2ZZDB

Recombinant thiocyanate hydrolase, air-oxidized form of holo-enzyme
Total Genus 46

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
153
structure length
153
Chain Sequence
SSIREEVHRHLGTVALMQPALHQQTHAPAPTEITHTLFRAYTRVPHDVGGEADVPIEYHEKEEEIWELNTFATCECLAWRGVWTAEERRRKQNCDVGQTVYLGMPYYGRWLLTAARILVDKQFVTLTELHNKIVEMRERVASGQGLGEYLPPK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
AH2 (37-44)TII1 (50-53)TI1 (46-49)EMPTYAH3 (67-82)TIV2 (83-86)AH4 (87-96)TI2 (96-99)AH5 (100-105)AH6 (108-123)TVIII1 (124-127)AH7 (128-144)TVIII2 (150-153)3H1 (32-34)TIV1 (27-30)TII'1 (148-151)AH1 (4-19)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Thiobacillus thioparus
publication title Structural Basis for Catalytic Activation of Thiocyanate Hydrolase Involving Metal-Ligated Cysteine Modification
pubmed doi rcsb
molecule keywords Thiocyanate hydrolase subunit alpha
total genus 46
structure length 153
sequence length 153
chains with identical sequence E, H, K
ec nomenclature ec 3.5.5.8: Thiocyanate hydrolase.
pdb deposition date 2009-02-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF02211 NHase_beta Nitrile hydratase beta subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.472.20 Mainly Alpha Orthogonal Bundle Cyclin A; domain 1 Cyclin A; domain 1 2zzdB00
2D0QB 1IREB 3A8MB 4ZGDB 2DXCB 1AHJB 2CYZB 3QYGB 4FM4B 3QXEB 2DD5B 2CZ6B 2QDYB 2ZCFB 2DXBB 3A8GB 2CZ1B 2ZPIB 4ZGJB 2DPPB 3QZ9B 4ZGEB 3A8LB 3VYHB 4OB3B 1UGRB 2ZPGB 2ZZDB 2DD4B 3X26B 3QYHB 2ZPBB 3X20B 1V29B 3X25B 2AHJB 3A8OB 2ZPHB 1UGQB 2CZ7B 3VYGB 2CZ0B 3HHTB 4OB2B 3WVEB 3X24B 3A8HB 1UGSB 2ZPFB 3WVDB 4OB1B 3QZ5B 3X28B 4OB0B 2ZPEB 1UGPB
chains in the Genus database with same CATH superfamily
1P5EB 2DXCB 4ZGJB 2C5VB 3A8GB 4ZGEB 2ZPGB 1UNHD 3EOCB 5ACBA 3QYEA 4EONB 2WFYB 3VYGB 4F6WB 2IVXA 1OL2B 2V22B 2JGZB 3TNHB 1OI9B 3NDQA 3BHUB 3M03A 1XO2A 1H1PB 1GUXA 3BG5A 1JSUB 2UZEB 1OL1B 2B9RA 2WIHB 4HNVA 2ZPFB 3QZ5B 4YOZA 1QMZB 5IF1B 1GH6B 1QLBA 3EJ1B 3BLQB 2WXVB 3QHWB 4AKHA 2UZLB 2PK2A 3TW7A 4KRDB 5IDPB 2CCIB 2IW9B 4EOKB 4G6LB 2X1NB 3QHRB 2PMIB 1H26B 4JX6A 2F2CA 2QGSA 4M6VA 1H28B 1OIYB 2UZDB 4YOSA 3MI9B 2C5OB 3A8OB 1H1RB 4CFWB 1UGQB 3G33B 5HBHB 4NC6A 4BCOB 5HBEB 1H4LD 3QZ9B 3DDPB 3A8LB 4IMYB 1UGRB 4F6SB 2W96A 3X20B 4EC9B 5DQWA 4BCPB 4BY1X 5IHYA 3WVEB 2BS2A 3HZJA 5CEIB 4BCQD 3X28B 1H27B 2W2HA 3MIAB 4JX4A 5CYIB 2CYZB 2IN3A 4BXXX 4EOPB 1AD6A 2DXBB 4II5B 2QQ8A 2ZZDB 4AI6A 4JX5A 1JOWA 4CFXB 1C9BA 1H1QB 1ENWA 3F5XB 3HHTB 1GY3B 1VYWB 3B57A 4CFNB 3HBLA 3LQ5B 4ELJA 1F5QB 3TN8B 4BY7X 4EOLB 2BKZB 1D3UB 4OGRB 1H25B 2WEVB 3QYHB 2ZPBB 4UN0A 4AKGA 4MFDA 1E9HB 1GUXB 3POMA 4BCKB 1UNLD 5L2WB 4HLQA 3QWLA 4EOMB 4F7NB 2EUFA 2CJMB 3QYBA 4FM4B 5BNJB 4NSTB 1OKVB 3PO3S 2WIPB 4ELLA 2G77A 3VYHB 5EJCA 1G3NC 4RODA 4F6UB 4YC3B 1W98B 4BCQB 3X25B 2AHJB 4EOIB 2CCHB 3O0GD 3MY5B 2KMGA 2D0QB 2UUEB 4AKIA 4CFVB 4FX3B 5FGKB 5HNBB 4HNTA 1JSTB 5HBJB 4I3ZB 5LMKB 2I53A 4OB1B 4CRLB 4BCND 4HNUA 1UGPB 1IREB 2DD5B 2QDYB 2WPAB 3KHIA 4BCJB 4F7JB 4CFUD 3TNWB 4MFEA 2R7GA 5LQFB 2PK9B 5HQ0B 5HVYB 4KRCB 1AISB 3VKGA 2C4GB 2PHGA 4EOQB 3DJBA 4TTHA 3DOGB 2LW4A 2DMEA 4BCMD 3MY1B 2C5XB 4F70B 2DD4B 4OR5B 4EOSB 2IW8B 5EFQB 4CFMB 4LOCA 4EOOB 3BG3A 2I40B 5DQVA 2G9XB 3A8MB 2KR6A 2QF7A 3BHVB 3GTMS 4EOJB 2QDJA 1FKMA 2DPPB 1TD6A 4BBSM 1KXUA 4BCNB 1V29B 1N4MA 4HL4A 4EC8B 4BCFB 1UGSB 1PKDB 2ZPEB 3BLRB 3QYGB 4CFUB 2W9FA 3EIDB 1ZP2A 3BHTB 3BLHB 3HB9A 1E7PA 5IDNB 2WHBB 4BBRM 4MIMA 5ICPB 2WMBB 4BCMB 3K7AM 2ZCFB 4EORB 3HO8A 3DTOA 3VKHA 4ROCA 3DL1A 2W99A 4BCIB 5I5ZB 1UNGD 3X24B 2BS4A 1VINA 3RGFB 4ROEA 3TNIB 1VOLA 1FINB 2WMAB 4OB0B 1TFBA 2C5NB 3QXEB 2BPMB 2CZ1B 3H4CA 4OB3B 4Y72B 2C6TB 1H1SB 1URCB 4CXAB 4QSHA 2IW6B 3TW6A 1OGUB 2CZ0B 4OB2B 2W9ZA 2UZBB 3WVDB 1OIUB 4Z6YA 3DDQB 4ZGDB 1AHJB 4YOOA 2WJ9A 2CZ6B 2QFZA 1O9KA 2ZPIB 1JKWA 1O9KB 4BCHB 3X26B 4BCGB 2PJQA 2BS3A 1BU2A 2ZPHB 2CZ7B 1FVVB 3A8HB 3BG9A 1H24B 4F7LB 1OKWB 4F7SB
chains in the Genus database with same CATH topology
2D0QB 2DXCB 3QYGB 4AKIA 4ZGJB 3A8GB 3QZ9B 4ZGEB 3A8LB 1UGRB 2ZPGB 4HNTA 3X20B 3QYEA 3HB9A 3VYGB 3WVEB 1E7PA 2BS2A 3HZJA 4BBRM 4MIMA 4OB1B 3X28B 4HNUA 4JX4A 1UGPB 1IREB 2CYZB 2DD5B 2QDYB 3KHIA 2ZCFB 2DXBB 3HO8A 2QQ8A 3VKHA 2ZZDB 4AI6A 4MFEA 3DL1A 3BG5A 4JX5A 3X24B 3HHTB 2BS4A 4HNVA 2ZPFB 3HBLA 3QZ5B 4ELJA 4OB0B 3VKGA 3QXEB 1QLBA 2CZ1B 3H4CA 4OB3B 2DD4B 3QYHB 2ZPBB 4AKHA 4AKGA 4MFDA 3TW7A 4QSHA 3TW6A 2CZ0B 4OB2B 4HLQA 3WVDB 4LOCA 3BG3A 3QWLA 4Z6YA 3A8MB 4ZGDB 1AHJB 2KR6A 3QYBA 4FM4B 2WJ9A 2QF7A 2QDJA 2CZ6B 2QFZA 4JX6A 2ZPIB 1FKMA 2DPPB 2G77A 4M6VA 3VYHB 4BBSM 5EJCA 3X26B 1V29B 3X25B 2AHJB 2BS3A 3A8OB 2ZPHB 4HL4A 1UGQB 2CZ7B 3A8HB 1UGSB 3BG9A 4NC6A 2KMGA 2ZPEB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2D0Q B;  1IRE B;  3A8M B;  4ZGD B;  2DXC B;  1AHJ B;  2CYZ B;  3QYG B;  4FM4 B;  3QXE B;  2DD5 B;  2CZ6 B;  2QDY B;  2ZCF B;  2DXB B;  3A8G B;  2CZ1 B;  2ZPI B;  4ZGJ B;  2DPP B;  3QZ9 B;  4ZGE B;  3A8L B;  3VYH B;  4OB3 B;  1UGR B;  2ZPG B;  2ZZD B;  2DD4 B;  3X26 B;  3QYH B;  2ZPB B;  3X20 B;  1V29 B;  3X25 B;  2AHJ B;  3A8O B;  2ZPH B;  1UGQ B;  2CZ7 B;  3VYG B;  2CZ0 B;  3HHT B;  4OB2 B;  3WVE B;  3X24 B;  3A8H B;  1UGS B;  2ZPF B;  3WVD B;  4OB1 B;  3QZ5 B;  3X28 B;  4OB0 B;  2ZPE B;  1UGP B; 
#chains in the Genus database with same CATH topology
 1P5E B;  2DXC B;  4ZGJ B;  2C5V B;  3A8G B;  4ZGE B;  2ZPG B;  1UNH D;  3EOC B;  5ACB A;  3QYE A;  4EON B;  2WFY B;  3VYG B;  4F6W B;  2IVX A;  1OL2 B;  2V22 B;  2JGZ B;  3TNH B;  1OI9 B;  3NDQ A;  3BHU B;  3M03 A;  1XO2 A;  1H1P B;  1GUX A;  3BG5 A;  1JSU B;  2UZE B;  1OL1 B;  2B9R A;  2WIH B;  4HNV A;  2ZPF B;  3QZ5 B;  4YOZ A;  1QMZ B;  5IF1 B;  1GH6 B;  1QLB A;  3EJ1 B;  3BLQ B;  2WXV B;  3QHW B;  4AKH A;  2UZL B;  2PK2 A;  3TW7 A;  4KRD B;  5IDP B;  2CCI B;  2IW9 B;  4EOK B;  4G6L B;  2X1N B;  3QHR B;  2PMI B;  1H26 B;  4JX6 A;  2F2C A;  2QGS A;  4M6V A;  1H28 B;  1OIY B;  2UZD B;  4YOS A;  3MI9 B;  2C5O B;  3A8O B;  1H1R B;  4CFW B;  1UGQ B;  3G33 B;  5HBH B;  4NC6 A;  4BCO B;  5HBE B;  1H4L D;  3QZ9 B;  3DDP B;  3A8L B;  4IMY B;  1UGR B;  4F6S B;  2W96 A;  3X20 B;  4EC9 B;  5DQW A;  4BCP B;  4BY1 X;  5IHY A;  3WVE B;  2BS2 A;  3HZJ A;  5CEI B;  4BCQ D;  3X28 B;  1H27 B;  2W2H A;  3MIA B;  4JX4 A;  5CYI B;  2CYZ B;  2IN3 A;  4BXX X;  4EOP B;  1AD6 A;  2DXB B;  4II5 B;  2QQ8 A;  2ZZD B;  4AI6 A;  4JX5 A;  1JOW A;  4CFX B;  1C9B A;  1H1Q B;  1ENW A;  3F5X B;  3HHT B;  1GY3 B;  1VYW B;  3B57 A;  4CFN B;  3HBL A;  3LQ5 B;  4ELJ A;  1F5Q B;  3TN8 B;  4BY7 X;  4EOL B;  2BKZ B;  1D3U B;  4OGR B;  1H25 B;  2WEV B;  3QYH B;  2ZPB B;  4UN0 A;  4AKG A;  4MFD A;  1E9H B;  1GUX B;  3POM A;  4BCK B;  1UNL D;  5L2W B;  4HLQ A;  3QWL A;  4EOM B;  4F7N B;  2EUF A;  2CJM B;  3QYB A;  4FM4 B;  5BNJ B;  4NST B;  1OKV B;  3PO3 S;  2WIP B;  4ELL A;  2G77 A;  3VYH B;  5EJC A;  1G3N C;  4ROD A;  4F6U B;  4YC3 B;  1W98 B;  4BCQ B;  3X25 B;  2AHJ B;  4EOI B;  2CCH B;  3O0G D;  3MY5 B;  2KMG A;  2D0Q B;  2UUE B;  4AKI A;  4CFV B;  4FX3 B;  5FGK B;  5HNB B;  4HNT A;  1JST B;  5HBJ B;  4I3Z B;  5LMK B;  2I53 A;  4OB1 B;  4CRL B;  4BCN D;  4HNU A;  1UGP B;  1IRE B;  2DD5 B;  2QDY B;  2WPA B;  3KHI A;  4BCJ B;  4F7J B;  4CFU D;  3TNW B;  4MFE A;  2R7G A;  5LQF B;  2PK9 B;  5HQ0 B;  5HVY B;  4KRC B;  1AIS B;  3VKG A;  2C4G B;  2PHG A;  4EOQ B;  3DJB A;  4TTH A;  3DOG B;  2LW4 A;  2DME A;  4BCM D;  3MY1 B;  2C5X B;  4F70 B;  2DD4 B;  4OR5 B;  4EOS B;  2IW8 B;  5EFQ B;  4CFM B;  4LOC A;  4EOO B;  3BG3 A;  2I40 B;  5DQV A;  2G9X B;  3A8M B;  2KR6 A;  2QF7 A;  3BHV B;  3GTM S;  4EOJ B;  2QDJ A;  1FKM A;  2DPP B;  1TD6 A;  4BBS M;  1KXU A;  4BCN B;  1V29 B;  1N4M A;  4HL4 A;  4EC8 B;  4BCF B;  1UGS B;  1PKD B;  2ZPE B;  3BLR B;  3QYG B;  4CFU B;  2W9F A;  3EID B;  1ZP2 A;  3BHT B;  3BLH B;  3HB9 A;  1E7P A;  5IDN B;  2WHB B;  4BBR M;  4MIM A;  5ICP B;  2WMB B;  4BCM B;  3K7A M;  2ZCF B;  4EOR B;  3HO8 A;  3DTO A;  3VKH A;  4ROC A;  3DL1 A;  2W99 A;  4BCI B;  5I5Z B;  1UNG D;  3X24 B;  2BS4 A;  1VIN A;  3RGF B;  4ROE A;  3TNI B;  1VOL A;  1FIN B;  2WMA B;  4OB0 B;  1TFB A;  2C5N B;  3QXE B;  2BPM B;  2CZ1 B;  3H4C A;  4OB3 B;  4Y72 B;  2C6T B;  1H1S B;  1URC B;  4CXA B;  4QSH A;  2IW6 B;  3TW6 A;  1OGU B;  2CZ0 B;  4OB2 B;  2W9Z A;  2UZB B;  3WVD B;  1OIU B;  4Z6Y A;  3DDQ B;  4ZGD B;  1AHJ B;  4YOO A;  2WJ9 A;  2CZ6 B;  2QFZ A;  1O9K A;  2ZPI B;  1JKW A;  1O9K B;  4BCH B;  3X26 B;  4BCG B;  2PJQ A;  2BS3 A;  1BU2 A;  2ZPH B;  2CZ7 B;  1FVV B;  3A8H B;  3BG9 A;  1H24 B;  4F7L B;  1OKW B;  4F7S B; 
#chains in the Genus database with same CATH homology
 2D0Q B;  2DXC B;  3QYG B;  4AKI A;  4ZGJ B;  3A8G B;  3QZ9 B;  4ZGE B;  3A8L B;  1UGR B;  2ZPG B;  4HNT A;  3X20 B;  3QYE A;  3HB9 A;  3VYG B;  3WVE B;  1E7P A;  2BS2 A;  3HZJ A;  4BBR M;  4MIM A;  4OB1 B;  3X28 B;  4HNU A;  4JX4 A;  1UGP B;  1IRE B;  2CYZ B;  2DD5 B;  2QDY B;  3KHI A;  2ZCF B;  2DXB B;  3HO8 A;  2QQ8 A;  3VKH A;  2ZZD B;  4AI6 A;  4MFE A;  3DL1 A;  3BG5 A;  4JX5 A;  3X24 B;  3HHT B;  2BS4 A;  4HNV A;  2ZPF B;  3HBL A;  3QZ5 B;  4ELJ A;  4OB0 B;  3VKG A;  3QXE B;  1QLB A;  2CZ1 B;  3H4C A;  4OB3 B;  2DD4 B;  3QYH B;  2ZPB B;  4AKH A;  4AKG A;  4MFD A;  3TW7 A;  4QSH A;  3TW6 A;  2CZ0 B;  4OB2 B;  4HLQ A;  3WVD B;  4LOC A;  3BG3 A;  3QWL A;  4Z6Y A;  3A8M B;  4ZGD B;  1AHJ B;  2KR6 A;  3QYB A;  4FM4 B;  2WJ9 A;  2QF7 A;  2QDJ A;  2CZ6 B;  2QFZ A;  4JX6 A;  2ZPI B;  1FKM A;  2DPP B;  2G77 A;  4M6V A;  3VYH B;  4BBS M;  5EJC A;  3X26 B;  1V29 B;  3X25 B;  2AHJ B;  2BS3 A;  3A8O B;  2ZPH B;  4HL4 A;  1UGQ B;  2CZ7 B;  3A8H B;  1UGS B;  3BG9 A;  4NC6 A;  2KMG A;  2ZPE B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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