3CAZA

Crystal structure of a bar protein from galdieria sulphuraria
Total Genus 77
2040608010012014016018001020304050607080
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
77
sequence length
205
structure length
205
Chain Sequence
SSNMEVEHWMTSLKEVEKVLDSVEPKLTSSGTKWRVVAQHIKDICSDLNQIFNKEDPRYEVVQAGASAAHDFDVRYLDIHKHGREIARLLEKIQKYRQEIEEIKKEYKETDKYRERYDHYKVKLDNLEKKNKDQERIERNQQKFKDAEAAYSSVCADLIQKMETVWKKHVSIFAEAASAVWSTQLQYAKALEAAANPIVPYLQQE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
TIV1 (14-18)TI1 (16-19)AH3 (95-141)TIV2 (17-20)AH1 (22-59)TIV3 (18-22)AH4 (145-206)TIV4 (60-63)TIV5 (61-64)EMPTYAH2 (69-93)TIV6 (142-145)Updating...
connected with : NaN
molecule tags Signaling protein
source organism Galdieria sulphuraria
publication title Crystal structure of a BAR protein from Galdieria sulphuraria.
rcsb
molecule keywords BAR protein
total genus 77
structure length 205
sequence length 205
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-02-20
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1270.60 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak; Chain:A; Domain 2 Arfaptin homology (AH) domain/BAR domain 3cazA00
2D4CA 2D1LA 1I4TA 4NSWA 1ZWWA 2EFKA 3HAJA 2RAIA 5C5BB 1I4LA 4FZSA 3CAZA 3HAHA 3QWEA 4AKVA 2Q12A 3Q84A 3LLLA 3ACOA 2Q13A 2X3VA 4NQIA 4ATMA 2RAJA 3HAIA 2YKTA 4AVMA 4DCNC 3PLTA 3QE6A 4I1QA 1X04A 2ELBA 3OK8A 4WPCA 3Q0KA 2RAKA 4WPEA 2C08A 1WDZA 2EFLA 1I49A 3DYTA 3SYVA 3ABHA 4BNEA 3M3WA 1I4DA 4DYLA 2X3XA 5C5BA 3G9GA 2Z0VA 2X3WA 3I2WA 2Z0NA 2Z0OA 1Y2OA 3QNIA 2V0OA 4H8SA 1X03A 2FICA 3SOGA 1URUA
chains in the Genus database with same CATH superfamily
1TQTA 1DKYA 3O3NB 4JL9A 4EZUA 5TKYA 1R34A 5E84A 3F7WA 3HAIA 1X04A 4R5GA 2F7RA 4B9QA 1GN9A 3VEAA 3DDGA 4AZIA 4EZOA 2Z0NA 3QNIA 3DDFA 1E2UA 2YL9A 3BVUA 4AKVA 4HR1B 2N3KA 3BUBA 3QA8A 3CVRA 1SU8A 3VKHA 4KIKB 2X3XA 4AZ5A 2Z8YA 3GI7A 3VEBA 2X3WA 3I2WA 2Z0OA 1R5EA 2F7QA 2D4CA 2EFKA 3HAJA 5C5BB 3B52X 2ND0A 1ZYLA 1QWUA 2EWFA 4EZVA 2NCZA 1QX1A 3OK8A 2RAKA 2EFLA 1HTYA 2QFFA 4IM2A 2OZNB 4FZPA 4EZWA 3RPMA 3D50A 4IM0A 4IW0A 3BUDA 1I4TA 2GF4A 4FM3A 2OW7A 4NQIA 4UDYX 3KAWA 3DX0A 4EZXA 4AZBA 5FLEX 3T46A 4EZSA 2Z0VA 1TQWA 2QKWA 1MJGA 3BVTA 3ER9B 1HXKA 1TQVA 3Q84A 4FZOA 4AZCA 2JNKA 2YKTA 4H6IA 3T49A 2OBLA 2GA9D 1HWWA 3BVWA 3SYVA 3EJTA 4E3CA 2ALWA 4H6HA 4JWCA 2Q13A 2RAJA 4I1QA 3Q0KA 1I49A 3BUPA 4F00A 1UPXA 3DX1A 4AZ6A 2YL8A 1OAOA 1URUA 3QWEA 1SU6A 1O7DB 2X3VA 5KBPA 2C08A 3I01A 3D4ZA 2PY6A 3BUIA 3EJSA 2FICA 4PO2A 1Y2OA 3BVXA 1TQSA 4M0MA 4HYBA 4EZTA 2LXYA 4IWQA 2F7OA 2FYVA 3T4AG 1GNTA 1JQKA 4WPEA 1YWMA 4AZCB 1W9MA 4EZYA 2EX3B 3EJQA 4AZHA 2RT6A 3RV1A 4NPHA 3L3PA 3I39X 3LLLA 2F18A 1TQUA 1OA0A 2YIBA 3D51A 1E9VA 2YI9A 3DPPA 2WINM 3UITA 3CV5A 4H8SA 4JWIA 4UDXX 2D1LA 3D2FA 4EZPA 3O3MB 2F7PA 3PLTA 2ELBA 2YIAA 4BNEA 3BLBA 1I4DA 3BVVA 4JNFA 3EJRA 4JNEA 3OWGA 1O7DC 2PMRA 1ZWWA 4IM3A 4JLCA 3CZSA 4AZ7A 3EJPA 2F1BA 1SU7A 4WPCA 1WDZA 2KHOA 2X5CA 3ER8C 2YIVX 3T47A 3CAZA 2ZXQA 3CZNA 4AZGA 3DX2A 2OO2A 3QNJA 4DCNC 4R5LA 1U00A 1GNLA 3DX3A 2GAFD 3I04A 2WYHA 2JNSA 3T48A 3FD9A 4EZZA 1E1DA 1DKZA 3L3OM 4F01A 1X03A 3CKDA 1PS3A 2RAIA 1I4LA 2ND1A 3KDRA 4ATMA 3D4YA 1SUFA 3DYTA 3D2EA 1QWNA 3DPOA 3EJUA 3O3OB 3A98A 3B51X 4EZQA 2OBMA 4E81A 2LM0A 3DX4A 3B53X 4FZSA 4R5KA 1LQ7A 4JWDA 4EZNA 3KAVA 4JWEA 3QE6A 2F1AA 4HY9A 3ABHA 2MI7A 4DYLA 3BUQA 2YI8A 3LVTA 3G9GA 2V0OA 4G6QA 4HR1A 4NSWA 1DKXA 5FIGA 2Q12A 2YLAA 3C7NA 3LMFA 3ZEDA 2QXLA 3ACOA 2OW6A 1OA1A 4KIKA 4AVMA 4IWOA 4R5JA 3M3WA 3DPQA 5C5BA 3RV0A 3HAHA 2WYIA 3D52A 3ERCC 4R5IA 4IWPA 2YL5A 2O0I1 4JN4A 4EZRA 3OHXM 4D8JA 1R33A 2YLLA 2YL6A 3SOGA
chains in the Genus database with same CATH topology
2D4CA 2D1LA 1I4TA 4NSWA 1ZWWA 2EFKA 3HAJA 2RAIA 5C5BB 1I4LA 4FZSA 3CAZA 3HAHA 3QWEA 4AKVA 2Q12A 3Q84A 3LLLA 3ACOA 2Q13A 2X3VA 4NQIA 4ATMA 2RAJA 3HAIA 2YKTA 4AVMA 4DCNC 3PLTA 3QE6A 4I1QA 1X04A 2ELBA 3OK8A 4WPCA 3Q0KA 2RAKA 4WPEA 2C08A 1WDZA 2EFLA 1I49A 3DYTA 3SYVA 3ABHA 4BNEA 3M3WA 1I4DA 4DYLA 2X3XA 5C5BA 3G9GA 2Z0VA 2X3WA 3I2WA 2Z0NA 2Z0OA 1Y2OA 3QNIA 2V0OA 4H8SA 1X03A 2FICA 3SOGA 1URUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2D4C A;  2D1L A;  1I4T A;  4NSW A;  1ZWW A;  2EFK A;  3HAJ A;  2RAI A;  5C5B B;  1I4L A;  4FZS A;  3CAZ A;  3HAH A;  3QWE A;  4AKV A;  2Q12 A;  3Q84 A;  3LLL A;  3ACO A;  2Q13 A;  2X3V A;  4NQI A;  4ATM A;  2RAJ A;  3HAI A;  2YKT A;  4AVM A;  4DCN C;  3PLT A;  3QE6 A;  4I1Q A;  1X04 A;  2ELB A;  3OK8 A;  4WPC A;  3Q0K A;  2RAK A;  4WPE A;  2C08 A;  1WDZ A;  2EFL A;  1I49 A;  3DYT A;  3SYV A;  3ABH A;  4BNE A;  3M3W A;  1I4D A;  4DYL A;  2X3X A;  5C5B A;  3G9G A;  2Z0V A;  2X3W A;  3I2W A;  2Z0N A;  2Z0O A;  1Y2O A;  3QNI A;  2V0O A;  4H8S A;  1X03 A;  2FIC A;  3SOG A;  1URU A; 
#chains in the Genus database with same CATH topology
 1TQT A;  1DKY A;  3O3N B;  4JL9 A;  4EZU A;  5TKY A;  1R34 A;  5E84 A;  3F7W A;  3HAI A;  1X04 A;  4R5G A;  2F7R A;  4B9Q A;  1GN9 A;  3VEA A;  3DDG A;  4AZI A;  4EZO A;  2Z0N A;  3QNI A;  3DDF A;  1E2U A;  2YL9 A;  3BVU A;  4AKV A;  4HR1 B;  2N3K A;  3BUB A;  3QA8 A;  3CVR A;  1SU8 A;  3VKH A;  4KIK B;  2X3X A;  4AZ5 A;  2Z8Y A;  3GI7 A;  3VEB A;  2X3W A;  3I2W A;  2Z0O A;  1R5E A;  2F7Q A;  2D4C A;  2EFK A;  3HAJ A;  5C5B B;  3B52 X;  2ND0 A;  1ZYL A;  1QWU A;  2EWF A;  4EZV A;  2NCZ A;  1QX1 A;  3OK8 A;  2RAK A;  2EFL A;  1HTY A;  2QFF A;  4IM2 A;  2OZN B;  4FZP A;  4EZW A;  3RPM A;  3D50 A;  4IM0 A;  4IW0 A;  3BUD A;  1I4T A;  2GF4 A;  4FM3 A;  2OW7 A;  4NQI A;  4UDY X;  3KAW A;  3DX0 A;  4EZX A;  4AZB A;  5FLE X;  3T46 A;  4EZS A;  2Z0V A;  1TQW A;  2QKW A;  1MJG A;  3BVT A;  3ER9 B;  1HXK A;  1TQV A;  3Q84 A;  4FZO A;  4AZC A;  2JNK A;  2YKT A;  4H6I A;  3T49 A;  2OBL A;  2GA9 D;  1HWW A;  3BVW A;  3SYV A;  3EJT A;  4E3C A;  2ALW A;  4H6H A;  4JWC A;  2Q13 A;  2RAJ A;  4I1Q A;  3Q0K A;  1I49 A;  3BUP A;  4F00 A;  1UPX A;  3DX1 A;  4AZ6 A;  2YL8 A;  1OAO A;  1URU A;  3QWE A;  1SU6 A;  1O7D B;  2X3V A;  5KBP A;  2C08 A;  3I01 A;  3D4Z A;  2PY6 A;  3BUI A;  3EJS A;  2FIC A;  4PO2 A;  1Y2O A;  3BVX A;  1TQS A;  4M0M A;  4HYB A;  4EZT A;  2LXY A;  4IWQ A;  2F7O A;  2FYV A;  3T4A G;  1GNT A;  1JQK A;  4WPE A;  1YWM A;  4AZC B;  1W9M A;  4EZY A;  2EX3 B;  3EJQ A;  4AZH A;  2RT6 A;  3RV1 A;  4NPH A;  3L3P A;  3I39 X;  3LLL A;  2F18 A;  1TQU A;  1OA0 A;  2YIB A;  3D51 A;  1E9V A;  2YI9 A;  3DPP A;  2WIN M;  3UIT A;  3CV5 A;  4H8S A;  4JWI A;  4UDX X;  2D1L A;  3D2F A;  4EZP A;  3O3M B;  2F7P A;  3PLT A;  2ELB A;  2YIA A;  4BNE A;  3BLB A;  1I4D A;  3BVV A;  4JNF A;  3EJR A;  4JNE A;  3OWG A;  1O7D C;  2PMR A;  1ZWW A;  4IM3 A;  4JLC A;  3CZS A;  4AZ7 A;  3EJP A;  2F1B A;  1SU7 A;  4WPC A;  1WDZ A;  2KHO A;  2X5C A;  3ER8 C;  2YIV X;  3T47 A;  3CAZ A;  2ZXQ A;  3CZN A;  4AZG A;  3DX2 A;  2OO2 A;  3QNJ A;  4DCN C;  4R5L A;  1U00 A;  1GNL A;  3DX3 A;  2GAF D;  3I04 A;  2WYH A;  2JNS A;  3T48 A;  3FD9 A;  4EZZ A;  1E1D A;  1DKZ A;  3L3O M;  4F01 A;  1X03 A;  3CKD A;  1PS3 A;  2RAI A;  1I4L A;  2ND1 A;  3KDR A;  4ATM A;  3D4Y A;  1SUF A;  3DYT A;  3D2E A;  1QWN A;  3DPO A;  3EJU A;  3O3O B;  3A98 A;  3B51 X;  4EZQ A;  2OBM A;  4E81 A;  2LM0 A;  3DX4 A;  3B53 X;  4FZS A;  4R5K A;  1LQ7 A;  4JWD A;  4EZN A;  3KAV A;  4JWE A;  3QE6 A;  2F1A A;  4HY9 A;  3ABH A;  2MI7 A;  4DYL A;  3BUQ A;  2YI8 A;  3LVT A;  3G9G A;  2V0O A;  4G6Q A;  4HR1 A;  4NSW A;  1DKX A;  5FIG A;  2Q12 A;  2YLA A;  3C7N A;  3LMF A;  3ZED A;  2QXL A;  3ACO A;  2OW6 A;  1OA1 A;  4KIK A;  4AVM A;  4IWO A;  4R5J A;  3M3W A;  3DPQ A;  5C5B A;  3RV0 A;  3HAH A;  2WYI A;  3D52 A;  3ERC C;  4R5I A;  4IWP A;  2YL5 A;  2O0I 1;  4JN4 A;  4EZR A;  3OHX M;  4D8J A;  1R33 A;  2YLL A;  2YL6 A;  3SOG A; 
#chains in the Genus database with same CATH homology
 2D4C A;  2D1L A;  1I4T A;  4NSW A;  1ZWW A;  2EFK A;  3HAJ A;  2RAI A;  5C5B B;  1I4L A;  4FZS A;  3CAZ A;  3HAH A;  3QWE A;  4AKV A;  2Q12 A;  3Q84 A;  3LLL A;  3ACO A;  2Q13 A;  2X3V A;  4NQI A;  4ATM A;  2RAJ A;  3HAI A;  2YKT A;  4AVM A;  4DCN C;  3PLT A;  3QE6 A;  4I1Q A;  1X04 A;  2ELB A;  3OK8 A;  4WPC A;  3Q0K A;  2RAK A;  4WPE A;  2C08 A;  1WDZ A;  2EFL A;  1I49 A;  3DYT A;  3SYV A;  3ABH A;  4BNE A;  3M3W A;  1I4D A;  4DYL A;  2X3X A;  5C5B A;  3G9G A;  2Z0V A;  2X3W A;  3I2W A;  2Z0N A;  2Z0O A;  1Y2O A;  3QNI A;  2V0O A;  4H8S A;  1X03 A;  2FIC A;  3SOG A;  1URU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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