1CREA

Cardiotoxin ii from taiwan cobra venom, naja naja atra: structure in solution and comparision among homologous cardiotoxins
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
60
structure length
60
Chain Sequence
LKCNKLVPLFYKTCPAGKNLCYKMFMVSNLTVPVKRGCIDVCPKNSALVKYVCCNTDRCN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cardiotoxin
molecule keywords CARDIOTOXIN II
publication title Cardiotoxin II from Taiwan cobra venom, Naja naja atra. Structure in solution and comparison among homologous cardiotoxins.
pubmed rcsb
source organism Naja atra
total genus 4
structure length 60
sequence length 60
ec nomenclature
pdb deposition date 1994-03-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1creA00
2CTXA 1L4WA 3LAQU 1KC4A 1NTXA 1UG4A 1I02A 3U73U 1ERAA 2HLRA 1COEA 1HC9A 1RL5A 2BHIA 2H64B 1NXBA 1FSSB 1RGJA 1MR6A 1TGXA 4BDTB 1HAJA 2MUPA 3ERAA 1HOYA 1KFHA 1NEAA 1JBDA 2PJYC 2HLQA 1W6BA 2H8UA 5EBXA 1NORA 4HQPF 1KL8A 1HC9B 2CRSA 5IMYC 2QJAC 1TXBA 4OM4A 3U74U 4FAOE 1S4YA 3KFDI 1CXOA 2J8BA 1CVOA 1DRSA 1IQ9A 1CDTA 1TXAA 1CREA 2GOOC 2H62D 2MJ4A 4QTIU 3FEVA 4ZQYA 4BIKB 3VTSA 1REWC 2LA1A 1KBTA 2FD6U 2MUOA 4AEAA 1CDSA 1BTEA 2BTXA 1KBSA 2CCXA 1VB0A 2UX2A 1IDHA 2QC1A 1CHVS 2ERAA 3KFDE 3HH7A 1CCQA 1LXHA 5DZ5A 4EY8B 2I9BE 2QJBC 1LX5B 1XT3A 1TFSA 2H64C 2UWRA 1JE9A 4DO8A 2MJYA 2PJYB 1BXPA 2QJ9C 1CDRA 1ES7B 3PLCA 1LXGA 1QM7A 1IDIA 1ZADA 1M9ZA 1G6MA 1QKDA 3EBXA 1KBAA 2H7ZA 3NDSA 4LFTA 4RUDA 2CDXA 2ABXA 1KXIA 3NEQA 1FFJA 1KTZB 1MAHF 2LCRA 1CDQA 1ERGA 1ONJA 2X8BB 1HAAA 2NBTA 1KS6A 2H7ZB 2MFAA 1F94A 1FSCA 1IKCA 1JGKA 1NYUA 1H0JA 1ABTA 1V6PA 2MJ0A 1QKEA 1IJCA 1KU6B 3EVSC 2VLWA 2K3GA 2L5SA 2H62C 1CRFA 1CB9A 1PLOA 3BT1U 5DO6A 1CODA 3BT2U 5IMTD 3NH7A 1CXNA 4OM5A 1LSIA 2CRTA 1B41B 4IYEA 2L03A 4XJJA 3QB4B 5DU1A 1FASA 1NTNA 1LJZA 2JQPA 4FAOC 2GOOB 2H5FA 1YWHA 1IDGA 4P7UA 1FRAA 2MHYA 2JVEA 2N99A 1IDLA 4UY2C 1IK8A 1F8UB 1CTXA 2OFSA 1FF4A 1NYSA 6EBXA
chains in the Genus database with same CATH superfamily
2CTXA 1L4WA 3LAQU 1KC4A 1NTXA 1UG4A 1I02A 3U73U 1ERAA 2HLRA 1COEA 1HC9A 1RL5A 2BHIA 2H64B 1NXBA 1FSSB 1RGJA 1MR6A 1TGXA 4BDTB 1HAJA 2MUPA 3ERAA 1HOYA 1KFHA 1NEAA 1JBDA 2PJYC 2HLQA 1W6BA 2H8UA 5EBXA 1NORA 4HQPF 1KL8A 1HC9B 2CRSA 5IMYC 2QJAC 1TXBA 4OM4A 3U74U 4FAOE 1S4YA 3KFDI 1CXOA 2J8BA 1CVOA 1DRSA 1IQ9A 1CDTA 1TXAA 1CREA 2GOOC 2H62D 2MJ4A 4QTIU 3FEVA 4ZQYA 4BIKB 3VTSA 1REWC 2LA1A 1KBTA 2FD6U 2MUOA 4AEAA 1CDSA 1BTEA 2BTXA 1KBSA 2CCXA 1VB0A 2UX2A 1IDHA 2QC1A 1CHVS 2ERAA 3KFDE 3HH7A 1CCQA 4KSNA 1LXHA 5DZ5A 4EY8B 2I9BE 2QJBC 1LX5B 1XT3A 1TFSA 2H64C 2UWRA 1JE9A 4DO8A 2MJYA 2PJYB 1BXPA 2QJ9C 1CDRA 1ES7B 3PLCA 1LXGA 1QM7A 1IDIA 1ZADA 1M9ZA 1G6MA 1QKDA 3EBXA 1KBAA 2H7ZA 3NDSA 4LFTA 4RUDA 2CDXA 2ABXA 1KXIA 3NEQA 1FFJA 1KTZB 1MAHF 2LCRA 1CDQA 1ERGA 1ONJA 2X8BB 1HAAA 2NBTA 1KS6A 2H7ZB 2MFAA 1F94A 1FSCA 1IKCA 1JGKA 1NYUA 1H0JA 1ABTA 1V6PA 2MJ0A 1QKEA 1IJCA 1KU6B 3EVSC 2VLWA 2K3GA 2L5SA 2H62C 1CRFA 1CB9A 1PLOA 3BT1U 5DO6A 1CODA 3BT2U 5IMTD 3NH7A 1CXNA 4OM5A 1LSIA 2CRTA 1B41B 4IYEA 2L03A 4XJJA 3QB4B 5DU1A 1FASA 1NTNA 1LJZA 2JQPA 4FAOC 2GOOB 2H5FA 1YWHA 1IDGA 4P7UA 1FRAA 2MHYA 2JVEA 2N99A 1IDLA 4UY2C 1IK8A 1F8UB 1CTXA 2OFSA 1FF4A 1NYSA 6EBXA
chains in the Genus database with same CATH topology
2CTXA 1L4WA 3LAQU 1KC4A 1NTXA 1UG4A 1I02A 3U73U 1ERAA 2HLRA 1COEA 1HC9A 1RL5A 2BHIA 2H64B 1NXBA 1FSSB 1RGJA 1MR6A 1TGXA 4BDTB 1HAJA 2MUPA 3ERAA 1HOYA 1KFHA 1NEAA 1JBDA 2PJYC 2HLQA 1W6BA 2H8UA 5EBXA 1NORA 4HQPF 1KL8A 1HC9B 2CRSA 5IMYC 2QJAC 1TXBA 4OM4A 3U74U 4FAOE 1S4YA 3KFDI 1CXOA 2J8BA 1CVOA 1DRSA 1IQ9A 1CDTA 1TXAA 1CREA 2GOOC 2H62D 2MJ4A 4QTIU 3FEVA 4ZQYA 4BIKB 3VTSA 1REWC 2LA1A 1KBTA 2FD6U 2MUOA 4AEAA 1CDSA 1BTEA 2BTXA 1KBSA 2CCXA 1VB0A 2UX2A 1IDHA 2QC1A 1CHVS 2ERAA 3KFDE 3HH7A 1CCQA 4KSNA 1LXHA 5DZ5A 4EY8B 2I9BE 2QJBC 1LX5B 1XT3A 1TFSA 2H64C 2UWRA 1JE9A 4DO8A 2MJYA 2PJYB 1BXPA 2QJ9C 1CDRA 1ES7B 3PLCA 1LXGA 1QM7A 1IDIA 1ZADA 1M9ZA 1G6MA 1QKDA 3EBXA 1KBAA 2H7ZA 3NDSA 4LFTA 4RUDA 2CDXA 2ABXA 1KXIA 3NEQA 1FFJA 1KTZB 1MAHF 2LCRA 1CDQA 1ERGA 1ONJA 2X8BB 1HAAA 2NBTA 1KS6A 2H7ZB 2MFAA 1F94A 1FSCA 1IKCA 1JGKA 1NYUA 1H0JA 1ABTA 1V6PA 2MJ0A 1QKEA 1IJCA 1KU6B 3EVSC 2VLWA 2K3GA 2L5SA 2H62C 1CRFA 1CB9A 1PLOA 3BT1U 5DO6A 1CODA 3BT2U 5IMTD 3NH7A 1CXNA 4OM5A 1LSIA 2CRTA 1B41B 4IYEA 2L03A 4XJJA 3QB4B 5DU1A 1FASA 1NTNA 1LJZA 2JQPA 4FAOC 2GOOB 2H5FA 1YWHA 1IDGA 4P7UA 1FRAA 2MHYA 2JVEA 2N99A 1IDLA 4UY2C 1IK8A 1F8UB 1CTXA 2OFSA 1FF4A 1NYSA 6EBXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CTX A;  1L4W A;  3LAQ U;  1KC4 A;  1NTX A;  1UG4 A;  1I02 A;  3U73 U;  1ERA A;  2HLR A;  1COE A;  1HC9 A;  1RL5 A;  2BHI A;  2H64 B;  1NXB A;  1FSS B;  1RGJ A;  1MR6 A;  1TGX A;  4BDT B;  1HAJ A;  2MUP A;  3ERA A;  1HOY A;  1KFH A;  1NEA A;  1JBD A;  2PJY C;  2HLQ A;  1W6B A;  2H8U A;  5EBX A;  1NOR A;  4HQP F;  1KL8 A;  1HC9 B;  2CRS A;  5IMY C;  2QJA C;  1TXB A;  4OM4 A;  3U74 U;  4FAO E;  1S4Y A;  3KFD I;  1CXO A;  2J8B A;  1CVO A;  1DRS A;  1IQ9 A;  1CDT A;  1TXA A;  1CRE A;  2GOO C;  2H62 D;  2MJ4 A;  4QTI U;  3FEV A;  4ZQY A;  4BIK B;  3VTS A;  1REW C;  2LA1 A;  1KBT A;  2FD6 U;  2MUO A;  4AEA A;  1CDS A;  1BTE A;  2BTX A;  1KBS A;  2CCX A;  1VB0 A;  2UX2 A;  1IDH A;  2QC1 A;  1CHV S;  2ERA A;  3KFD E;  3HH7 A;  1CCQ A;  1LXH A;  5DZ5 A;  4EY8 B;  2I9B E;  2QJB C;  1LX5 B;  1XT3 A;  1TFS A;  2H64 C;  2UWR A;  1JE9 A;  4DO8 A;  2MJY A;  2PJY B;  1BXP A;  2QJ9 C;  1CDR A;  1ES7 B;  3PLC A;  1LXG A;  1QM7 A;  1IDI A;  1ZAD A;  1M9Z A;  1G6M A;  1QKD A;  3EBX A;  1KBA A;  2H7Z A;  3NDS A;  4LFT A;  4RUD A;  2CDX A;  2ABX A;  1KXI A;  3NEQ A;  1FFJ A;  1KTZ B;  1MAH F;  2LCR A;  1CDQ A;  1ERG A;  1ONJ A;  2X8B B;  1HAA A;  2NBT A;  1KS6 A;  2H7Z B;  2MFA A;  1F94 A;  1FSC A;  1IKC A;  1JGK A;  1NYU A;  1H0J A;  1ABT A;  1V6P A;  2MJ0 A;  1QKE A;  1IJC A;  1KU6 B;  3EVS C;  2VLW A;  2K3G A;  2L5S A;  2H62 C;  1CRF A;  1CB9 A;  1PLO A;  3BT1 U;  5DO6 A;  1COD A;  3BT2 U;  5IMT D;  3NH7 A;  1CXN A;  4OM5 A;  1LSI A;  2CRT A;  1B41 B;  4IYE A;  2L03 A;  4XJJ A;  3QB4 B;  5DU1 A;  1FAS A;  1NTN A;  1LJZ A;  2JQP A;  4FAO C;  2GOO B;  2H5F A;  1YWH A;  1IDG A;  4P7U A;  1FRA A;  2MHY A;  2JVE A;  2N99 A;  1IDL A;  4UY2 C;  1IK8 A;  1F8U B;  1CTX A;  2OFS A;  1FF4 A;  1NYS A;  6EBX A; 
#chains in the Genus database with same CATH topology
 2CTX A;  1L4W A;  3LAQ U;  1KC4 A;  1NTX A;  1UG4 A;  1I02 A;  3U73 U;  1ERA A;  2HLR A;  1COE A;  1HC9 A;  1RL5 A;  2BHI A;  2H64 B;  1NXB A;  1FSS B;  1RGJ A;  1MR6 A;  1TGX A;  4BDT B;  1HAJ A;  2MUP A;  3ERA A;  1HOY A;  1KFH A;  1NEA A;  1JBD A;  2PJY C;  2HLQ A;  1W6B A;  2H8U A;  5EBX A;  1NOR A;  4HQP F;  1KL8 A;  1HC9 B;  2CRS A;  5IMY C;  2QJA C;  1TXB A;  4OM4 A;  3U74 U;  4FAO E;  1S4Y A;  3KFD I;  1CXO A;  2J8B A;  1CVO A;  1DRS A;  1IQ9 A;  1CDT A;  1TXA A;  1CRE A;  2GOO C;  2H62 D;  2MJ4 A;  4QTI U;  3FEV A;  4ZQY A;  4BIK B;  3VTS A;  1REW C;  2LA1 A;  1KBT A;  2FD6 U;  2MUO A;  4AEA A;  1CDS A;  1BTE A;  2BTX A;  1KBS A;  2CCX A;  1VB0 A;  2UX2 A;  1IDH A;  2QC1 A;  1CHV S;  2ERA A;  3KFD E;  3HH7 A;  1CCQ A;  4KSN A;  1LXH A;  5DZ5 A;  4EY8 B;  2I9B E;  2QJB C;  1LX5 B;  1XT3 A;  1TFS A;  2H64 C;  2UWR A;  1JE9 A;  4DO8 A;  2MJY A;  2PJY B;  1BXP A;  2QJ9 C;  1CDR A;  1ES7 B;  3PLC A;  1LXG A;  1QM7 A;  1IDI A;  1ZAD A;  1M9Z A;  1G6M A;  1QKD A;  3EBX A;  1KBA A;  2H7Z A;  3NDS A;  4LFT A;  4RUD A;  2CDX A;  2ABX A;  1KXI A;  3NEQ A;  1FFJ A;  1KTZ B;  1MAH F;  2LCR A;  1CDQ A;  1ERG A;  1ONJ A;  2X8B B;  1HAA A;  2NBT A;  1KS6 A;  2H7Z B;  2MFA A;  1F94 A;  1FSC A;  1IKC A;  1JGK A;  1NYU A;  1H0J A;  1ABT A;  1V6P A;  2MJ0 A;  1QKE A;  1IJC A;  1KU6 B;  3EVS C;  2VLW A;  2K3G A;  2L5S A;  2H62 C;  1CRF A;  1CB9 A;  1PLO A;  3BT1 U;  5DO6 A;  1COD A;  3BT2 U;  5IMT D;  3NH7 A;  1CXN A;  4OM5 A;  1LSI A;  2CRT A;  1B41 B;  4IYE A;  2L03 A;  4XJJ A;  3QB4 B;  5DU1 A;  1FAS A;  1NTN A;  1LJZ A;  2JQP A;  4FAO C;  2GOO B;  2H5F A;  1YWH A;  1IDG A;  4P7U A;  1FRA A;  2MHY A;  2JVE A;  2N99 A;  1IDL A;  4UY2 C;  1IK8 A;  1F8U B;  1CTX A;  2OFS A;  1FF4 A;  1NYS A;  6EBX A; 
#chains in the Genus database with same CATH homology
 2CTX A;  1L4W A;  3LAQ U;  1KC4 A;  1NTX A;  1UG4 A;  1I02 A;  3U73 U;  1ERA A;  2HLR A;  1COE A;  1HC9 A;  1RL5 A;  2BHI A;  2H64 B;  1NXB A;  1FSS B;  1RGJ A;  1MR6 A;  1TGX A;  4BDT B;  1HAJ A;  2MUP A;  3ERA A;  1HOY A;  1KFH A;  1NEA A;  1JBD A;  2PJY C;  2HLQ A;  1W6B A;  2H8U A;  5EBX A;  1NOR A;  4HQP F;  1KL8 A;  1HC9 B;  2CRS A;  5IMY C;  2QJA C;  1TXB A;  4OM4 A;  3U74 U;  4FAO E;  1S4Y A;  3KFD I;  1CXO A;  2J8B A;  1CVO A;  1DRS A;  1IQ9 A;  1CDT A;  1TXA A;  1CRE A;  2GOO C;  2H62 D;  2MJ4 A;  4QTI U;  3FEV A;  4ZQY A;  4BIK B;  3VTS A;  1REW C;  2LA1 A;  1KBT A;  2FD6 U;  2MUO A;  4AEA A;  1CDS A;  1BTE A;  2BTX A;  1KBS A;  2CCX A;  1VB0 A;  2UX2 A;  1IDH A;  2QC1 A;  1CHV S;  2ERA A;  3KFD E;  3HH7 A;  1CCQ A;  4KSN A;  1LXH A;  5DZ5 A;  4EY8 B;  2I9B E;  2QJB C;  1LX5 B;  1XT3 A;  1TFS A;  2H64 C;  2UWR A;  1JE9 A;  4DO8 A;  2MJY A;  2PJY B;  1BXP A;  2QJ9 C;  1CDR A;  1ES7 B;  3PLC A;  1LXG A;  1QM7 A;  1IDI A;  1ZAD A;  1M9Z A;  1G6M A;  1QKD A;  3EBX A;  1KBA A;  2H7Z A;  3NDS A;  4LFT A;  4RUD A;  2CDX A;  2ABX A;  1KXI A;  3NEQ A;  1FFJ A;  1KTZ B;  1MAH F;  2LCR A;  1CDQ A;  1ERG A;  1ONJ A;  2X8B B;  1HAA A;  2NBT A;  1KS6 A;  2H7Z B;  2MFA A;  1F94 A;  1FSC A;  1IKC A;  1JGK A;  1NYU A;  1H0J A;  1ABT A;  1V6P A;  2MJ0 A;  1QKE A;  1IJC A;  1KU6 B;  3EVS C;  2VLW A;  2K3G A;  2L5S A;  2H62 C;  1CRF A;  1CB9 A;  1PLO A;  3BT1 U;  5DO6 A;  1COD A;  3BT2 U;  5IMT D;  3NH7 A;  1CXN A;  4OM5 A;  1LSI A;  2CRT A;  1B41 B;  4IYE A;  2L03 A;  4XJJ A;  3QB4 B;  5DU1 A;  1FAS A;  1NTN A;  1LJZ A;  2JQP A;  4FAO C;  2GOO B;  2H5F A;  1YWH A;  1IDG A;  4P7U A;  1FRA A;  2MHY A;  2JVE A;  2N99 A;  1IDL A;  4UY2 C;  1IK8 A;  1F8U B;  1CTX A;  2OFS A;  1FF4 A;  1NYS A;  6EBX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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