2OO2A

Crystal structure of protein af1782 from archaeoglobus fulgidus, pfam duf357
Total Genus 32

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
32
sequence length
76
structure length
76
Chain Sequence
SLEEELRRETLKWLERIEERVKEIEGDEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWAWLEIGLEVGKLHET

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (0-20)AH3 (49-69)AH2 (27-46)S1 (23-25)EMPTYS2 (72-74)TI1 (20-23)TVIII1 (70-73)Updating...
connected with : NaN
molecule tags Structural genomics, unknown function
source organism Archaeoglobus fulgidus dsm 4304
publication title Crystal structure of the hypothetical AF_1782 protein from Archaeoglobus fulgidus
rcsb
molecule keywords Hypothetical protein AF_1782
total genus 32
structure length 76
sequence length 76
ec nomenclature
pdb deposition date 2007-01-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF04010 DUF357 Protein of unknown function (DUF357)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.90 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 AF1782-like 2oo2A00
4AZ5A 4AZGA 2PMRA 2YL6A 2YL5A 4AZHA 4AZ7A 4AZCB 4AZIA 2YLLA 4FZOA 4AZ6A 4AZBA 2YLAA 2JNKA 4AZCA 2OZNB 3RPMA 2YL9A 2YL8A 4FZPA 2OO2A
chains in the Genus database with same CATH superfamily
1OA1A 3D4ZA 4AVMA 3Q84A 1DKXA 3BVTA 2ND0A 3ER9B 2JNKA 3DDGA 3RV0A 4PO2A 2QXLA 3B52X 2OZNB 1I4TA 2ND1A 1ZWWA 1SU6A 1PS3A 3RV1A 2C08A 4HY9A 3BVUA 4AZCB 3C7NA 4M0MA 4E3CA 4FZOA 2ZXQA 1I4LA 3T49A 3T46A 4IM0A 4F01A 4JWDA 4FZSA 4H8SA 3LLLA 4HYBA 2GF4A 1WDZA 2PMRA 3D4YA 3O3NB 1URUA 2PY6A 4AZ7A 4EZQA 2YI9A 2X5CA 3CV5A 2YI8A 3BLBA 4AZCA 3I01A 1OAOA 2F7OA 2LXYA 3OK8A 1QWNA 4IWQA 1I49A 1E2UA 2OBMA 3ACOA 3BUDA 4UDYX 1E1DA 4JNEA 4JNFA 3DX4A 1GN9A 3EJTA 3DPPA 4H6HA 2O0I1 3CKDA 3T4AG 1I4DA 1TQSA 4HR1A 2YKTA 2OBLA 3DDFA 1GNTA 2QKWA 2GAFD 2F7PA 3D2FA 2OW7A 2YL9A 3CZSA 4IM3A 3G9GA 4NQIA 3VEAA 4EZUA 1U00A 4JN4A 3D51A 3L3OM 2YLLA 3B51X 1OA0A 3BUQA 4EZVA 2RT6A 3I04A 3EJUA 2KHOA 1TQWA 3CAZA 3DYTA 2V0OA 1TQUA 3DX0A 4E81A 4EZSA 3A98A 3O3OB 3KAVA 3QNJA 4AZIA 2EX3B 4AZBA 3QA8A 4BNEA 3EJSA 2FYVA 3L3PA 1GNLA 2OO2A 4JWEA 2F18A 1HTYA 2ELBA 2EFLA 4IWOA 1W9MA 1DKYA 3OHXM 2F7QA 1SUFA 2YL5A 3DX2A 1R5EA 2QFFA 2Q12A 2RAJA 3D52A 4R5JA 3HAJA 3BUBA 1HWWA 3VKHA 3KAWA 4KIKA 4NSWA 2D1LA 4R5LA 2WYIA 4HR1B 3F7WA 4NPHA 4H6IA 4R5GA 1LQ7A 3KDRA 2NCZA 3QWEA 3O3MB 3CZNA 2MI7A 3D2EA 3BUIA 3B53X 1O7DC 2X3XA 3DPOA 1X04A 2WYHA 2F1BA 2YIAA 4IWPA 3UITA 2OW6A 4EZZA 3QNIA 4AZ6A 3PLTA 1Y2OA 1SU7A 3QE6A 3T47A 3D50A 3EJQA 4WPEA 4EZRA 5E84A 1MJGA 4FZPA 3HAHA 2D4CA 4I1QA 2Z0VA 4JWCA 3ZEDA 3LMFA 3M3WA 4IW0A 1TQTA 2YLAA 3LVTA 3Q0KA 3BUPA 3I39X 1ZYLA 2Z8YA 3VEBA 3DPQA 3BVVA 5C5BA 2RAIA 4AZGA 1UPXA 5FLEX 2ALWA 2X3WA 2N3KA 3DX1A 2Q13A 2F7RA 4FM3A 2JNSA 1TQVA 4DCNC 4EZTA 2YIVX 2Z0NA 5TKYA 4D8JA 3EJRA 2EWFA 4EZXA 1HXKA 1R33A 4AKVA 3SYVA 3ER8C 3HAIA 2WINM 4KIKB 4DYLA 4JL9A 1QWUA 3CVRA 2F1AA 3ABHA 3EJPA 3BVXA 2RAKA 4G6QA 4ATMA 4EZPA 3T48A 3OWGA 5KBPA 4AZ5A 2X3VA 3DX3A 5FIGA 3I2WA 2GA9D 2YIBA 4AZHA 4F00A 1O7DB 2LM0A 4JWIA 3ERCC 1JQKA 2Z0OA 4R5KA 4B9QA 4EZWA 1R34A 1X03A 2YL8A 4IM2A 3GI7A 2FICA 2EFKA 4JLCA 2YL6A 4WPCA 4EZNA 1YWMA 3FD9A 3RPMA 4EZOA 3SOGA 5C5BB 1DKZA 1E9VA 1SU8A 4EZYA 1QX1A 4UDXX 4R5IA 3BVWA
chains in the Genus database with same CATH topology
4AZ5A 4AZGA 2PMRA 2YL6A 2YL5A 4AZHA 4AZ7A 4AZCB 4AZIA 2YLLA 4FZOA 4AZ6A 4AZBA 2YLAA 2JNKA 4AZCA 2OZNB 3RPMA 2YL9A 2YL8A 4FZPA 2OO2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AZ5 A;  4AZG A;  2PMR A;  2YL6 A;  2YL5 A;  4AZH A;  4AZ7 A;  4AZC B;  4AZI A;  2YLL A;  4FZO A;  4AZ6 A;  4AZB A;  2YLA A;  2JNK A;  4AZC A;  2OZN B;  3RPM A;  2YL9 A;  2YL8 A;  4FZP A;  2OO2 A; 
#chains in the Genus database with same CATH topology
 1OA1 A;  3D4Z A;  4AVM A;  3Q84 A;  1DKX A;  3BVT A;  2ND0 A;  3ER9 B;  2JNK A;  3DDG A;  3RV0 A;  4PO2 A;  2QXL A;  3B52 X;  2OZN B;  1I4T A;  2ND1 A;  1ZWW A;  1SU6 A;  1PS3 A;  3RV1 A;  2C08 A;  4HY9 A;  3BVU A;  4AZC B;  3C7N A;  4M0M A;  4E3C A;  4FZO A;  2ZXQ A;  1I4L A;  3T49 A;  3T46 A;  4IM0 A;  4F01 A;  4JWD A;  4FZS A;  4H8S A;  3LLL A;  4HYB A;  2GF4 A;  1WDZ A;  2PMR A;  3D4Y A;  3O3N B;  1URU A;  2PY6 A;  4AZ7 A;  4EZQ A;  2YI9 A;  2X5C A;  3CV5 A;  2YI8 A;  3BLB A;  4AZC A;  3I01 A;  1OAO A;  2F7O A;  2LXY A;  3OK8 A;  1QWN A;  4IWQ A;  1I49 A;  1E2U A;  2OBM A;  3ACO A;  3BUD A;  4UDY X;  1E1D A;  4JNE A;  4JNF A;  3DX4 A;  1GN9 A;  3EJT A;  3DPP A;  4H6H A;  2O0I 1;  3CKD A;  3T4A G;  1I4D A;  1TQS A;  4HR1 A;  2YKT A;  2OBL A;  3DDF A;  1GNT A;  2QKW A;  2GAF D;  2F7P A;  3D2F A;  2OW7 A;  2YL9 A;  3CZS A;  4IM3 A;  3G9G A;  4NQI A;  3VEA A;  4EZU A;  1U00 A;  4JN4 A;  3D51 A;  3L3O M;  2YLL A;  3B51 X;  1OA0 A;  3BUQ A;  4EZV A;  2RT6 A;  3I04 A;  3EJU A;  2KHO A;  1TQW A;  3CAZ A;  3DYT A;  2V0O A;  1TQU A;  3DX0 A;  4E81 A;  4EZS A;  3A98 A;  3O3O B;  3KAV A;  3QNJ A;  4AZI A;  2EX3 B;  4AZB A;  3QA8 A;  4BNE A;  3EJS A;  2FYV A;  3L3P A;  1GNL A;  2OO2 A;  4JWE A;  2F18 A;  1HTY A;  2ELB A;  2EFL A;  4IWO A;  1W9M A;  1DKY A;  3OHX M;  2F7Q A;  1SUF A;  2YL5 A;  3DX2 A;  1R5E A;  2QFF A;  2Q12 A;  2RAJ A;  3D52 A;  4R5J A;  3HAJ A;  3BUB A;  1HWW A;  3VKH A;  3KAW A;  4KIK A;  4NSW A;  2D1L A;  4R5L A;  2WYI A;  4HR1 B;  3F7W A;  4NPH A;  4H6I A;  4R5G A;  1LQ7 A;  3KDR A;  2NCZ A;  3QWE A;  3O3M B;  3CZN A;  2MI7 A;  3D2E A;  3BUI A;  3B53 X;  1O7D C;  2X3X A;  3DPO A;  1X04 A;  2WYH A;  2F1B A;  2YIA A;  4IWP A;  3UIT A;  2OW6 A;  4EZZ A;  3QNI A;  4AZ6 A;  3PLT A;  1Y2O A;  1SU7 A;  3QE6 A;  3T47 A;  3D50 A;  3EJQ A;  4WPE A;  4EZR A;  5E84 A;  1MJG A;  4FZP A;  3HAH A;  2D4C A;  4I1Q A;  2Z0V A;  4JWC A;  3ZED A;  3LMF A;  3M3W A;  4IW0 A;  1TQT A;  2YLA A;  3LVT A;  3Q0K A;  3BUP A;  3I39 X;  1ZYL A;  2Z8Y A;  3VEB A;  3DPQ A;  3BVV A;  5C5B A;  2RAI A;  4AZG A;  1UPX A;  5FLE X;  2ALW A;  2X3W A;  2N3K A;  3DX1 A;  2Q13 A;  2F7R A;  4FM3 A;  2JNS A;  1TQV A;  4DCN C;  4EZT A;  2YIV X;  2Z0N A;  5TKY A;  4D8J A;  3EJR A;  2EWF A;  4EZX A;  1HXK A;  1R33 A;  4AKV A;  3SYV A;  3ER8 C;  3HAI A;  2WIN M;  4KIK B;  4DYL A;  4JL9 A;  1QWU A;  3CVR A;  2F1A A;  3ABH A;  3EJP A;  3BVX A;  2RAK A;  4G6Q A;  4ATM A;  4EZP A;  3T48 A;  3OWG A;  5KBP A;  4AZ5 A;  2X3V A;  3DX3 A;  5FIG A;  3I2W A;  2GA9 D;  2YIB A;  4AZH A;  4F00 A;  1O7D B;  2LM0 A;  4JWI A;  3ERC C;  1JQK A;  2Z0O A;  4R5K A;  4B9Q A;  4EZW A;  1R34 A;  1X03 A;  2YL8 A;  4IM2 A;  3GI7 A;  2FIC A;  2EFK A;  4JLC A;  2YL6 A;  4WPC A;  4EZN A;  1YWM A;  3FD9 A;  3RPM A;  4EZO A;  3SOG A;  5C5B B;  1DKZ A;  1E9V A;  1SU8 A;  4EZY A;  1QX1 A;  4UDX X;  4R5I A;  3BVW A; 
#chains in the Genus database with same CATH homology
 4AZ5 A;  4AZG A;  2PMR A;  2YL6 A;  2YL5 A;  4AZH A;  4AZ7 A;  4AZC B;  4AZI A;  2YLL A;  4FZO A;  4AZ6 A;  4AZB A;  2YLA A;  2JNK A;  4AZC A;  2OZN B;  3RPM A;  2YL9 A;  2YL8 A;  4FZP A;  2OO2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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