2WJ9A

Ardb
Total Genus 47

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
47
sequence length
149
structure length
138
Chain Sequence
TSSACAPETGLQQLVATIVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCCIWNLYTLNNGGAFMAPEETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
AH2 (49-61)S1 (24-26)3H1 (29-34)AH3 (108-127)AH1 (35-41)S5 (102-106)3H2 (46-48)O1 (13-125)TII1 (43-46)TI1 (74-77)TI3 (98-101)AH4 (130-145)TIV1 (75-78)S3 (79-83)EMPTYS4 (93-97)S2 (69-74)TI2 (97-100)Updating...
connected with : NaN
molecule tags Hydrolase inhibitor
source organism Escherichia coli cft073
publication title The Scottish Structural Proteomics Facility: Targets, Methods and Outputs.
pubmed doi rcsb
molecule keywords INTERGENIC-REGION PROTEIN
total genus 47
structure length 138
sequence length 149
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-05-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03230 Antirestrict Antirestriction protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.472.120 Mainly Alpha Orthogonal Bundle Cyclin A; domain 1 Cyclin A; domain 1 2wj9A00
2WJ9A 2KMGA
chains in the Genus database with same CATH superfamily
1XO2A 3A8LB 2I40B 2ZPIB 2PK9B 2WEVB 4CXAB 2V22B 3MY5B 3QHRB 2IVXA 4BCNB 1H26B 3O0GD 3QYHB 1E9HB 4EOKB 3VKGA 2CCHB 4EOQB 2QF7A 2W9ZA 3BG9A 4KRDB 2UUEB 1P5EB 2ZCFB 2DD5B 2CZ0B 2IW8B 2CZ6B 2G9XB 1H1QB 3LQ5B 2W96A 3TNIB 1GUXA 4BXXX 1H1RB 2WXVB 2UZBB 2I53A 4BCQD 2C4GB 1FVVB 3X26B 2G77A 3HHTB 4II5B 4HLQA 4YOZA 5HNBB 1GUXB 4HNTA 3HO8A 4HNUA 4BCGB 4BCOB 2ZPHB 2KMGA 3QYEA 3DJBA 2CYZB 3X28B 4AI6A 2CCIB 1AD6A 3A8HB 4ZGJB 2C6TB 3RGFB 4BY7X 1OI9B 2F2CA 4G6LB 4CFNB 2CZ1B 4F7LB 4YOOA 3KHIA 3H4CA 2UZEB 1ZP2A 4F6UB 4BCMB 2UZDB 1GH6B 4I3ZB 4LOCA 2W2HA 4BCFB 3VYHB 5LQFB 1H4LD 2ZPBB 4F6SB 2QQ8A 4HL4A 1KXUA 2IW9B 4QSHA 4YOSA 1UNHD 2C5OB 1F5QB 1IREB 1VYWB 4CFVB 1H28B 4MIMA 1OIUB 2PMIB 1UNGD 5BNJB 4EOSB 4OB0B 2ZPGB 3A8MB 2DXCB 2D0QB 1OIYB 3A8OB 2DD4B 3HB9A 1G3NC 5ACBA 3HBLA 1H27B 3NDQA 1UGSB 4FX3B 4BCIB 1W98B 3X24B 4JX5A 4EORB 2PK2A 3MY1B 4EOJB 2ZPEB 5HBHB 4F6WB 3X25B 4Z6YA 4F70B 4AKHA 4EC8B 5L2WB 4BBRM 3G33B 3K7AM 2BS3A 2W99A 5EFQB 4CFMB 3QXEB 5IDPB 2JGZB 1H24B 3DDQB 4OB2B 1OL2B 3TNWB 4BBSM 3QWLA 4Y72B 1N4MA 5HBEB 2R7GA 4MFDA 3M03A 3POMA 1BU2A 1TFBA 3BG5A 4NSTB 4BCPB 2DMEA 3TNHB 4BCQB 4F7NB 4CFXB 3WVEB 4OB1B 2WHBB 3BHVB 1OKVB 3MI9B 1H1SB 4M6VA 1JSUB 4MFEA 1PKDB 5HBJB 2LW4A 2IW6B 4JX4A 4BCND 1AISB 2WIHB 3BLQB 3GTMS 4ZGEB 4JX6A 1TD6A 4HNVA 2DPPB 1JKWA 1V29B 1FINB 4EONB 2PHGA 2ZZDB 5HVYB 1H1PB 5CEIB 4CFWB 5IHYA 2W9FA 4CFUD 3MIAB 3QHWB 3TW6A 4EOIB 5IDNB 3BLRB 2C5NB 1UGRB 3DL1A 2WJ9A 2BS2A 4BCJB 2WMAB 4EOLB 4EOPB 1QLBA 2QDYB 1VINA 2WMBB 4AKIA 1OKWB 1QMZB 2QFZA 1H25B 1JSTB 4TTHA 4OB3B 3WVDB 3DOGB 2WFYB 2C5XB 1E7PA 3EJ1B 3VYGB 4UN0A 2CJMB 4CFUB 4AKGA 3VKHA 5CYIB 5IF1B 1UGPB 3BLHB 4BCHB 3TN8B 3DTOA 1JOWA 3EIDB 2AHJB 4BCMD 4OGRB 4RODA 3QZ9B 1O9KA 1C9BA 2PJQA 5DQVA 2ZPFB 4OR5B 5I5ZB 3QYGB 1UGQB 3PO3S 2WIPB 1O9KB 2BS4A 3TW7A 5ICPB 1GY3B 3B57A 3BHTB 3EOCB 4EC9B 4F7JB 1FKMA 1D3UB 3QZ5B 5FGKB 1UNLD 2IN3A 1OL1B 2C5VB 2EUFA 4IMYB 4ELLA 5HQ0B 2B9RA 3F5XB 3QYBA 4ROEA 5DQWA 4ROCA 4BCKB 1VOLA 4F7SB 4KRCB 4ZGDB 3HZJA 4NC6A 4EOOB 4YC3B 3BG3A 2QGSA 2BKZB 4FM4B 5LMKB 2CZ7B 2UZLB 4ELJA 5EJCA 1AHJB 1URCB 3BHUB 3X20B 2QDJA 3A8GB 3DDPB 4CRLB 2BPMB 4BY1X 4EOMB 1OGUB 2KR6A 2DXBB 1ENWA 2X1NB 2WPAB
chains in the Genus database with same CATH topology
2QQ8A 4HL4A 4AKGA 3VKHA 1UGPB 3A8LB 4QSHA 4MFDA 2ZPIB 3QYHB 1IREB 3BG5A 2AHJB 3VKGA 3QZ9B 4MIMA 2QF7A 2ZPFB 3WVEB 4OB1B 3BG9A 3QYGB 1UGQB 4M6VA 4OB0B 2ZCFB 2ZPGB 2DD5B 2DXCB 2D0QB 3A8MB 4MFEA 2CZ0B 3A8OB 2DD4B 3HB9A 2CZ6B 2BS4A 3TW7A 4JX4A 3HBLA 1UGSB 4ZGEB 4JX6A 4HNVA 1FKMA 3X24B 2DPPB 3X26B 4JX5A 1V29B 2G77A 3HHTB 2ZZDB 3QZ5B 4HLQA 2ZPEB 4HNTA 3HO8A 4HNUA 3TW6A 2ZPHB 2KMGA 3QYEA 3QYBA 2CYZB 1UGRB 3DL1A 2WJ9A 3X28B 2BS2A 3X25B 4Z6YA 4ZGDB 3HZJA 4NC6A 4AKHA 4AI6A 3BG3A 4BBRM 1QLBA 3A8HB 2QDYB 4ZGJB 2BS3A 4FM4B 4AKIA 2QFZA 3QXEB 2CZ7B 4ELJA 5EJCA 1AHJB 2CZ1B 3X20B 2QDJA 3KHIA 3A8GB 3H4CA 4OB3B 3WVDB 4OB2B 1E7PA 3VYGB 4BBSM 2KR6A 4LOCA 2DXBB 3VYHB 3QWLA 2ZPBB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2WJ9 A;  2KMG A; 
#chains in the Genus database with same CATH topology
 1XO2 A;  3A8L B;  2I40 B;  2ZPI B;  2PK9 B;  2WEV B;  4CXA B;  2V22 B;  3MY5 B;  3QHR B;  2IVX A;  4BCN B;  1H26 B;  3O0G D;  3QYH B;  1E9H B;  4EOK B;  3VKG A;  2CCH B;  4EOQ B;  2QF7 A;  2W9Z A;  3BG9 A;  4KRD B;  2UUE B;  1P5E B;  2ZCF B;  2DD5 B;  2CZ0 B;  2IW8 B;  2CZ6 B;  2G9X B;  1H1Q B;  3LQ5 B;  2W96 A;  3TNI B;  1GUX A;  4BXX X;  1H1R B;  2WXV B;  2UZB B;  2I53 A;  4BCQ D;  2C4G B;  1FVV B;  3X26 B;  2G77 A;  3HHT B;  4II5 B;  4HLQ A;  4YOZ A;  5HNB B;  1GUX B;  4HNT A;  3HO8 A;  4HNU A;  4BCG B;  4BCO B;  2ZPH B;  2KMG A;  3QYE A;  3DJB A;  2CYZ B;  3X28 B;  4AI6 A;  2CCI B;  1AD6 A;  3A8H B;  4ZGJ B;  2C6T B;  3RGF B;  4BY7 X;  1OI9 B;  2F2C A;  4G6L B;  4CFN B;  2CZ1 B;  4F7L B;  4YOO A;  3KHI A;  3H4C A;  2UZE B;  1ZP2 A;  4F6U B;  4BCM B;  2UZD B;  1GH6 B;  4I3Z B;  4LOC A;  2W2H A;  4BCF B;  3VYH B;  5LQF B;  1H4L D;  2ZPB B;  4F6S B;  2QQ8 A;  4HL4 A;  1KXU A;  2IW9 B;  4QSH A;  4YOS A;  1UNH D;  2C5O B;  1F5Q B;  1IRE B;  1VYW B;  4CFV B;  1H28 B;  4MIM A;  1OIU B;  2PMI B;  1UNG D;  5BNJ B;  4EOS B;  4OB0 B;  2ZPG B;  3A8M B;  2DXC B;  2D0Q B;  1OIY B;  3A8O B;  2DD4 B;  3HB9 A;  1G3N C;  5ACB A;  3HBL A;  1H27 B;  3NDQ A;  1UGS B;  4FX3 B;  4BCI B;  1W98 B;  3X24 B;  4JX5 A;  4EOR B;  2PK2 A;  3MY1 B;  4EOJ B;  2ZPE B;  5HBH B;  4F6W B;  3X25 B;  4Z6Y A;  4F70 B;  4AKH A;  4EC8 B;  5L2W B;  4BBR M;  3G33 B;  3K7A M;  2BS3 A;  2W99 A;  5EFQ B;  4CFM B;  3QXE B;  5IDP B;  2JGZ B;  1H24 B;  3DDQ B;  4OB2 B;  1OL2 B;  3TNW B;  4BBS M;  3QWL A;  4Y72 B;  1N4M A;  5HBE B;  2R7G A;  4MFD A;  3M03 A;  3POM A;  1BU2 A;  1TFB A;  3BG5 A;  4NST B;  4BCP B;  2DME A;  3TNH B;  4BCQ B;  4F7N B;  4CFX B;  3WVE B;  4OB1 B;  2WHB B;  3BHV B;  1OKV B;  3MI9 B;  1H1S B;  4M6V A;  1JSU B;  4MFE A;  1PKD B;  5HBJ B;  2LW4 A;  2IW6 B;  4JX4 A;  4BCN D;  1AIS B;  2WIH B;  3BLQ B;  3GTM S;  4ZGE B;  4JX6 A;  1TD6 A;  4HNV A;  2DPP B;  1JKW A;  1V29 B;  1FIN B;  4EON B;  2PHG A;  2ZZD B;  5HVY B;  1H1P B;  5CEI B;  4CFW B;  5IHY A;  2W9F A;  4CFU D;  3MIA B;  3QHW B;  3TW6 A;  4EOI B;  5IDN B;  3BLR B;  2C5N B;  1UGR B;  3DL1 A;  2WJ9 A;  2BS2 A;  4BCJ B;  2WMA B;  4EOL B;  4EOP B;  1QLB A;  2QDY B;  1VIN A;  2WMB B;  4AKI A;  1OKW B;  1QMZ B;  2QFZ A;  1H25 B;  1JST B;  4TTH A;  4OB3 B;  3WVD B;  3DOG B;  2WFY B;  2C5X B;  1E7P A;  3EJ1 B;  3VYG B;  4UN0 A;  2CJM B;  4CFU B;  4AKG A;  3VKH A;  5CYI B;  5IF1 B;  1UGP B;  3BLH B;  4BCH B;  3TN8 B;  3DTO A;  1JOW A;  3EID B;  2AHJ B;  4BCM D;  4OGR B;  4ROD A;  3QZ9 B;  1O9K A;  1C9B A;  2PJQ A;  5DQV A;  2ZPF B;  4OR5 B;  5I5Z B;  3QYG B;  1UGQ B;  3PO3 S;  2WIP B;  1O9K B;  2BS4 A;  3TW7 A;  5ICP B;  1GY3 B;  3B57 A;  3BHT B;  3EOC B;  4EC9 B;  4F7J B;  1FKM A;  1D3U B;  3QZ5 B;  5FGK B;  1UNL D;  2IN3 A;  1OL1 B;  2C5V B;  2EUF A;  4IMY B;  4ELL A;  5HQ0 B;  2B9R A;  3F5X B;  3QYB A;  4ROE A;  5DQW A;  4ROC A;  4BCK B;  1VOL A;  4F7S B;  4KRC B;  4ZGD B;  3HZJ A;  4NC6 A;  4EOO B;  4YC3 B;  3BG3 A;  2QGS A;  2BKZ B;  4FM4 B;  5LMK B;  2CZ7 B;  2UZL B;  4ELJ A;  5EJC A;  1AHJ B;  1URC B;  3BHU B;  3X20 B;  2QDJ A;  3A8G B;  3DDP B;  4CRL B;  2BPM B;  4BY1 X;  4EOM B;  1OGU B;  2KR6 A;  2DXB B;  1ENW A;  2X1N B;  2WPA B; 
#chains in the Genus database with same CATH homology
 2QQ8 A;  4HL4 A;  4AKG A;  3VKH A;  1UGP B;  3A8L B;  4QSH A;  4MFD A;  2ZPI B;  3QYH B;  1IRE B;  3BG5 A;  2AHJ B;  3VKG A;  3QZ9 B;  4MIM A;  2QF7 A;  2ZPF B;  3WVE B;  4OB1 B;  3BG9 A;  3QYG B;  1UGQ B;  4M6V A;  4OB0 B;  2ZCF B;  2ZPG B;  2DD5 B;  2DXC B;  2D0Q B;  3A8M B;  4MFE A;  2CZ0 B;  3A8O B;  2DD4 B;  3HB9 A;  2CZ6 B;  2BS4 A;  3TW7 A;  4JX4 A;  3HBL A;  1UGS B;  4ZGE B;  4JX6 A;  4HNV A;  1FKM A;  3X24 B;  2DPP B;  3X26 B;  4JX5 A;  1V29 B;  2G77 A;  3HHT B;  2ZZD B;  3QZ5 B;  4HLQ A;  2ZPE B;  4HNT A;  3HO8 A;  4HNU A;  3TW6 A;  2ZPH B;  2KMG A;  3QYE A;  3QYB A;  2CYZ B;  1UGR B;  3DL1 A;  2WJ9 A;  3X28 B;  2BS2 A;  3X25 B;  4Z6Y A;  4ZGD B;  3HZJ A;  4NC6 A;  4AKH A;  4AI6 A;  3BG3 A;  4BBR M;  1QLB A;  3A8H B;  2QDY B;  4ZGJ B;  2BS3 A;  4FM4 B;  4AKI A;  2QFZ A;  3QXE B;  2CZ7 B;  4ELJ A;  5EJC A;  1AHJ B;  2CZ1 B;  3X20 B;  2QDJ A;  3KHI A;  3A8G B;  3H4C A;  4OB3 B;  3WVD B;  4OB2 B;  1E7P A;  3VYG B;  4BBS M;  2KR6 A;  4LOC A;  2DXB B;  3VYH B;  3QWL A;  2ZPB B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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