2N99A

Solution structure of the slurp-2, a secreted isoform of lynx1
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
76
structure length
76
Chain Sequence
MIWCHQCTGFGGCSHGSRCLRDSTHCVTTATRVLSNTEDLPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Neuropeptide
molecule keywords Ly-6/neurotoxin-like protein 1
publication title Secreted Isoform of Human Lynx1 (SLURP-2): Spatial Structure and Pharmacology of Interactions with Different Types of Acetylcholine Receptors.
pubmed doi rcsb
source organism Homo sapiens
total genus 9
structure length 76
sequence length 76
ec nomenclature
pdb deposition date 2015-11-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00021 UPAR_LY6 u-PAR/Ly-6 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2n99A00
1HAAA 1LSIA 2UX2A 1HC9B 1IDIA 1CDTA 1RL5A 3QB4B 5DU1A 1M9ZA 2N99A 1QM7A 3KFDI 6EBXA 1G6MA 1NTXA 2H62C 2JVEA 1FSCA 1TXAA 3EVSC 1KBTA 2MUOA 1CCQA 2MJ0A 1LXGA 1NEAA 5IMYC 4UY2C 3BT1U 4ZQYA 2VLWA 1TFSA 3BT2U 2HLQA 5IMTD 2BTXA 1IKCA 1CB9A 2ERAA 1KXIA 2UWRA 2ABXA 1LX5B 2LCRA 4HQPF 1W6BA 2HLRA 1CDRA 1CODA 2CRSA 2MFAA 1DRSA 1CXNA 2OFSA 1ES7B 2LA1A 1JGKA 1I02A 4RUDA 1IDLA 1NYSA 2K3GA 4OM5A 1COEA 1TXBA 1XT3A 3KFDE 1CVOA 1JE9A 2QJAC 5DZ5A 4BIKB 1IDHA 1ERGA 2JQPA 1CHVS 1KU6B 3VTSA 1B41B 3HH7A 1ONJA 1VB0A 1H0JA 1NORA 4BDTB 1UG4A 2BHIA 2CTXA 2QJBC 1MAHF 1F8UB 1CDSA 1KTZB 3PLCA 1NXBA 2H7ZA 1IQ9A 2PJYB 2GOOB 1HC9A 1MR6A 1PLOA 1KFHA 3NH7A 1KS6A 2CRTA 2CDXA 2GOOC 5EBXA 2L03A 1NYUA 1KC4A 1L4WA 2X8BB 1REWC 1V6PA 4FAOE 2H8UA 1RGJA 1S4YA 2H64B 3NEQA 1IDGA 3U74U 5DO6A 2QC1A 1CREA 2H64C 2MHYA 4FAOC 1QKEA 2H7ZB 1IJCA 1CXOA 1ABTA 1ZADA 3NDSA 1HAJA 2CCXA 1FASA 1IK8A 3EBXA 1BTEA 3LAQU 4DO8A 1LJZA 1TGXA 2MUPA 1KBSA 4P7UA 2J8BA 1JBDA 2FD6U 2I9BE 1KBAA 1NTNA 2PJYC 4AEAA 1FSSB 1KL8A 2L5SA 2NBTA 4EY8B 1CRFA 1FRAA 1CTXA 4XJJA 1BXPA 3FEVA 4IYEA 3ERAA 3U73U 2MJ4A 2MJYA 2H62D 1YWHA 4QTIU 1FF4A 1LXHA 1QKDA 4LFTA 4OM4A 1FFJA 1F94A 2QJ9C 2H5FA 1CDQA 1HOYA 1ERAA
chains in the Genus database with same CATH superfamily
1HAAA 1LSIA 2UX2A 1HC9B 1IDIA 1CDTA 1RL5A 3QB4B 5DU1A 1M9ZA 2N99A 1QM7A 3KFDI 6EBXA 1G6MA 1NTXA 2H62C 2JVEA 1FSCA 4KSNA 1TXAA 3EVSC 1KBTA 2MUOA 1CCQA 2MJ0A 1LXGA 1NEAA 5IMYC 4UY2C 3BT1U 4ZQYA 2VLWA 1TFSA 3BT2U 2HLQA 5IMTD 2BTXA 1IKCA 1CB9A 2ERAA 1KXIA 2UWRA 2ABXA 1LX5B 2LCRA 4HQPF 1W6BA 2HLRA 1CDRA 1CODA 2CRSA 2MFAA 1DRSA 1CXNA 2OFSA 1ES7B 2LA1A 1JGKA 1I02A 4RUDA 1IDLA 1NYSA 2K3GA 4OM5A 1COEA 1TXBA 1XT3A 3KFDE 1CVOA 1JE9A 2QJAC 5DZ5A 4BIKB 1IDHA 1ERGA 2JQPA 1CHVS 1KU6B 3VTSA 1B41B 3HH7A 1ONJA 1VB0A 1H0JA 1NORA 4BDTB 1UG4A 2BHIA 2CTXA 2QJBC 1MAHF 1F8UB 1CDSA 1KTZB 3PLCA 1NXBA 2H7ZA 1IQ9A 2PJYB 2GOOB 1HC9A 1MR6A 1PLOA 1KFHA 3NH7A 1KS6A 2CRTA 2CDXA 2GOOC 5EBXA 2L03A 1NYUA 1KC4A 1L4WA 2X8BB 1REWC 1V6PA 4FAOE 2H8UA 1RGJA 1S4YA 2H64B 3NEQA 1IDGA 3U74U 5DO6A 2QC1A 1CREA 2H64C 2MHYA 4FAOC 1QKEA 2H7ZB 1IJCA 1CXOA 1ABTA 1ZADA 3NDSA 1HAJA 2CCXA 1FASA 1IK8A 3EBXA 1BTEA 3LAQU 4DO8A 1LJZA 1TGXA 2MUPA 1KBSA 4P7UA 2J8BA 1JBDA 2FD6U 2I9BE 1KBAA 1NTNA 2PJYC 4AEAA 1FSSB 1KL8A 2L5SA 2NBTA 4EY8B 1CRFA 1FRAA 1CTXA 4XJJA 1BXPA 3FEVA 4IYEA 3ERAA 3U73U 2MJ4A 2MJYA 2H62D 1YWHA 4QTIU 1FF4A 1LXHA 1QKDA 4LFTA 4OM4A 1FFJA 1F94A 2QJ9C 2H5FA 1CDQA 1HOYA 1ERAA
chains in the Genus database with same CATH topology
1HAAA 1LSIA 2UX2A 1HC9B 1IDIA 1CDTA 1RL5A 3QB4B 5DU1A 1M9ZA 2N99A 1QM7A 3KFDI 6EBXA 1G6MA 1NTXA 2H62C 2JVEA 1FSCA 4KSNA 1TXAA 3EVSC 1KBTA 2MUOA 1CCQA 2MJ0A 1LXGA 1NEAA 5IMYC 4UY2C 3BT1U 4ZQYA 2VLWA 1TFSA 3BT2U 2HLQA 5IMTD 2BTXA 1IKCA 1CB9A 2ERAA 1KXIA 2UWRA 2ABXA 1LX5B 2LCRA 4HQPF 1W6BA 2HLRA 1CDRA 1CODA 2CRSA 2MFAA 1DRSA 1CXNA 2OFSA 1ES7B 2LA1A 1JGKA 1I02A 4RUDA 1IDLA 1NYSA 2K3GA 4OM5A 1COEA 1TXBA 1XT3A 3KFDE 1CVOA 1JE9A 2QJAC 5DZ5A 4BIKB 1IDHA 1ERGA 2JQPA 1CHVS 1KU6B 3VTSA 1B41B 3HH7A 1ONJA 1VB0A 1H0JA 1NORA 4BDTB 1UG4A 2BHIA 2CTXA 2QJBC 1MAHF 1F8UB 1CDSA 1KTZB 3PLCA 1NXBA 2H7ZA 1IQ9A 2PJYB 2GOOB 1HC9A 1MR6A 1PLOA 1KFHA 3NH7A 1KS6A 2CRTA 2CDXA 2GOOC 5EBXA 2L03A 1NYUA 1KC4A 1L4WA 2X8BB 1REWC 1V6PA 4FAOE 2H8UA 1RGJA 1S4YA 2H64B 3NEQA 1IDGA 3U74U 5DO6A 2QC1A 1CREA 2H64C 2MHYA 4FAOC 1QKEA 2H7ZB 1IJCA 1CXOA 1ABTA 1ZADA 3NDSA 1HAJA 2CCXA 1FASA 1IK8A 3EBXA 1BTEA 3LAQU 4DO8A 1LJZA 1TGXA 2MUPA 1KBSA 4P7UA 2J8BA 1JBDA 2FD6U 2I9BE 1KBAA 1NTNA 2PJYC 4AEAA 1FSSB 1KL8A 2L5SA 2NBTA 4EY8B 1CRFA 1FRAA 1CTXA 4XJJA 1BXPA 3FEVA 4IYEA 3ERAA 3U73U 2MJ4A 2MJYA 2H62D 1YWHA 4QTIU 1FF4A 1LXHA 1QKDA 4LFTA 4OM4A 1FFJA 1F94A 2QJ9C 2H5FA 1CDQA 1HOYA 1ERAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HAA A;  1LSI A;  2UX2 A;  1HC9 B;  1IDI A;  1CDT A;  1RL5 A;  3QB4 B;  5DU1 A;  1M9Z A;  2N99 A;  1QM7 A;  3KFD I;  6EBX A;  1G6M A;  1NTX A;  2H62 C;  2JVE A;  1FSC A;  1TXA A;  3EVS C;  1KBT A;  2MUO A;  1CCQ A;  2MJ0 A;  1LXG A;  1NEA A;  5IMY C;  4UY2 C;  3BT1 U;  4ZQY A;  2VLW A;  1TFS A;  3BT2 U;  2HLQ A;  5IMT D;  2BTX A;  1IKC A;  1CB9 A;  2ERA A;  1KXI A;  2UWR A;  2ABX A;  1LX5 B;  2LCR A;  4HQP F;  1W6B A;  2HLR A;  1CDR A;  1COD A;  2CRS A;  2MFA A;  1DRS A;  1CXN A;  2OFS A;  1ES7 B;  2LA1 A;  1JGK A;  1I02 A;  4RUD A;  1IDL A;  1NYS A;  2K3G A;  4OM5 A;  1COE A;  1TXB A;  1XT3 A;  3KFD E;  1CVO A;  1JE9 A;  2QJA C;  5DZ5 A;  4BIK B;  1IDH A;  1ERG A;  2JQP A;  1CHV S;  1KU6 B;  3VTS A;  1B41 B;  3HH7 A;  1ONJ A;  1VB0 A;  1H0J A;  1NOR A;  4BDT B;  1UG4 A;  2BHI A;  2CTX A;  2QJB C;  1MAH F;  1F8U B;  1CDS A;  1KTZ B;  3PLC A;  1NXB A;  2H7Z A;  1IQ9 A;  2PJY B;  2GOO B;  1HC9 A;  1MR6 A;  1PLO A;  1KFH A;  3NH7 A;  1KS6 A;  2CRT A;  2CDX A;  2GOO C;  5EBX A;  2L03 A;  1NYU A;  1KC4 A;  1L4W A;  2X8B B;  1REW C;  1V6P A;  4FAO E;  2H8U A;  1RGJ A;  1S4Y A;  2H64 B;  3NEQ A;  1IDG A;  3U74 U;  5DO6 A;  2QC1 A;  1CRE A;  2H64 C;  2MHY A;  4FAO C;  1QKE A;  2H7Z B;  1IJC A;  1CXO A;  1ABT A;  1ZAD A;  3NDS A;  1HAJ A;  2CCX A;  1FAS A;  1IK8 A;  3EBX A;  1BTE A;  3LAQ U;  4DO8 A;  1LJZ A;  1TGX A;  2MUP A;  1KBS A;  4P7U A;  2J8B A;  1JBD A;  2FD6 U;  2I9B E;  1KBA A;  1NTN A;  2PJY C;  4AEA A;  1FSS B;  1KL8 A;  2L5S A;  2NBT A;  4EY8 B;  1CRF A;  1FRA A;  1CTX A;  4XJJ A;  1BXP A;  3FEV A;  4IYE A;  3ERA A;  3U73 U;  2MJ4 A;  2MJY A;  2H62 D;  1YWH A;  4QTI U;  1FF4 A;  1LXH A;  1QKD A;  4LFT A;  4OM4 A;  1FFJ A;  1F94 A;  2QJ9 C;  2H5F A;  1CDQ A;  1HOY A;  1ERA A; 
#chains in the Genus database with same CATH topology
 1HAA A;  1LSI A;  2UX2 A;  1HC9 B;  1IDI A;  1CDT A;  1RL5 A;  3QB4 B;  5DU1 A;  1M9Z A;  2N99 A;  1QM7 A;  3KFD I;  6EBX A;  1G6M A;  1NTX A;  2H62 C;  2JVE A;  1FSC A;  4KSN A;  1TXA A;  3EVS C;  1KBT A;  2MUO A;  1CCQ A;  2MJ0 A;  1LXG A;  1NEA A;  5IMY C;  4UY2 C;  3BT1 U;  4ZQY A;  2VLW A;  1TFS A;  3BT2 U;  2HLQ A;  5IMT D;  2BTX A;  1IKC A;  1CB9 A;  2ERA A;  1KXI A;  2UWR A;  2ABX A;  1LX5 B;  2LCR A;  4HQP F;  1W6B A;  2HLR A;  1CDR A;  1COD A;  2CRS A;  2MFA A;  1DRS A;  1CXN A;  2OFS A;  1ES7 B;  2LA1 A;  1JGK A;  1I02 A;  4RUD A;  1IDL A;  1NYS A;  2K3G A;  4OM5 A;  1COE A;  1TXB A;  1XT3 A;  3KFD E;  1CVO A;  1JE9 A;  2QJA C;  5DZ5 A;  4BIK B;  1IDH A;  1ERG A;  2JQP A;  1CHV S;  1KU6 B;  3VTS A;  1B41 B;  3HH7 A;  1ONJ A;  1VB0 A;  1H0J A;  1NOR A;  4BDT B;  1UG4 A;  2BHI A;  2CTX A;  2QJB C;  1MAH F;  1F8U B;  1CDS A;  1KTZ B;  3PLC A;  1NXB A;  2H7Z A;  1IQ9 A;  2PJY B;  2GOO B;  1HC9 A;  1MR6 A;  1PLO A;  1KFH A;  3NH7 A;  1KS6 A;  2CRT A;  2CDX A;  2GOO C;  5EBX A;  2L03 A;  1NYU A;  1KC4 A;  1L4W A;  2X8B B;  1REW C;  1V6P A;  4FAO E;  2H8U A;  1RGJ A;  1S4Y A;  2H64 B;  3NEQ A;  1IDG A;  3U74 U;  5DO6 A;  2QC1 A;  1CRE A;  2H64 C;  2MHY A;  4FAO C;  1QKE A;  2H7Z B;  1IJC A;  1CXO A;  1ABT A;  1ZAD A;  3NDS A;  1HAJ A;  2CCX A;  1FAS A;  1IK8 A;  3EBX A;  1BTE A;  3LAQ U;  4DO8 A;  1LJZ A;  1TGX A;  2MUP A;  1KBS A;  4P7U A;  2J8B A;  1JBD A;  2FD6 U;  2I9B E;  1KBA A;  1NTN A;  2PJY C;  4AEA A;  1FSS B;  1KL8 A;  2L5S A;  2NBT A;  4EY8 B;  1CRF A;  1FRA A;  1CTX A;  4XJJ A;  1BXP A;  3FEV A;  4IYE A;  3ERA A;  3U73 U;  2MJ4 A;  2MJY A;  2H62 D;  1YWH A;  4QTI U;  1FF4 A;  1LXH A;  1QKD A;  4LFT A;  4OM4 A;  1FFJ A;  1F94 A;  2QJ9 C;  2H5F A;  1CDQ A;  1HOY A;  1ERA A; 
#chains in the Genus database with same CATH homology
 1HAA A;  1LSI A;  2UX2 A;  1HC9 B;  1IDI A;  1CDT A;  1RL5 A;  3QB4 B;  5DU1 A;  1M9Z A;  2N99 A;  1QM7 A;  3KFD I;  6EBX A;  1G6M A;  1NTX A;  2H62 C;  2JVE A;  1FSC A;  4KSN A;  1TXA A;  3EVS C;  1KBT A;  2MUO A;  1CCQ A;  2MJ0 A;  1LXG A;  1NEA A;  5IMY C;  4UY2 C;  3BT1 U;  4ZQY A;  2VLW A;  1TFS A;  3BT2 U;  2HLQ A;  5IMT D;  2BTX A;  1IKC A;  1CB9 A;  2ERA A;  1KXI A;  2UWR A;  2ABX A;  1LX5 B;  2LCR A;  4HQP F;  1W6B A;  2HLR A;  1CDR A;  1COD A;  2CRS A;  2MFA A;  1DRS A;  1CXN A;  2OFS A;  1ES7 B;  2LA1 A;  1JGK A;  1I02 A;  4RUD A;  1IDL A;  1NYS A;  2K3G A;  4OM5 A;  1COE A;  1TXB A;  1XT3 A;  3KFD E;  1CVO A;  1JE9 A;  2QJA C;  5DZ5 A;  4BIK B;  1IDH A;  1ERG A;  2JQP A;  1CHV S;  1KU6 B;  3VTS A;  1B41 B;  3HH7 A;  1ONJ A;  1VB0 A;  1H0J A;  1NOR A;  4BDT B;  1UG4 A;  2BHI A;  2CTX A;  2QJB C;  1MAH F;  1F8U B;  1CDS A;  1KTZ B;  3PLC A;  1NXB A;  2H7Z A;  1IQ9 A;  2PJY B;  2GOO B;  1HC9 A;  1MR6 A;  1PLO A;  1KFH A;  3NH7 A;  1KS6 A;  2CRT A;  2CDX A;  2GOO C;  5EBX A;  2L03 A;  1NYU A;  1KC4 A;  1L4W A;  2X8B B;  1REW C;  1V6P A;  4FAO E;  2H8U A;  1RGJ A;  1S4Y A;  2H64 B;  3NEQ A;  1IDG A;  3U74 U;  5DO6 A;  2QC1 A;  1CRE A;  2H64 C;  2MHY A;  4FAO C;  1QKE A;  2H7Z B;  1IJC A;  1CXO A;  1ABT A;  1ZAD A;  3NDS A;  1HAJ A;  2CCX A;  1FAS A;  1IK8 A;  3EBX A;  1BTE A;  3LAQ U;  4DO8 A;  1LJZ A;  1TGX A;  2MUP A;  1KBS A;  4P7U A;  2J8B A;  1JBD A;  2FD6 U;  2I9B E;  1KBA A;  1NTN A;  2PJY C;  4AEA A;  1FSS B;  1KL8 A;  2L5S A;  2NBT A;  4EY8 B;  1CRF A;  1FRA A;  1CTX A;  4XJJ A;  1BXP A;  3FEV A;  4IYE A;  3ERA A;  3U73 U;  2MJ4 A;  2MJY A;  2H62 D;  1YWH A;  4QTI U;  1FF4 A;  1LXH A;  1QKD A;  4LFT A;  4OM4 A;  1FFJ A;  1F94 A;  2QJ9 C;  2H5F A;  1CDQ A;  1HOY A;  1ERA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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