2UX2A

High resolution structure of human cd59
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
78
structure length
78
Chain Sequence
MLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLEN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Immune system
molecule keywords CD59 GLYCOPROTEIN
publication title High-Resolution Structures of Bacterially Expressed Soluble Human Cd59.
pubmed doi rcsb
source organism Homo sapiens
total genus 20
structure length 78
sequence length 78
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2007-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00021 UPAR_LY6 u-PAR/Ly-6 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2ux2A00
1IQ9A 2J8BA 1IDHA 1RL5A 1IKCA 2FD6U 1CXNA 1TGXA 3EVSC 2H7ZA 1HAJA 1S4YA 5DZ5A 2CRTA 2CTXA 1F8UB 3PLCA 2HLRA 3ERAA 2K3GA 2PJYB 1CRFA 1KL8A 3U74U 2ERAA 1V6PA 3HH7A 1NTNA 1B41B 1CDTA 2H64C 1M9ZA 2MHYA 1TXBA 2L5SA 3U73U 1JBDA 1HC9A 1NXBA 3NH7A 1BTEA 3BT1U 2CCXA 1KS6A 1CTXA 1NEAA 1H0JA 1CCQA 2H7ZB 2MJ0A 1PLOA 4DO8A 1KXIA 2H64B 4UY2C 1JGKA 1FFJA 1QM7A 2H5FA 1BXPA 1W6BA 1ES7B 2LA1A 4RUDA 1FF4A 1HOYA 2MUPA 4EY8B 1LSIA 4FAOC 3KFDE 2N99A 1HC9B 1ABTA 2UWRA 2QJBC 1LX5B 2MFAA 2MUOA 2ABXA 1IDIA 1NYSA 1LXHA 2QJ9C 2UX2A 1CDRA 1KTZB 4HQPF 1RGJA 3LAQU 3BT2U 1KBSA 1L4WA 1NYUA 1CREA 1CB9A 2LCRA 1FASA 2VLWA 2GOOC 1F94A 4P7UA 1TFSA 1KBTA 2X8BB 1IK8A 1KC4A 1CDSA 1YWHA 2H62D 1TXAA 1XT3A 5DU1A 1CHVS 1KU6B 4FAOE 2I9BE 2OFSA 4QTIU 3KFDI 4AEAA 5EBXA 2H8UA 2L03A 1KFHA 1IJCA 1LXGA 1FSCA 2BTXA 1FRAA 1QKEA 1ERAA 1HAAA 1REWC 2JVEA 4ZQYA 2MJ4A 2CRSA 5DO6A 4BDTB 1KBAA 5IMTD 1IDGA 1CDQA 3VTSA 1QKDA 2MJYA 4OM5A 1CXOA 2QC1A 1NORA 2BHIA 4LFTA 4BIKB 6EBXA 2H62C 4OM4A 1IDLA 1MAHF 2QJAC 4IYEA 3EBXA 1ONJA 1ERGA 3FEVA 1LJZA 1ZADA 2HLQA 1DRSA 1COEA 1CVOA 2CDXA 3NDSA 5IMYC 1FSSB 1G6MA 2GOOB 1I02A 1UG4A 4XJJA 1CODA 1NTXA 1MR6A 3QB4B 1VB0A 2NBTA 3NEQA 1JE9A 2PJYC 2JQPA
chains in the Genus database with same CATH superfamily
1IQ9A 2J8BA 1IDHA 1RL5A 1IKCA 2FD6U 1CXNA 1TGXA 3EVSC 2H7ZA 1HAJA 1S4YA 5DZ5A 2CRTA 2CTXA 1F8UB 3PLCA 2HLRA 3ERAA 2K3GA 2PJYB 1CRFA 1KL8A 3U74U 2ERAA 1V6PA 3HH7A 1NTNA 1B41B 1CDTA 2H64C 1M9ZA 2MHYA 1TXBA 2L5SA 3U73U 1JBDA 1HC9A 1NXBA 3NH7A 1BTEA 3BT1U 2CCXA 1KS6A 1CTXA 1NEAA 1H0JA 1CCQA 2H7ZB 2MJ0A 1PLOA 4DO8A 1KXIA 2H64B 4UY2C 1JGKA 1FFJA 1QM7A 2H5FA 1BXPA 1W6BA 1ES7B 2LA1A 4RUDA 1FF4A 1HOYA 2MUPA 4EY8B 1LSIA 4FAOC 3KFDE 2N99A 1HC9B 1ABTA 2UWRA 2QJBC 1LX5B 2MFAA 2MUOA 2ABXA 1IDIA 1NYSA 1LXHA 2QJ9C 2UX2A 1CDRA 1KTZB 4HQPF 1RGJA 3LAQU 3BT2U 1KBSA 1L4WA 1NYUA 1CREA 1CB9A 2LCRA 1FASA 2VLWA 2GOOC 1F94A 4P7UA 1TFSA 1KBTA 2X8BB 1IK8A 1KC4A 1CDSA 1YWHA 2H62D 1TXAA 1XT3A 5DU1A 1CHVS 1KU6B 4FAOE 2I9BE 2OFSA 4QTIU 3KFDI 4AEAA 5EBXA 2H8UA 2L03A 1KFHA 1IJCA 1LXGA 1FSCA 2BTXA 1FRAA 1QKEA 1ERAA 1HAAA 1REWC 2JVEA 4ZQYA 2MJ4A 2CRSA 5DO6A 4BDTB 1KBAA 5IMTD 1IDGA 1CDQA 3VTSA 1QKDA 2MJYA 4OM5A 1CXOA 2QC1A 1NORA 2BHIA 4LFTA 4BIKB 6EBXA 2H62C 4OM4A 1IDLA 1MAHF 2QJAC 4IYEA 3EBXA 1ONJA 1ERGA 3FEVA 1LJZA 1ZADA 2HLQA 1DRSA 1COEA 1CVOA 2CDXA 3NDSA 5IMYC 1FSSB 1G6MA 2GOOB 1I02A 1UG4A 4KSNA 4XJJA 1CODA 1NTXA 1MR6A 3QB4B 1VB0A 2NBTA 3NEQA 1JE9A 2PJYC 2JQPA
chains in the Genus database with same CATH topology
1IQ9A 2J8BA 1IDHA 1RL5A 1IKCA 2FD6U 1CXNA 1TGXA 3EVSC 2H7ZA 1HAJA 1S4YA 5DZ5A 2CRTA 2CTXA 1F8UB 3PLCA 2HLRA 3ERAA 2K3GA 2PJYB 1CRFA 1KL8A 3U74U 2ERAA 1V6PA 3HH7A 1NTNA 1B41B 1CDTA 2H64C 1M9ZA 2MHYA 1TXBA 2L5SA 3U73U 1JBDA 1HC9A 1NXBA 3NH7A 1BTEA 3BT1U 2CCXA 1KS6A 1CTXA 1NEAA 1H0JA 1CCQA 2H7ZB 2MJ0A 1PLOA 4DO8A 1KXIA 2H64B 4UY2C 1JGKA 1FFJA 1QM7A 2H5FA 1BXPA 1W6BA 1ES7B 2LA1A 4RUDA 1FF4A 1HOYA 2MUPA 4EY8B 1LSIA 4FAOC 3KFDE 2N99A 1HC9B 1ABTA 2UWRA 2QJBC 1LX5B 2MFAA 2MUOA 2ABXA 1IDIA 1NYSA 1LXHA 2QJ9C 2UX2A 1CDRA 1KTZB 4HQPF 1RGJA 3LAQU 3BT2U 1KBSA 1L4WA 1NYUA 1CREA 1CB9A 2LCRA 1FASA 2VLWA 2GOOC 1F94A 4P7UA 1TFSA 1KBTA 2X8BB 1IK8A 1KC4A 1CDSA 1YWHA 2H62D 1TXAA 1XT3A 5DU1A 1CHVS 1KU6B 4FAOE 2I9BE 2OFSA 4QTIU 3KFDI 4AEAA 5EBXA 2H8UA 2L03A 1KFHA 1IJCA 1LXGA 1FSCA 2BTXA 1FRAA 1QKEA 1ERAA 1HAAA 1REWC 2JVEA 4ZQYA 2MJ4A 2CRSA 5DO6A 4BDTB 1KBAA 5IMTD 1IDGA 1CDQA 3VTSA 1QKDA 2MJYA 4OM5A 1CXOA 2QC1A 1NORA 2BHIA 4LFTA 4BIKB 6EBXA 2H62C 4OM4A 1IDLA 1MAHF 2QJAC 4IYEA 3EBXA 1ONJA 1ERGA 3FEVA 1LJZA 1ZADA 2HLQA 1DRSA 1COEA 1CVOA 2CDXA 3NDSA 5IMYC 1FSSB 1G6MA 2GOOB 1I02A 1UG4A 4KSNA 4XJJA 1CODA 1NTXA 1MR6A 3QB4B 1VB0A 2NBTA 3NEQA 1JE9A 2PJYC 2JQPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1IQ9 A;  2J8B A;  1IDH A;  1RL5 A;  1IKC A;  2FD6 U;  1CXN A;  1TGX A;  3EVS C;  2H7Z A;  1HAJ A;  1S4Y A;  5DZ5 A;  2CRT A;  2CTX A;  1F8U B;  3PLC A;  2HLR A;  3ERA A;  2K3G A;  2PJY B;  1CRF A;  1KL8 A;  3U74 U;  2ERA A;  1V6P A;  3HH7 A;  1NTN A;  1B41 B;  1CDT A;  2H64 C;  1M9Z A;  2MHY A;  1TXB A;  2L5S A;  3U73 U;  1JBD A;  1HC9 A;  1NXB A;  3NH7 A;  1BTE A;  3BT1 U;  2CCX A;  1KS6 A;  1CTX A;  1NEA A;  1H0J A;  1CCQ A;  2H7Z B;  2MJ0 A;  1PLO A;  4DO8 A;  1KXI A;  2H64 B;  4UY2 C;  1JGK A;  1FFJ A;  1QM7 A;  2H5F A;  1BXP A;  1W6B A;  1ES7 B;  2LA1 A;  4RUD A;  1FF4 A;  1HOY A;  2MUP A;  4EY8 B;  1LSI A;  4FAO C;  3KFD E;  2N99 A;  1HC9 B;  1ABT A;  2UWR A;  2QJB C;  1LX5 B;  2MFA A;  2MUO A;  2ABX A;  1IDI A;  1NYS A;  1LXH A;  2QJ9 C;  2UX2 A;  1CDR A;  1KTZ B;  4HQP F;  1RGJ A;  3LAQ U;  3BT2 U;  1KBS A;  1L4W A;  1NYU A;  1CRE A;  1CB9 A;  2LCR A;  1FAS A;  2VLW A;  2GOO C;  1F94 A;  4P7U A;  1TFS A;  1KBT A;  2X8B B;  1IK8 A;  1KC4 A;  1CDS A;  1YWH A;  2H62 D;  1TXA A;  1XT3 A;  5DU1 A;  1CHV S;  1KU6 B;  4FAO E;  2I9B E;  2OFS A;  4QTI U;  3KFD I;  4AEA A;  5EBX A;  2H8U A;  2L03 A;  1KFH A;  1IJC A;  1LXG A;  1FSC A;  2BTX A;  1FRA A;  1QKE A;  1ERA A;  1HAA A;  1REW C;  2JVE A;  4ZQY A;  2MJ4 A;  2CRS A;  5DO6 A;  4BDT B;  1KBA A;  5IMT D;  1IDG A;  1CDQ A;  3VTS A;  1QKD A;  2MJY A;  4OM5 A;  1CXO A;  2QC1 A;  1NOR A;  2BHI A;  4LFT A;  4BIK B;  6EBX A;  2H62 C;  4OM4 A;  1IDL A;  1MAH F;  2QJA C;  4IYE A;  3EBX A;  1ONJ A;  1ERG A;  3FEV A;  1LJZ A;  1ZAD A;  2HLQ A;  1DRS A;  1COE A;  1CVO A;  2CDX A;  3NDS A;  5IMY C;  1FSS B;  1G6M A;  2GOO B;  1I02 A;  1UG4 A;  4XJJ A;  1COD A;  1NTX A;  1MR6 A;  3QB4 B;  1VB0 A;  2NBT A;  3NEQ A;  1JE9 A;  2PJY C;  2JQP A; 
#chains in the Genus database with same CATH topology
 1IQ9 A;  2J8B A;  1IDH A;  1RL5 A;  1IKC A;  2FD6 U;  1CXN A;  1TGX A;  3EVS C;  2H7Z A;  1HAJ A;  1S4Y A;  5DZ5 A;  2CRT A;  2CTX A;  1F8U B;  3PLC A;  2HLR A;  3ERA A;  2K3G A;  2PJY B;  1CRF A;  1KL8 A;  3U74 U;  2ERA A;  1V6P A;  3HH7 A;  1NTN A;  1B41 B;  1CDT A;  2H64 C;  1M9Z A;  2MHY A;  1TXB A;  2L5S A;  3U73 U;  1JBD A;  1HC9 A;  1NXB A;  3NH7 A;  1BTE A;  3BT1 U;  2CCX A;  1KS6 A;  1CTX A;  1NEA A;  1H0J A;  1CCQ A;  2H7Z B;  2MJ0 A;  1PLO A;  4DO8 A;  1KXI A;  2H64 B;  4UY2 C;  1JGK A;  1FFJ A;  1QM7 A;  2H5F A;  1BXP A;  1W6B A;  1ES7 B;  2LA1 A;  4RUD A;  1FF4 A;  1HOY A;  2MUP A;  4EY8 B;  1LSI A;  4FAO C;  3KFD E;  2N99 A;  1HC9 B;  1ABT A;  2UWR A;  2QJB C;  1LX5 B;  2MFA A;  2MUO A;  2ABX A;  1IDI A;  1NYS A;  1LXH A;  2QJ9 C;  2UX2 A;  1CDR A;  1KTZ B;  4HQP F;  1RGJ A;  3LAQ U;  3BT2 U;  1KBS A;  1L4W A;  1NYU A;  1CRE A;  1CB9 A;  2LCR A;  1FAS A;  2VLW A;  2GOO C;  1F94 A;  4P7U A;  1TFS A;  1KBT A;  2X8B B;  1IK8 A;  1KC4 A;  1CDS A;  1YWH A;  2H62 D;  1TXA A;  1XT3 A;  5DU1 A;  1CHV S;  1KU6 B;  4FAO E;  2I9B E;  2OFS A;  4QTI U;  3KFD I;  4AEA A;  5EBX A;  2H8U A;  2L03 A;  1KFH A;  1IJC A;  1LXG A;  1FSC A;  2BTX A;  1FRA A;  1QKE A;  1ERA A;  1HAA A;  1REW C;  2JVE A;  4ZQY A;  2MJ4 A;  2CRS A;  5DO6 A;  4BDT B;  1KBA A;  5IMT D;  1IDG A;  1CDQ A;  3VTS A;  1QKD A;  2MJY A;  4OM5 A;  1CXO A;  2QC1 A;  1NOR A;  2BHI A;  4LFT A;  4BIK B;  6EBX A;  2H62 C;  4OM4 A;  1IDL A;  1MAH F;  2QJA C;  4IYE A;  3EBX A;  1ONJ A;  1ERG A;  3FEV A;  1LJZ A;  1ZAD A;  2HLQ A;  1DRS A;  1COE A;  1CVO A;  2CDX A;  3NDS A;  5IMY C;  1FSS B;  1G6M A;  2GOO B;  1I02 A;  1UG4 A;  4KSN A;  4XJJ A;  1COD A;  1NTX A;  1MR6 A;  3QB4 B;  1VB0 A;  2NBT A;  3NEQ A;  1JE9 A;  2PJY C;  2JQP A; 
#chains in the Genus database with same CATH homology
 1IQ9 A;  2J8B A;  1IDH A;  1RL5 A;  1IKC A;  2FD6 U;  1CXN A;  1TGX A;  3EVS C;  2H7Z A;  1HAJ A;  1S4Y A;  5DZ5 A;  2CRT A;  2CTX A;  1F8U B;  3PLC A;  2HLR A;  3ERA A;  2K3G A;  2PJY B;  1CRF A;  1KL8 A;  3U74 U;  2ERA A;  1V6P A;  3HH7 A;  1NTN A;  1B41 B;  1CDT A;  2H64 C;  1M9Z A;  2MHY A;  1TXB A;  2L5S A;  3U73 U;  1JBD A;  1HC9 A;  1NXB A;  3NH7 A;  1BTE A;  3BT1 U;  2CCX A;  1KS6 A;  1CTX A;  1NEA A;  1H0J A;  1CCQ A;  2H7Z B;  2MJ0 A;  1PLO A;  4DO8 A;  1KXI A;  2H64 B;  4UY2 C;  1JGK A;  1FFJ A;  1QM7 A;  2H5F A;  1BXP A;  1W6B A;  1ES7 B;  2LA1 A;  4RUD A;  1FF4 A;  1HOY A;  2MUP A;  4EY8 B;  1LSI A;  4FAO C;  3KFD E;  2N99 A;  1HC9 B;  1ABT A;  2UWR A;  2QJB C;  1LX5 B;  2MFA A;  2MUO A;  2ABX A;  1IDI A;  1NYS A;  1LXH A;  2QJ9 C;  2UX2 A;  1CDR A;  1KTZ B;  4HQP F;  1RGJ A;  3LAQ U;  3BT2 U;  1KBS A;  1L4W A;  1NYU A;  1CRE A;  1CB9 A;  2LCR A;  1FAS A;  2VLW A;  2GOO C;  1F94 A;  4P7U A;  1TFS A;  1KBT A;  2X8B B;  1IK8 A;  1KC4 A;  1CDS A;  1YWH A;  2H62 D;  1TXA A;  1XT3 A;  5DU1 A;  1CHV S;  1KU6 B;  4FAO E;  2I9B E;  2OFS A;  4QTI U;  3KFD I;  4AEA A;  5EBX A;  2H8U A;  2L03 A;  1KFH A;  1IJC A;  1LXG A;  1FSC A;  2BTX A;  1FRA A;  1QKE A;  1ERA A;  1HAA A;  1REW C;  2JVE A;  4ZQY A;  2MJ4 A;  2CRS A;  5DO6 A;  4BDT B;  1KBA A;  5IMT D;  1IDG A;  1CDQ A;  3VTS A;  1QKD A;  2MJY A;  4OM5 A;  1CXO A;  2QC1 A;  1NOR A;  2BHI A;  4LFT A;  4BIK B;  6EBX A;  2H62 C;  4OM4 A;  1IDL A;  1MAH F;  2QJA C;  4IYE A;  3EBX A;  1ONJ A;  1ERG A;  3FEV A;  1LJZ A;  1ZAD A;  2HLQ A;  1DRS A;  1COE A;  1CVO A;  2CDX A;  3NDS A;  5IMY C;  1FSS B;  1G6M A;  2GOO B;  1I02 A;  1UG4 A;  4KSN A;  4XJJ A;  1COD A;  1NTX A;  1MR6 A;  3QB4 B;  1VB0 A;  2NBT A;  3NEQ A;  1JE9 A;  2PJY C;  2JQP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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