1HC9B

Alpha-bungarotoxin complexed with high affinity peptide
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
74
structure length
74
Chain Sequence
IVCHTTATSPISAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCCSTDKCNPHPKQRPG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin/peptide
molecule keywords ALPHA-BUNGAROTOXIN ISOFORM V31
publication title The Binding Site of Acetylcholine Receptor as Visualized in the X-Ray Structure of a Complex between Alpha-Bungarotoxin and a Mimotope Peptide.
pubmed doi rcsb
total genus 11
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2001-05-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1hc9B00
3KFDE 1L4WA 1IKCA 1VB0A 2CRSA 1CODA 1NTXA 4FAOE 3FEVA 3ERAA 1KXIA 2HLRA 3U73U 1KFHA 1HOYA 1XT3A 1F94A 1MR6A 2QC1A 1CHVS 4BIKB 1CDQA 1IQ9A 1ZADA 1NYUA 2QJBC 1HC9A 1IDIA 1LJZA 4EY8B 4ZQYA 1JBDA 2L03A 2X8BB 1CREA 2H62C 4XJJA 1NXBA 1HC9B 1RL5A 2FD6U 2MJ0A 1IDLA 1KS6A 2H8UA 1ERAA 1KL8A 1JE9A 2NBTA 1KBAA 1KTZB 2N99A 1IK8A 1QKDA 5EBXA 1ERGA 1V6PA 3BT1U 1CXOA 2MUOA 1CDTA 1FSSB 1G6MA 1CTXA 1CDRA 1QM7A 2GOOC 1NTNA 5DO6A 4BDTB 2MFAA 1KU6B 2UWRA 1FASA 1LSIA 1PLOA 2JVEA 2GOOB 1CCQA 3NH7A 4DO8A 1KBSA 5IMYC 3LAQU 4HQPF 1KBTA 1FFJA 2CDXA 4P7UA 1NEAA 3VTSA 1IJCA 2K3GA 3PLCA 1LXHA 3BT2U 1IDHA 5IMTD 4LFTA 3U74U 2PJYC 2OFSA 1TGXA 6EBXA 1NORA 1CVOA 2I9BE 1KC4A 2PJYB 2L5SA 1CRFA 1M9ZA 2UX2A 2CRTA 2MJ4A 4FAOC 2CTXA 1BXPA 1B41B 3NDSA 1FSCA 1HAAA 1LX5B 2CCXA 1S4YA 1COEA 1HAJA 1BTEA 2H7ZA 1REWC 1TXAA 2HLQA 1RGJA 1MAHF 2QJAC 2ERAA 2BHIA 1JGKA 3EVSC 2H7ZB 1CB9A 1ONJA 1NYSA 4OM4A 5DZ5A 1ES7B 1CXNA 3NEQA 2H64B 4UY2C 2JQPA 1LXGA 1DRSA 1TFSA 4IYEA 3EBXA 1UG4A 2ABXA 3KFDI 4OM5A 1FF4A 1H0JA 3HH7A 5DU1A 2LA1A 1W6BA 1ABTA 1QKEA 3QB4B 1CDSA 2J8BA 2MHYA 2BTXA 1FRAA 1TXBA 2H62D 1YWHA 4QTIU 2MUPA 1IDGA 2H5FA 2VLWA 2LCRA 1I02A 4AEAA 1F8UB 4RUDA 2H64C 2MJYA 2QJ9C
chains in the Genus database with same CATH superfamily
3KFDE 1L4WA 1IKCA 1VB0A 2CRSA 1CODA 1NTXA 4FAOE 3FEVA 3ERAA 1KXIA 2HLRA 3U73U 1KFHA 1HOYA 1XT3A 1F94A 1MR6A 2QC1A 1CHVS 4BIKB 1CDQA 1IQ9A 1ZADA 1NYUA 2QJBC 1HC9A 1IDIA 1LJZA 4EY8B 4ZQYA 1JBDA 2L03A 2X8BB 1CREA 2H62C 4XJJA 1NXBA 1HC9B 1RL5A 2FD6U 2MJ0A 1IDLA 1KS6A 2H8UA 1ERAA 1KL8A 1JE9A 2NBTA 1KBAA 1KTZB 2N99A 1IK8A 1QKDA 5EBXA 1ERGA 1V6PA 3BT1U 1CXOA 2MUOA 1CDTA 1FSSB 1G6MA 1CTXA 1CDRA 1QM7A 2GOOC 1NTNA 5DO6A 4BDTB 2MFAA 1KU6B 2UWRA 1FASA 1LSIA 1PLOA 2JVEA 2GOOB 1CCQA 3NH7A 4DO8A 1KBSA 5IMYC 3LAQU 4HQPF 1KBTA 1FFJA 2CDXA 4P7UA 1NEAA 3VTSA 1IJCA 2K3GA 3PLCA 1LXHA 3BT2U 1IDHA 5IMTD 4LFTA 3U74U 2PJYC 2OFSA 1TGXA 6EBXA 1NORA 1CVOA 2I9BE 1KC4A 2PJYB 2L5SA 1CRFA 1M9ZA 2UX2A 2CRTA 2MJ4A 4FAOC 2CTXA 1BXPA 1B41B 3NDSA 1FSCA 1HAAA 1LX5B 2CCXA 1S4YA 1COEA 1HAJA 1BTEA 2H7ZA 1REWC 1TXAA 2HLQA 1RGJA 1MAHF 2QJAC 2ERAA 2BHIA 1JGKA 3EVSC 2H7ZB 1CB9A 1ONJA 1NYSA 4OM4A 5DZ5A 1ES7B 1CXNA 3NEQA 2H64B 4UY2C 2JQPA 1LXGA 1DRSA 1TFSA 4IYEA 3EBXA 1UG4A 2ABXA 3KFDI 4OM5A 1FF4A 1H0JA 3HH7A 5DU1A 2LA1A 1W6BA 1ABTA 1QKEA 3QB4B 1CDSA 2J8BA 2MHYA 2BTXA 1FRAA 1TXBA 2H62D 1YWHA 4QTIU 2MUPA 1IDGA 2H5FA 2VLWA 2LCRA 1I02A 4AEAA 1F8UB 4RUDA 2H64C 2MJYA 2QJ9C 4KSNA
chains in the Genus database with same CATH topology
3KFDE 1L4WA 1IKCA 1VB0A 2CRSA 1CODA 1NTXA 4FAOE 3FEVA 3ERAA 1KXIA 2HLRA 3U73U 1KFHA 1HOYA 1XT3A 1F94A 1MR6A 2QC1A 1CHVS 4BIKB 1CDQA 1IQ9A 1ZADA 1NYUA 2QJBC 1HC9A 1IDIA 1LJZA 4EY8B 4ZQYA 1JBDA 2L03A 2X8BB 1CREA 2H62C 4XJJA 1NXBA 1HC9B 1RL5A 2FD6U 2MJ0A 1IDLA 1KS6A 2H8UA 1ERAA 1KL8A 1JE9A 2NBTA 1KBAA 1KTZB 2N99A 1IK8A 1QKDA 5EBXA 1ERGA 1V6PA 3BT1U 1CXOA 2MUOA 1CDTA 1FSSB 1G6MA 1CTXA 1CDRA 1QM7A 2GOOC 1NTNA 5DO6A 4BDTB 2MFAA 1KU6B 2UWRA 1FASA 1LSIA 1PLOA 2JVEA 2GOOB 1CCQA 3NH7A 4DO8A 1KBSA 5IMYC 3LAQU 4HQPF 1KBTA 1FFJA 2CDXA 4P7UA 1NEAA 3VTSA 1IJCA 2K3GA 3PLCA 1LXHA 3BT2U 1IDHA 5IMTD 4LFTA 3U74U 2PJYC 2OFSA 1TGXA 6EBXA 1NORA 1CVOA 2I9BE 1KC4A 2PJYB 2L5SA 1CRFA 1M9ZA 2UX2A 2CRTA 2MJ4A 4FAOC 2CTXA 1BXPA 1B41B 3NDSA 1FSCA 1HAAA 1LX5B 2CCXA 1S4YA 1COEA 1HAJA 1BTEA 2H7ZA 1REWC 1TXAA 2HLQA 1RGJA 1MAHF 2QJAC 2ERAA 2BHIA 1JGKA 3EVSC 2H7ZB 1CB9A 1ONJA 1NYSA 4OM4A 5DZ5A 1ES7B 1CXNA 3NEQA 2H64B 4UY2C 2JQPA 1LXGA 1DRSA 1TFSA 4IYEA 3EBXA 1UG4A 2ABXA 3KFDI 4OM5A 1FF4A 1H0JA 3HH7A 5DU1A 2LA1A 1W6BA 1ABTA 1QKEA 3QB4B 1CDSA 2J8BA 2MHYA 2BTXA 1FRAA 1TXBA 2H62D 1YWHA 4QTIU 2MUPA 1IDGA 2H5FA 2VLWA 2LCRA 1I02A 4AEAA 1F8UB 4RUDA 2H64C 2MJYA 2QJ9C 4KSNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KFD E;  1L4W A;  1IKC A;  1VB0 A;  2CRS A;  1COD A;  1NTX A;  4FAO E;  3FEV A;  3ERA A;  1KXI A;  2HLR A;  3U73 U;  1KFH A;  1HOY A;  1XT3 A;  1F94 A;  1MR6 A;  2QC1 A;  1CHV S;  4BIK B;  1CDQ A;  1IQ9 A;  1ZAD A;  1NYU A;  2QJB C;  1HC9 A;  1IDI A;  1LJZ A;  4EY8 B;  4ZQY A;  1JBD A;  2L03 A;  2X8B B;  1CRE A;  2H62 C;  4XJJ A;  1NXB A;  1HC9 B;  1RL5 A;  2FD6 U;  2MJ0 A;  1IDL A;  1KS6 A;  2H8U A;  1ERA A;  1KL8 A;  1JE9 A;  2NBT A;  1KBA A;  1KTZ B;  2N99 A;  1IK8 A;  1QKD A;  5EBX A;  1ERG A;  1V6P A;  3BT1 U;  1CXO A;  2MUO A;  1CDT A;  1FSS B;  1G6M A;  1CTX A;  1CDR A;  1QM7 A;  2GOO C;  1NTN A;  5DO6 A;  4BDT B;  2MFA A;  1KU6 B;  2UWR A;  1FAS A;  1LSI A;  1PLO A;  2JVE A;  2GOO B;  1CCQ A;  3NH7 A;  4DO8 A;  1KBS A;  5IMY C;  3LAQ U;  4HQP F;  1KBT A;  1FFJ A;  2CDX A;  4P7U A;  1NEA A;  3VTS A;  1IJC A;  2K3G A;  3PLC A;  1LXH A;  3BT2 U;  1IDH A;  5IMT D;  4LFT A;  3U74 U;  2PJY C;  2OFS A;  1TGX A;  6EBX A;  1NOR A;  1CVO A;  2I9B E;  1KC4 A;  2PJY B;  2L5S A;  1CRF A;  1M9Z A;  2UX2 A;  2CRT A;  2MJ4 A;  4FAO C;  2CTX A;  1BXP A;  1B41 B;  3NDS A;  1FSC A;  1HAA A;  1LX5 B;  2CCX A;  1S4Y A;  1COE A;  1HAJ A;  1BTE A;  2H7Z A;  1REW C;  1TXA A;  2HLQ A;  1RGJ A;  1MAH F;  2QJA C;  2ERA A;  2BHI A;  1JGK A;  3EVS C;  2H7Z B;  1CB9 A;  1ONJ A;  1NYS A;  4OM4 A;  5DZ5 A;  1ES7 B;  1CXN A;  3NEQ A;  2H64 B;  4UY2 C;  2JQP A;  1LXG A;  1DRS A;  1TFS A;  4IYE A;  3EBX A;  1UG4 A;  2ABX A;  3KFD I;  4OM5 A;  1FF4 A;  1H0J A;  3HH7 A;  5DU1 A;  2LA1 A;  1W6B A;  1ABT A;  1QKE A;  3QB4 B;  1CDS A;  2J8B A;  2MHY A;  2BTX A;  1FRA A;  1TXB A;  2H62 D;  1YWH A;  4QTI U;  2MUP A;  1IDG A;  2H5F A;  2VLW A;  2LCR A;  1I02 A;  4AEA A;  1F8U B;  4RUD A;  2H64 C;  2MJY A;  2QJ9 C; 
#chains in the Genus database with same CATH topology
 3KFD E;  1L4W A;  1IKC A;  1VB0 A;  2CRS A;  1COD A;  1NTX A;  4FAO E;  3FEV A;  3ERA A;  1KXI A;  2HLR A;  3U73 U;  1KFH A;  1HOY A;  1XT3 A;  1F94 A;  1MR6 A;  2QC1 A;  1CHV S;  4BIK B;  1CDQ A;  1IQ9 A;  1ZAD A;  1NYU A;  2QJB C;  1HC9 A;  1IDI A;  1LJZ A;  4EY8 B;  4ZQY A;  1JBD A;  2L03 A;  2X8B B;  1CRE A;  2H62 C;  4XJJ A;  1NXB A;  1HC9 B;  1RL5 A;  2FD6 U;  2MJ0 A;  1IDL A;  1KS6 A;  2H8U A;  1ERA A;  1KL8 A;  1JE9 A;  2NBT A;  1KBA A;  1KTZ B;  2N99 A;  1IK8 A;  1QKD A;  5EBX A;  1ERG A;  1V6P A;  3BT1 U;  1CXO A;  2MUO A;  1CDT A;  1FSS B;  1G6M A;  1CTX A;  1CDR A;  1QM7 A;  2GOO C;  1NTN A;  5DO6 A;  4BDT B;  2MFA A;  1KU6 B;  2UWR A;  1FAS A;  1LSI A;  1PLO A;  2JVE A;  2GOO B;  1CCQ A;  3NH7 A;  4DO8 A;  1KBS A;  5IMY C;  3LAQ U;  4HQP F;  1KBT A;  1FFJ A;  2CDX A;  4P7U A;  1NEA A;  3VTS A;  1IJC A;  2K3G A;  3PLC A;  1LXH A;  3BT2 U;  1IDH A;  5IMT D;  4LFT A;  3U74 U;  2PJY C;  2OFS A;  1TGX A;  6EBX A;  1NOR A;  1CVO A;  2I9B E;  1KC4 A;  2PJY B;  2L5S A;  1CRF A;  1M9Z A;  2UX2 A;  2CRT A;  2MJ4 A;  4FAO C;  2CTX A;  1BXP A;  1B41 B;  3NDS A;  1FSC A;  1HAA A;  1LX5 B;  2CCX A;  1S4Y A;  1COE A;  1HAJ A;  1BTE A;  2H7Z A;  1REW C;  1TXA A;  2HLQ A;  1RGJ A;  1MAH F;  2QJA C;  2ERA A;  2BHI A;  1JGK A;  3EVS C;  2H7Z B;  1CB9 A;  1ONJ A;  1NYS A;  4OM4 A;  5DZ5 A;  1ES7 B;  1CXN A;  3NEQ A;  2H64 B;  4UY2 C;  2JQP A;  1LXG A;  1DRS A;  1TFS A;  4IYE A;  3EBX A;  1UG4 A;  2ABX A;  3KFD I;  4OM5 A;  1FF4 A;  1H0J A;  3HH7 A;  5DU1 A;  2LA1 A;  1W6B A;  1ABT A;  1QKE A;  3QB4 B;  1CDS A;  2J8B A;  2MHY A;  2BTX A;  1FRA A;  1TXB A;  2H62 D;  1YWH A;  4QTI U;  2MUP A;  1IDG A;  2H5F A;  2VLW A;  2LCR A;  1I02 A;  4AEA A;  1F8U B;  4RUD A;  2H64 C;  2MJY A;  2QJ9 C;  4KSN A; 
#chains in the Genus database with same CATH homology
 3KFD E;  1L4W A;  1IKC A;  1VB0 A;  2CRS A;  1COD A;  1NTX A;  4FAO E;  3FEV A;  3ERA A;  1KXI A;  2HLR A;  3U73 U;  1KFH A;  1HOY A;  1XT3 A;  1F94 A;  1MR6 A;  2QC1 A;  1CHV S;  4BIK B;  1CDQ A;  1IQ9 A;  1ZAD A;  1NYU A;  2QJB C;  1HC9 A;  1IDI A;  1LJZ A;  4EY8 B;  4ZQY A;  1JBD A;  2L03 A;  2X8B B;  1CRE A;  2H62 C;  4XJJ A;  1NXB A;  1HC9 B;  1RL5 A;  2FD6 U;  2MJ0 A;  1IDL A;  1KS6 A;  2H8U A;  1ERA A;  1KL8 A;  1JE9 A;  2NBT A;  1KBA A;  1KTZ B;  2N99 A;  1IK8 A;  1QKD A;  5EBX A;  1ERG A;  1V6P A;  3BT1 U;  1CXO A;  2MUO A;  1CDT A;  1FSS B;  1G6M A;  1CTX A;  1CDR A;  1QM7 A;  2GOO C;  1NTN A;  5DO6 A;  4BDT B;  2MFA A;  1KU6 B;  2UWR A;  1FAS A;  1LSI A;  1PLO A;  2JVE A;  2GOO B;  1CCQ A;  3NH7 A;  4DO8 A;  1KBS A;  5IMY C;  3LAQ U;  4HQP F;  1KBT A;  1FFJ A;  2CDX A;  4P7U A;  1NEA A;  3VTS A;  1IJC A;  2K3G A;  3PLC A;  1LXH A;  3BT2 U;  1IDH A;  5IMT D;  4LFT A;  3U74 U;  2PJY C;  2OFS A;  1TGX A;  6EBX A;  1NOR A;  1CVO A;  2I9B E;  1KC4 A;  2PJY B;  2L5S A;  1CRF A;  1M9Z A;  2UX2 A;  2CRT A;  2MJ4 A;  4FAO C;  2CTX A;  1BXP A;  1B41 B;  3NDS A;  1FSC A;  1HAA A;  1LX5 B;  2CCX A;  1S4Y A;  1COE A;  1HAJ A;  1BTE A;  2H7Z A;  1REW C;  1TXA A;  2HLQ A;  1RGJ A;  1MAH F;  2QJA C;  2ERA A;  2BHI A;  1JGK A;  3EVS C;  2H7Z B;  1CB9 A;  1ONJ A;  1NYS A;  4OM4 A;  5DZ5 A;  1ES7 B;  1CXN A;  3NEQ A;  2H64 B;  4UY2 C;  2JQP A;  1LXG A;  1DRS A;  1TFS A;  4IYE A;  3EBX A;  1UG4 A;  2ABX A;  3KFD I;  4OM5 A;  1FF4 A;  1H0J A;  3HH7 A;  5DU1 A;  2LA1 A;  1W6B A;  1ABT A;  1QKE A;  3QB4 B;  1CDS A;  2J8B A;  2MHY A;  2BTX A;  1FRA A;  1TXB A;  2H62 D;  1YWH A;  4QTI U;  2MUP A;  1IDG A;  2H5F A;  2VLW A;  2LCR A;  1I02 A;  4AEA A;  1F8U B;  4RUD A;  2H64 C;  2MJY A;  2QJ9 C;  4KSN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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