1IDHA

The nmr solution structure of the complex formed between alpha-bungarotoxin and an 18mer cognate peptide
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
74
structure length
74
Chain Sequence
IVCHTTATSPISAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCCSTDKCNPHPKQRPG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords ALPHA-BUNGAROTOXIN
publication title The solution structure of the complex formed between alpha-bungarotoxin and an 18-mer cognate peptide derived from the alpha 1 subunit of the nicotinic acetylcholine receptor from Torpedo californica.
pubmed doi rcsb
source organism Torpedo californica
total genus 5
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2001-04-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1idhA00
1ES7B 1ZADA 1FSCA 3LAQU 2ABXA 1S4YA 2L03A 1IDLA 2LCRA 1RL5A 1IK8A 2CCXA 1RGJA 1IDIA 1HAJA 1CVOA 1NYUA 1CDQA 1FSSB 1LSIA 1HAAA 1TXAA 4LFTA 4FAOE 1QKEA 1ERGA 1W6BA 2GOOC 1I02A 1NYSA 2H8UA 2GOOB 1JGKA 1KXIA 2MJYA 1LX5B 1CCQA 1COEA 1CREA 4DO8A 1PLOA 3U73U 2VLWA 4HQPF 1YWHA 3NDSA 2NBTA 5IMYC 1CRFA 2L5SA 4FAOC 1HOYA 2QC1A 4QTIU 2QJ9C 2J8BA 1NXBA 1B41B 5DO6A 1KTZB 1LJZA 2N99A 1HC9A 2BHIA 2CTXA 1G6MA 1KC4A 1TXBA 2QJAC 3PLCA 1IDHA 1XT3A 2QJBC 4BIKB 1NORA 1TFSA 2UWRA 2I9BE 4RUDA 2CRSA 1CTXA 3NH7A 1IDGA 4EY8B 2K3GA 2JQPA 1NTNA 1ONJA 1MAHF 1IKCA 1KS6A 2OFSA 2H7ZB 3EBXA 2JVEA 1QKDA 1JE9A 1CHVS 1LXHA 1KL8A 2H62C 3KFDI 1CDRA 4XJJA 1F8UB 1BTEA 3U74U 4AEAA 2MUPA 4OM4A 3HH7A 1MR6A 2FD6U 1FFJA 2MJ4A 1M9ZA 1CDSA 4P7UA 5DU1A 1KFHA 1UG4A 1NTXA 1CB9A 1CDTA 1FF4A 1V6PA 2MUOA 3BT1U 1FRAA 1F94A 6EBXA 1IJCA 4IYEA 1TGXA 2H62D 5DZ5A 1KBSA 1REWC 2HLRA 2X8BB 3ERAA 1QM7A 1KBAA 3BT2U 4OM5A 3NEQA 1DRSA 3FEVA 2H5FA 2BTXA 2H64C 3VTSA 1NEAA 1ABTA 2LA1A 4ZQYA 2H64B 2CRTA 1L4WA 1FASA 5IMTD 2MFAA 3EVSC 1CXOA 1CODA 2ERAA 1KU6B 4BDTB 1CXNA 1H0JA 4UY2C 2PJYC 2MHYA 1VB0A 1HC9B 1KBTA 1ERAA 2CDXA 2PJYB 1LXGA 5EBXA 2MJ0A 2UX2A 1BXPA 2HLQA 1IQ9A 2H7ZA 1JBDA 3QB4B 3KFDE
chains in the Genus database with same CATH superfamily
1ES7B 1ZADA 1FSCA 3LAQU 2ABXA 1S4YA 2L03A 1IDLA 2LCRA 1RL5A 1IK8A 2CCXA 1RGJA 1IDIA 1HAJA 1CVOA 1NYUA 1CDQA 1FSSB 1LSIA 1HAAA 1TXAA 4LFTA 4FAOE 1QKEA 1ERGA 1W6BA 2GOOC 1I02A 1NYSA 2H8UA 2GOOB 1JGKA 1KXIA 2MJYA 1LX5B 1CCQA 1COEA 1CREA 4DO8A 1PLOA 4KSNA 3U73U 2VLWA 4HQPF 1YWHA 3NDSA 2NBTA 5IMYC 1CRFA 2L5SA 4FAOC 1HOYA 2QC1A 4QTIU 2QJ9C 2J8BA 1NXBA 1B41B 5DO6A 1KTZB 1LJZA 2N99A 1HC9A 2BHIA 2CTXA 1G6MA 1KC4A 1TXBA 2QJAC 3PLCA 1IDHA 1XT3A 2QJBC 4BIKB 1NORA 1TFSA 2UWRA 2I9BE 4RUDA 2CRSA 1CTXA 3NH7A 1IDGA 4EY8B 2K3GA 2JQPA 1NTNA 1ONJA 1MAHF 1IKCA 1KS6A 2OFSA 2H7ZB 3EBXA 2JVEA 1QKDA 1JE9A 1CHVS 1LXHA 1KL8A 2H62C 3KFDI 1CDRA 4XJJA 1F8UB 1BTEA 3U74U 4AEAA 2MUPA 4OM4A 3HH7A 1MR6A 2FD6U 1FFJA 2MJ4A 1M9ZA 1CDSA 4P7UA 5DU1A 1KFHA 1UG4A 1NTXA 1CB9A 1CDTA 1FF4A 1V6PA 2MUOA 3BT1U 1FRAA 1F94A 6EBXA 1IJCA 4IYEA 1TGXA 2H62D 5DZ5A 1KBSA 1REWC 2HLRA 2X8BB 3ERAA 1QM7A 1KBAA 3BT2U 4OM5A 3NEQA 1DRSA 3FEVA 2H5FA 2BTXA 2H64C 3VTSA 1NEAA 1ABTA 2LA1A 4ZQYA 2H64B 2CRTA 1L4WA 1FASA 5IMTD 2MFAA 3EVSC 1CXOA 1CODA 2ERAA 1KU6B 4BDTB 1CXNA 1H0JA 4UY2C 2PJYC 2MHYA 1VB0A 1HC9B 1KBTA 1ERAA 2CDXA 2PJYB 1LXGA 5EBXA 2MJ0A 2UX2A 1BXPA 2HLQA 1IQ9A 2H7ZA 1JBDA 3QB4B 3KFDE
chains in the Genus database with same CATH topology
1ES7B 1ZADA 1FSCA 3LAQU 2ABXA 1S4YA 2L03A 1IDLA 2LCRA 1RL5A 1IK8A 2CCXA 1RGJA 1IDIA 1HAJA 1CVOA 1NYUA 1CDQA 1FSSB 1LSIA 1HAAA 1TXAA 4LFTA 4FAOE 1QKEA 1ERGA 1W6BA 2GOOC 1I02A 1NYSA 2H8UA 2GOOB 1JGKA 1KXIA 2MJYA 1LX5B 1CCQA 1COEA 1CREA 4DO8A 1PLOA 4KSNA 3U73U 2VLWA 4HQPF 1YWHA 3NDSA 2NBTA 5IMYC 1CRFA 2L5SA 4FAOC 1HOYA 2QC1A 4QTIU 2QJ9C 2J8BA 1NXBA 1B41B 5DO6A 1KTZB 1LJZA 2N99A 1HC9A 2BHIA 2CTXA 1G6MA 1KC4A 1TXBA 2QJAC 3PLCA 1IDHA 1XT3A 2QJBC 4BIKB 1NORA 1TFSA 2UWRA 2I9BE 4RUDA 2CRSA 1CTXA 3NH7A 1IDGA 4EY8B 2K3GA 2JQPA 1NTNA 1ONJA 1MAHF 1IKCA 1KS6A 2OFSA 2H7ZB 3EBXA 2JVEA 1QKDA 1JE9A 1CHVS 1LXHA 1KL8A 2H62C 3KFDI 1CDRA 4XJJA 1F8UB 1BTEA 3U74U 4AEAA 2MUPA 4OM4A 3HH7A 1MR6A 2FD6U 1FFJA 2MJ4A 1M9ZA 1CDSA 4P7UA 5DU1A 1KFHA 1UG4A 1NTXA 1CB9A 1CDTA 1FF4A 1V6PA 2MUOA 3BT1U 1FRAA 1F94A 6EBXA 1IJCA 4IYEA 1TGXA 2H62D 5DZ5A 1KBSA 1REWC 2HLRA 2X8BB 3ERAA 1QM7A 1KBAA 3BT2U 4OM5A 3NEQA 1DRSA 3FEVA 2H5FA 2BTXA 2H64C 3VTSA 1NEAA 1ABTA 2LA1A 4ZQYA 2H64B 2CRTA 1L4WA 1FASA 5IMTD 2MFAA 3EVSC 1CXOA 1CODA 2ERAA 1KU6B 4BDTB 1CXNA 1H0JA 4UY2C 2PJYC 2MHYA 1VB0A 1HC9B 1KBTA 1ERAA 2CDXA 2PJYB 1LXGA 5EBXA 2MJ0A 2UX2A 1BXPA 2HLQA 1IQ9A 2H7ZA 1JBDA 3QB4B 3KFDE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1ES7 B;  1ZAD A;  1FSC A;  3LAQ U;  2ABX A;  1S4Y A;  2L03 A;  1IDL A;  2LCR A;  1RL5 A;  1IK8 A;  2CCX A;  1RGJ A;  1IDI A;  1HAJ A;  1CVO A;  1NYU A;  1CDQ A;  1FSS B;  1LSI A;  1HAA A;  1TXA A;  4LFT A;  4FAO E;  1QKE A;  1ERG A;  1W6B A;  2GOO C;  1I02 A;  1NYS A;  2H8U A;  2GOO B;  1JGK A;  1KXI A;  2MJY A;  1LX5 B;  1CCQ A;  1COE A;  1CRE A;  4DO8 A;  1PLO A;  3U73 U;  2VLW A;  4HQP F;  1YWH A;  3NDS A;  2NBT A;  5IMY C;  1CRF A;  2L5S A;  4FAO C;  1HOY A;  2QC1 A;  4QTI U;  2QJ9 C;  2J8B A;  1NXB A;  1B41 B;  5DO6 A;  1KTZ B;  1LJZ A;  2N99 A;  1HC9 A;  2BHI A;  2CTX A;  1G6M A;  1KC4 A;  1TXB A;  2QJA C;  3PLC A;  1IDH A;  1XT3 A;  2QJB C;  4BIK B;  1NOR A;  1TFS A;  2UWR A;  2I9B E;  4RUD A;  2CRS A;  1CTX A;  3NH7 A;  1IDG A;  4EY8 B;  2K3G A;  2JQP A;  1NTN A;  1ONJ A;  1MAH F;  1IKC A;  1KS6 A;  2OFS A;  2H7Z B;  3EBX A;  2JVE A;  1QKD A;  1JE9 A;  1CHV S;  1LXH A;  1KL8 A;  2H62 C;  3KFD I;  1CDR A;  4XJJ A;  1F8U B;  1BTE A;  3U74 U;  4AEA A;  2MUP A;  4OM4 A;  3HH7 A;  1MR6 A;  2FD6 U;  1FFJ A;  2MJ4 A;  1M9Z A;  1CDS A;  4P7U A;  5DU1 A;  1KFH A;  1UG4 A;  1NTX A;  1CB9 A;  1CDT A;  1FF4 A;  1V6P A;  2MUO A;  3BT1 U;  1FRA A;  1F94 A;  6EBX A;  1IJC A;  4IYE A;  1TGX A;  2H62 D;  5DZ5 A;  1KBS A;  1REW C;  2HLR A;  2X8B B;  3ERA A;  1QM7 A;  1KBA A;  3BT2 U;  4OM5 A;  3NEQ A;  1DRS A;  3FEV A;  2H5F A;  2BTX A;  2H64 C;  3VTS A;  1NEA A;  1ABT A;  2LA1 A;  4ZQY A;  2H64 B;  2CRT A;  1L4W A;  1FAS A;  5IMT D;  2MFA A;  3EVS C;  1CXO A;  1COD A;  2ERA A;  1KU6 B;  4BDT B;  1CXN A;  1H0J A;  4UY2 C;  2PJY C;  2MHY A;  1VB0 A;  1HC9 B;  1KBT A;  1ERA A;  2CDX A;  2PJY B;  1LXG A;  5EBX A;  2MJ0 A;  2UX2 A;  1BXP A;  2HLQ A;  1IQ9 A;  2H7Z A;  1JBD A;  3QB4 B;  3KFD E; 
#chains in the Genus database with same CATH topology
 1ES7 B;  1ZAD A;  1FSC A;  3LAQ U;  2ABX A;  1S4Y A;  2L03 A;  1IDL A;  2LCR A;  1RL5 A;  1IK8 A;  2CCX A;  1RGJ A;  1IDI A;  1HAJ A;  1CVO A;  1NYU A;  1CDQ A;  1FSS B;  1LSI A;  1HAA A;  1TXA A;  4LFT A;  4FAO E;  1QKE A;  1ERG A;  1W6B A;  2GOO C;  1I02 A;  1NYS A;  2H8U A;  2GOO B;  1JGK A;  1KXI A;  2MJY A;  1LX5 B;  1CCQ A;  1COE A;  1CRE A;  4DO8 A;  1PLO A;  4KSN A;  3U73 U;  2VLW A;  4HQP F;  1YWH A;  3NDS A;  2NBT A;  5IMY C;  1CRF A;  2L5S A;  4FAO C;  1HOY A;  2QC1 A;  4QTI U;  2QJ9 C;  2J8B A;  1NXB A;  1B41 B;  5DO6 A;  1KTZ B;  1LJZ A;  2N99 A;  1HC9 A;  2BHI A;  2CTX A;  1G6M A;  1KC4 A;  1TXB A;  2QJA C;  3PLC A;  1IDH A;  1XT3 A;  2QJB C;  4BIK B;  1NOR A;  1TFS A;  2UWR A;  2I9B E;  4RUD A;  2CRS A;  1CTX A;  3NH7 A;  1IDG A;  4EY8 B;  2K3G A;  2JQP A;  1NTN A;  1ONJ A;  1MAH F;  1IKC A;  1KS6 A;  2OFS A;  2H7Z B;  3EBX A;  2JVE A;  1QKD A;  1JE9 A;  1CHV S;  1LXH A;  1KL8 A;  2H62 C;  3KFD I;  1CDR A;  4XJJ A;  1F8U B;  1BTE A;  3U74 U;  4AEA A;  2MUP A;  4OM4 A;  3HH7 A;  1MR6 A;  2FD6 U;  1FFJ A;  2MJ4 A;  1M9Z A;  1CDS A;  4P7U A;  5DU1 A;  1KFH A;  1UG4 A;  1NTX A;  1CB9 A;  1CDT A;  1FF4 A;  1V6P A;  2MUO A;  3BT1 U;  1FRA A;  1F94 A;  6EBX A;  1IJC A;  4IYE A;  1TGX A;  2H62 D;  5DZ5 A;  1KBS A;  1REW C;  2HLR A;  2X8B B;  3ERA A;  1QM7 A;  1KBA A;  3BT2 U;  4OM5 A;  3NEQ A;  1DRS A;  3FEV A;  2H5F A;  2BTX A;  2H64 C;  3VTS A;  1NEA A;  1ABT A;  2LA1 A;  4ZQY A;  2H64 B;  2CRT A;  1L4W A;  1FAS A;  5IMT D;  2MFA A;  3EVS C;  1CXO A;  1COD A;  2ERA A;  1KU6 B;  4BDT B;  1CXN A;  1H0J A;  4UY2 C;  2PJY C;  2MHY A;  1VB0 A;  1HC9 B;  1KBT A;  1ERA A;  2CDX A;  2PJY B;  1LXG A;  5EBX A;  2MJ0 A;  2UX2 A;  1BXP A;  2HLQ A;  1IQ9 A;  2H7Z A;  1JBD A;  3QB4 B;  3KFD E; 
#chains in the Genus database with same CATH homology
 1ES7 B;  1ZAD A;  1FSC A;  3LAQ U;  2ABX A;  1S4Y A;  2L03 A;  1IDL A;  2LCR A;  1RL5 A;  1IK8 A;  2CCX A;  1RGJ A;  1IDI A;  1HAJ A;  1CVO A;  1NYU A;  1CDQ A;  1FSS B;  1LSI A;  1HAA A;  1TXA A;  4LFT A;  4FAO E;  1QKE A;  1ERG A;  1W6B A;  2GOO C;  1I02 A;  1NYS A;  2H8U A;  2GOO B;  1JGK A;  1KXI A;  2MJY A;  1LX5 B;  1CCQ A;  1COE A;  1CRE A;  4DO8 A;  1PLO A;  4KSN A;  3U73 U;  2VLW A;  4HQP F;  1YWH A;  3NDS A;  2NBT A;  5IMY C;  1CRF A;  2L5S A;  4FAO C;  1HOY A;  2QC1 A;  4QTI U;  2QJ9 C;  2J8B A;  1NXB A;  1B41 B;  5DO6 A;  1KTZ B;  1LJZ A;  2N99 A;  1HC9 A;  2BHI A;  2CTX A;  1G6M A;  1KC4 A;  1TXB A;  2QJA C;  3PLC A;  1IDH A;  1XT3 A;  2QJB C;  4BIK B;  1NOR A;  1TFS A;  2UWR A;  2I9B E;  4RUD A;  2CRS A;  1CTX A;  3NH7 A;  1IDG A;  4EY8 B;  2K3G A;  2JQP A;  1NTN A;  1ONJ A;  1MAH F;  1IKC A;  1KS6 A;  2OFS A;  2H7Z B;  3EBX A;  2JVE A;  1QKD A;  1JE9 A;  1CHV S;  1LXH A;  1KL8 A;  2H62 C;  3KFD I;  1CDR A;  4XJJ A;  1F8U B;  1BTE A;  3U74 U;  4AEA A;  2MUP A;  4OM4 A;  3HH7 A;  1MR6 A;  2FD6 U;  1FFJ A;  2MJ4 A;  1M9Z A;  1CDS A;  4P7U A;  5DU1 A;  1KFH A;  1UG4 A;  1NTX A;  1CB9 A;  1CDT A;  1FF4 A;  1V6P A;  2MUO A;  3BT1 U;  1FRA A;  1F94 A;  6EBX A;  1IJC A;  4IYE A;  1TGX A;  2H62 D;  5DZ5 A;  1KBS A;  1REW C;  2HLR A;  2X8B B;  3ERA A;  1QM7 A;  1KBA A;  3BT2 U;  4OM5 A;  3NEQ A;  1DRS A;  3FEV A;  2H5F A;  2BTX A;  2H64 C;  3VTS A;  1NEA A;  1ABT A;  2LA1 A;  4ZQY A;  2H64 B;  2CRT A;  1L4W A;  1FAS A;  5IMT D;  2MFA A;  3EVS C;  1CXO A;  1COD A;  2ERA A;  1KU6 B;  4BDT B;  1CXN A;  1H0J A;  4UY2 C;  2PJY C;  2MHY A;  1VB0 A;  1HC9 B;  1KBT A;  1ERA A;  2CDX A;  2PJY B;  1LXG A;  5EBX A;  2MJ0 A;  2UX2 A;  1BXP A;  2HLQ A;  1IQ9 A;  2H7Z A;  1JBD A;  3QB4 B;  3KFD E; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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