2V0OA

Fcho2 f-bar domain
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
273
structure length
273
Chain Sequence
PMAYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTGKERPGLIEFEECD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords FCH DOMAIN ONLY PROTEIN 2
publication title Structure and Analysis of Fcho2 F-Bar Domain: A Dimerizing and Membrane Recruitment Module that Effects Membrane Curvature.
pubmed doi rcsb
source organism Homo sapiens
molecule tags Lipid binding protein
total genus 117
structure length 273
sequence length 273
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00611 FCH Fes/CIP4, and EFC/F-BAR homology domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 2v0oA00
3CAZA 3I2WA 3QE6A 3Q84A 2V0OA 3G9GA 2RAKA 1URUA 1X04A 3DYTA 3LLLA 5C5BB 4DCNC 1I49A 4NQIA 4WPEA 3SYVA 5C5BA 2EFKA 2Z0NA 2RAJA 3HAJA 3M3WA 2X3VA 1ZWWA 3HAHA 3SOGA 4I1QA 2D4CA 1X03A 2Z0OA 3PLTA 2Z0VA 2C08A 2EFLA 1I4DA 4NSWA 4WPCA 2Q12A 1Y2OA 2Q13A 3QNIA 4FZSA 4H8SA 4DYLA 2X3WA 1WDZA 3ACOA 4AKVA 3OK8A 3Q0KA 4ATMA 4AVMA 4BNEA 1I4TA 3HAIA 2FICA 2D1LA 2RAIA 1I4LA 3ABHA 2YKTA 2ELBA 3QWEA 2X3XA
chains in the Genus database with same CATH superfamily
3T4AG 3I2WA 2YL9A 3DX4A 4KIKA 2OBMA 1QWNA 1PS3A 3OHXM 3PLTA 1TQSA 1OAOA 4UDYX 3DX3A 3QNIA 1U00A 2EX3B 3O3NB 1I4LA 3QWEA 1HTYA 4HR1B 1OA1A 3CAZA 4IM3A 1SU7A 2ND1A 3Q84A 1DKZA 5FLEX 4R5KA 4EZXA 3CZSA 3SYVA 4HYBA 2Z0VA 1MJGA 3QA8A 4JL9A 4PO2A 3DPOA 4JNEA 2EWFA 4AZCB 4EZWA 2MI7A 1HXKA 3BUPA 1R34A 1HWWA 1QWUA 2OBLA 1I4DA 2ND0A 3BVUA 3BUQA 5E84A 1X04A 3VEBA 2YI9A 4AZIA 1UPXA 2JNSA 1SU8A 2YIAA 4I1QA 4JWCA 2F7PA 4EZQA 1QX1A 3GI7A 3BUDA 1TQVA 2Q13A 1E1DA 4AZHA 4D8JA 4HY9A 4BNEA 3OWGA 2QKWA 4E81A 4AZBA 5C5BB 2PY6A 3D2EA 4IWQA 3BVWA 4EZVA 2YIBA 2Q12A 1Y2OA 3LMFA 4F00A 2QXLA 3OK8A 3EJSA 4FZOA 3F7WA 3D4ZA 2OZNB 3D50A 3FD9A 4E3CA 1YWMA 2Z0NA 2QFFA 1GNTA 2KHOA 3ZEDA 3BUIA 3L3OM 4DYLA 3KAWA 4R5JA 3Q0KA 4AVMA 4AZ6A 4H6HA 3CV5A 3ABHA 2YKTA 3KAVA 3CVRA 2YL6A 4B9QA 4JWIA 3ERCC 2F1BA 3DPPA 1E9VA 2EFLA 3B52X 1GN9A 2ALWA 2YI8A 1E2UA 4IW0A 4JLCA 4JWDA 4UDXX 2WINM 3D52A 4EZOA 3RV1A 2ZXQA 2LM0A 3D51A 1X03A 4JNFA 4NSWA 1TQTA 3BVVA 2F7RA 3B53X 1WDZA 3ACOA 1R5EA 2FICA 4JWEA 3EJQA 4KIKB 4IM2A 1DKXA 4FM3A 3HAJA 2O0I1 2YL8A 3EJPA 2F7OA 3SOGA 2GF4A 1LQ7A 2OO2A 3BVTA 5TKYA 2ELBA 4R5GA 4HR1A 1OA0A 3T46A 4EZRA 4IWOA 1URUA 4IM0A 4EZSA 2OW7A 3T47A 3M3WA 1GNLA 3BUBA 4EZPA 2D4CA 2N3KA 3A98A 3B51X 3C7NA 4H8SA 3LVTA 4AKVA 1SUFA 4AZCA 3DX2A 4NPHA 4IWPA 2GAFD 3LLLA 4DCNC 2F18A 2Z0OA 2YL5A 4FZSA 3UITA 1O7DB 4M0MA 3DX0A 4AZ7A 3DPQA 1O7DC 2FYVA 3KDRA 1TQWA 2LXYA 4EZYA 3DYTA 4EZUA 2F1AA 3DDFA 3L3PA 2WYIA 3EJTA 2OW6A 1JQKA 2X3WA 4EZTA 5FIGA 2Z8YA 3I04A 4R5IA 4AZGA 3I39X 2X5CA 3BLBA 3O3MB 4WPEA 5C5BA 3EJUA 3BVXA 1ZWWA 1R33A 3HAHA 3O3OB 3T48A 3CZNA 2YLLA 3RPMA 3D2FA 3ER9B 2NCZA 3HAIA 4JN4A 2GA9D 4EZNA 2X3XA 3QE6A 3EJRA 3ER8C 2RAKA 3VKHA 1TQUA 2YLAA 2C08A 3DX1A 1I4TA 4AZ5A 4FZPA 2V0OA 4F01A 3G9GA 1I49A 4NQIA 4R5LA 2EFKA 2RAJA 2X3VA 3CKDA 2YIVX 3I01A 1DKYA 3D4YA 4WPCA 4G6QA 4ATMA 3T49A 1W9MA 1ZYLA 3QNJA 2F7QA 4H6IA 2JNKA 1SU6A 3RV0A 5KBPA 2WYHA 4EZZA 3VEAA 2RT6A 3DDGA 2D1LA 2RAIA 2PMRA
chains in the Genus database with same CATH topology
3CAZA 3I2WA 3QE6A 3Q84A 2V0OA 3G9GA 2RAKA 1URUA 1X04A 3DYTA 3LLLA 5C5BB 4DCNC 1I49A 4NQIA 4WPEA 3SYVA 5C5BA 2EFKA 2Z0NA 2RAJA 3HAJA 3M3WA 2X3VA 1ZWWA 3HAHA 3SOGA 4I1QA 2D4CA 1X03A 2Z0OA 3PLTA 2Z0VA 2C08A 2EFLA 1I4DA 4NSWA 4WPCA 2Q12A 1Y2OA 2Q13A 3QNIA 4FZSA 4H8SA 4DYLA 2X3WA 1WDZA 3ACOA 4AKVA 3OK8A 3Q0KA 4ATMA 4AVMA 4BNEA 1I4TA 3HAIA 2FICA 2D1LA 2RAIA 1I4LA 3ABHA 2YKTA 2ELBA 3QWEA 2X3XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3CAZ A;  3I2W A;  3QE6 A;  3Q84 A;  2V0O A;  3G9G A;  2RAK A;  1URU A;  1X04 A;  3DYT A;  3LLL A;  5C5B B;  4DCN C;  1I49 A;  4NQI A;  4WPE A;  3SYV A;  5C5B A;  2EFK A;  2Z0N A;  2RAJ A;  3HAJ A;  3M3W A;  2X3V A;  1ZWW A;  3HAH A;  3SOG A;  4I1Q A;  2D4C A;  1X03 A;  2Z0O A;  3PLT A;  2Z0V A;  2C08 A;  2EFL A;  1I4D A;  4NSW A;  4WPC A;  2Q12 A;  1Y2O A;  2Q13 A;  3QNI A;  4FZS A;  4H8S A;  4DYL A;  2X3W A;  1WDZ A;  3ACO A;  4AKV A;  3OK8 A;  3Q0K A;  4ATM A;  4AVM A;  4BNE A;  1I4T A;  3HAI A;  2FIC A;  2D1L A;  2RAI A;  1I4L A;  3ABH A;  2YKT A;  2ELB A;  3QWE A;  2X3X A; 
#chains in the Genus database with same CATH topology
 3T4A G;  3I2W A;  2YL9 A;  3DX4 A;  4KIK A;  2OBM A;  1QWN A;  1PS3 A;  3OHX M;  3PLT A;  1TQS A;  1OAO A;  4UDY X;  3DX3 A;  3QNI A;  1U00 A;  2EX3 B;  3O3N B;  1I4L A;  3QWE A;  1HTY A;  4HR1 B;  1OA1 A;  3CAZ A;  4IM3 A;  1SU7 A;  2ND1 A;  3Q84 A;  1DKZ A;  5FLE X;  4R5K A;  4EZX A;  3CZS A;  3SYV A;  4HYB A;  2Z0V A;  1MJG A;  3QA8 A;  4JL9 A;  4PO2 A;  3DPO A;  4JNE A;  2EWF A;  4AZC B;  4EZW A;  2MI7 A;  1HXK A;  3BUP A;  1R34 A;  1HWW A;  1QWU A;  2OBL A;  1I4D A;  2ND0 A;  3BVU A;  3BUQ A;  5E84 A;  1X04 A;  3VEB A;  2YI9 A;  4AZI A;  1UPX A;  2JNS A;  1SU8 A;  2YIA A;  4I1Q A;  4JWC A;  2F7P A;  4EZQ A;  1QX1 A;  3GI7 A;  3BUD A;  1TQV A;  2Q13 A;  1E1D A;  4AZH A;  4D8J A;  4HY9 A;  4BNE A;  3OWG A;  2QKW A;  4E81 A;  4AZB A;  5C5B B;  2PY6 A;  3D2E A;  4IWQ A;  3BVW A;  4EZV A;  2YIB A;  2Q12 A;  1Y2O A;  3LMF A;  4F00 A;  2QXL A;  3OK8 A;  3EJS A;  4FZO A;  3F7W A;  3D4Z A;  2OZN B;  3D50 A;  3FD9 A;  4E3C A;  1YWM A;  2Z0N A;  2QFF A;  1GNT A;  2KHO A;  3ZED A;  3BUI A;  3L3O M;  4DYL A;  3KAW A;  4R5J A;  3Q0K A;  4AVM A;  4AZ6 A;  4H6H A;  3CV5 A;  3ABH A;  2YKT A;  3KAV A;  3CVR A;  2YL6 A;  4B9Q A;  4JWI A;  3ERC C;  2F1B A;  3DPP A;  1E9V A;  2EFL A;  3B52 X;  1GN9 A;  2ALW A;  2YI8 A;  1E2U A;  4IW0 A;  4JLC A;  4JWD A;  4UDX X;  2WIN M;  3D52 A;  4EZO A;  3RV1 A;  2ZXQ A;  2LM0 A;  3D51 A;  1X03 A;  4JNF A;  4NSW A;  1TQT A;  3BVV A;  2F7R A;  3B53 X;  1WDZ A;  3ACO A;  1R5E A;  2FIC A;  4JWE A;  3EJQ A;  4KIK B;  4IM2 A;  1DKX A;  4FM3 A;  3HAJ A;  2O0I 1;  2YL8 A;  3EJP A;  2F7O A;  3SOG A;  2GF4 A;  1LQ7 A;  2OO2 A;  3BVT A;  5TKY A;  2ELB A;  4R5G A;  4HR1 A;  1OA0 A;  3T46 A;  4EZR A;  4IWO A;  1URU A;  4IM0 A;  4EZS A;  2OW7 A;  3T47 A;  3M3W A;  1GNL A;  3BUB A;  4EZP A;  2D4C A;  2N3K A;  3A98 A;  3B51 X;  3C7N A;  4H8S A;  3LVT A;  4AKV A;  1SUF A;  4AZC A;  3DX2 A;  4NPH A;  4IWP A;  2GAF D;  3LLL A;  4DCN C;  2F18 A;  2Z0O A;  2YL5 A;  4FZS A;  3UIT A;  1O7D B;  4M0M A;  3DX0 A;  4AZ7 A;  3DPQ A;  1O7D C;  2FYV A;  3KDR A;  1TQW A;  2LXY A;  4EZY A;  3DYT A;  4EZU A;  2F1A A;  3DDF A;  3L3P A;  2WYI A;  3EJT A;  2OW6 A;  1JQK A;  2X3W A;  4EZT A;  5FIG A;  2Z8Y A;  3I04 A;  4R5I A;  4AZG A;  3I39 X;  2X5C A;  3BLB A;  3O3M B;  4WPE A;  5C5B A;  3EJU A;  3BVX A;  1ZWW A;  1R33 A;  3HAH A;  3O3O B;  3T48 A;  3CZN A;  2YLL A;  3RPM A;  3D2F A;  3ER9 B;  2NCZ A;  3HAI A;  4JN4 A;  2GA9 D;  4EZN A;  2X3X A;  3QE6 A;  3EJR A;  3ER8 C;  2RAK A;  3VKH A;  1TQU A;  2YLA A;  2C08 A;  3DX1 A;  1I4T A;  4AZ5 A;  4FZP A;  2V0O A;  4F01 A;  3G9G A;  1I49 A;  4NQI A;  4R5L A;  2EFK A;  2RAJ A;  2X3V A;  3CKD A;  2YIV X;  3I01 A;  1DKY A;  3D4Y A;  4WPC A;  4G6Q A;  4ATM A;  3T49 A;  1W9M A;  1ZYL A;  3QNJ A;  2F7Q A;  4H6I A;  2JNK A;  1SU6 A;  3RV0 A;  5KBP A;  2WYH A;  4EZZ A;  3VEA A;  2RT6 A;  3DDG A;  2D1L A;  2RAI A;  2PMR A; 
#chains in the Genus database with same CATH homology
 3CAZ A;  3I2W A;  3QE6 A;  3Q84 A;  2V0O A;  3G9G A;  2RAK A;  1URU A;  1X04 A;  3DYT A;  3LLL A;  5C5B B;  4DCN C;  1I49 A;  4NQI A;  4WPE A;  3SYV A;  5C5B A;  2EFK A;  2Z0N A;  2RAJ A;  3HAJ A;  3M3W A;  2X3V A;  1ZWW A;  3HAH A;  3SOG A;  4I1Q A;  2D4C A;  1X03 A;  2Z0O A;  3PLT A;  2Z0V A;  2C08 A;  2EFL A;  1I4D A;  4NSW A;  4WPC A;  2Q12 A;  1Y2O A;  2Q13 A;  3QNI A;  4FZS A;  4H8S A;  4DYL A;  2X3W A;  1WDZ A;  3ACO A;  4AKV A;  3OK8 A;  3Q0K A;  4ATM A;  4AVM A;  4BNE A;  1I4T A;  3HAI A;  2FIC A;  2D1L A;  2RAI A;  1I4L A;  3ABH A;  2YKT A;  2ELB A;  3QWE A;  2X3X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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