3EVSC

Crystal structure of the gdf-5:bmp receptor ib complex.
Total Genus 16
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
85
structure length
85
Chain Sequence
ILRCKCHHHCPEDSVNNICSTDGYCFTMIEEDDSGMPVVTSGCLGLEGSDFQCRDTPIPHQRRSIECCTERNECNKDLHPTLPPL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Cytokine/transferase receptor
molecule keywords Growth/differentiation factor 5
publication title Crystal structure analysis reveals a spring-loaded latch as molecular mechanism for GDF-5-type I receptor specificity.
pubmed doi rcsb
source organism Homo sapiens
total genus 16
structure length 85
sequence length 85
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2008-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01064 Activin_recp Activin types I and II receptor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 3evsC00
1CDRA 4DO8A 2NBTA 1IKCA 4QTIU 1CRFA 1JBDA 2MUOA 2PJYC 4UY2C 1IDIA 1COEA 1V6PA 1NTXA 3LAQU 2L03A 1KU6B 1CODA 1H0JA 1ABTA 3EBXA 1MR6A 4IYEA 2FD6U 2H62C 2JVEA 1BTEA 3U73U 2K3GA 1NYSA 1HAJA 1W6BA 2L5SA 3NDSA 3HH7A 1JGKA 1NORA 1TFSA 2PJYB 4ZQYA 1IDGA 1ZADA 4OM4A 3NH7A 1NTNA 3KFDI 1I02A 5DO6A 3KFDE 1CDTA 3BT2U 1TXAA 3ERAA 4FAOC 1NYUA 1KBTA 1IK8A 1F94A 1HOYA 2ABXA 1FSSB 1LJZA 1MAHF 2MJ4A 4EY8B 1M9ZA 1CREA 2HLRA 1JE9A 4OM5A 1FRAA 2H7ZB 2HLQA 1ERAA 1CVOA 1RL5A 4RUDA 1IDLA 4BDTB 1KL8A 1L4WA 1S4YA 2H62D 4LFTA 1B41B 2CTXA 3FEVA 4HQPF 1CDQA 2LCRA 2MFAA 2CDXA 5DU1A 1IJCA 1UG4A 2OFSA 1HC9A 1FASA 3QB4B 1REWC 1IDHA 1FF4A 1CTXA 2GOOC 1CXOA 1RGJA 5EBXA 2X8BB 2MHYA 3U74U 1XT3A 4P7UA 1NXBA 2J8BA 2GOOB 1CCQA 3PLCA 2H8UA 2QJAC 2BHIA 3EVSC 3NEQA 2VLWA 1F8UB 1HC9B 2ERAA 2CRSA 2MUPA 2I9BE 2N99A 1TXBA 1KFHA 1CB9A 1CDSA 2QJBC 1KXIA 1LXHA 2H5FA 5IMYC 1ERGA 2H64C 5IMTD 6EBXA 1KBAA 1KC4A 1HAAA 3VTSA 1LXGA 1QKDA 1DRSA 1ONJA 2BTXA 1PLOA 2MJ0A 4BIKB 2H64B 1YWHA 2H7ZA 2JQPA 2QC1A 1KBSA 1VB0A 1CHVS 5DZ5A 1QM7A 1LX5B 2UX2A 4FAOE 2CCXA 1NEAA 2UWRA 3BT1U 1G6MA 1IQ9A 2LA1A 1BXPA 1CXNA 2MJYA 1ES7B 1LSIA 1FFJA 1FSCA 4XJJA 1KTZB 1TGXA 1KS6A 2CRTA 4AEAA 1QKEA 2QJ9C
chains in the Genus database with same CATH superfamily
1CDRA 4DO8A 2NBTA 1IKCA 4QTIU 1CRFA 1JBDA 2MUOA 2PJYC 4UY2C 1IDIA 1COEA 1V6PA 1NTXA 3LAQU 2L03A 1KU6B 1CODA 1H0JA 1ABTA 3EBXA 1MR6A 4IYEA 2FD6U 2H62C 2JVEA 1BTEA 3U73U 2K3GA 1NYSA 1HAJA 1W6BA 2L5SA 3NDSA 3HH7A 1JGKA 1NORA 1TFSA 2PJYB 4ZQYA 1IDGA 1ZADA 4OM4A 3NH7A 1NTNA 3KFDI 1I02A 5DO6A 3KFDE 1CDTA 3BT2U 1TXAA 3ERAA 4FAOC 1NYUA 1KBTA 1IK8A 1F94A 1HOYA 2ABXA 1FSSB 1LJZA 1MAHF 2MJ4A 4EY8B 1M9ZA 1CREA 2HLRA 1JE9A 4OM5A 1FRAA 2H7ZB 2HLQA 4KSNA 1ERAA 1CVOA 1RL5A 4RUDA 1IDLA 4BDTB 1KL8A 1L4WA 1S4YA 2H62D 4LFTA 1B41B 2CTXA 3FEVA 4HQPF 1CDQA 2LCRA 2MFAA 2CDXA 5DU1A 1IJCA 1UG4A 2OFSA 1HC9A 1FASA 3QB4B 1REWC 1IDHA 1FF4A 1CTXA 2GOOC 1CXOA 1RGJA 5EBXA 2X8BB 2MHYA 3U74U 1XT3A 4P7UA 1NXBA 2J8BA 2GOOB 1CCQA 3PLCA 2H8UA 2QJAC 2BHIA 3EVSC 3NEQA 2VLWA 1F8UB 1HC9B 2ERAA 2CRSA 2MUPA 2I9BE 2N99A 1TXBA 1KFHA 1CB9A 1CDSA 2QJBC 1KXIA 1LXHA 2H5FA 5IMYC 1ERGA 2H64C 5IMTD 6EBXA 1KBAA 1KC4A 1HAAA 3VTSA 1LXGA 1QKDA 1DRSA 1ONJA 2BTXA 1PLOA 2MJ0A 4BIKB 2H64B 1YWHA 2H7ZA 2JQPA 2QC1A 1KBSA 1VB0A 1CHVS 5DZ5A 1QM7A 1LX5B 2UX2A 4FAOE 2CCXA 1NEAA 2UWRA 3BT1U 1G6MA 1IQ9A 2LA1A 1BXPA 1CXNA 2MJYA 1ES7B 1LSIA 1FFJA 1FSCA 4XJJA 1KTZB 1TGXA 1KS6A 2CRTA 4AEAA 1QKEA 2QJ9C
chains in the Genus database with same CATH topology
1CDRA 4DO8A 2NBTA 1IKCA 4QTIU 1CRFA 1JBDA 2MUOA 2PJYC 4UY2C 1IDIA 1COEA 1V6PA 1NTXA 3LAQU 2L03A 1KU6B 1CODA 1H0JA 1ABTA 3EBXA 1MR6A 4IYEA 2FD6U 2H62C 2JVEA 1BTEA 3U73U 2K3GA 1NYSA 1HAJA 1W6BA 2L5SA 3NDSA 3HH7A 1JGKA 1NORA 1TFSA 2PJYB 4ZQYA 1IDGA 1ZADA 4OM4A 3NH7A 1NTNA 3KFDI 1I02A 5DO6A 3KFDE 1CDTA 3BT2U 1TXAA 3ERAA 4FAOC 1NYUA 1KBTA 1IK8A 1F94A 1HOYA 2ABXA 1FSSB 1LJZA 1MAHF 2MJ4A 4EY8B 1M9ZA 1CREA 2HLRA 1JE9A 4OM5A 1FRAA 2H7ZB 2HLQA 4KSNA 1ERAA 1CVOA 1RL5A 4RUDA 1IDLA 4BDTB 1KL8A 1L4WA 1S4YA 2H62D 4LFTA 1B41B 2CTXA 3FEVA 4HQPF 1CDQA 2LCRA 2MFAA 2CDXA 5DU1A 1IJCA 1UG4A 2OFSA 1HC9A 1FASA 3QB4B 1REWC 1IDHA 1FF4A 1CTXA 2GOOC 1CXOA 1RGJA 5EBXA 2X8BB 2MHYA 3U74U 1XT3A 4P7UA 1NXBA 2J8BA 2GOOB 1CCQA 3PLCA 2H8UA 2QJAC 2BHIA 3EVSC 3NEQA 2VLWA 1F8UB 1HC9B 2ERAA 2CRSA 2MUPA 2I9BE 2N99A 1TXBA 1KFHA 1CB9A 1CDSA 2QJBC 1KXIA 1LXHA 2H5FA 5IMYC 1ERGA 2H64C 5IMTD 6EBXA 1KBAA 1KC4A 1HAAA 3VTSA 1LXGA 1QKDA 1DRSA 1ONJA 2BTXA 1PLOA 2MJ0A 4BIKB 2H64B 1YWHA 2H7ZA 2JQPA 2QC1A 1KBSA 1VB0A 1CHVS 5DZ5A 1QM7A 1LX5B 2UX2A 4FAOE 2CCXA 1NEAA 2UWRA 3BT1U 1G6MA 1IQ9A 2LA1A 1BXPA 1CXNA 2MJYA 1ES7B 1LSIA 1FFJA 1FSCA 4XJJA 1KTZB 1TGXA 1KS6A 2CRTA 4AEAA 1QKEA 2QJ9C
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CDR A;  4DO8 A;  2NBT A;  1IKC A;  4QTI U;  1CRF A;  1JBD A;  2MUO A;  2PJY C;  4UY2 C;  1IDI A;  1COE A;  1V6P A;  1NTX A;  3LAQ U;  2L03 A;  1KU6 B;  1COD A;  1H0J A;  1ABT A;  3EBX A;  1MR6 A;  4IYE A;  2FD6 U;  2H62 C;  2JVE A;  1BTE A;  3U73 U;  2K3G A;  1NYS A;  1HAJ A;  1W6B A;  2L5S A;  3NDS A;  3HH7 A;  1JGK A;  1NOR A;  1TFS A;  2PJY B;  4ZQY A;  1IDG A;  1ZAD A;  4OM4 A;  3NH7 A;  1NTN A;  3KFD I;  1I02 A;  5DO6 A;  3KFD E;  1CDT A;  3BT2 U;  1TXA A;  3ERA A;  4FAO C;  1NYU A;  1KBT A;  1IK8 A;  1F94 A;  1HOY A;  2ABX A;  1FSS B;  1LJZ A;  1MAH F;  2MJ4 A;  4EY8 B;  1M9Z A;  1CRE A;  2HLR A;  1JE9 A;  4OM5 A;  1FRA A;  2H7Z B;  2HLQ A;  1ERA A;  1CVO A;  1RL5 A;  4RUD A;  1IDL A;  4BDT B;  1KL8 A;  1L4W A;  1S4Y A;  2H62 D;  4LFT A;  1B41 B;  2CTX A;  3FEV A;  4HQP F;  1CDQ A;  2LCR A;  2MFA A;  2CDX A;  5DU1 A;  1IJC A;  1UG4 A;  2OFS A;  1HC9 A;  1FAS A;  3QB4 B;  1REW C;  1IDH A;  1FF4 A;  1CTX A;  2GOO C;  1CXO A;  1RGJ A;  5EBX A;  2X8B B;  2MHY A;  3U74 U;  1XT3 A;  4P7U A;  1NXB A;  2J8B A;  2GOO B;  1CCQ A;  3PLC A;  2H8U A;  2QJA C;  2BHI A;  3EVS C;  3NEQ A;  2VLW A;  1F8U B;  1HC9 B;  2ERA A;  2CRS A;  2MUP A;  2I9B E;  2N99 A;  1TXB A;  1KFH A;  1CB9 A;  1CDS A;  2QJB C;  1KXI A;  1LXH A;  2H5F A;  5IMY C;  1ERG A;  2H64 C;  5IMT D;  6EBX A;  1KBA A;  1KC4 A;  1HAA A;  3VTS A;  1LXG A;  1QKD A;  1DRS A;  1ONJ A;  2BTX A;  1PLO A;  2MJ0 A;  4BIK B;  2H64 B;  1YWH A;  2H7Z A;  2JQP A;  2QC1 A;  1KBS A;  1VB0 A;  1CHV S;  5DZ5 A;  1QM7 A;  1LX5 B;  2UX2 A;  4FAO E;  2CCX A;  1NEA A;  2UWR A;  3BT1 U;  1G6M A;  1IQ9 A;  2LA1 A;  1BXP A;  1CXN A;  2MJY A;  1ES7 B;  1LSI A;  1FFJ A;  1FSC A;  4XJJ A;  1KTZ B;  1TGX A;  1KS6 A;  2CRT A;  4AEA A;  1QKE A;  2QJ9 C; 
#chains in the Genus database with same CATH topology
 1CDR A;  4DO8 A;  2NBT A;  1IKC A;  4QTI U;  1CRF A;  1JBD A;  2MUO A;  2PJY C;  4UY2 C;  1IDI A;  1COE A;  1V6P A;  1NTX A;  3LAQ U;  2L03 A;  1KU6 B;  1COD A;  1H0J A;  1ABT A;  3EBX A;  1MR6 A;  4IYE A;  2FD6 U;  2H62 C;  2JVE A;  1BTE A;  3U73 U;  2K3G A;  1NYS A;  1HAJ A;  1W6B A;  2L5S A;  3NDS A;  3HH7 A;  1JGK A;  1NOR A;  1TFS A;  2PJY B;  4ZQY A;  1IDG A;  1ZAD A;  4OM4 A;  3NH7 A;  1NTN A;  3KFD I;  1I02 A;  5DO6 A;  3KFD E;  1CDT A;  3BT2 U;  1TXA A;  3ERA A;  4FAO C;  1NYU A;  1KBT A;  1IK8 A;  1F94 A;  1HOY A;  2ABX A;  1FSS B;  1LJZ A;  1MAH F;  2MJ4 A;  4EY8 B;  1M9Z A;  1CRE A;  2HLR A;  1JE9 A;  4OM5 A;  1FRA A;  2H7Z B;  2HLQ A;  4KSN A;  1ERA A;  1CVO A;  1RL5 A;  4RUD A;  1IDL A;  4BDT B;  1KL8 A;  1L4W A;  1S4Y A;  2H62 D;  4LFT A;  1B41 B;  2CTX A;  3FEV A;  4HQP F;  1CDQ A;  2LCR A;  2MFA A;  2CDX A;  5DU1 A;  1IJC A;  1UG4 A;  2OFS A;  1HC9 A;  1FAS A;  3QB4 B;  1REW C;  1IDH A;  1FF4 A;  1CTX A;  2GOO C;  1CXO A;  1RGJ A;  5EBX A;  2X8B B;  2MHY A;  3U74 U;  1XT3 A;  4P7U A;  1NXB A;  2J8B A;  2GOO B;  1CCQ A;  3PLC A;  2H8U A;  2QJA C;  2BHI A;  3EVS C;  3NEQ A;  2VLW A;  1F8U B;  1HC9 B;  2ERA A;  2CRS A;  2MUP A;  2I9B E;  2N99 A;  1TXB A;  1KFH A;  1CB9 A;  1CDS A;  2QJB C;  1KXI A;  1LXH A;  2H5F A;  5IMY C;  1ERG A;  2H64 C;  5IMT D;  6EBX A;  1KBA A;  1KC4 A;  1HAA A;  3VTS A;  1LXG A;  1QKD A;  1DRS A;  1ONJ A;  2BTX A;  1PLO A;  2MJ0 A;  4BIK B;  2H64 B;  1YWH A;  2H7Z A;  2JQP A;  2QC1 A;  1KBS A;  1VB0 A;  1CHV S;  5DZ5 A;  1QM7 A;  1LX5 B;  2UX2 A;  4FAO E;  2CCX A;  1NEA A;  2UWR A;  3BT1 U;  1G6M A;  1IQ9 A;  2LA1 A;  1BXP A;  1CXN A;  2MJY A;  1ES7 B;  1LSI A;  1FFJ A;  1FSC A;  4XJJ A;  1KTZ B;  1TGX A;  1KS6 A;  2CRT A;  4AEA A;  1QKE A;  2QJ9 C; 
#chains in the Genus database with same CATH homology
 1CDR A;  4DO8 A;  2NBT A;  1IKC A;  4QTI U;  1CRF A;  1JBD A;  2MUO A;  2PJY C;  4UY2 C;  1IDI A;  1COE A;  1V6P A;  1NTX A;  3LAQ U;  2L03 A;  1KU6 B;  1COD A;  1H0J A;  1ABT A;  3EBX A;  1MR6 A;  4IYE A;  2FD6 U;  2H62 C;  2JVE A;  1BTE A;  3U73 U;  2K3G A;  1NYS A;  1HAJ A;  1W6B A;  2L5S A;  3NDS A;  3HH7 A;  1JGK A;  1NOR A;  1TFS A;  2PJY B;  4ZQY A;  1IDG A;  1ZAD A;  4OM4 A;  3NH7 A;  1NTN A;  3KFD I;  1I02 A;  5DO6 A;  3KFD E;  1CDT A;  3BT2 U;  1TXA A;  3ERA A;  4FAO C;  1NYU A;  1KBT A;  1IK8 A;  1F94 A;  1HOY A;  2ABX A;  1FSS B;  1LJZ A;  1MAH F;  2MJ4 A;  4EY8 B;  1M9Z A;  1CRE A;  2HLR A;  1JE9 A;  4OM5 A;  1FRA A;  2H7Z B;  2HLQ A;  4KSN A;  1ERA A;  1CVO A;  1RL5 A;  4RUD A;  1IDL A;  4BDT B;  1KL8 A;  1L4W A;  1S4Y A;  2H62 D;  4LFT A;  1B41 B;  2CTX A;  3FEV A;  4HQP F;  1CDQ A;  2LCR A;  2MFA A;  2CDX A;  5DU1 A;  1IJC A;  1UG4 A;  2OFS A;  1HC9 A;  1FAS A;  3QB4 B;  1REW C;  1IDH A;  1FF4 A;  1CTX A;  2GOO C;  1CXO A;  1RGJ A;  5EBX A;  2X8B B;  2MHY A;  3U74 U;  1XT3 A;  4P7U A;  1NXB A;  2J8B A;  2GOO B;  1CCQ A;  3PLC A;  2H8U A;  2QJA C;  2BHI A;  3EVS C;  3NEQ A;  2VLW A;  1F8U B;  1HC9 B;  2ERA A;  2CRS A;  2MUP A;  2I9B E;  2N99 A;  1TXB A;  1KFH A;  1CB9 A;  1CDS A;  2QJB C;  1KXI A;  1LXH A;  2H5F A;  5IMY C;  1ERG A;  2H64 C;  5IMT D;  6EBX A;  1KBA A;  1KC4 A;  1HAA A;  3VTS A;  1LXG A;  1QKD A;  1DRS A;  1ONJ A;  2BTX A;  1PLO A;  2MJ0 A;  4BIK B;  2H64 B;  1YWH A;  2H7Z A;  2JQP A;  2QC1 A;  1KBS A;  1VB0 A;  1CHV S;  5DZ5 A;  1QM7 A;  1LX5 B;  2UX2 A;  4FAO E;  2CCX A;  1NEA A;  2UWR A;  3BT1 U;  1G6M A;  1IQ9 A;  2LA1 A;  1BXP A;  1CXN A;  2MJY A;  1ES7 B;  1LSI A;  1FFJ A;  1FSC A;  4XJJ A;  1KTZ B;  1TGX A;  1KS6 A;  2CRT A;  4AEA A;  1QKE A;  2QJ9 C; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...