4H6H | Genus

Total Genus 32

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	32
sequence length	79
structure length	79
Chain Sequence	LTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Immune system
source organism	Staphylococcus aureus subsp. aureus
publication title	A Structurally Dynamic N-terminal Helix Is a Key Functional Determinant in Staphylococcal Complement Inhibitor (SCIN) Proteins. pubmed doi rcsb
molecule keywords	Fibrinogen-binding protein
total genus	32
structure length	79
sequence length	79
chains with identical sequence	B, C, D
ec nomenclature
pdb deposition date	2012-09-19

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.1270.10	Mainly Alpha	Up-down Bundle	Substrate Binding Domain Of Dnak; Chain:A; Domain 2	Substrate Binding Domain Of Dnak; Chain:A; Domain 2	4h6hA00

4R5LA 3T49A 1DKYA 3DPOA 4JWIA 3D2EA 3OHXM 1DKZA 3D2FA 4EZNA 4EZOA 4F01A 3DPQA 4JNFA 3T46A 5TKYA 1DKXA 4R5JA 4EZQA 4R5KA 4HY9A 4JWDA 2KHOA 3QNJA 3T4AG 2QFFA 4EZVA 4EZZA 4JNEA 4EZTA 4PO2A 4E81A 4EZSA 4H6IA 4HYBA 4F00A 3T47A 4EZXA 3L3OM 5E84A 4JN4A 4EZPA 3DPPA 4JWCA 1U00A 4B9QA 4EZUA 4EZRA 2WINM 4JWEA 3C7NA 3T48A 4EZYA 4H6HA 4R5GA 4R5IA 4EZWA 2QXLA
chains in the Genus database with same CATH superfamily

4UDYX 2F1BA 3L3PA 3I2WA 1YWMA 3DPQA 2OBLA 3VEBA 4NPHA 2RAKA 1HXKA 1OAOA 3ACOA 1SU6A 2X3VA 3B51X 2GA9D 4EZPA 3BVVA 1R5EA 3KAVA 2F18A 4R5LA 3DPOA 3PLTA 3RPMA 2F7OA 2OW6A 2QFFA 4AZGA 4EZTA 2EX3B 4AZCA 3CZSA 1U00A 4EZUA 4EZRA 3I39X 3B52X 2X5CA 1X04A 1URUA 2YI8A 3EJUA 1QWNA 4JNFA 4R5KA 3QNJA 4I1QA 4F00A 4G6QA 3ERCC 3BVUA 1SU8A 2Z0VA 1QX1A 3HAJA 4R5IA 3QA8A 4AVMA 4F01A 1I4DA 2O0I1 2V0OA 3DX1A 2OZNB 4IM0A 4DCNC 3M3WA 4NQIA 4JWCA 1JQKA 3I04A 3C7NA 2X3XA 2JNSA 2JNKA 2LM0A 2NCZA 4JWIA 4AZBA 1R34A 4AZIA 1QWUA 1ZYLA 2QKWA 3SYVA 4BNEA 2YL5A 3RV0A 2EFKA 4EZSA 3DYTA 3RV1A 2Q13A 1TQSA 2Q12A 1PS3A 1TQVA 2GAFD 1TQWA 4HR1B 2ND1A 4JWDA 2PMRA 3ABHA 1OA1A 4JL9A 4PO2A 3QWEA 5C5BA 4IM3A 3CKDA 3QNIA 2YIAA 2MI7A 3D2FA 3BVTA 2Z0NA 1TQTA 4EZVA 4EZZA 4FZOA 4IWQA 1GN9A 4WPEA 3CAZA 3CV5A 3T48A 3D51A 4WPCA 2C08A 4AZCB 2ALWA 1WDZA 2YI9A 3T46A 1DKXA 2D1LA 4KIKB 3HAIA 3SOGA 1ZWWA 1I49A 3L3OM 4NSWA 3BVXA 3VKHA 2WINM 2YKTA 2EWFA 1R33A 3OHXM 2PY6A 3O3OB 5TKYA 1MJGA 4R5JA 4IWPA 4HY9A 3Q84A 3BUQA 4E81A 2F1AA 2GF4A 4H6IA 3EJTA 1E1DA 2ELBA 1E9VA 2OW7A 4DYLA 2RAIA 3DX0A 4R5GA 1UPXA 1I4TA 3GI7A 3HAHA 3A98A 3O3NB 2YLAA 2X3WA 3KAWA 1SU7A 2FICA 1E2UA 4JWEA 2YL8A 1X03A 3UITA 3B53X 4ATMA 3FD9A 3DDGA 2YL6A 3LVTA 4AZHA 3DX2A 5E84A 3DDFA 3D50A 2ZXQA 3ER8C 2RT6A 4HR1A 3T49A 4EZOA 5C5BB 3BUDA 4AZ5A 1W9MA 5FIGA 4EZQA 4AKVA 3T4AG 3LLLA 3CZNA 3T47A 4FM3A 3EJPA 2Z8YA 4H6HA 2QXLA 3D2EA 4EZNA 3OWGA 1O7DB 4FZPA 2YL9A 3QE6A 3BUBA 2F7RA 4H8SA 2F7QA 3EJQA 3I01A 2WYIA 1HTYA 2D4CA 3EJSA 3CVRA 1O7DC 4KIKA 1OA0A 2YIBA 1HWWA 3G9GA 1SUFA 3VEAA 1DKYA 1GNTA 4AZ6A 3EJRA 1TQUA 3BUIA 1LQ7A 3OK8A 3LMFA 4EZYA 4EZWA 2FYVA 3O3MB 3BLBA 2RAJA 2KHOA 4JNEA 2YLLA 2YIVX 3ER9B 4EZXA 3D4ZA 4IW0A 4JN4A 3DPPA 3Q0KA 2Z0OA 1Y2OA 2ND0A 3DX3A 5KBPA 2F7PA 1DKZA 4D8JA 3D52A 3BVWA 4JLCA 3KDRA 1GNLA 4FZSA 2WYHA 4E3CA 2EFLA 3D4YA 4HYBA 2OBMA 4AZ7A 3DX4A 4IM2A 5FLEX 4B9QA 4M0MA 3ZEDA 3BUPA 3F7WA 2OO2A 2LXYA 4UDXX 4IWOA 2N3KA 1I4LA
chains in the Genus database with same CATH topology

4UDYX 2LM0A 2NCZA 4JWIA 3D2EA 3OHXM 4EZNA 3OWGA 2PY6A 3DPQA 2OBLA 3O3OB 5TKYA 1MJGA 3VEBA 4NPHA 4R5JA 4IWPA 1ZYLA 4HY9A 3RV0A 1OAOA 3I01A 1SU6A 4E81A 4EZSA 4H6IA 3B51X 2GA9D 1E1DA 1E9VA 4EZPA 4KIKA 3RV1A 1OA0A 2YIBA 3KAVA 4R5GA 1SUFA 1UPXA 3VEAA 4R5LA 1DKYA 3DPOA 3GI7A 2GAFD 3A98A 3O3NB 4HR1B 2ND1A 1GNTA 4JWDA 1OA1A 2QFFA 3KAWA 4JL9A 4EZTA 2EX3B 1SU7A 4PO2A 4IM3A 1U00A 1E2UA 4EZUA 4EZRA 2YIAA 4JWEA 3I39X 3B52X 2X5CA 3LMFA 4EZYA 3UITA 4EZWA 3B53X 3FD9A 2YI8A 3O3MB 3D2FA 4JNFA 4R5KA 2KHOA 3QNJA 4EZVA 4EZZA 4JNEA 4IWQA 2YIVX 1GN9A 3ER9B 4F00A 4EZXA 4G6QA 3ERCC 4IW0A 4JN4A 5E84A 3DPPA 3ER8C 1SU8A 2RT6A 4HR1A 2ND0A 3T48A 4R5IA 3QA8A 3T49A 4F01A 1DKZA 4EZOA 2YI9A 4D8JA 3T46A 1DKXA 1W9MA 4JLCA 5FIGA 4EZQA 4KIKB 3KDRA 1GNLA 4IM0A 3T4AG 4E3CA 4HYBA 3T47A 4FM3A 3L3OM 2OBMA 4IM2A 2Z8YA 5FLEX 4JWCA 4B9QA 3VKHA 2WINM 1JQKA 3I04A 4M0MA 3ZEDA 3F7WA 3C7NA 4H6HA 2EWFA 4UDXX 2JNSA 4IWOA 2N3KA 2QXLA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 4R5L A;  3T49 A;  1DKY A;  3DPO A;  4JWI A;  3D2E A;  3OHX M;  1DKZ A;  3D2F A;  4EZN A;  4EZO A;  4F01 A;  3DPQ A;  4JNF A;  3T46 A;  5TKY A;  1DKX A;  4R5J A;  4EZQ A;  4R5K A;  4HY9 A;  4JWD A;  2KHO A;  3QNJ A;  3T4A G;  2QFF A;  4EZV A;  4EZZ A;  4JNE A;  4EZT A;  4PO2 A;  4E81 A;  4EZS A;  4H6I A;  4HYB A;  4F00 A;  3T47 A;  4EZX A;  3L3O M;  5E84 A;  4JN4 A;  4EZP A;  3DPP A;  4JWC A;  1U00 A;  4B9Q A;  4EZU A;  4EZR A;  2WIN M;  4JWE A;  3C7N A;  3T48 A;  4EZY A;  4H6H A;  4R5G A;  4R5I A;  4EZW A;  2QXL A; 
#chains in the Genus database with same CATH topology
 4UDY X;  2F1B A;  3L3P A;  3I2W A;  1YWM A;  3DPQ A;  2OBL A;  3VEB A;  4NPH A;  2RAK A;  1HXK A;  1OAO A;  3ACO A;  1SU6 A;  2X3V A;  3B51 X;  2GA9 D;  4EZP A;  3BVV A;  1R5E A;  3KAV A;  2F18 A;  4R5L A;  3DPO A;  3PLT A;  3RPM A;  2F7O A;  2OW6 A;  2QFF A;  4AZG A;  4EZT A;  2EX3 B;  4AZC A;  3CZS A;  1U00 A;  4EZU A;  4EZR A;  3I39 X;  3B52 X;  2X5C A;  1X04 A;  1URU A;  2YI8 A;  3EJU A;  1QWN A;  4JNF A;  4R5K A;  3QNJ A;  4I1Q A;  4F00 A;  4G6Q A;  3ERC C;  3BVU A;  1SU8 A;  2Z0V A;  1QX1 A;  3HAJ A;  4R5I A;  3QA8 A;  4AVM A;  4F01 A;  1I4D A;  2O0I 1;  2V0O A;  3DX1 A;  2OZN B;  4IM0 A;  4DCN C;  3M3W A;  4NQI A;  4JWC A;  1JQK A;  3I04 A;  3C7N A;  2X3X A;  2JNS A;  2JNK A;  2LM0 A;  2NCZ A;  4JWI A;  4AZB A;  1R34 A;  4AZI A;  1QWU A;  1ZYL A;  2QKW A;  3SYV A;  4BNE A;  2YL5 A;  3RV0 A;  2EFK A;  4EZS A;  3DYT A;  3RV1 A;  2Q13 A;  1TQS A;  2Q12 A;  1PS3 A;  1TQV A;  2GAF D;  1TQW A;  4HR1 B;  2ND1 A;  4JWD A;  2PMR A;  3ABH A;  1OA1 A;  4JL9 A;  4PO2 A;  3QWE A;  5C5B A;  4IM3 A;  3CKD A;  3QNI A;  2YIA A;  2MI7 A;  3D2F A;  3BVT A;  2Z0N A;  1TQT A;  4EZV A;  4EZZ A;  4FZO A;  4IWQ A;  1GN9 A;  4WPE A;  3CAZ A;  3CV5 A;  3T48 A;  3D51 A;  4WPC A;  2C08 A;  4AZC B;  2ALW A;  1WDZ A;  2YI9 A;  3T46 A;  1DKX A;  2D1L A;  4KIK B;  3HAI A;  3SOG A;  1ZWW A;  1I49 A;  3L3O M;  4NSW A;  3BVX A;  3VKH A;  2WIN M;  2YKT A;  2EWF A;  1R33 A;  3OHX M;  2PY6 A;  3O3O B;  5TKY A;  1MJG A;  4R5J A;  4IWP A;  4HY9 A;  3Q84 A;  3BUQ A;  4E81 A;  2F1A A;  2GF4 A;  4H6I A;  3EJT A;  1E1D A;  2ELB A;  1E9V A;  2OW7 A;  4DYL A;  2RAI A;  3DX0 A;  4R5G A;  1UPX A;  1I4T A;  3GI7 A;  3HAH A;  3A98 A;  3O3N B;  2YLA A;  2X3W A;  3KAW A;  1SU7 A;  2FIC A;  1E2U A;  4JWE A;  2YL8 A;  1X03 A;  3UIT A;  3B53 X;  4ATM A;  3FD9 A;  3DDG A;  2YL6 A;  3LVT A;  4AZH A;  3DX2 A;  5E84 A;  3DDF A;  3D50 A;  2ZXQ A;  3ER8 C;  2RT6 A;  4HR1 A;  3T49 A;  4EZO A;  5C5B B;  3BUD A;  4AZ5 A;  1W9M A;  5FIG A;  4EZQ A;  4AKV A;  3T4A G;  3LLL A;  3CZN A;  3T47 A;  4FM3 A;  3EJP A;  2Z8Y A;  4H6H A;  2QXL A;  3D2E A;  4EZN A;  3OWG A;  1O7D B;  4FZP A;  2YL9 A;  3QE6 A;  3BUB A;  2F7R A;  4H8S A;  2F7Q A;  3EJQ A;  3I01 A;  2WYI A;  1HTY A;  2D4C A;  3EJS A;  3CVR A;  1O7D C;  4KIK A;  1OA0 A;  2YIB A;  1HWW A;  3G9G A;  1SUF A;  3VEA A;  1DKY A;  1GNT A;  4AZ6 A;  3EJR A;  1TQU A;  3BUI A;  1LQ7 A;  3OK8 A;  3LMF A;  4EZY A;  4EZW A;  2FYV A;  3O3M B;  3BLB A;  2RAJ A;  2KHO A;  4JNE A;  2YLL A;  2YIV X;  3ER9 B;  4EZX A;  3D4Z A;  4IW0 A;  4JN4 A;  3DPP A;  3Q0K A;  2Z0O A;  1Y2O A;  2ND0 A;  3DX3 A;  5KBP A;  2F7P A;  1DKZ A;  4D8J A;  3D52 A;  3BVW A;  4JLC A;  3KDR A;  1GNL A;  4FZS A;  2WYH A;  4E3C A;  2EFL A;  3D4Y A;  4HYB A;  2OBM A;  4AZ7 A;  3DX4 A;  4IM2 A;  5FLE X;  4B9Q A;  4M0M A;  3ZED A;  3BUP A;  3F7W A;  2OO2 A;  2LXY A;  4UDX X;  4IWO A;  2N3K A;  1I4L A; 
#chains in the Genus database with same CATH homology
 4UDY X;  2LM0 A;  2NCZ A;  4JWI A;  3D2E A;  3OHX M;  4EZN A;  3OWG A;  2PY6 A;  3DPQ A;  2OBL A;  3O3O B;  5TKY A;  1MJG A;  3VEB A;  4NPH A;  4R5J A;  4IWP A;  1ZYL A;  4HY9 A;  3RV0 A;  1OAO A;  3I01 A;  1SU6 A;  4E81 A;  4EZS A;  4H6I A;  3B51 X;  2GA9 D;  1E1D A;  1E9V A;  4EZP A;  4KIK A;  3RV1 A;  1OA0 A;  2YIB A;  3KAV A;  4R5G A;  1SUF A;  1UPX A;  3VEA A;  4R5L A;  1DKY A;  3DPO A;  3GI7 A;  2GAF D;  3A98 A;  3O3N B;  4HR1 B;  2ND1 A;  1GNT A;  4JWD A;  1OA1 A;  2QFF A;  3KAW A;  4JL9 A;  4EZT A;  2EX3 B;  1SU7 A;  4PO2 A;  4IM3 A;  1U00 A;  1E2U A;  4EZU A;  4EZR A;  2YIA A;  4JWE A;  3I39 X;  3B52 X;  2X5C A;  3LMF A;  4EZY A;  3UIT A;  4EZW A;  3B53 X;  3FD9 A;  2YI8 A;  3O3M B;  3D2F A;  4JNF A;  4R5K A;  2KHO A;  3QNJ A;  4EZV A;  4EZZ A;  4JNE A;  4IWQ A;  2YIV X;  1GN9 A;  3ER9 B;  4F00 A;  4EZX A;  4G6Q A;  3ERC C;  4IW0 A;  4JN4 A;  5E84 A;  3DPP A;  3ER8 C;  1SU8 A;  2RT6 A;  4HR1 A;  2ND0 A;  3T48 A;  4R5I A;  3QA8 A;  3T49 A;  4F01 A;  1DKZ A;  4EZO A;  2YI9 A;  4D8J A;  3T46 A;  1DKX A;  1W9M A;  4JLC A;  5FIG A;  4EZQ A;  4KIK B;  3KDR A;  1GNL A;  4IM0 A;  3T4A G;  4E3C A;  4HYB A;  3T47 A;  4FM3 A;  3L3O M;  2OBM A;  4IM2 A;  2Z8Y A;  5FLE X;  4JWC A;  4B9Q A;  3VKH A;  2WIN M;  1JQK A;  3I04 A;  4M0M A;  3ZED A;  3F7W A;  3C7N A;  4H6H A;  2EWF A;  4UDX X;  2JNS A;  4IWO A;  2N3K A;  2QXL A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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4H6HA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN