4H6IA

Crystal structure of staphylococcal complement inhibitor scin-b
Total Genus 25
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
25
sequence length
77
structure length
77
Chain Sequence
ESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Fibrinogen-binding protein
publication title A Structurally Dynamic N-terminal Helix Is a Key Functional Determinant in Staphylococcal Complement Inhibitor (SCIN) Proteins.
pubmed doi rcsb
source organism Staphylococcus aureus subsp. aureus
total genus 25
structure length 77
sequence length 77
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2012-09-19
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.10 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Substrate Binding Domain Of Dnak; Chain:A; Domain 2 4h6iA00
4JWDA 3DPQA 3DPOA 3T4AG 4H6IA 4JNEA 4H6HA 4JWCA 3T47A 2QFFA 4EZXA 4EZRA 4JWEA 4JWIA 4R5JA 4HYBA 3C7NA 4PO2A 1DKYA 4JN4A 4R5KA 3L3OM 4EZSA 4EZZA 4EZNA 1DKZA 4EZTA 4R5GA 2QXLA 1U00A 3D2FA 4EZOA 3T48A 3T46A 4F00A 3T49A 5TKYA 4EZQA 3D2EA 3QNJA 5E84A 1DKXA 2KHOA 4EZVA 3OHXM 4EZWA 3DPPA 4JNFA 4F01A 4EZPA 4EZYA 4R5LA 4E81A 4EZUA 4HY9A 2WINM 4B9QA 4R5IA
chains in the Genus database with same CATH superfamily
2YI8A 2FICA 2V0OA 4JWEA 2YL6A 3BUIA 3CVRA 1TQTA 1GNTA 3BVUA 4IWPA 4EZVA 1MJGA 4F01A 2LM0A 4R5LA 3CAZA 3ACOA 3O3NB 4G6QA 3DPQA 3L3PA 3C7NA 2JNSA 4M0MA 3I04A 4AZIA 1HTYA 3B51X 4KIKB 3B53X 2QXLA 4HR1A 3I2WA 3D52A 2WINM 3EJRA 4JNEA 1X03A 1QWUA 4IM0A 4AZ5A 4EZSA 3L3OM 4EZZA 3BVXA 4EZOA 3T48A 1I4DA 3T49A 3HAHA 1SU6A 3QNJA 4JL9A 2YL5A 3VEBA 1URUA 1W9MA 3RPMA 1E1DA 4D8JA 5C5BA 3DYTA 4HYBA 2OW7A 4AVMA 3BUPA 1X04A 3KAVA 1DKZA 3VKHA 1TQVA 4IM3A 2PMRA 5TKYA 3UITA 4UDXX 3DX2A 3BVTA 3GI7A 3G9GA 4EZUA 2ND1A 4NPHA 1LQ7A 3FD9A 3OK8A 3O3MB 4NQIA 2NCZA 4AZHA 1WDZA 4EZPA 5FIGA 4AZCB 1PS3A 1I4LA 3M3WA 3DDFA 3D4ZA 4R5KA 3PLTA 2EFKA 4AZ7A 4AZGA 5E84A 2KHOA 2OZNB 3DPPA 2YLAA 4HY9A 2YKTA 3D51A 2ND0A 4H6IA 2QFFA 3F7WA 4EZTA 3SYVA 3ERCC 1QWNA 2YI9A 3RV1A 3VEAA 1SU7A 3BUBA 3OHXM 2GA9D 4R5IA 1QX1A 3OWGA 2LXYA 4EZXA 3HAJA 1O7DB 2O0I1 2F1AA 2WYHA 2RAIA 1ZYLA 3A98A 2X3XA 3DX0A 3DX1A 1JQKA 2FYVA 2D4CA 4JWDA 3CV5A 2Z0OA 3Q0KA 3Q84A 3I39X 3EJTA 3ER9B 3B52X 3BLBA 2PY6A 1OA0A 2GAFD 3D4YA 1GN9A 4HR1B 3DPOA 3T4AG 2X3WA 4EZRA 3HAIA 5FLEX 1I4TA 2F7QA 1HXKA 4FM3A 4I1QA 3DX4A 3SOGA 3BVWA 3I01A 1DKXA 1UPXA 4NSWA 3BUQA 4JNFA 4DYLA 4KIKA 4JLCA 4UDYX 3KDRA 4ATMA 4FZSA 4PO2A 2YIBA 4IM2A 3QWEA 1O7DC 2ELBA 1TQWA 1R34A 5C5BB 2X5CA 3D50A 3T46A 1YWMA 4AZBA 3O3OB 2JNKA 5KBPA 1R33A 2QKWA 4E3CA 3BVVA 1SU8A 2D1LA 3T47A 2OBMA 3ER8C 2Z8YA 2EWFA 2EX3B 4JN4A 2YL8A 3QNIA 2Z0VA 2YL9A 2OBLA 2F7PA 4R5GA 3CKDA 1I49A 4EZQA 3ABHA 1E9VA 2Q12A 2ZXQA 1E2UA 4E81A 2WYIA 2N3KA 4H6HA 4JWCA 4IWQA 1SUFA 1OAOA 1DKYA 3LLLA 2EFLA 3RV0A 3CZNA 2F7OA 1Y2OA 2F18A 4WPCA 1OA1A 4H8SA 3DX3A 3LMFA 4AKVA 2OW6A 2Z0NA 4R5JA 2YIVX 1TQUA 2X3VA 3KAWA 3BUDA 4EZNA 3QE6A 1R5EA 2OO2A 2C08A 2Q13A 3DDGA 3D2FA 4WPEA 4AZCA 2RAKA 4BNEA 4IWOA 4EZWA 4EZYA 2F1BA 2YLLA 4JWIA 4FZPA 2RT6A 3EJSA 2ALWA 3ZEDA 2YIAA 4FZOA 3EJUA 2GF4A 4DCNC 4IW0A 4B9QA 2RAJA 4AZ6A 1TQSA 3LVTA 1GNLA 1HWWA 3EJQA 1ZWWA 2F7RA 3EJPA 1U00A 3CZSA 4F00A 3D2EA 3QA8A 2MI7A
chains in the Genus database with same CATH topology
2ND1A 2YI8A 4JWDA 2N3KA 4NPHA 4H6HA 4JWCA 4IWQA 4JWEA 1SUFA 1OAOA 3I39X 1DKYA 3ER9B 3B52X 2PY6A 1OA0A 3FD9A 3O3MB 3RV0A 2NCZA 1GNTA 1OA1A 2GAFD 4IWPA 4EZVA 3LMFA 1MJGA 4F01A 2LM0A 1GN9A 4EZPA 5FIGA 4R5LA 4HR1B 3O3NB 4G6QA 3DPQA 3DPOA 3T4AG 4EZRA 5FLEX 4R5JA 3C7NA 2JNSA 2YIVX 4M0MA 4R5KA 3KAWA 4EZNA 3I04A 3B51X 4FM3A 4KIKB 3B53X 2QXLA 3D2FA 4HR1A 3I01A 5E84A 1DKXA 1UPXA 2KHOA 4IWOA 4EZWA 3DPPA 4JNFA 4EZYA 4HY9A 2WINM 2ND0A 4KIKA 4JLCA 4H6IA 4JNEA 2QFFA 3F7WA 4UDYX 3KDRA 4JWIA 4IM0A 4PO2A 2YIBA 4IM2A 4EZSA 3L3OM 4EZZA 4EZTA 2X5CA 3ERCC 2RT6A 4EZOA 3T48A 3T46A 3T49A 1SU6A 2YI9A 3RV1A 3QNJA 3O3OB 3ZEDA 3VEAA 1SU7A 2YIAA 4JL9A 3OHXM 3VEBA 1W9MA 4E3CA 1E1DA 2GA9D 4IW0A 4R5IA 4B9QA 3OWGA 4D8JA 1SU8A 4EZXA 3T47A 2OBMA 3ER8C 4HYBA 2Z8YA 2EWFA 2EX3B 4JN4A 1GNLA 3KAVA 1DKZA 2OBLA 3VKHA 4R5GA 1U00A 4IM3A 1ZYLA 4F00A 5TKYA 3UITA 4EZQA 3A98A 3D2EA 1E9VA 4UDXX 3GI7A 1E2UA 4E81A 4EZUA 1JQKA 3QA8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JWD A;  3DPQ A;  3DPO A;  3T4A G;  4H6I A;  4JNE A;  4H6H A;  4JWC A;  3T47 A;  2QFF A;  4EZX A;  4EZR A;  4JWE A;  4JWI A;  4R5J A;  4HYB A;  3C7N A;  4PO2 A;  1DKY A;  4JN4 A;  4R5K A;  3L3O M;  4EZS A;  4EZZ A;  4EZN A;  1DKZ A;  4EZT A;  4R5G A;  2QXL A;  1U00 A;  3D2F A;  4EZO A;  3T48 A;  3T46 A;  4F00 A;  3T49 A;  5TKY A;  4EZQ A;  3D2E A;  3QNJ A;  5E84 A;  1DKX A;  2KHO A;  4EZV A;  3OHX M;  4EZW A;  3DPP A;  4JNF A;  4F01 A;  4EZP A;  4EZY A;  4R5L A;  4E81 A;  4EZU A;  4HY9 A;  2WIN M;  4B9Q A;  4R5I A; 
#chains in the Genus database with same CATH topology
 2YI8 A;  2FIC A;  2V0O A;  4JWE A;  2YL6 A;  3BUI A;  3CVR A;  1TQT A;  1GNT A;  3BVU A;  4IWP A;  4EZV A;  1MJG A;  4F01 A;  2LM0 A;  4R5L A;  3CAZ A;  3ACO A;  3O3N B;  4G6Q A;  3DPQ A;  3L3P A;  3C7N A;  2JNS A;  4M0M A;  3I04 A;  4AZI A;  1HTY A;  3B51 X;  4KIK B;  3B53 X;  2QXL A;  4HR1 A;  3I2W A;  3D52 A;  2WIN M;  3EJR A;  4JNE A;  1X03 A;  1QWU A;  4IM0 A;  4AZ5 A;  4EZS A;  3L3O M;  4EZZ A;  3BVX A;  4EZO A;  3T48 A;  1I4D A;  3T49 A;  3HAH A;  1SU6 A;  3QNJ A;  4JL9 A;  2YL5 A;  3VEB A;  1URU A;  1W9M A;  3RPM A;  1E1D A;  4D8J A;  5C5B A;  3DYT A;  4HYB A;  2OW7 A;  4AVM A;  3BUP A;  1X04 A;  3KAV A;  1DKZ A;  3VKH A;  1TQV A;  4IM3 A;  2PMR A;  5TKY A;  3UIT A;  4UDX X;  3DX2 A;  3BVT A;  3GI7 A;  3G9G A;  4EZU A;  2ND1 A;  4NPH A;  1LQ7 A;  3FD9 A;  3OK8 A;  3O3M B;  4NQI A;  2NCZ A;  4AZH A;  1WDZ A;  4EZP A;  5FIG A;  4AZC B;  1PS3 A;  1I4L A;  3M3W A;  3DDF A;  3D4Z A;  4R5K A;  3PLT A;  2EFK A;  4AZ7 A;  4AZG A;  5E84 A;  2KHO A;  2OZN B;  3DPP A;  2YLA A;  4HY9 A;  2YKT A;  3D51 A;  2ND0 A;  4H6I A;  2QFF A;  3F7W A;  4EZT A;  3SYV A;  3ERC C;  1QWN A;  2YI9 A;  3RV1 A;  3VEA A;  1SU7 A;  3BUB A;  3OHX M;  2GA9 D;  4R5I A;  1QX1 A;  3OWG A;  2LXY A;  4EZX A;  3HAJ A;  1O7D B;  2O0I 1;  2F1A A;  2WYH A;  2RAI A;  1ZYL A;  3A98 A;  2X3X A;  3DX0 A;  3DX1 A;  1JQK A;  2FYV A;  2D4C A;  4JWD A;  3CV5 A;  2Z0O A;  3Q0K A;  3Q84 A;  3I39 X;  3EJT A;  3ER9 B;  3B52 X;  3BLB A;  2PY6 A;  1OA0 A;  2GAF D;  3D4Y A;  1GN9 A;  4HR1 B;  3DPO A;  3T4A G;  2X3W A;  4EZR A;  3HAI A;  5FLE X;  1I4T A;  2F7Q A;  1HXK A;  4FM3 A;  4I1Q A;  3DX4 A;  3SOG A;  3BVW A;  3I01 A;  1DKX A;  1UPX A;  4NSW A;  3BUQ A;  4JNF A;  4DYL A;  4KIK A;  4JLC A;  4UDY X;  3KDR A;  4ATM A;  4FZS A;  4PO2 A;  2YIB A;  4IM2 A;  3QWE A;  1O7D C;  2ELB A;  1TQW A;  1R34 A;  5C5B B;  2X5C A;  3D50 A;  3T46 A;  1YWM A;  4AZB A;  3O3O B;  2JNK A;  5KBP A;  1R33 A;  2QKW A;  4E3C A;  3BVV A;  1SU8 A;  2D1L A;  3T47 A;  2OBM A;  3ER8 C;  2Z8Y A;  2EWF A;  2EX3 B;  4JN4 A;  2YL8 A;  3QNI A;  2Z0V A;  2YL9 A;  2OBL A;  2F7P A;  4R5G A;  3CKD A;  1I49 A;  4EZQ A;  3ABH A;  1E9V A;  2Q12 A;  2ZXQ A;  1E2U A;  4E81 A;  2WYI A;  2N3K A;  4H6H A;  4JWC A;  4IWQ A;  1SUF A;  1OAO A;  1DKY A;  3LLL A;  2EFL A;  3RV0 A;  3CZN A;  2F7O A;  1Y2O A;  2F18 A;  4WPC A;  1OA1 A;  4H8S A;  3DX3 A;  3LMF A;  4AKV A;  2OW6 A;  2Z0N A;  4R5J A;  2YIV X;  1TQU A;  2X3V A;  3KAW A;  3BUD A;  4EZN A;  3QE6 A;  1R5E A;  2OO2 A;  2C08 A;  2Q13 A;  3DDG A;  3D2F A;  4WPE A;  4AZC A;  2RAK A;  4BNE A;  4IWO A;  4EZW A;  4EZY A;  2F1B A;  2YLL A;  4JWI A;  4FZP A;  2RT6 A;  3EJS A;  2ALW A;  3ZED A;  2YIA A;  4FZO A;  3EJU A;  2GF4 A;  4DCN C;  4IW0 A;  4B9Q A;  2RAJ A;  4AZ6 A;  1TQS A;  3LVT A;  1GNL A;  1HWW A;  3EJQ A;  1ZWW A;  2F7R A;  3EJP A;  1U00 A;  3CZS A;  4F00 A;  3D2E A;  3QA8 A;  2MI7 A; 
#chains in the Genus database with same CATH homology
 2ND1 A;  2YI8 A;  4JWD A;  2N3K A;  4NPH A;  4H6H A;  4JWC A;  4IWQ A;  4JWE A;  1SUF A;  1OAO A;  3I39 X;  1DKY A;  3ER9 B;  3B52 X;  2PY6 A;  1OA0 A;  3FD9 A;  3O3M B;  3RV0 A;  2NCZ A;  1GNT A;  1OA1 A;  2GAF D;  4IWP A;  4EZV A;  3LMF A;  1MJG A;  4F01 A;  2LM0 A;  1GN9 A;  4EZP A;  5FIG A;  4R5L A;  4HR1 B;  3O3N B;  4G6Q A;  3DPQ A;  3DPO A;  3T4A G;  4EZR A;  5FLE X;  4R5J A;  3C7N A;  2JNS A;  2YIV X;  4M0M A;  4R5K A;  3KAW A;  4EZN A;  3I04 A;  3B51 X;  4FM3 A;  4KIK B;  3B53 X;  2QXL A;  3D2F A;  4HR1 A;  3I01 A;  5E84 A;  1DKX A;  1UPX A;  2KHO A;  4IWO A;  4EZW A;  3DPP A;  4JNF A;  4EZY A;  4HY9 A;  2WIN M;  2ND0 A;  4KIK A;  4JLC A;  4H6I A;  4JNE A;  2QFF A;  3F7W A;  4UDY X;  3KDR A;  4JWI A;  4IM0 A;  4PO2 A;  2YIB A;  4IM2 A;  4EZS A;  3L3O M;  4EZZ A;  4EZT A;  2X5C A;  3ERC C;  2RT6 A;  4EZO A;  3T48 A;  3T46 A;  3T49 A;  1SU6 A;  2YI9 A;  3RV1 A;  3QNJ A;  3O3O B;  3ZED A;  3VEA A;  1SU7 A;  2YIA A;  4JL9 A;  3OHX M;  3VEB A;  1W9M A;  4E3C A;  1E1D A;  2GA9 D;  4IW0 A;  4R5I A;  4B9Q A;  3OWG A;  4D8J A;  1SU8 A;  4EZX A;  3T47 A;  2OBM A;  3ER8 C;  4HYB A;  2Z8Y A;  2EWF A;  2EX3 B;  4JN4 A;  1GNL A;  3KAV A;  1DKZ A;  2OBL A;  3VKH A;  4R5G A;  1U00 A;  4IM3 A;  1ZYL A;  4F00 A;  5TKY A;  3UIT A;  4EZQ A;  3A98 A;  3D2E A;  1E9V A;  4UDX X;  3GI7 A;  1E2U A;  4E81 A;  4EZU A;  1JQK A;  3QA8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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