3NH7A

Crystal structure of the neutralizing fab fragment abd1556 bound to the bmp type i receptor ia
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
85
structure length
85
Chain Sequence
PFLKCYCSGHCPDDAINNTCITNGHCFAIIEEDDQGETTLASGCMKYEGSDFQCKDSPKAQLRRTIECCRTNLCNQYLQPTLPPV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords Antibody fragment Fab AbD1556, heavy chain
publication title A selection fit mechanism in BMP receptor IA as a possible source for BMP ligand-receptor promiscuity
pubmed doi rcsb
source organism Homo sapiens
total genus 11
structure length 85
sequence length 85
chains with identical sequence B, C, D
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2010-06-14

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01064 Activin_recp Activin types I and II receptor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 3nh7A00
4OM4A 1IDHA 2H7ZB 1YWHA 3U74U 6EBXA 1IJCA 1CDRA 2H7ZA 1ONJA 1LXGA 2H64C 1IKCA 2OFSA 1M9ZA 3U73U 1RL5A 3KFDE 4AEAA 1CB9A 1NXBA 4DO8A 2HLRA 3NDSA 1F8UB 1ABTA 2UX2A 1CTXA 4P7UA 2QJBC 2CRTA 4RUDA 1JBDA 1MAHF 1ES7B 4FAOC 1FRAA 1IQ9A 1HC9B 2QJAC 1HOYA 1KS6A 3NH7A 1JE9A 1V6PA 2I9BE 2JVEA 1CODA 3ERAA 1KBAA 1CREA 1NORA 2X8BB 1IDGA 1NTNA 1HAAA 1QKDA 2L5SA 1NYSA 1TGXA 2QC1A 1JGKA 4ZQYA 2HLQA 1ZADA 4QTIU 1KL8A 4BIKB 1LXHA 2MHYA 1FF4A 1HAJA 1FSSB 4FAOE 1PLOA 1IDIA 2MUPA 3PLCA 3HH7A 5IMTD 4EY8B 1G6MA 1KBSA 2MJYA 4HQPF 1HC9A 1IK8A 1NYUA 3LAQU 1MR6A 1KFHA 1H0JA 2NBTA 2BHIA 2CDXA 2N99A 1LX5B 1CXOA 1W6BA 1KXIA 1CDSA 2CRSA 2QJ9C 5EBXA 2GOOB 1CCQA 5DU1A 1I02A 2ERAA 2H62C 2CTXA 1FASA 1XT3A 2LCRA 1NTXA 2MJ0A 1BXPA 4LFTA 2UWRA 3QB4B 5IMYC 2FD6U 1QKEA 2CCXA 2MJ4A 1FFJA 1LJZA 2H5FA 1L4WA 1B41B 5DO6A 4OM5A 1LSIA 4BDTB 3EVSC 2H62D 2LA1A 1REWC 1KTZB 2ABXA 1CRFA 2J8BA 1S4YA 1BTEA 1RGJA 2PJYB 2GOOC 3NEQA 2K3GA 4XJJA 1KU6B 1IDLA 1F94A 3EBXA 1CDTA 2H64B 1KBTA 1TXBA 2JQPA 3VTSA 2MUOA 1TFSA 4UY2C 1CXNA 1DRSA 2H8UA 3KFDI 1COEA 1FSCA 1TXAA 2L03A 1CHVS 2BTXA 1CVOA 1QM7A 2MFAA 3FEVA 1KC4A 1UG4A 1NEAA 1ERGA 1VB0A 4IYEA 2PJYC 1ERAA 1CDQA 2VLWA 3BT1U 5DZ5A 3BT2U
chains in the Genus database with same CATH superfamily
4OM4A 1IDHA 2H7ZB 1YWHA 3U74U 6EBXA 1IJCA 1CDRA 2H7ZA 1ONJA 1LXGA 2H64C 1IKCA 2OFSA 1M9ZA 3U73U 1RL5A 3KFDE 4AEAA 1CB9A 1NXBA 4DO8A 2HLRA 3NDSA 1F8UB 1ABTA 2UX2A 1CTXA 4P7UA 2QJBC 2CRTA 4RUDA 1JBDA 1MAHF 1ES7B 4FAOC 1FRAA 1IQ9A 1HC9B 2QJAC 1HOYA 1KS6A 3NH7A 1JE9A 1V6PA 2I9BE 2JVEA 1CODA 3ERAA 1KBAA 1CREA 1NORA 2X8BB 1IDGA 1NTNA 1HAAA 1QKDA 2L5SA 1NYSA 1TGXA 4KSNA 2QC1A 1JGKA 4ZQYA 2HLQA 1ZADA 4QTIU 1KL8A 4BIKB 1LXHA 2MHYA 1FF4A 1HAJA 1FSSB 4FAOE 1PLOA 1IDIA 2MUPA 3PLCA 3HH7A 5IMTD 4EY8B 1G6MA 1KBSA 2MJYA 4HQPF 1HC9A 1IK8A 1NYUA 3LAQU 1MR6A 1KFHA 1H0JA 2NBTA 2BHIA 2CDXA 2N99A 1LX5B 1CXOA 1W6BA 1KXIA 1CDSA 2CRSA 2QJ9C 5EBXA 2GOOB 1CCQA 5DU1A 1I02A 2ERAA 2H62C 2CTXA 1FASA 1XT3A 2LCRA 1NTXA 2MJ0A 1BXPA 4LFTA 2UWRA 3QB4B 5IMYC 2FD6U 1QKEA 2CCXA 2MJ4A 1FFJA 1LJZA 2H5FA 1L4WA 1B41B 5DO6A 4OM5A 1LSIA 4BDTB 3EVSC 2H62D 2LA1A 1REWC 1KTZB 2ABXA 1CRFA 2J8BA 1S4YA 1BTEA 1RGJA 2PJYB 2GOOC 3NEQA 2K3GA 4XJJA 1KU6B 1IDLA 1F94A 3EBXA 1CDTA 2H64B 1KBTA 1TXBA 2JQPA 3VTSA 2MUOA 1TFSA 4UY2C 1CXNA 1DRSA 2H8UA 3KFDI 1COEA 1FSCA 1TXAA 2L03A 1CHVS 2BTXA 1CVOA 1QM7A 2MFAA 3FEVA 1KC4A 1UG4A 1NEAA 1ERGA 1VB0A 4IYEA 2PJYC 1ERAA 1CDQA 2VLWA 3BT1U 5DZ5A 3BT2U
chains in the Genus database with same CATH topology
4OM4A 1IDHA 2H7ZB 1YWHA 3U74U 6EBXA 1IJCA 1CDRA 2H7ZA 1ONJA 1LXGA 2H64C 1IKCA 2OFSA 1M9ZA 3U73U 1RL5A 3KFDE 4AEAA 1CB9A 1NXBA 4DO8A 2HLRA 3NDSA 1F8UB 1ABTA 2UX2A 1CTXA 4P7UA 2QJBC 2CRTA 4RUDA 1JBDA 1MAHF 1ES7B 4FAOC 1FRAA 1IQ9A 1HC9B 2QJAC 1HOYA 1KS6A 3NH7A 1JE9A 1V6PA 2I9BE 2JVEA 1CODA 3ERAA 1KBAA 1CREA 1NORA 2X8BB 1IDGA 1NTNA 1HAAA 1QKDA 2L5SA 1NYSA 1TGXA 4KSNA 2QC1A 1JGKA 4ZQYA 2HLQA 1ZADA 4QTIU 1KL8A 4BIKB 1LXHA 2MHYA 1FF4A 1HAJA 1FSSB 4FAOE 1PLOA 1IDIA 2MUPA 3PLCA 3HH7A 5IMTD 4EY8B 1G6MA 1KBSA 2MJYA 4HQPF 1HC9A 1IK8A 1NYUA 3LAQU 1MR6A 1KFHA 1H0JA 2NBTA 2BHIA 2CDXA 2N99A 1LX5B 1CXOA 1W6BA 1KXIA 1CDSA 2CRSA 2QJ9C 5EBXA 2GOOB 1CCQA 5DU1A 1I02A 2ERAA 2H62C 2CTXA 1FASA 1XT3A 2LCRA 1NTXA 2MJ0A 1BXPA 4LFTA 2UWRA 3QB4B 5IMYC 2FD6U 1QKEA 2CCXA 2MJ4A 1FFJA 1LJZA 2H5FA 1L4WA 1B41B 5DO6A 4OM5A 1LSIA 4BDTB 3EVSC 2H62D 2LA1A 1REWC 1KTZB 2ABXA 1CRFA 2J8BA 1S4YA 1BTEA 1RGJA 2PJYB 2GOOC 3NEQA 2K3GA 4XJJA 1KU6B 1IDLA 1F94A 3EBXA 1CDTA 2H64B 1KBTA 1TXBA 2JQPA 3VTSA 2MUOA 1TFSA 4UY2C 1CXNA 1DRSA 2H8UA 3KFDI 1COEA 1FSCA 1TXAA 2L03A 1CHVS 2BTXA 1CVOA 1QM7A 2MFAA 3FEVA 1KC4A 1UG4A 1NEAA 1ERGA 1VB0A 4IYEA 2PJYC 1ERAA 1CDQA 2VLWA 3BT1U 5DZ5A 3BT2U
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OM4 A;  1IDH A;  2H7Z B;  1YWH A;  3U74 U;  6EBX A;  1IJC A;  1CDR A;  2H7Z A;  1ONJ A;  1LXG A;  2H64 C;  1IKC A;  2OFS A;  1M9Z A;  3U73 U;  1RL5 A;  3KFD E;  4AEA A;  1CB9 A;  1NXB A;  4DO8 A;  2HLR A;  3NDS A;  1F8U B;  1ABT A;  2UX2 A;  1CTX A;  4P7U A;  2QJB C;  2CRT A;  4RUD A;  1JBD A;  1MAH F;  1ES7 B;  4FAO C;  1FRA A;  1IQ9 A;  1HC9 B;  2QJA C;  1HOY A;  1KS6 A;  3NH7 A;  1JE9 A;  1V6P A;  2I9B E;  2JVE A;  1COD A;  3ERA A;  1KBA A;  1CRE A;  1NOR A;  2X8B B;  1IDG A;  1NTN A;  1HAA A;  1QKD A;  2L5S A;  1NYS A;  1TGX A;  2QC1 A;  1JGK A;  4ZQY A;  2HLQ A;  1ZAD A;  4QTI U;  1KL8 A;  4BIK B;  1LXH A;  2MHY A;  1FF4 A;  1HAJ A;  1FSS B;  4FAO E;  1PLO A;  1IDI A;  2MUP A;  3PLC A;  3HH7 A;  5IMT D;  4EY8 B;  1G6M A;  1KBS A;  2MJY A;  4HQP F;  1HC9 A;  1IK8 A;  1NYU A;  3LAQ U;  1MR6 A;  1KFH A;  1H0J A;  2NBT A;  2BHI A;  2CDX A;  2N99 A;  1LX5 B;  1CXO A;  1W6B A;  1KXI A;  1CDS A;  2CRS A;  2QJ9 C;  5EBX A;  2GOO B;  1CCQ A;  5DU1 A;  1I02 A;  2ERA A;  2H62 C;  2CTX A;  1FAS A;  1XT3 A;  2LCR A;  1NTX A;  2MJ0 A;  1BXP A;  4LFT A;  2UWR A;  3QB4 B;  5IMY C;  2FD6 U;  1QKE A;  2CCX A;  2MJ4 A;  1FFJ A;  1LJZ A;  2H5F A;  1L4W A;  1B41 B;  5DO6 A;  4OM5 A;  1LSI A;  4BDT B;  3EVS C;  2H62 D;  2LA1 A;  1REW C;  1KTZ B;  2ABX A;  1CRF A;  2J8B A;  1S4Y A;  1BTE A;  1RGJ A;  2PJY B;  2GOO C;  3NEQ A;  2K3G A;  4XJJ A;  1KU6 B;  1IDL A;  1F94 A;  3EBX A;  1CDT A;  2H64 B;  1KBT A;  1TXB A;  2JQP A;  3VTS A;  2MUO A;  1TFS A;  4UY2 C;  1CXN A;  1DRS A;  2H8U A;  3KFD I;  1COE A;  1FSC A;  1TXA A;  2L03 A;  1CHV S;  2BTX A;  1CVO A;  1QM7 A;  2MFA A;  3FEV A;  1KC4 A;  1UG4 A;  1NEA A;  1ERG A;  1VB0 A;  4IYE A;  2PJY C;  1ERA A;  1CDQ A;  2VLW A;  3BT1 U;  5DZ5 A;  3BT2 U; 
#chains in the Genus database with same CATH topology
 4OM4 A;  1IDH A;  2H7Z B;  1YWH A;  3U74 U;  6EBX A;  1IJC A;  1CDR A;  2H7Z A;  1ONJ A;  1LXG A;  2H64 C;  1IKC A;  2OFS A;  1M9Z A;  3U73 U;  1RL5 A;  3KFD E;  4AEA A;  1CB9 A;  1NXB A;  4DO8 A;  2HLR A;  3NDS A;  1F8U B;  1ABT A;  2UX2 A;  1CTX A;  4P7U A;  2QJB C;  2CRT A;  4RUD A;  1JBD A;  1MAH F;  1ES7 B;  4FAO C;  1FRA A;  1IQ9 A;  1HC9 B;  2QJA C;  1HOY A;  1KS6 A;  3NH7 A;  1JE9 A;  1V6P A;  2I9B E;  2JVE A;  1COD A;  3ERA A;  1KBA A;  1CRE A;  1NOR A;  2X8B B;  1IDG A;  1NTN A;  1HAA A;  1QKD A;  2L5S A;  1NYS A;  1TGX A;  4KSN A;  2QC1 A;  1JGK A;  4ZQY A;  2HLQ A;  1ZAD A;  4QTI U;  1KL8 A;  4BIK B;  1LXH A;  2MHY A;  1FF4 A;  1HAJ A;  1FSS B;  4FAO E;  1PLO A;  1IDI A;  2MUP A;  3PLC A;  3HH7 A;  5IMT D;  4EY8 B;  1G6M A;  1KBS A;  2MJY A;  4HQP F;  1HC9 A;  1IK8 A;  1NYU A;  3LAQ U;  1MR6 A;  1KFH A;  1H0J A;  2NBT A;  2BHI A;  2CDX A;  2N99 A;  1LX5 B;  1CXO A;  1W6B A;  1KXI A;  1CDS A;  2CRS A;  2QJ9 C;  5EBX A;  2GOO B;  1CCQ A;  5DU1 A;  1I02 A;  2ERA A;  2H62 C;  2CTX A;  1FAS A;  1XT3 A;  2LCR A;  1NTX A;  2MJ0 A;  1BXP A;  4LFT A;  2UWR A;  3QB4 B;  5IMY C;  2FD6 U;  1QKE A;  2CCX A;  2MJ4 A;  1FFJ A;  1LJZ A;  2H5F A;  1L4W A;  1B41 B;  5DO6 A;  4OM5 A;  1LSI A;  4BDT B;  3EVS C;  2H62 D;  2LA1 A;  1REW C;  1KTZ B;  2ABX A;  1CRF A;  2J8B A;  1S4Y A;  1BTE A;  1RGJ A;  2PJY B;  2GOO C;  3NEQ A;  2K3G A;  4XJJ A;  1KU6 B;  1IDL A;  1F94 A;  3EBX A;  1CDT A;  2H64 B;  1KBT A;  1TXB A;  2JQP A;  3VTS A;  2MUO A;  1TFS A;  4UY2 C;  1CXN A;  1DRS A;  2H8U A;  3KFD I;  1COE A;  1FSC A;  1TXA A;  2L03 A;  1CHV S;  2BTX A;  1CVO A;  1QM7 A;  2MFA A;  3FEV A;  1KC4 A;  1UG4 A;  1NEA A;  1ERG A;  1VB0 A;  4IYE A;  2PJY C;  1ERA A;  1CDQ A;  2VLW A;  3BT1 U;  5DZ5 A;  3BT2 U; 
#chains in the Genus database with same CATH homology
 4OM4 A;  1IDH A;  2H7Z B;  1YWH A;  3U74 U;  6EBX A;  1IJC A;  1CDR A;  2H7Z A;  1ONJ A;  1LXG A;  2H64 C;  1IKC A;  2OFS A;  1M9Z A;  3U73 U;  1RL5 A;  3KFD E;  4AEA A;  1CB9 A;  1NXB A;  4DO8 A;  2HLR A;  3NDS A;  1F8U B;  1ABT A;  2UX2 A;  1CTX A;  4P7U A;  2QJB C;  2CRT A;  4RUD A;  1JBD A;  1MAH F;  1ES7 B;  4FAO C;  1FRA A;  1IQ9 A;  1HC9 B;  2QJA C;  1HOY A;  1KS6 A;  3NH7 A;  1JE9 A;  1V6P A;  2I9B E;  2JVE A;  1COD A;  3ERA A;  1KBA A;  1CRE A;  1NOR A;  2X8B B;  1IDG A;  1NTN A;  1HAA A;  1QKD A;  2L5S A;  1NYS A;  1TGX A;  4KSN A;  2QC1 A;  1JGK A;  4ZQY A;  2HLQ A;  1ZAD A;  4QTI U;  1KL8 A;  4BIK B;  1LXH A;  2MHY A;  1FF4 A;  1HAJ A;  1FSS B;  4FAO E;  1PLO A;  1IDI A;  2MUP A;  3PLC A;  3HH7 A;  5IMT D;  4EY8 B;  1G6M A;  1KBS A;  2MJY A;  4HQP F;  1HC9 A;  1IK8 A;  1NYU A;  3LAQ U;  1MR6 A;  1KFH A;  1H0J A;  2NBT A;  2BHI A;  2CDX A;  2N99 A;  1LX5 B;  1CXO A;  1W6B A;  1KXI A;  1CDS A;  2CRS A;  2QJ9 C;  5EBX A;  2GOO B;  1CCQ A;  5DU1 A;  1I02 A;  2ERA A;  2H62 C;  2CTX A;  1FAS A;  1XT3 A;  2LCR A;  1NTX A;  2MJ0 A;  1BXP A;  4LFT A;  2UWR A;  3QB4 B;  5IMY C;  2FD6 U;  1QKE A;  2CCX A;  2MJ4 A;  1FFJ A;  1LJZ A;  2H5F A;  1L4W A;  1B41 B;  5DO6 A;  4OM5 A;  1LSI A;  4BDT B;  3EVS C;  2H62 D;  2LA1 A;  1REW C;  1KTZ B;  2ABX A;  1CRF A;  2J8B A;  1S4Y A;  1BTE A;  1RGJ A;  2PJY B;  2GOO C;  3NEQ A;  2K3G A;  4XJJ A;  1KU6 B;  1IDL A;  1F94 A;  3EBX A;  1CDT A;  2H64 B;  1KBT A;  1TXB A;  2JQP A;  3VTS A;  2MUO A;  1TFS A;  4UY2 C;  1CXN A;  1DRS A;  2H8U A;  3KFD I;  1COE A;  1FSC A;  1TXA A;  2L03 A;  1CHV S;  2BTX A;  1CVO A;  1QM7 A;  2MFA A;  3FEV A;  1KC4 A;  1UG4 A;  1NEA A;  1ERG A;  1VB0 A;  4IYE A;  2PJY C;  1ERA A;  1CDQ A;  2VLW A;  3BT1 U;  5DZ5 A;  3BT2 U; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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