1QM7A

X-ray structure of a three-fingered chimeric protein, stability of a structural scaffold
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
61
structure length
61
Chain Sequence
TMCYSHTTTSRAILTNCPGETNCYKKSRRHPPKMVLGRGCGCPTVAPGIKLNCCTTDKCNY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords R-CHII
publication title Stability of a Structural Scaffold Upon Activity Transfer : X-Ray Structure of a Three Fingers Chimeric Protein.
pubmed doi rcsb
source organism Synthetic construct
total genus 10
structure length 61
sequence length 61
ec nomenclature
pdb deposition date 1999-09-21
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1qm7A00
1FASA 2GOOC 2CTXA 2H7ZB 4OM5A 1KC4A 2L03A 2MJ4A 4XJJA 2FD6U 2H7ZA 1NTXA 4UY2C 4HQPF 5EBXA 1COEA 2JQPA 1CB9A 2L5SA 1JGKA 3EVSC 1ES7B 1M9ZA 1KU6B 2NBTA 2QJAC 1CCQA 4AEAA 1HOYA 2PJYB 2ERAA 1NYUA 1KBSA 1KFHA 1IK8A 2JVEA 2CRTA 1JE9A 2MHYA 1I02A 2K3GA 1IKCA 1CDQA 4BDTB 3KFDI 1CTXA 1LJZA 4FAOC 2PJYC 3QB4B 1NYSA 2BTXA 2H5FA 1JBDA 3PLCA 1ZADA 5DU1A 1KTZB 1B41B 1ERGA 2QC1A 2MFAA 1F94A 1KL8A 1FRAA 1ONJA 2QJBC 1FF4A 5DZ5A 1CVOA 4FAOE 2H62C 4RUDA 1NORA 1F8UB 1TXAA 3HH7A 4OM4A 2BHIA 1DRSA 1IDLA 2J8BA 1CHVS 1TXBA 1CDTA 2CDXA 6EBXA 3U73U 1MAHF 3BT2U 1CDSA 1RL5A 2H8UA 3VTSA 1CRFA 2UX2A 4QTIU 4LFTA 2MUOA 1IQ9A 1ABTA 4BIKB 1LXHA 1CXNA 3ERAA 1FSSB 2OFSA 3NH7A 1HC9B 1S4YA 2HLQA 4EY8B 4ZQYA 1REWC 1VB0A 2N99A 3LAQU 1FFJA 1HC9A 1KXIA 1NTNA 1H0JA 1NXBA 4IYEA 1IDHA 1BTEA 1FSCA 2H64C 1LSIA 2HLRA 1UG4A 2LCRA 4DO8A 2H62D 1MR6A 1PLOA 1W6BA 1L4WA 5IMYC 1IJCA 2MJ0A 4P7UA 5DO6A 3U74U 2LA1A 1XT3A 1ERAA 1YWHA 3NDSA 1HAJA 1LX5B 1RGJA 1CREA 1NEAA 2X8BB 1QM7A 1HAAA 2H64B 1CODA 1KBAA 2QJ9C 1BXPA 1KS6A 1QKEA 1TGXA 3KFDE 2ABXA 3BT1U 1TFSA 1LXGA 2VLWA 1V6PA 2CRSA 1CDRA 2GOOB 2I9BE 1G6MA 1QKDA 2CCXA 2MJYA 5IMTD 1KBTA 1IDIA 2MUPA 3FEVA 1CXOA 3NEQA 3EBXA 1IDGA 2UWRA
chains in the Genus database with same CATH superfamily
1FASA 2GOOC 2CTXA 2H7ZB 4OM5A 1KC4A 2L03A 2MJ4A 4XJJA 2FD6U 2H7ZA 1NTXA 4UY2C 4HQPF 5EBXA 1COEA 2JQPA 1CB9A 2L5SA 1JGKA 3EVSC 1ES7B 1M9ZA 1KU6B 2NBTA 2QJAC 1CCQA 4AEAA 1HOYA 2PJYB 2ERAA 1NYUA 1KBSA 1KFHA 1IK8A 2JVEA 2CRTA 1JE9A 2MHYA 1I02A 2K3GA 1IKCA 1CDQA 4BDTB 3KFDI 1CTXA 1LJZA 4FAOC 2PJYC 3QB4B 1NYSA 2BTXA 2H5FA 1JBDA 3PLCA 1ZADA 5DU1A 1KTZB 1B41B 1ERGA 2QC1A 2MFAA 1F94A 1KL8A 1FRAA 1ONJA 2QJBC 1FF4A 5DZ5A 1CVOA 4FAOE 2H62C 4RUDA 1NORA 1F8UB 1TXAA 3HH7A 4OM4A 2BHIA 1DRSA 1IDLA 2J8BA 1CHVS 1TXBA 1CDTA 2CDXA 6EBXA 3U73U 1MAHF 3BT2U 1CDSA 1RL5A 2H8UA 3VTSA 1CRFA 2UX2A 4QTIU 4LFTA 2MUOA 1IQ9A 1ABTA 4BIKB 1LXHA 1CXNA 3ERAA 1FSSB 2OFSA 3NH7A 1HC9B 1S4YA 2HLQA 4EY8B 4ZQYA 1REWC 1VB0A 2N99A 3LAQU 1FFJA 1HC9A 1KXIA 1NTNA 1H0JA 1NXBA 4IYEA 1IDHA 1BTEA 1FSCA 2H64C 1LSIA 2HLRA 1UG4A 2LCRA 4DO8A 2H62D 1MR6A 1PLOA 1W6BA 1L4WA 5IMYC 1IJCA 2MJ0A 4P7UA 5DO6A 3U74U 2LA1A 1XT3A 1ERAA 1YWHA 3NDSA 1HAJA 1LX5B 1RGJA 1CREA 1NEAA 2X8BB 1QM7A 4KSNA 1HAAA 2H64B 1CODA 1KBAA 2QJ9C 1BXPA 1KS6A 1QKEA 1TGXA 3KFDE 2ABXA 3BT1U 1TFSA 1LXGA 2VLWA 1V6PA 2CRSA 1CDRA 2GOOB 2I9BE 1G6MA 1QKDA 2CCXA 2MJYA 5IMTD 1KBTA 1IDIA 2MUPA 3FEVA 1CXOA 3NEQA 3EBXA 1IDGA 2UWRA
chains in the Genus database with same CATH topology
1FASA 2GOOC 2CTXA 2H7ZB 4OM5A 1KC4A 2L03A 2MJ4A 4XJJA 2FD6U 2H7ZA 1NTXA 4UY2C 4HQPF 5EBXA 1COEA 2JQPA 1CB9A 2L5SA 1JGKA 3EVSC 1ES7B 1M9ZA 1KU6B 2NBTA 2QJAC 1CCQA 4AEAA 1HOYA 2PJYB 2ERAA 1NYUA 1KBSA 1KFHA 1IK8A 2JVEA 2CRTA 1JE9A 2MHYA 1I02A 2K3GA 1IKCA 1CDQA 4BDTB 3KFDI 1CTXA 1LJZA 4FAOC 2PJYC 3QB4B 1NYSA 2BTXA 2H5FA 1JBDA 3PLCA 1ZADA 5DU1A 1KTZB 1B41B 1ERGA 2QC1A 2MFAA 1F94A 1KL8A 1FRAA 1ONJA 2QJBC 1FF4A 5DZ5A 1CVOA 4FAOE 2H62C 4RUDA 1NORA 1F8UB 1TXAA 3HH7A 4OM4A 2BHIA 1DRSA 1IDLA 2J8BA 1CHVS 1TXBA 1CDTA 2CDXA 6EBXA 3U73U 1MAHF 3BT2U 1CDSA 1RL5A 2H8UA 3VTSA 1CRFA 2UX2A 4QTIU 4LFTA 2MUOA 1IQ9A 1ABTA 4BIKB 1LXHA 1CXNA 3ERAA 1FSSB 2OFSA 3NH7A 1HC9B 1S4YA 2HLQA 4EY8B 4ZQYA 1REWC 1VB0A 2N99A 3LAQU 1FFJA 1HC9A 1KXIA 1NTNA 1H0JA 1NXBA 4IYEA 1IDHA 1BTEA 1FSCA 2H64C 1LSIA 2HLRA 1UG4A 2LCRA 4DO8A 2H62D 1MR6A 1PLOA 1W6BA 1L4WA 5IMYC 1IJCA 2MJ0A 4P7UA 5DO6A 3U74U 2LA1A 1XT3A 1ERAA 1YWHA 3NDSA 1HAJA 1LX5B 1RGJA 1CREA 1NEAA 2X8BB 1QM7A 4KSNA 1HAAA 2H64B 1CODA 1KBAA 2QJ9C 1BXPA 1KS6A 1QKEA 1TGXA 3KFDE 2ABXA 3BT1U 1TFSA 1LXGA 2VLWA 1V6PA 2CRSA 1CDRA 2GOOB 2I9BE 1G6MA 1QKDA 2CCXA 2MJYA 5IMTD 1KBTA 1IDIA 2MUPA 3FEVA 1CXOA 3NEQA 3EBXA 1IDGA 2UWRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FAS A;  2GOO C;  2CTX A;  2H7Z B;  4OM5 A;  1KC4 A;  2L03 A;  2MJ4 A;  4XJJ A;  2FD6 U;  2H7Z A;  1NTX A;  4UY2 C;  4HQP F;  5EBX A;  1COE A;  2JQP A;  1CB9 A;  2L5S A;  1JGK A;  3EVS C;  1ES7 B;  1M9Z A;  1KU6 B;  2NBT A;  2QJA C;  1CCQ A;  4AEA A;  1HOY A;  2PJY B;  2ERA A;  1NYU A;  1KBS A;  1KFH A;  1IK8 A;  2JVE A;  2CRT A;  1JE9 A;  2MHY A;  1I02 A;  2K3G A;  1IKC A;  1CDQ A;  4BDT B;  3KFD I;  1CTX A;  1LJZ A;  4FAO C;  2PJY C;  3QB4 B;  1NYS A;  2BTX A;  2H5F A;  1JBD A;  3PLC A;  1ZAD A;  5DU1 A;  1KTZ B;  1B41 B;  1ERG A;  2QC1 A;  2MFA A;  1F94 A;  1KL8 A;  1FRA A;  1ONJ A;  2QJB C;  1FF4 A;  5DZ5 A;  1CVO A;  4FAO E;  2H62 C;  4RUD A;  1NOR A;  1F8U B;  1TXA A;  3HH7 A;  4OM4 A;  2BHI A;  1DRS A;  1IDL A;  2J8B A;  1CHV S;  1TXB A;  1CDT A;  2CDX A;  6EBX A;  3U73 U;  1MAH F;  3BT2 U;  1CDS A;  1RL5 A;  2H8U A;  3VTS A;  1CRF A;  2UX2 A;  4QTI U;  4LFT A;  2MUO A;  1IQ9 A;  1ABT A;  4BIK B;  1LXH A;  1CXN A;  3ERA A;  1FSS B;  2OFS A;  3NH7 A;  1HC9 B;  1S4Y A;  2HLQ A;  4EY8 B;  4ZQY A;  1REW C;  1VB0 A;  2N99 A;  3LAQ U;  1FFJ A;  1HC9 A;  1KXI A;  1NTN A;  1H0J A;  1NXB A;  4IYE A;  1IDH A;  1BTE A;  1FSC A;  2H64 C;  1LSI A;  2HLR A;  1UG4 A;  2LCR A;  4DO8 A;  2H62 D;  1MR6 A;  1PLO A;  1W6B A;  1L4W A;  5IMY C;  1IJC A;  2MJ0 A;  4P7U A;  5DO6 A;  3U74 U;  2LA1 A;  1XT3 A;  1ERA A;  1YWH A;  3NDS A;  1HAJ A;  1LX5 B;  1RGJ A;  1CRE A;  1NEA A;  2X8B B;  1QM7 A;  1HAA A;  2H64 B;  1COD A;  1KBA A;  2QJ9 C;  1BXP A;  1KS6 A;  1QKE A;  1TGX A;  3KFD E;  2ABX A;  3BT1 U;  1TFS A;  1LXG A;  2VLW A;  1V6P A;  2CRS A;  1CDR A;  2GOO B;  2I9B E;  1G6M A;  1QKD A;  2CCX A;  2MJY A;  5IMT D;  1KBT A;  1IDI A;  2MUP A;  3FEV A;  1CXO A;  3NEQ A;  3EBX A;  1IDG A;  2UWR A; 
#chains in the Genus database with same CATH topology
 1FAS A;  2GOO C;  2CTX A;  2H7Z B;  4OM5 A;  1KC4 A;  2L03 A;  2MJ4 A;  4XJJ A;  2FD6 U;  2H7Z A;  1NTX A;  4UY2 C;  4HQP F;  5EBX A;  1COE A;  2JQP A;  1CB9 A;  2L5S A;  1JGK A;  3EVS C;  1ES7 B;  1M9Z A;  1KU6 B;  2NBT A;  2QJA C;  1CCQ A;  4AEA A;  1HOY A;  2PJY B;  2ERA A;  1NYU A;  1KBS A;  1KFH A;  1IK8 A;  2JVE A;  2CRT A;  1JE9 A;  2MHY A;  1I02 A;  2K3G A;  1IKC A;  1CDQ A;  4BDT B;  3KFD I;  1CTX A;  1LJZ A;  4FAO C;  2PJY C;  3QB4 B;  1NYS A;  2BTX A;  2H5F A;  1JBD A;  3PLC A;  1ZAD A;  5DU1 A;  1KTZ B;  1B41 B;  1ERG A;  2QC1 A;  2MFA A;  1F94 A;  1KL8 A;  1FRA A;  1ONJ A;  2QJB C;  1FF4 A;  5DZ5 A;  1CVO A;  4FAO E;  2H62 C;  4RUD A;  1NOR A;  1F8U B;  1TXA A;  3HH7 A;  4OM4 A;  2BHI A;  1DRS A;  1IDL A;  2J8B A;  1CHV S;  1TXB A;  1CDT A;  2CDX A;  6EBX A;  3U73 U;  1MAH F;  3BT2 U;  1CDS A;  1RL5 A;  2H8U A;  3VTS A;  1CRF A;  2UX2 A;  4QTI U;  4LFT A;  2MUO A;  1IQ9 A;  1ABT A;  4BIK B;  1LXH A;  1CXN A;  3ERA A;  1FSS B;  2OFS A;  3NH7 A;  1HC9 B;  1S4Y A;  2HLQ A;  4EY8 B;  4ZQY A;  1REW C;  1VB0 A;  2N99 A;  3LAQ U;  1FFJ A;  1HC9 A;  1KXI A;  1NTN A;  1H0J A;  1NXB A;  4IYE A;  1IDH A;  1BTE A;  1FSC A;  2H64 C;  1LSI A;  2HLR A;  1UG4 A;  2LCR A;  4DO8 A;  2H62 D;  1MR6 A;  1PLO A;  1W6B A;  1L4W A;  5IMY C;  1IJC A;  2MJ0 A;  4P7U A;  5DO6 A;  3U74 U;  2LA1 A;  1XT3 A;  1ERA A;  1YWH A;  3NDS A;  1HAJ A;  1LX5 B;  1RGJ A;  1CRE A;  1NEA A;  2X8B B;  1QM7 A;  4KSN A;  1HAA A;  2H64 B;  1COD A;  1KBA A;  2QJ9 C;  1BXP A;  1KS6 A;  1QKE A;  1TGX A;  3KFD E;  2ABX A;  3BT1 U;  1TFS A;  1LXG A;  2VLW A;  1V6P A;  2CRS A;  1CDR A;  2GOO B;  2I9B E;  1G6M A;  1QKD A;  2CCX A;  2MJY A;  5IMT D;  1KBT A;  1IDI A;  2MUP A;  3FEV A;  1CXO A;  3NEQ A;  3EBX A;  1IDG A;  2UWR A; 
#chains in the Genus database with same CATH homology
 1FAS A;  2GOO C;  2CTX A;  2H7Z B;  4OM5 A;  1KC4 A;  2L03 A;  2MJ4 A;  4XJJ A;  2FD6 U;  2H7Z A;  1NTX A;  4UY2 C;  4HQP F;  5EBX A;  1COE A;  2JQP A;  1CB9 A;  2L5S A;  1JGK A;  3EVS C;  1ES7 B;  1M9Z A;  1KU6 B;  2NBT A;  2QJA C;  1CCQ A;  4AEA A;  1HOY A;  2PJY B;  2ERA A;  1NYU A;  1KBS A;  1KFH A;  1IK8 A;  2JVE A;  2CRT A;  1JE9 A;  2MHY A;  1I02 A;  2K3G A;  1IKC A;  1CDQ A;  4BDT B;  3KFD I;  1CTX A;  1LJZ A;  4FAO C;  2PJY C;  3QB4 B;  1NYS A;  2BTX A;  2H5F A;  1JBD A;  3PLC A;  1ZAD A;  5DU1 A;  1KTZ B;  1B41 B;  1ERG A;  2QC1 A;  2MFA A;  1F94 A;  1KL8 A;  1FRA A;  1ONJ A;  2QJB C;  1FF4 A;  5DZ5 A;  1CVO A;  4FAO E;  2H62 C;  4RUD A;  1NOR A;  1F8U B;  1TXA A;  3HH7 A;  4OM4 A;  2BHI A;  1DRS A;  1IDL A;  2J8B A;  1CHV S;  1TXB A;  1CDT A;  2CDX A;  6EBX A;  3U73 U;  1MAH F;  3BT2 U;  1CDS A;  1RL5 A;  2H8U A;  3VTS A;  1CRF A;  2UX2 A;  4QTI U;  4LFT A;  2MUO A;  1IQ9 A;  1ABT A;  4BIK B;  1LXH A;  1CXN A;  3ERA A;  1FSS B;  2OFS A;  3NH7 A;  1HC9 B;  1S4Y A;  2HLQ A;  4EY8 B;  4ZQY A;  1REW C;  1VB0 A;  2N99 A;  3LAQ U;  1FFJ A;  1HC9 A;  1KXI A;  1NTN A;  1H0J A;  1NXB A;  4IYE A;  1IDH A;  1BTE A;  1FSC A;  2H64 C;  1LSI A;  2HLR A;  1UG4 A;  2LCR A;  4DO8 A;  2H62 D;  1MR6 A;  1PLO A;  1W6B A;  1L4W A;  5IMY C;  1IJC A;  2MJ0 A;  4P7U A;  5DO6 A;  3U74 U;  2LA1 A;  1XT3 A;  1ERA A;  1YWH A;  3NDS A;  1HAJ A;  1LX5 B;  1RGJ A;  1CRE A;  1NEA A;  2X8B B;  1QM7 A;  4KSN A;  1HAA A;  2H64 B;  1COD A;  1KBA A;  2QJ9 C;  1BXP A;  1KS6 A;  1QKE A;  1TGX A;  3KFD E;  2ABX A;  3BT1 U;  1TFS A;  1LXG A;  2VLW A;  1V6P A;  2CRS A;  1CDR A;  2GOO B;  2I9B E;  1G6M A;  1QKD A;  2CCX A;  2MJY A;  5IMT D;  1KBT A;  1IDI A;  2MUP A;  3FEV A;  1CXO A;  3NEQ A;  3EBX A;  1IDG A;  2UWR A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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