR1 B;  4UDY X;  3ACO A;  3CAZ A;  4HY9 A;  2Z0V A;  1MJG A;  3F7W A;  3I39 X;  4R5J A;  3I04 A;  3QE6 A;  3ER9 B;  2Q12 A;  2O0I 1;  4HR1 A;  1QX1 A;  1I4T A;  2D4C A; 
#chains in the Genus database with same CATH homology
 1X03 A;  2D1L A;  1URU A;  3ACO A;  3Q84 A;  2V0O A;  3CAZ A;  3DYT A;  2Z0V A;  3OK8 A;  3Q0K A;  3SOG A;  4DYL A;  2FIC A;  2RAJ A;  5C5B A;  3PLT A;  3G9G A;  4ATM A;  2C08 A;  2X3W A;  2YKT A;  3HAI A;  3M3W A;  3QE6 A;  2X3V A;  4AVM A;  3SYV A;  2Z0N A;  5C5B B;  4AKV A;  4WPE A;  4NSW A;  4H8S A;  2Q12 A;  1I4L A;  2RAI A;  3HAH A;  4NQI A;  3QWE A;  3LLL A;  2EFL A;  2Z0O A;  1I49 A;  2RAK A;  1X04 A;  1I4D A;  2Q13 A;  2ELB A;  3ABH A;  4I1Q A;  4WPC A;  2EFK A;  3I2W A;  4FZS A;  2X3X A;  3QNI A;  4DCN C;  1Y2O A;  4BNE A;  3HAJ A;  1I4T A;  1ZWW A;  2D4C A;  1WDZ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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