2MFAA

Mambalgin-2
Total Genus 10
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
57
structure length
57
Chain Sequence
LKCFQHGKVVTCHRDMKFCYHNTGMPFRNLKLILQGCSSSCSETENNKCCSTDRCNK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
publication title Chemical synthesis, 3D structure, and ASIC binding site of the toxin mambalgin-2.
pubmed doi rcsb
molecule keywords Mambalgin-2
total genus 10
structure length 57
sequence length 57
ec nomenclature
pdb deposition date 2013-10-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2mfaA00
1VB0A 3BT2U 1CDRA 1CCQA 2CTXA 3ERAA 2JQPA 5DU1A 2QJBC 4UY2C 1IDHA 1LJZA 1F94A 3BT1U 1MR6A 1ERGA 1KBSA 1LSIA 2QC1A 1ZADA 2MFAA 1IDIA 1CTXA 2I9BE 1CB9A 1PLOA 1QKDA 1QKEA 3LAQU 3PLCA 4EY8B 1FF4A 2H62C 1RL5A 5IMTD 2MUOA 3KFDI 2H5FA 4QTIU 1IDGA 4BIKB 1I02A 2MUPA 1H0JA 1V6PA 1CODA 1NXBA 4XJJA 2LA1A 2GOOC 4FAOC 2H7ZA 2CCXA 2H8UA 1ERAA 3NH7A 2QJ9C 2ERAA 4HQPF 1CDSA 1CRFA 1BTEA 1L4WA 1REWC 1IDLA 5DZ5A 2L03A 1FRAA 2HLQA 6EBXA 1YWHA 2MJYA 4P7UA 1KC4A 1HC9A 1FSSB 2CRSA 1IJCA 2L5SA 1IQ9A 3QB4B 1LXHA 1LXGA 1KU6B 2H62D 1TXBA 1KFHA 4BDTB 2MJ0A 2K3GA 3HH7A 1NYSA 1ONJA 1TFSA 2JVEA 4AEAA 1COEA 1KTZB 1NYUA 4OM5A 4ZQYA 1KS6A 1CHVS 2NBTA 1FSCA 3U73U 1CDQA 5IMYC 1JE9A 1G6MA 1TGXA 1S4YA 1RGJA 2UX2A 1FASA 2VLWA 1NEAA 1ES7B 2H64B 3NDSA 2PJYB 1HAAA 2BHIA 1NTXA 2X8BB 2H7ZB 1IK8A 2ABXA 1JGKA 4RUDA 4DO8A 1KBTA 1ABTA 4LFTA 1NORA 2HLRA 2MJ4A 3VTSA 1CVOA 2CDXA 3U74U 1CDTA 1KXIA 2N99A 2QJAC 2UWRA 1QM7A 1W6BA 2FD6U 2H64C 5EBXA 1M9ZA 2PJYC 1BXPA 1UG4A 1HC9B 1CXNA 2LCRA 3NEQA 1DRSA 1CREA 2BTXA 2J8BA 4IYEA 1B41B 3FEVA 2CRTA 1HOYA 2MHYA 3KFDE 1F8UB 1KBAA 1CXOA 1KL8A 2GOOB 1FFJA 1LX5B 4OM4A 2OFSA 3EBXA 1TXAA 1MAHF 3EVSC 1XT3A 4FAOE 1NTNA 1HAJA 5DO6A 1JBDA 1IKCA
chains in the Genus database with same CATH superfamily
1VB0A 3BT2U 1CDRA 1CCQA 2CTXA 3ERAA 2JQPA 5DU1A 2QJBC 4UY2C 1IDHA 1LJZA 1F94A 3BT1U 1MR6A 1ERGA 1KBSA 1LSIA 2QC1A 1ZADA 2MFAA 1IDIA 1CTXA 2I9BE 1CB9A 1PLOA 1QKDA 1QKEA 3LAQU 3PLCA 4EY8B 1FF4A 2H62C 1RL5A 5IMTD 2MUOA 3KFDI 2H5FA 4QTIU 1IDGA 4BIKB 1I02A 2MUPA 1H0JA 1V6PA 1CODA 1NXBA 4XJJA 2LA1A 2GOOC 4FAOC 2H7ZA 2CCXA 2H8UA 1ERAA 3NH7A 2QJ9C 2ERAA 4HQPF 1CDSA 1CRFA 1BTEA 1L4WA 1REWC 1IDLA 5DZ5A 2L03A 1FRAA 2HLQA 6EBXA 1YWHA 2MJYA 4P7UA 1KC4A 1HC9A 1FSSB 2CRSA 1IJCA 2L5SA 1IQ9A 3QB4B 1LXHA 1LXGA 1KU6B 2H62D 1TXBA 1KFHA 4BDTB 2MJ0A 2K3GA 3HH7A 1NYSA 1ONJA 1TFSA 2JVEA 4AEAA 1COEA 1KTZB 1NYUA 4OM5A 4ZQYA 1KS6A 4KSNA 1CHVS 2NBTA 1FSCA 3U73U 1CDQA 5IMYC 1JE9A 1G6MA 1TGXA 1S4YA 1RGJA 2UX2A 1FASA 2VLWA 1NEAA 1ES7B 2H64B 3NDSA 2PJYB 1HAAA 2BHIA 1NTXA 2X8BB 2H7ZB 1IK8A 2ABXA 1JGKA 4RUDA 4DO8A 1KBTA 1ABTA 4LFTA 1NORA 2HLRA 2MJ4A 3VTSA 1CVOA 2CDXA 3U74U 1CDTA 1KXIA 2N99A 2QJAC 2UWRA 1QM7A 1W6BA 2FD6U 2H64C 5EBXA 1M9ZA 2PJYC 1BXPA 1UG4A 1HC9B 1CXNA 2LCRA 3NEQA 1DRSA 1CREA 2BTXA 2J8BA 4IYEA 1B41B 3FEVA 2CRTA 1HOYA 2MHYA 3KFDE 1F8UB 1KBAA 1CXOA 1KL8A 2GOOB 1FFJA 1LX5B 4OM4A 2OFSA 3EBXA 1TXAA 1MAHF 3EVSC 1XT3A 4FAOE 1NTNA 1HAJA 5DO6A 1JBDA 1IKCA
chains in the Genus database with same CATH topology
1VB0A 3BT2U 1CDRA 1CCQA 2CTXA 3ERAA 2JQPA 5DU1A 2QJBC 4UY2C 1IDHA 1LJZA 1F94A 3BT1U 1MR6A 1ERGA 1KBSA 1LSIA 2QC1A 1ZADA 2MFAA 1IDIA 1CTXA 2I9BE 1CB9A 1PLOA 1QKDA 1QKEA 3LAQU 3PLCA 4EY8B 1FF4A 2H62C 1RL5A 5IMTD 2MUOA 3KFDI 2H5FA 4QTIU 1IDGA 4BIKB 1I02A 2MUPA 1H0JA 1V6PA 1CODA 1NXBA 4XJJA 2LA1A 2GOOC 4FAOC 2H7ZA 2CCXA 2H8UA 1ERAA 3NH7A 2QJ9C 2ERAA 4HQPF 1CDSA 1CRFA 1BTEA 1L4WA 1REWC 1IDLA 5DZ5A 2L03A 1FRAA 2HLQA 6EBXA 1YWHA 2MJYA 4P7UA 1KC4A 1HC9A 1FSSB 2CRSA 1IJCA 2L5SA 1IQ9A 3QB4B 1LXHA 1LXGA 1KU6B 2H62D 1TXBA 1KFHA 4BDTB 2MJ0A 2K3GA 3HH7A 1NYSA 1ONJA 1TFSA 2JVEA 4AEAA 1COEA 1KTZB 1NYUA 4OM5A 4ZQYA 1KS6A 4KSNA 1CHVS 2NBTA 1FSCA 3U73U 1CDQA 5IMYC 1JE9A 1G6MA 1TGXA 1S4YA 1RGJA 2UX2A 1FASA 2VLWA 1NEAA 1ES7B 2H64B 3NDSA 2PJYB 1HAAA 2BHIA 1NTXA 2X8BB 2H7ZB 1IK8A 2ABXA 1JGKA 4RUDA 4DO8A 1KBTA 1ABTA 4LFTA 1NORA 2HLRA 2MJ4A 3VTSA 1CVOA 2CDXA 3U74U 1CDTA 1KXIA 2N99A 2QJAC 2UWRA 1QM7A 1W6BA 2FD6U 2H64C 5EBXA 1M9ZA 2PJYC 1BXPA 1UG4A 1HC9B 1CXNA 2LCRA 3NEQA 1DRSA 1CREA 2BTXA 2J8BA 4IYEA 1B41B 3FEVA 2CRTA 1HOYA 2MHYA 3KFDE 1F8UB 1KBAA 1CXOA 1KL8A 2GOOB 1FFJA 1LX5B 4OM4A 2OFSA 3EBXA 1TXAA 1MAHF 3EVSC 1XT3A 4FAOE 1NTNA 1HAJA 5DO6A 1JBDA 1IKCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1VB0 A;  3BT2 U;  1CDR A;  1CCQ A;  2CTX A;  3ERA A;  2JQP A;  5DU1 A;  2QJB C;  4UY2 C;  1IDH A;  1LJZ A;  1F94 A;  3BT1 U;  1MR6 A;  1ERG A;  1KBS A;  1LSI A;  2QC1 A;  1ZAD A;  2MFA A;  1IDI A;  1CTX A;  2I9B E;  1CB9 A;  1PLO A;  1QKD A;  1QKE A;  3LAQ U;  3PLC A;  4EY8 B;  1FF4 A;  2H62 C;  1RL5 A;  5IMT D;  2MUO A;  3KFD I;  2H5F A;  4QTI U;  1IDG A;  4BIK B;  1I02 A;  2MUP A;  1H0J A;  1V6P A;  1COD A;  1NXB A;  4XJJ A;  2LA1 A;  2GOO C;  4FAO C;  2H7Z A;  2CCX A;  2H8U A;  1ERA A;  3NH7 A;  2QJ9 C;  2ERA A;  4HQP F;  1CDS A;  1CRF A;  1BTE A;  1L4W A;  1REW C;  1IDL A;  5DZ5 A;  2L03 A;  1FRA A;  2HLQ A;  6EBX A;  1YWH A;  2MJY A;  4P7U A;  1KC4 A;  1HC9 A;  1FSS B;  2CRS A;  1IJC A;  2L5S A;  1IQ9 A;  3QB4 B;  1LXH A;  1LXG A;  1KU6 B;  2H62 D;  1TXB A;  1KFH A;  4BDT B;  2MJ0 A;  2K3G A;  3HH7 A;  1NYS A;  1ONJ A;  1TFS A;  2JVE A;  4AEA A;  1COE A;  1KTZ B;  1NYU A;  4OM5 A;  4ZQY A;  1KS6 A;  1CHV S;  2NBT A;  1FSC A;  3U73 U;  1CDQ A;  5IMY C;  1JE9 A;  1G6M A;  1TGX A;  1S4Y A;  1RGJ A;  2UX2 A;  1FAS A;  2VLW A;  1NEA A;  1ES7 B;  2H64 B;  3NDS A;  2PJY B;  1HAA A;  2BHI A;  1NTX A;  2X8B B;  2H7Z B;  1IK8 A;  2ABX A;  1JGK A;  4RUD A;  4DO8 A;  1KBT A;  1ABT A;  4LFT A;  1NOR A;  2HLR A;  2MJ4 A;  3VTS A;  1CVO A;  2CDX A;  3U74 U;  1CDT A;  1KXI A;  2N99 A;  2QJA C;  2UWR A;  1QM7 A;  1W6B A;  2FD6 U;  2H64 C;  5EBX A;  1M9Z A;  2PJY C;  1BXP A;  1UG4 A;  1HC9 B;  1CXN A;  2LCR A;  3NEQ A;  1DRS A;  1CRE A;  2BTX A;  2J8B A;  4IYE A;  1B41 B;  3FEV A;  2CRT A;  1HOY A;  2MHY A;  3KFD E;  1F8U B;  1KBA A;  1CXO A;  1KL8 A;  2GOO B;  1FFJ A;  1LX5 B;  4OM4 A;  2OFS A;  3EBX A;  1TXA A;  1MAH F;  3EVS C;  1XT3 A;  4FAO E;  1NTN A;  1HAJ A;  5DO6 A;  1JBD A;  1IKC A; 
#chains in the Genus database with same CATH topology
 1VB0 A;  3BT2 U;  1CDR A;  1CCQ A;  2CTX A;  3ERA A;  2JQP A;  5DU1 A;  2QJB C;  4UY2 C;  1IDH A;  1LJZ A;  1F94 A;  3BT1 U;  1MR6 A;  1ERG A;  1KBS A;  1LSI A;  2QC1 A;  1ZAD A;  2MFA A;  1IDI A;  1CTX A;  2I9B E;  1CB9 A;  1PLO A;  1QKD A;  1QKE A;  3LAQ U;  3PLC A;  4EY8 B;  1FF4 A;  2H62 C;  1RL5 A;  5IMT D;  2MUO A;  3KFD I;  2H5F A;  4QTI U;  1IDG A;  4BIK B;  1I02 A;  2MUP A;  1H0J A;  1V6P A;  1COD A;  1NXB A;  4XJJ A;  2LA1 A;  2GOO C;  4FAO C;  2H7Z A;  2CCX A;  2H8U A;  1ERA A;  3NH7 A;  2QJ9 C;  2ERA A;  4HQP F;  1CDS A;  1CRF A;  1BTE A;  1L4W A;  1REW C;  1IDL A;  5DZ5 A;  2L03 A;  1FRA A;  2HLQ A;  6EBX A;  1YWH A;  2MJY A;  4P7U A;  1KC4 A;  1HC9 A;  1FSS B;  2CRS A;  1IJC A;  2L5S A;  1IQ9 A;  3QB4 B;  1LXH A;  1LXG A;  1KU6 B;  2H62 D;  1TXB A;  1KFH A;  4BDT B;  2MJ0 A;  2K3G A;  3HH7 A;  1NYS A;  1ONJ A;  1TFS A;  2JVE A;  4AEA A;  1COE A;  1KTZ B;  1NYU A;  4OM5 A;  4ZQY A;  1KS6 A;  4KSN A;  1CHV S;  2NBT A;  1FSC A;  3U73 U;  1CDQ A;  5IMY C;  1JE9 A;  1G6M A;  1TGX A;  1S4Y A;  1RGJ A;  2UX2 A;  1FAS A;  2VLW A;  1NEA A;  1ES7 B;  2H64 B;  3NDS A;  2PJY B;  1HAA A;  2BHI A;  1NTX A;  2X8B B;  2H7Z B;  1IK8 A;  2ABX A;  1JGK A;  4RUD A;  4DO8 A;  1KBT A;  1ABT A;  4LFT A;  1NOR A;  2HLR A;  2MJ4 A;  3VTS A;  1CVO A;  2CDX A;  3U74 U;  1CDT A;  1KXI A;  2N99 A;  2QJA C;  2UWR A;  1QM7 A;  1W6B A;  2FD6 U;  2H64 C;  5EBX A;  1M9Z A;  2PJY C;  1BXP A;  1UG4 A;  1HC9 B;  1CXN A;  2LCR A;  3NEQ A;  1DRS A;  1CRE A;  2BTX A;  2J8B A;  4IYE A;  1B41 B;  3FEV A;  2CRT A;  1HOY A;  2MHY A;  3KFD E;  1F8U B;  1KBA A;  1CXO A;  1KL8 A;  2GOO B;  1FFJ A;  1LX5 B;  4OM4 A;  2OFS A;  3EBX A;  1TXA A;  1MAH F;  3EVS C;  1XT3 A;  4FAO E;  1NTN A;  1HAJ A;  5DO6 A;  1JBD A;  1IKC A; 
#chains in the Genus database with same CATH homology
 1VB0 A;  3BT2 U;  1CDR A;  1CCQ A;  2CTX A;  3ERA A;  2JQP A;  5DU1 A;  2QJB C;  4UY2 C;  1IDH A;  1LJZ A;  1F94 A;  3BT1 U;  1MR6 A;  1ERG A;  1KBS A;  1LSI A;  2QC1 A;  1ZAD A;  2MFA A;  1IDI A;  1CTX A;  2I9B E;  1CB9 A;  1PLO A;  1QKD A;  1QKE A;  3LAQ U;  3PLC A;  4EY8 B;  1FF4 A;  2H62 C;  1RL5 A;  5IMT D;  2MUO A;  3KFD I;  2H5F A;  4QTI U;  1IDG A;  4BIK B;  1I02 A;  2MUP A;  1H0J A;  1V6P A;  1COD A;  1NXB A;  4XJJ A;  2LA1 A;  2GOO C;  4FAO C;  2H7Z A;  2CCX A;  2H8U A;  1ERA A;  3NH7 A;  2QJ9 C;  2ERA A;  4HQP F;  1CDS A;  1CRF A;  1BTE A;  1L4W A;  1REW C;  1IDL A;  5DZ5 A;  2L03 A;  1FRA A;  2HLQ A;  6EBX A;  1YWH A;  2MJY A;  4P7U A;  1KC4 A;  1HC9 A;  1FSS B;  2CRS A;  1IJC A;  2L5S A;  1IQ9 A;  3QB4 B;  1LXH A;  1LXG A;  1KU6 B;  2H62 D;  1TXB A;  1KFH A;  4BDT B;  2MJ0 A;  2K3G A;  3HH7 A;  1NYS A;  1ONJ A;  1TFS A;  2JVE A;  4AEA A;  1COE A;  1KTZ B;  1NYU A;  4OM5 A;  4ZQY A;  1KS6 A;  4KSN A;  1CHV S;  2NBT A;  1FSC A;  3U73 U;  1CDQ A;  5IMY C;  1JE9 A;  1G6M A;  1TGX A;  1S4Y A;  1RGJ A;  2UX2 A;  1FAS A;  2VLW A;  1NEA A;  1ES7 B;  2H64 B;  3NDS A;  2PJY B;  1HAA A;  2BHI A;  1NTX A;  2X8B B;  2H7Z B;  1IK8 A;  2ABX A;  1JGK A;  4RUD A;  4DO8 A;  1KBT A;  1ABT A;  4LFT A;  1NOR A;  2HLR A;  2MJ4 A;  3VTS A;  1CVO A;  2CDX A;  3U74 U;  1CDT A;  1KXI A;  2N99 A;  2QJA C;  2UWR A;  1QM7 A;  1W6B A;  2FD6 U;  2H64 C;  5EBX A;  1M9Z A;  2PJY C;  1BXP A;  1UG4 A;  1HC9 B;  1CXN A;  2LCR A;  3NEQ A;  1DRS A;  1CRE A;  2BTX A;  2J8B A;  4IYE A;  1B41 B;  3FEV A;  2CRT A;  1HOY A;  2MHY A;  3KFD E;  1F8U B;  1KBA A;  1CXO A;  1KL8 A;  2GOO B;  1FFJ A;  1LX5 B;  4OM4 A;  2OFS A;  3EBX A;  1TXA A;  1MAH F;  3EVS C;  1XT3 A;  4FAO E;  1NTN A;  1HAJ A;  5DO6 A;  1JBD A;  1IKC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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