3EVSC

Crystal structure of the gdf-5:bmp receptor ib complex.
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
85
structure length
85
Chain Sequence
b'ILRCKCHHHCPEDSVNNICSTDGYCFTMIEEDDSGMPVVTSGCLGLEGSDFQCRDTPIPHQRRSIECCTERNECNKDLHPTLPPL'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure analysis reveals a spring-loaded latch as molecular mechanism for GDF-5-type I receptor specificity.
pubmed doi rcsb
molecule keywords Growth/differentiation factor 5
source organism Homo sapiens
molecule tags Cytokine/transferase receptor
total genus 16
structure length 85
sequence length 85
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2008-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01064 Activin_recp Activin types I and II receptor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 3evsC00
3BT2U 1FF4A 1CODA 2ABXA 1QKDA 1CHVS 1RL5A 1CTXA 1KTZB 2CRSA 1TGXA 3NDSA 1HAAA 1HC9B 2MFAA 1QM7A 3U74U 1I02A 4DO8A 1LX5B 4P7UA 1ERGA 1IDIA 2GOOC 1IDHA 2K3GA 2X8BB 1CDQA 4BIKB 1RGJA 4BDTB 1FSSB 2H62C 1IQ9A 1F94A 2QC1A 2CTXA 1REWC 1L4WA 1KC4A 1HAJA 1FSCA 1BTEA 2J8BA 4RUDA 2NBTA 3QB4B 1YWHA 4HQPF 4ZQYA 1ONJA 2H7ZA 2CCXA 2L5SA 1TXBA 2ERAA 5EBXA 1QKEA 1ZADA 5DU1A 2H5FA 4QTIU 1COEA 1NTXA 3NH7A 1UG4A 1CXNA 1LJZA 2BTXA 2PJYC 2MJ4A 1DRSA 1ES7B 1IKCA 2BHIA 2I9BE 2MJYA 2QJBC 1G6MA 5DZ5A 2L03A 1V6PA 2H64C 3KFDI 3PLCA 2JVEA 1CREA 1TFSA 3VTSA 2LCRA 5IMTD 4AEAA 2H7ZB 1LXHA 1NTNA 1TXAA 1HOYA 5DO6A 1NXBA 2MJ0A 4UY2C 1IDGA 3EVSC 2HLRA 2GOOB 4OM4A 1KFHA 2CDXA 1NEAA 3FEVA 4OM5A 2UWRA 2MUPA 1KBAA 1LSIA 2OFSA 3LAQU 4XJJA 1XT3A 1KU6B 1CDTA 1MR6A 2H62D 2MHYA 1CDSA 1FFJA 1W6BA 1CVOA 2HLQA 3HH7A 3KFDE 4LFTA 2JQPA 1H0JA 1ERAA 3BT1U 1IJCA 2QJAC 2UX2A 3U73U 1CXOA 1KBTA 6EBXA 5IMYC 1PLOA 2N99A 1MAHF 1CB9A 1B41B 3ERAA 3EBXA 3NEQA 1JE9A 2PJYB 2VLWA 1CDRA 2H8UA 1IK8A 2FD6U 1KXIA 4FAOC 2LA1A 2QJ9C 1FRAA 1S4YA 1HC9A 1IDLA 2H64B 1JBDA 1BXPA 1CRFA 4EY8B 1ABTA 2CRTA 1VB0A 1NYSA 1M9ZA 1CCQA 1NORA 2MUOA 1F8UB 1KL8A 4FAOE 1KS6A 4IYEA 1KBSA 1NYUA 1JGKA 1FASA 1LXGA
chains in the Genus database with same CATH superfamily
3BT2U 1FF4A 1CODA 2ABXA 1QKDA 1CHVS 1RL5A 1CTXA 1KTZB 2CRSA 1TGXA 3NDSA 1HAAA 1HC9B 2MFAA 1QM7A 3U74U 1I02A 4DO8A 1LX5B 4P7UA 1ERGA 1IDIA 2GOOC 1IDHA 2K3GA 2X8BB 1CDQA 4BIKB 1RGJA 4BDTB 1FSSB 2H62C 1IQ9A 1F94A 2QC1A 2CTXA 1REWC 1L4WA 1KC4A 1HAJA 1FSCA 1BTEA 2J8BA 4RUDA 2NBTA 3QB4B 1YWHA 4HQPF 4ZQYA 1ONJA 2H7ZA 2CCXA 2L5SA 1TXBA 2ERAA 5EBXA 1QKEA 1ZADA 5DU1A 2H5FA 4QTIU 1COEA 1NTXA 3NH7A 1UG4A 1CXNA 1LJZA 2BTXA 2PJYC 2MJ4A 1DRSA 1ES7B 1IKCA 2BHIA 2I9BE 2MJYA 2QJBC 1G6MA 5DZ5A 2L03A 1V6PA 2H64C 3KFDI 3PLCA 2JVEA 1CREA 1TFSA 3VTSA 2LCRA 5IMTD 4AEAA 2H7ZB 1LXHA 1NTNA 1TXAA 1HOYA 5DO6A 1NXBA 2MJ0A 4UY2C 1IDGA 3EVSC 2HLRA 2GOOB 4OM4A 1KFHA 2CDXA 1NEAA 3FEVA 4OM5A 2UWRA 2MUPA 1KBAA 1LSIA 2OFSA 3LAQU 4XJJA 1XT3A 1KU6B 1CDTA 1MR6A 2H62D 2MHYA 1CDSA 1FFJA 1W6BA 1CVOA 2HLQA 3HH7A 3KFDE 4LFTA 2JQPA 1H0JA 1ERAA 3BT1U 1IJCA 2QJAC 2UX2A 3U73U 1CXOA 1KBTA 6EBXA 5IMYC 1PLOA 2N99A 1MAHF 1CB9A 1B41B 3ERAA 3EBXA 3NEQA 1JE9A 2PJYB 2VLWA 1CDRA 2H8UA 1IK8A 2FD6U 1KXIA 4KSNA 4FAOC 2LA1A 2QJ9C 1FRAA 1S4YA 1HC9A 1IDLA 2H64B 1JBDA 1BXPA 1CRFA 4EY8B 1ABTA 2CRTA 1VB0A 1NYSA 1M9ZA 1CCQA 1NORA 2MUOA 1F8UB 1KL8A 4FAOE 1KS6A 4IYEA 1KBSA 1NYUA 1JGKA 1FASA 1LXGA
chains in the Genus database with same CATH topology
3BT2U 1FF4A 1CODA 2ABXA 1QKDA 1CHVS 1RL5A 1CTXA 1KTZB 2CRSA 1TGXA 3NDSA 1HAAA 1HC9B 2MFAA 1QM7A 3U74U 1I02A 4DO8A 1LX5B 4P7UA 1ERGA 1IDIA 2GOOC 1IDHA 2K3GA 2X8BB 1CDQA 4BIKB 1RGJA 4BDTB 1FSSB 2H62C 1IQ9A 1F94A 2QC1A 2CTXA 1REWC 1L4WA 1KC4A 1HAJA 1FSCA 1BTEA 2J8BA 4RUDA 2NBTA 3QB4B 1YWHA 4HQPF 4ZQYA 1ONJA 2H7ZA 2CCXA 2L5SA 1TXBA 2ERAA 5EBXA 1QKEA 1ZADA 5DU1A 2H5FA 4QTIU 1COEA 1NTXA 3NH7A 1UG4A 1CXNA 1LJZA 2BTXA 2PJYC 2MJ4A 1DRSA 1ES7B 1IKCA 2BHIA 2I9BE 2MJYA 2QJBC 1G6MA 5DZ5A 2L03A 1V6PA 2H64C 3KFDI 3PLCA 2JVEA 1CREA 1TFSA 3VTSA 2LCRA 5IMTD 4AEAA 2H7ZB 1LXHA 1NTNA 1TXAA 1HOYA 5DO6A 1NXBA 2MJ0A 4UY2C 1IDGA 3EVSC 2HLRA 2GOOB 4OM4A 1KFHA 2CDXA 1NEAA 3FEVA 4OM5A 2UWRA 2MUPA 1KBAA 1LSIA 2OFSA 3LAQU 4XJJA 1XT3A 1KU6B 1CDTA 1MR6A 2H62D 2MHYA 1CDSA 1FFJA 1W6BA 1CVOA 2HLQA 3HH7A 3KFDE 4LFTA 2JQPA 1H0JA 1ERAA 3BT1U 1IJCA 2QJAC 2UX2A 3U73U 1CXOA 1KBTA 6EBXA 5IMYC 1PLOA 2N99A 1MAHF 1CB9A 1B41B 3ERAA 3EBXA 3NEQA 1JE9A 2PJYB 2VLWA 1CDRA 2H8UA 1IK8A 2FD6U 1KXIA 4KSNA 4FAOC 2LA1A 2QJ9C 1FRAA 1S4YA 1HC9A 1IDLA 2H64B 1JBDA 1BXPA 1CRFA 4EY8B 1ABTA 2CRTA 1VB0A 1NYSA 1M9ZA 1CCQA 1NORA 2MUOA 1F8UB 1KL8A 4FAOE 1KS6A 4IYEA 1KBSA 1NYUA 1JGKA 1FASA 1LXGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BT2 U;  1FF4 A;  1COD A;  2ABX A;  1QKD A;  1CHV S;  1RL5 A;  1CTX A;  1KTZ B;  2CRS A;  1TGX A;  3NDS A;  1HAA A;  1HC9 B;  2MFA A;  1QM7 A;  3U74 U;  1I02 A;  4DO8 A;  1LX5 B;  4P7U A;  1ERG A;  1IDI A;  2GOO C;  1IDH A;  2K3G A;  2X8B B;  1CDQ A;  4BIK B;  1RGJ A;  4BDT B;  1FSS B;  2H62 C;  1IQ9 A;  1F94 A;  2QC1 A;  2CTX A;  1REW C;  1L4W A;  1KC4 A;  1HAJ A;  1FSC A;  1BTE A;  2J8B A;  4RUD A;  2NBT A;  3QB4 B;  1YWH A;  4HQP F;  4ZQY A;  1ONJ A;  2H7Z A;  2CCX A;  2L5S A;  1TXB A;  2ERA A;  5EBX A;  1QKE A;  1ZAD A;  5DU1 A;  2H5F A;  4QTI U;  1COE A;  1NTX A;  3NH7 A;  1UG4 A;  1CXN A;  1LJZ A;  2BTX A;  2PJY C;  2MJ4 A;  1DRS A;  1ES7 B;  1IKC A;  2BHI A;  2I9B E;  2MJY A;  2QJB C;  1G6M A;  5DZ5 A;  2L03 A;  1V6P A;  2H64 C;  3KFD I;  3PLC A;  2JVE A;  1CRE A;  1TFS A;  3VTS A;  2LCR A;  5IMT D;  4AEA A;  2H7Z B;  1LXH A;  1NTN A;  1TXA A;  1HOY A;  5DO6 A;  1NXB A;  2MJ0 A;  4UY2 C;  1IDG A;  3EVS C;  2HLR A;  2GOO B;  4OM4 A;  1KFH A;  2CDX A;  1NEA A;  3FEV A;  4OM5 A;  2UWR A;  2MUP A;  1KBA A;  1LSI A;  2OFS A;  3LAQ U;  4XJJ A;  1XT3 A;  1KU6 B;  1CDT A;  1MR6 A;  2H62 D;  2MHY A;  1CDS A;  1FFJ A;  1W6B A;  1CVO A;  2HLQ A;  3HH7 A;  3KFD E;  4LFT A;  2JQP A;  1H0J A;  1ERA A;  3BT1 U;  1IJC A;  2QJA C;  2UX2 A;  3U73 U;  1CXO A;  1KBT A;  6EBX A;  5IMY C;  1PLO A;  2N99 A;  1MAH F;  1CB9 A;  1B41 B;  3ERA A;  3EBX A;  3NEQ A;  1JE9 A;  2PJY B;  2VLW A;  1CDR A;  2H8U A;  1IK8 A;  2FD6 U;  1KXI A;  4FAO C;  2LA1 A;  2QJ9 C;  1FRA A;  1S4Y A;  1HC9 A;  1IDL A;  2H64 B;  1JBD A;  1BXP A;  1CRF A;  4EY8 B;  1ABT A;  2CRT A;  1VB0 A;  1NYS A;  1M9Z A;  1CCQ A;  1NOR A;  2MUO A;  1F8U B;  1KL8 A;  4FAO E;  1KS6 A;  4IYE A;  1KBS A;  1NYU A;  1JGK A;  1FAS A;  1LXG A; 
#chains in the Genus database with same CATH topology
 3BT2 U;  1FF4 A;  1COD A;  2ABX A;  1QKD A;  1CHV S;  1RL5 A;  1CTX A;  1KTZ B;  2CRS A;  1TGX A;  3NDS A;  1HAA A;  1HC9 B;  2MFA A;  1QM7 A;  3U74 U;  1I02 A;  4DO8 A;  1LX5 B;  4P7U A;  1ERG A;  1IDI A;  2GOO C;  1IDH A;  2K3G A;  2X8B B;  1CDQ A;  4BIK B;  1RGJ A;  4BDT B;  1FSS B;  2H62 C;  1IQ9 A;  1F94 A;  2QC1 A;  2CTX A;  1REW C;  1L4W A;  1KC4 A;  1HAJ A;  1FSC A;  1BTE A;  2J8B A;  4RUD A;  2NBT A;  3QB4 B;  1YWH A;  4HQP F;  4ZQY A;  1ONJ A;  2H7Z A;  2CCX A;  2L5S A;  1TXB A;  2ERA A;  5EBX A;  1QKE A;  1ZAD A;  5DU1 A;  2H5F A;  4QTI U;  1COE A;  1NTX A;  3NH7 A;  1UG4 A;  1CXN A;  1LJZ A;  2BTX A;  2PJY C;  2MJ4 A;  1DRS A;  1ES7 B;  1IKC A;  2BHI A;  2I9B E;  2MJY A;  2QJB C;  1G6M A;  5DZ5 A;  2L03 A;  1V6P A;  2H64 C;  3KFD I;  3PLC A;  2JVE A;  1CRE A;  1TFS A;  3VTS A;  2LCR A;  5IMT D;  4AEA A;  2H7Z B;  1LXH A;  1NTN A;  1TXA A;  1HOY A;  5DO6 A;  1NXB A;  2MJ0 A;  4UY2 C;  1IDG A;  3EVS C;  2HLR A;  2GOO B;  4OM4 A;  1KFH A;  2CDX A;  1NEA A;  3FEV A;  4OM5 A;  2UWR A;  2MUP A;  1KBA A;  1LSI A;  2OFS A;  3LAQ U;  4XJJ A;  1XT3 A;  1KU6 B;  1CDT A;  1MR6 A;  2H62 D;  2MHY A;  1CDS A;  1FFJ A;  1W6B A;  1CVO A;  2HLQ A;  3HH7 A;  3KFD E;  4LFT A;  2JQP A;  1H0J A;  1ERA A;  3BT1 U;  1IJC A;  2QJA C;  2UX2 A;  3U73 U;  1CXO A;  1KBT A;  6EBX A;  5IMY C;  1PLO A;  2N99 A;  1MAH F;  1CB9 A;  1B41 B;  3ERA A;  3EBX A;  3NEQ A;  1JE9 A;  2PJY B;  2VLW A;  1CDR A;  2H8U A;  1IK8 A;  2FD6 U;  1KXI A;  4KSN A;  4FAO C;  2LA1 A;  2QJ9 C;  1FRA A;  1S4Y A;  1HC9 A;  1IDL A;  2H64 B;  1JBD A;  1BXP A;  1CRF A;  4EY8 B;  1ABT A;  2CRT A;  1VB0 A;  1NYS A;  1M9Z A;  1CCQ A;  1NOR A;  2MUO A;  1F8U B;  1KL8 A;  4FAO E;  1KS6 A;  4IYE A;  1KBS A;  1NYU A;  1JGK A;  1FAS A;  1LXG A; 
#chains in the Genus database with same CATH homology
 3BT2 U;  1FF4 A;  1COD A;  2ABX A;  1QKD A;  1CHV S;  1RL5 A;  1CTX A;  1KTZ B;  2CRS A;  1TGX A;  3NDS A;  1HAA A;  1HC9 B;  2MFA A;  1QM7 A;  3U74 U;  1I02 A;  4DO8 A;  1LX5 B;  4P7U A;  1ERG A;  1IDI A;  2GOO C;  1IDH A;  2K3G A;  2X8B B;  1CDQ A;  4BIK B;  1RGJ A;  4BDT B;  1FSS B;  2H62 C;  1IQ9 A;  1F94 A;  2QC1 A;  2CTX A;  1REW C;  1L4W A;  1KC4 A;  1HAJ A;  1FSC A;  1BTE A;  2J8B A;  4RUD A;  2NBT A;  3QB4 B;  1YWH A;  4HQP F;  4ZQY A;  1ONJ A;  2H7Z A;  2CCX A;  2L5S A;  1TXB A;  2ERA A;  5EBX A;  1QKE A;  1ZAD A;  5DU1 A;  2H5F A;  4QTI U;  1COE A;  1NTX A;  3NH7 A;  1UG4 A;  1CXN A;  1LJZ A;  2BTX A;  2PJY C;  2MJ4 A;  1DRS A;  1ES7 B;  1IKC A;  2BHI A;  2I9B E;  2MJY A;  2QJB C;  1G6M A;  5DZ5 A;  2L03 A;  1V6P A;  2H64 C;  3KFD I;  3PLC A;  2JVE A;  1CRE A;  1TFS A;  3VTS A;  2LCR A;  5IMT D;  4AEA A;  2H7Z B;  1LXH A;  1NTN A;  1TXA A;  1HOY A;  5DO6 A;  1NXB A;  2MJ0 A;  4UY2 C;  1IDG A;  3EVS C;  2HLR A;  2GOO B;  4OM4 A;  1KFH A;  2CDX A;  1NEA A;  3FEV A;  4OM5 A;  2UWR A;  2MUP A;  1KBA A;  1LSI A;  2OFS A;  3LAQ U;  4XJJ A;  1XT3 A;  1KU6 B;  1CDT A;  1MR6 A;  2H62 D;  2MHY A;  1CDS A;  1FFJ A;  1W6B A;  1CVO A;  2HLQ A;  3HH7 A;  3KFD E;  4LFT A;  2JQP A;  1H0J A;  1ERA A;  3BT1 U;  1IJC A;  2QJA C;  2UX2 A;  3U73 U;  1CXO A;  1KBT A;  6EBX A;  5IMY C;  1PLO A;  2N99 A;  1MAH F;  1CB9 A;  1B41 B;  3ERA A;  3EBX A;  3NEQ A;  1JE9 A;  2PJY B;  2VLW A;  1CDR A;  2H8U A;  1IK8 A;  2FD6 U;  1KXI A;  4KSN A;  4FAO C;  2LA1 A;  2QJ9 C;  1FRA A;  1S4Y A;  1HC9 A;  1IDL A;  2H64 B;  1JBD A;  1BXP A;  1CRF A;  4EY8 B;  1ABT A;  2CRT A;  1VB0 A;  1NYS A;  1M9Z A;  1CCQ A;  1NOR A;  2MUO A;  1F8U B;  1KL8 A;  4FAO E;  1KS6 A;  4IYE A;  1KBS A;  1NYU A;  1JGK A;  1FAS A;  1LXG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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