2V0OA

Fcho2 f-bar domain
Total Genus 117

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
273
structure length
273
Chain Sequence
PMAYFVENFWGEKNSGFDVLYHNMKHGQISTKELADFVRERATIEEAYSRSMTKLAKSASNYSQLGTFAPVWDVFKTSTEKLANCHLDLVRKLQELIKEVQKYGEEQVKSHKKTKEEVAGTLEAVQTIQSITQALQKSKENYNAKCVEQERLKKEGATQREIEKAAVKSKKATDTYKLYVEKYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMANTTVESLIQKFAESKGTGKERPGLIEFEECD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYO1 (3-5)AH4 (160-244)AH1 (5-9)TI1 (12-15)AH3 (71-156)AH2 (16-62)TI2 (67-70)O3 (147-273)AH5 (247-258)O2 (244-246)Updating...
connected with : NaN
molecule tags Lipid binding protein
source organism Homo sapiens
publication title Structure and Analysis of Fcho2 F-Bar Domain: A Dimerizing and Membrane Recruitment Module that Effects Membrane Curvature.
pubmed doi rcsb
molecule keywords FCH DOMAIN ONLY PROTEIN 2
total genus 117
structure length 273
sequence length 273
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-05-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00611 FCH Fes/CIP4, and EFC/F-BAR homology domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 2v0oA00
3QWEA 3CAZA 2Q13A 2V0OA 1X04A 2C08A 1WDZA 3ABHA 4ATMA 3QE6A 2EFKA 2FICA 2D1LA 2ELBA 2D4CA 3I2WA 3PLTA 2Z0OA 2X3XA 4NQIA 2RAJA 3HAHA 1X03A 1Y2OA 4AVMA 3DYTA 3HAIA 3SOGA 4WPEA 3QNIA 2RAKA 1I4LA 3OK8A 2Q12A 3SYVA 2EFLA 2Z0NA 5C5BA 2RAIA 1ZWWA 2X3VA 3G9GA 3HAJA 3ACOA 4BNEA 4H8SA 3Q84A 4NSWA 3LLLA 5C5BB 4AKVA 1I49A 4FZSA 4I1QA 3M3WA 3Q0KA 2X3WA 2YKTA 1URUA 4WPCA 1I4TA 4DCNC 2Z0VA 1I4DA 4DYLA
chains in the Genus database with same CATH superfamily
1R34A 3KAVA 4AZ6A 1QX1A 4EZNA 4AZGA 3RPMA 4H6IA 1TQSA 4G6QA 1Y2OA 3I39X 1R33A 2GA9D 4HR1A 3LVTA 4IM3A 4I1QA 3DPOA 3Q0KA 2ALWA 1JQKA 2Z0OA 3OWGA 4NQIA 1X03A 5TKYA 3ERCC 5FLEX 2ND0A 1ZWWA 4FZOA 4AKVA 4R5GA 3FD9A 4AZCB 2YLLA 3B51X 2C08A 4IWPA 2FYVA 3EJSA 3DDGA 3BUIA 2PY6A 2YI9A 3B52X 3D4YA 4F00A 1E1DA 2F1BA 3T48A 3EJPA 3DX2A 1LQ7A 4NSWA 2F7RA 3QWEA 1DKXA 3I04A 4JN4A 4JLCA 5FIGA 2YL9A 4EZXA 3I01A 2WINM 4EZZA 2WYIA 4AZIA 4EZPA 3DYTA 3BVXA 3D52A 2QXLA 4UDYX 1I4TA 2F7PA 2Q13A 2V0OA 1UPXA 3EJUA 1TQWA 1QWUA 1PS3A 2YL8A 3I2WA 2X5CA 3EJRA 2F18A 1ZYLA 2Q12A 3BLBA 2ND1A 5C5BA 1TQUA 1HXKA 2YKTA 2N3KA 4NPHA 3CAZA 3EJQA 1WDZA 3EJTA 3DPQA 4D8JA 3F7WA 4R5LA 3D2EA 3QA8A 3HAJA 2KHOA 4E3CA 4R5IA 2JNSA 4JL9A 2LXYA 4KIKA 4EZUA 4ATMA 2D4CA 2Z8YA 2OBLA 4EZTA 3QNIA 1I4LA 4M0MA 2EFLA 2YIBA 2F1AA 4IW0A 3D50A 3A98A 1I4DA 2OW7A 3DX3A 4EZRA 3ER8C 3ABHA 1W9MA 3CV5A 2OZNB 3DPPA 3O3MB 3HAHA 3D2FA 1OA1A 2F7OA 2RAKA 2QKWA 4IWOA 3BUQA 4AZ7A 1I49A 1HTYA 2O0I1 3HAIA 1GNLA 3D4ZA 4AVMA 2RAJA 3KAWA 3T49A 3O3NB 2Z0NA 3G9GA 4HR1B 3O3OB 1SUFA 1DKYA 3DX0A 4R5KA 1SU6A 2YI8A 1U00A 4EZYA 4JNFA 4H8SA 3Q84A 4AZCA 4FZSA 2X3WA 4EZQA 3OHXM 3VEBA 2ELBA 1O7DC 4JWEA 5KBPA 2GAFD 2JNKA 3L3PA 1GNTA 3L3OM 3ER9B 2YL6A 2F7QA 2MI7A 3B53X 3M3WA 3QNJA 3RV1A 4WPCA 3KDRA 3DX4A 3CVRA 3BVWA 1OAOA 1E2UA 4EZOA 3QE6A 2RT6A 2X3XA 3BVTA 1YWMA 1QWNA 4JWDA 4BNEA 3ZEDA 3CKDA 4HYBA 1E9VA 2FICA 2EWFA 2WYHA 3BUBA 3OK8A 2OW6A 1TQVA 3DX1A 3ACOA 3BUPA 3DDFA 5C5BB 2PMRA 4B9QA 2YL5A 3T4AG 2GF4A 3D51A 3PLTA 4F01A 2QFFA 3CZNA 1R5EA 3SOGA 4WPEA 3VEAA 2RAIA 1TQTA 4IWQA 3LLLA 1MJGA 4DCNC 4AZ5A 3BUDA 1HWWA 4IM0A 2YIVX 4UDXX 1X04A 4HY9A 1SU7A 2D1LA 2EFKA 4PO2A 4E81A 4JWCA 4KIKB 4EZSA 2LM0A 1O7DB 2ZXQA 3SYVA 3RV0A 2OO2A 1OA0A 2X3VA 3CZSA 1SU8A 4IM2A 4EZWA 4FM3A 1URUA 2OBMA 4AZHA 4DYLA 1DKZA 4EZVA 3T47A 4JNEA 3C7NA 3VKHA 4FZPA 2YLAA 3LMFA 3BVVA 4AZBA 2EX3B 4H6HA 3UITA 4JWIA 3T46A 3GI7A 2NCZA 3BVUA 1GN9A 5E84A 4R5JA 2YIAA 2Z0VA
chains in the Genus database with same CATH topology
3QWEA 3CAZA 2Q13A 2V0OA 1X04A 2C08A 1WDZA 3ABHA 4ATMA 3QE6A 2EFKA 2FICA 2D1LA 2ELBA 2D4CA 3I2WA 3PLTA 2Z0OA 2X3XA 4NQIA 2RAJA 3HAHA 1X03A 1Y2OA 4AVMA 3DYTA 3HAIA 3SOGA 4WPEA 3QNIA 2RAKA 1I4LA 3OK8A 2Q12A 3SYVA 2EFLA 2Z0NA 5C5BA 2RAIA 1ZWWA 2X3VA 3G9GA 3HAJA 3ACOA 4BNEA 4H8SA 3Q84A 4NSWA 3LLLA 5C5BB 4AKVA 1I49A 4FZSA 4I1QA 3M3WA 3Q0KA 2X3WA 2YKTA 1URUA 4WPCA 1I4TA 4DCNC 2Z0VA 1I4DA 4DYLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3QWE A;  3CAZ A;  2Q13 A;  2V0O A;  1X04 A;  2C08 A;  1WDZ A;  3ABH A;  4ATM A;  3QE6 A;  2EFK A;  2FIC A;  2D1L A;  2ELB A;  2D4C A;  3I2W A;  3PLT A;  2Z0O A;  2X3X A;  4NQI A;  2RAJ A;  3HAH A;  1X03 A;  1Y2O A;  4AVM A;  3DYT A;  3HAI A;  3SOG A;  4WPE A;  3QNI A;  2RAK A;  1I4L A;  3OK8 A;  2Q12 A;  3SYV A;  2EFL A;  2Z0N A;  5C5B A;  2RAI A;  1ZWW A;  2X3V A;  3G9G A;  3HAJ A;  3ACO A;  4BNE A;  4H8S A;  3Q84 A;  4NSW A;  3LLL A;  5C5B B;  4AKV A;  1I49 A;  4FZS A;  4I1Q A;  3M3W A;  3Q0K A;  2X3W A;  2YKT A;  1URU A;  4WPC A;  1I4T A;  4DCN C;  2Z0V A;  1I4D A;  4DYL A; 
#chains in the Genus database with same CATH topology
 1R34 A;  3KAV A;  4AZ6 A;  1QX1 A;  4EZN A;  4AZG A;  3RPM A;  4H6I A;  1TQS A;  4G6Q A;  1Y2O A;  3I39 X;  1R33 A;  2GA9 D;  4HR1 A;  3LVT A;  4IM3 A;  4I1Q A;  3DPO A;  3Q0K A;  2ALW A;  1JQK A;  2Z0O A;  3OWG A;  4NQI A;  1X03 A;  5TKY A;  3ERC C;  5FLE X;  2ND0 A;  1ZWW A;  4FZO A;  4AKV A;  4R5G A;  3FD9 A;  4AZC B;  2YLL A;  3B51 X;  2C08 A;  4IWP A;  2FYV A;  3EJS A;  3DDG A;  3BUI A;  2PY6 A;  2YI9 A;  3B52 X;  3D4Y A;  4F00 A;  1E1D A;  2F1B A;  3T48 A;  3EJP A;  3DX2 A;  1LQ7 A;  4NSW A;  2F7R A;  3QWE A;  1DKX A;  3I04 A;  4JN4 A;  4JLC A;  5FIG A;  2YL9 A;  4EZX A;  3I01 A;  2WIN M;  4EZZ A;  2WYI A;  4AZI A;  4EZP A;  3DYT A;  3BVX A;  3D52 A;  2QXL A;  4UDY X;  1I4T A;  2F7P A;  2Q13 A;  2V0O A;  1UPX A;  3EJU A;  1TQW A;  1QWU A;  1PS3 A;  2YL8 A;  3I2W A;  2X5C A;  3EJR A;  2F18 A;  1ZYL A;  2Q12 A;  3BLB A;  2ND1 A;  5C5B A;  1TQU A;  1HXK A;  2YKT A;  2N3K A;  4NPH A;  3CAZ A;  3EJQ A;  1WDZ A;  3EJT A;  3DPQ A;  4D8J A;  3F7W A;  4R5L A;  3D2E A;  3QA8 A;  3HAJ A;  2KHO A;  4E3C A;  4R5I A;  2JNS A;  4JL9 A;  2LXY A;  4KIK A;  4EZU A;  4ATM A;  2D4C A;  2Z8Y A;  2OBL A;  4EZT A;  3QNI A;  1I4L A;  4M0M A;  2EFL A;  2YIB A;  2F1A A;  4IW0 A;  3D50 A;  3A98 A;  1I4D A;  2OW7 A;  3DX3 A;  4EZR A;  3ER8 C;  3ABH A;  1W9M A;  3CV5 A;  2OZN B;  3DPP A;  3O3M B;  3HAH A;  3D2F A;  1OA1 A;  2F7O A;  2RAK A;  2QKW A;  4IWO A;  3BUQ A;  4AZ7 A;  1I49 A;  1HTY A;  2O0I 1;  3HAI A;  1GNL A;  3D4Z A;  4AVM A;  2RAJ A;  3KAW A;  3T49 A;  3O3N B;  2Z0N A;  3G9G A;  4HR1 B;  3O3O B;  1SUF A;  1DKY A;  3DX0 A;  4R5K A;  1SU6 A;  2YI8 A;  1U00 A;  4EZY A;  4JNF A;  4H8S A;  3Q84 A;  4AZC A;  4FZS A;  2X3W A;  4EZQ A;  3OHX M;  3VEB A;  2ELB A;  1O7D C;  4JWE A;  5KBP A;  2GAF D;  2JNK A;  3L3P A;  1GNT A;  3L3O M;  3ER9 B;  2YL6 A;  2F7Q A;  2MI7 A;  3B53 X;  3M3W A;  3QNJ A;  3RV1 A;  4WPC A;  3KDR A;  3DX4 A;  3CVR A;  3BVW A;  1OAO A;  1E2U A;  4EZO A;  3QE6 A;  2RT6 A;  2X3X A;  3BVT A;  1YWM A;  1QWN A;  4JWD A;  4BNE A;  3ZED A;  3CKD A;  4HYB A;  1E9V A;  2FIC A;  2EWF A;  2WYH A;  3BUB A;  3OK8 A;  2OW6 A;  1TQV A;  3DX1 A;  3ACO A;  3BUP A;  3DDF A;  5C5B B;  2PMR A;  4B9Q A;  2YL5 A;  3T4A G;  2GF4 A;  3D51 A;  3PLT A;  4F01 A;  2QFF A;  3CZN A;  1R5E A;  3SOG A;  4WPE A;  3VEA A;  2RAI A;  1TQT A;  4IWQ A;  3LLL A;  1MJG A;  4DCN C;  4AZ5 A;  3BUD A;  1HWW A;  4IM0 A;  2YIV X;  4UDX X;  1X04 A;  4HY9 A;  1SU7 A;  2D1L A;  2EFK A;  4PO2 A;  4E81 A;  4JWC A;  4KIK B;  4EZS A;  2LM0 A;  1O7D B;  2ZXQ A;  3SYV A;  3RV0 A;  2OO2 A;  1OA0 A;  2X3V A;  3CZS A;  1SU8 A;  4IM2 A;  4EZW A;  4FM3 A;  1URU A;  2OBM A;  4AZH A;  4DYL A;  1DKZ A;  4EZV A;  3T47 A;  4JNE A;  3C7N A;  3VKH A;  4FZP A;  2YLA A;  3LMF A;  3BVV A;  4AZB A;  2EX3 B;  4H6H A;  3UIT A;  4JWI A;  3T46 A;  3GI7 A;  2NCZ A;  3BVU A;  1GN9 A;  5E84 A;  4R5J A;  2YIA A;  2Z0V A; 
#chains in the Genus database with same CATH homology
 3QWE A;  3CAZ A;  2Q13 A;  2V0O A;  1X04 A;  2C08 A;  1WDZ A;  3ABH A;  4ATM A;  3QE6 A;  2EFK A;  2FIC A;  2D1L A;  2ELB A;  2D4C A;  3I2W A;  3PLT A;  2Z0O A;  2X3X A;  4NQI A;  2RAJ A;  3HAH A;  1X03 A;  1Y2O A;  4AVM A;  3DYT A;  3HAI A;  3SOG A;  4WPE A;  3QNI A;  2RAK A;  1I4L A;  3OK8 A;  2Q12 A;  3SYV A;  2EFL A;  2Z0N A;  5C5B A;  2RAI A;  1ZWW A;  2X3V A;  3G9G A;  3HAJ A;  3ACO A;  4BNE A;  4H8S A;  3Q84 A;  4NSW A;  3LLL A;  5C5B B;  4AKV A;  1I49 A;  4FZS A;  4I1Q A;  3M3W A;  3Q0K A;  2X3W A;  2YKT A;  1URU A;  4WPC A;  1I4T A;  4DCN C;  2Z0V A;  1I4D A;  4DYL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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