2PJYB

Structural basis for cooperative assembly of the tgf-beta signaling complex
Total Genus 20
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
20
sequence length
108
structure length
108
Chain Sequence
AGAVKFPQLCKFCDVRFSTCDNQKSCMSNCSITSICEKPQEVCVAVWRKNDENITLETVCHDPKLPYHDFILEDAASPKCIMKEKKKPGETFFMCSCSSDECNDNIIF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cytokine/cytokine receptor
source organism Homo sapiens
publication title Cooperative assembly of TGF-beta superfamily signaling complexes is mediated by two disparate mechanisms and distinct modes of receptor binding.
pubmed doi rcsb
molecule keywords Transforming growth factor beta-3
total genus 20
structure length 108
sequence length 108
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2007-04-16
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2pjyB00
2CCXA 1RGJA 2N99A 2OFSA 2PJYB 1FFJA 1I02A 4UY2C 1CDQA 1MAHF 1NYUA 4RUDA 2MUPA 1PLOA 1H0JA 1QKEA 3NDSA 4FAOC 1LJZA 1CXOA 1BTEA 1FRAA 1KBTA 2K3GA 1TFSA 2H7ZB 2H8UA 1BXPA 4IYEA 2X8BB 2H64B 5DU1A 4AEAA 1NORA 1JGKA 2L03A 3VTSA 2CRSA 2MHYA 6EBXA 1HC9B 1CDRA 2ABXA 4QTIU 1COEA 2GOOB 2H62D 1LX5B 1NEAA 1ERAA 3QB4B 1ZADA 1RL5A 2UX2A 1UG4A 3LAQU 1LXGA 1L4WA 1LXHA 2LCRA 1W6BA 1CREA 1QKDA 2L5SA 4OM4A 1XT3A 1KBAA 1KC4A 1F94A 1MR6A 2MJYA 3U74U 1M9ZA 1TGXA 1HOYA 1CCQA 1S4YA 3KFDE 1KS6A 1FSSB 5IMTD 1KFHA 1NYSA 2H5FA 4ZQYA 2H7ZA 1NXBA 2UWRA 4HQPF 1CDSA 3HH7A 1CVOA 1KL8A 4DO8A 4FAOE 1DRSA 2I9BE 1IDLA 1HC9A 3ERAA 2FD6U 2JVEA 3FEVA 5DZ5A 2MJ0A 3EBXA 3BT1U 1HAJA 2QC1A 2JQPA 2CRTA 2QJBC 1VB0A 1NTXA 1TXBA 1IDGA 3KFDI 1CODA 2CDXA 1B41B 5EBXA 4BDTB 2BTXA 1FASA 1JBDA 1FF4A 2PJYC 2QJ9C 4LFTA 1TXAA 1NTNA 2VLWA 3NH7A 1IJCA 1IQ9A 1IK8A 5DO6A 2QJAC 1V6PA 1IDHA 1CTXA 1LSIA 2ERAA 2NBTA 2H64C 1JE9A 1REWC 1ONJA 1CHVS 1ERGA 3BT2U 1CXNA 1HAAA 1KTZB 2CTXA 1CRFA 2MJ4A 2GOOC 3U73U 1CB9A 4BIKB 4P7UA 4XJJA 1IKCA 2MFAA 2BHIA 3PLCA 1FSCA 2HLRA 2J8BA 2LA1A 2H62C 2MUOA 1G6MA 1YWHA 4OM5A 1QM7A 1IDIA 1KBSA 1KU6B 5IMYC 4EY8B 1KXIA 1ES7B 1F8UB 2HLQA 1ABTA 1CDTA 3EVSC 3NEQA
chains in the Genus database with same CATH superfamily
2CCXA 1RGJA 2N99A 2OFSA 2PJYB 4KSNA 1FFJA 1I02A 4UY2C 1CDQA 1MAHF 1NYUA 4RUDA 2MUPA 1PLOA 1H0JA 1QKEA 3NDSA 4FAOC 1LJZA 1CXOA 1BTEA 1FRAA 1KBTA 2K3GA 1TFSA 2H7ZB 2H8UA 1BXPA 4IYEA 2X8BB 2H64B 5DU1A 4AEAA 1NORA 1JGKA 2L03A 3VTSA 2CRSA 2MHYA 6EBXA 1HC9B 1CDRA 2ABXA 4QTIU 1COEA 2GOOB 2H62D 1LX5B 1NEAA 1ERAA 3QB4B 1ZADA 1RL5A 2UX2A 1UG4A 3LAQU 1LXGA 1L4WA 1LXHA 2LCRA 1W6BA 1CREA 1QKDA 2L5SA 4OM4A 1XT3A 1KBAA 1KC4A 1F94A 1MR6A 2MJYA 3U74U 1M9ZA 1TGXA 1HOYA 1CCQA 1S4YA 3KFDE 1KS6A 1FSSB 5IMTD 1KFHA 1NYSA 2H5FA 4ZQYA 2H7ZA 1NXBA 2UWRA 4HQPF 1CDSA 3HH7A 1CVOA 1KL8A 4DO8A 4FAOE 1DRSA 2I9BE 1IDLA 1HC9A 3ERAA 2FD6U 2JVEA 3FEVA 5DZ5A 2MJ0A 3EBXA 3BT1U 1HAJA 2QC1A 2JQPA 2CRTA 2QJBC 1VB0A 1NTXA 1TXBA 1IDGA 3KFDI 1CODA 2CDXA 1B41B 5EBXA 4BDTB 2BTXA 1FASA 1JBDA 1FF4A 2PJYC 2QJ9C 4LFTA 1TXAA 1NTNA 2VLWA 3NH7A 1IJCA 1IQ9A 1IK8A 5DO6A 2QJAC 1V6PA 1IDHA 1CTXA 1LSIA 2ERAA 2NBTA 2H64C 1JE9A 1REWC 1ONJA 1CHVS 1ERGA 3BT2U 1CXNA 1HAAA 1KTZB 2CTXA 1CRFA 2MJ4A 2GOOC 3U73U 1CB9A 4BIKB 4P7UA 4XJJA 1IKCA 2MFAA 2BHIA 3PLCA 1FSCA 2HLRA 2J8BA 2LA1A 2H62C 2MUOA 1G6MA 1YWHA 4OM5A 1QM7A 1IDIA 1KBSA 1KU6B 5IMYC 4EY8B 1KXIA 1ES7B 1F8UB 2HLQA 1ABTA 1CDTA 3EVSC 3NEQA
chains in the Genus database with same CATH topology
2CCXA 1RGJA 2N99A 2OFSA 2PJYB 4KSNA 1FFJA 1I02A 4UY2C 1CDQA 1MAHF 1NYUA 4RUDA 2MUPA 1PLOA 1H0JA 1QKEA 3NDSA 4FAOC 1LJZA 1CXOA 1BTEA 1FRAA 1KBTA 2K3GA 1TFSA 2H7ZB 2H8UA 1BXPA 4IYEA 2X8BB 2H64B 5DU1A 4AEAA 1NORA 1JGKA 2L03A 3VTSA 2CRSA 2MHYA 6EBXA 1HC9B 1CDRA 2ABXA 4QTIU 1COEA 2GOOB 2H62D 1LX5B 1NEAA 1ERAA 3QB4B 1ZADA 1RL5A 2UX2A 1UG4A 3LAQU 1LXGA 1L4WA 1LXHA 2LCRA 1W6BA 1CREA 1QKDA 2L5SA 4OM4A 1XT3A 1KBAA 1KC4A 1F94A 1MR6A 2MJYA 3U74U 1M9ZA 1TGXA 1HOYA 1CCQA 1S4YA 3KFDE 1KS6A 1FSSB 5IMTD 1KFHA 1NYSA 2H5FA 4ZQYA 2H7ZA 1NXBA 2UWRA 4HQPF 1CDSA 3HH7A 1CVOA 1KL8A 4DO8A 4FAOE 1DRSA 2I9BE 1IDLA 1HC9A 3ERAA 2FD6U 2JVEA 3FEVA 5DZ5A 2MJ0A 3EBXA 3BT1U 1HAJA 2QC1A 2JQPA 2CRTA 2QJBC 1VB0A 1NTXA 1TXBA 1IDGA 3KFDI 1CODA 2CDXA 1B41B 5EBXA 4BDTB 2BTXA 1FASA 1JBDA 1FF4A 2PJYC 2QJ9C 4LFTA 1TXAA 1NTNA 2VLWA 3NH7A 1IJCA 1IQ9A 1IK8A 5DO6A 2QJAC 1V6PA 1IDHA 1CTXA 1LSIA 2ERAA 2NBTA 2H64C 1JE9A 1REWC 1ONJA 1CHVS 1ERGA 3BT2U 1CXNA 1HAAA 1KTZB 2CTXA 1CRFA 2MJ4A 2GOOC 3U73U 1CB9A 4BIKB 4P7UA 4XJJA 1IKCA 2MFAA 2BHIA 3PLCA 1FSCA 2HLRA 2J8BA 2LA1A 2H62C 2MUOA 1G6MA 1YWHA 4OM5A 1QM7A 1IDIA 1KBSA 1KU6B 5IMYC 4EY8B 1KXIA 1ES7B 1F8UB 2HLQA 1ABTA 1CDTA 3EVSC 3NEQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2CCX A;  1RGJ A;  2N99 A;  2OFS A;  2PJY B;  1FFJ A;  1I02 A;  4UY2 C;  1CDQ A;  1MAH F;  1NYU A;  4RUD A;  2MUP A;  1PLO A;  1H0J A;  1QKE A;  3NDS A;  4FAO C;  1LJZ A;  1CXO A;  1BTE A;  1FRA A;  1KBT A;  2K3G A;  1TFS A;  2H7Z B;  2H8U A;  1BXP A;  4IYE A;  2X8B B;  2H64 B;  5DU1 A;  4AEA A;  1NOR A;  1JGK A;  2L03 A;  3VTS A;  2CRS A;  2MHY A;  6EBX A;  1HC9 B;  1CDR A;  2ABX A;  4QTI U;  1COE A;  2GOO B;  2H62 D;  1LX5 B;  1NEA A;  1ERA A;  3QB4 B;  1ZAD A;  1RL5 A;  2UX2 A;  1UG4 A;  3LAQ U;  1LXG A;  1L4W A;  1LXH A;  2LCR A;  1W6B A;  1CRE A;  1QKD A;  2L5S A;  4OM4 A;  1XT3 A;  1KBA A;  1KC4 A;  1F94 A;  1MR6 A;  2MJY A;  3U74 U;  1M9Z A;  1TGX A;  1HOY A;  1CCQ A;  1S4Y A;  3KFD E;  1KS6 A;  1FSS B;  5IMT D;  1KFH A;  1NYS A;  2H5F A;  4ZQY A;  2H7Z A;  1NXB A;  2UWR A;  4HQP F;  1CDS A;  3HH7 A;  1CVO A;  1KL8 A;  4DO8 A;  4FAO E;  1DRS A;  2I9B E;  1IDL A;  1HC9 A;  3ERA A;  2FD6 U;  2JVE A;  3FEV A;  5DZ5 A;  2MJ0 A;  3EBX A;  3BT1 U;  1HAJ A;  2QC1 A;  2JQP A;  2CRT A;  2QJB C;  1VB0 A;  1NTX A;  1TXB A;  1IDG A;  3KFD I;  1COD A;  2CDX A;  1B41 B;  5EBX A;  4BDT B;  2BTX A;  1FAS A;  1JBD A;  1FF4 A;  2PJY C;  2QJ9 C;  4LFT A;  1TXA A;  1NTN A;  2VLW A;  3NH7 A;  1IJC A;  1IQ9 A;  1IK8 A;  5DO6 A;  2QJA C;  1V6P A;  1IDH A;  1CTX A;  1LSI A;  2ERA A;  2NBT A;  2H64 C;  1JE9 A;  1REW C;  1ONJ A;  1CHV S;  1ERG A;  3BT2 U;  1CXN A;  1HAA A;  1KTZ B;  2CTX A;  1CRF A;  2MJ4 A;  2GOO C;  3U73 U;  1CB9 A;  4BIK B;  4P7U A;  4XJJ A;  1IKC A;  2MFA A;  2BHI A;  3PLC A;  1FSC A;  2HLR A;  2J8B A;  2LA1 A;  2H62 C;  2MUO A;  1G6M A;  1YWH A;  4OM5 A;  1QM7 A;  1IDI A;  1KBS A;  1KU6 B;  5IMY C;  4EY8 B;  1KXI A;  1ES7 B;  1F8U B;  2HLQ A;  1ABT A;  1CDT A;  3EVS C;  3NEQ A; 
#chains in the Genus database with same CATH topology
 2CCX A;  1RGJ A;  2N99 A;  2OFS A;  2PJY B;  4KSN A;  1FFJ A;  1I02 A;  4UY2 C;  1CDQ A;  1MAH F;  1NYU A;  4RUD A;  2MUP A;  1PLO A;  1H0J A;  1QKE A;  3NDS A;  4FAO C;  1LJZ A;  1CXO A;  1BTE A;  1FRA A;  1KBT A;  2K3G A;  1TFS A;  2H7Z B;  2H8U A;  1BXP A;  4IYE A;  2X8B B;  2H64 B;  5DU1 A;  4AEA A;  1NOR A;  1JGK A;  2L03 A;  3VTS A;  2CRS A;  2MHY A;  6EBX A;  1HC9 B;  1CDR A;  2ABX A;  4QTI U;  1COE A;  2GOO B;  2H62 D;  1LX5 B;  1NEA A;  1ERA A;  3QB4 B;  1ZAD A;  1RL5 A;  2UX2 A;  1UG4 A;  3LAQ U;  1LXG A;  1L4W A;  1LXH A;  2LCR A;  1W6B A;  1CRE A;  1QKD A;  2L5S A;  4OM4 A;  1XT3 A;  1KBA A;  1KC4 A;  1F94 A;  1MR6 A;  2MJY A;  3U74 U;  1M9Z A;  1TGX A;  1HOY A;  1CCQ A;  1S4Y A;  3KFD E;  1KS6 A;  1FSS B;  5IMT D;  1KFH A;  1NYS A;  2H5F A;  4ZQY A;  2H7Z A;  1NXB A;  2UWR A;  4HQP F;  1CDS A;  3HH7 A;  1CVO A;  1KL8 A;  4DO8 A;  4FAO E;  1DRS A;  2I9B E;  1IDL A;  1HC9 A;  3ERA A;  2FD6 U;  2JVE A;  3FEV A;  5DZ5 A;  2MJ0 A;  3EBX A;  3BT1 U;  1HAJ A;  2QC1 A;  2JQP A;  2CRT A;  2QJB C;  1VB0 A;  1NTX A;  1TXB A;  1IDG A;  3KFD I;  1COD A;  2CDX A;  1B41 B;  5EBX A;  4BDT B;  2BTX A;  1FAS A;  1JBD A;  1FF4 A;  2PJY C;  2QJ9 C;  4LFT A;  1TXA A;  1NTN A;  2VLW A;  3NH7 A;  1IJC A;  1IQ9 A;  1IK8 A;  5DO6 A;  2QJA C;  1V6P A;  1IDH A;  1CTX A;  1LSI A;  2ERA A;  2NBT A;  2H64 C;  1JE9 A;  1REW C;  1ONJ A;  1CHV S;  1ERG A;  3BT2 U;  1CXN A;  1HAA A;  1KTZ B;  2CTX A;  1CRF A;  2MJ4 A;  2GOO C;  3U73 U;  1CB9 A;  4BIK B;  4P7U A;  4XJJ A;  1IKC A;  2MFA A;  2BHI A;  3PLC A;  1FSC A;  2HLR A;  2J8B A;  2LA1 A;  2H62 C;  2MUO A;  1G6M A;  1YWH A;  4OM5 A;  1QM7 A;  1IDI A;  1KBS A;  1KU6 B;  5IMY C;  4EY8 B;  1KXI A;  1ES7 B;  1F8U B;  2HLQ A;  1ABT A;  1CDT A;  3EVS C;  3NEQ A; 
#chains in the Genus database with same CATH homology
 2CCX A;  1RGJ A;  2N99 A;  2OFS A;  2PJY B;  4KSN A;  1FFJ A;  1I02 A;  4UY2 C;  1CDQ A;  1MAH F;  1NYU A;  4RUD A;  2MUP A;  1PLO A;  1H0J A;  1QKE A;  3NDS A;  4FAO C;  1LJZ A;  1CXO A;  1BTE A;  1FRA A;  1KBT A;  2K3G A;  1TFS A;  2H7Z B;  2H8U A;  1BXP A;  4IYE A;  2X8B B;  2H64 B;  5DU1 A;  4AEA A;  1NOR A;  1JGK A;  2L03 A;  3VTS A;  2CRS A;  2MHY A;  6EBX A;  1HC9 B;  1CDR A;  2ABX A;  4QTI U;  1COE A;  2GOO B;  2H62 D;  1LX5 B;  1NEA A;  1ERA A;  3QB4 B;  1ZAD A;  1RL5 A;  2UX2 A;  1UG4 A;  3LAQ U;  1LXG A;  1L4W A;  1LXH A;  2LCR A;  1W6B A;  1CRE A;  1QKD A;  2L5S A;  4OM4 A;  1XT3 A;  1KBA A;  1KC4 A;  1F94 A;  1MR6 A;  2MJY A;  3U74 U;  1M9Z A;  1TGX A;  1HOY A;  1CCQ A;  1S4Y A;  3KFD E;  1KS6 A;  1FSS B;  5IMT D;  1KFH A;  1NYS A;  2H5F A;  4ZQY A;  2H7Z A;  1NXB A;  2UWR A;  4HQP F;  1CDS A;  3HH7 A;  1CVO A;  1KL8 A;  4DO8 A;  4FAO E;  1DRS A;  2I9B E;  1IDL A;  1HC9 A;  3ERA A;  2FD6 U;  2JVE A;  3FEV A;  5DZ5 A;  2MJ0 A;  3EBX A;  3BT1 U;  1HAJ A;  2QC1 A;  2JQP A;  2CRT A;  2QJB C;  1VB0 A;  1NTX A;  1TXB A;  1IDG A;  3KFD I;  1COD A;  2CDX A;  1B41 B;  5EBX A;  4BDT B;  2BTX A;  1FAS A;  1JBD A;  1FF4 A;  2PJY C;  2QJ9 C;  4LFT A;  1TXA A;  1NTN A;  2VLW A;  3NH7 A;  1IJC A;  1IQ9 A;  1IK8 A;  5DO6 A;  2QJA C;  1V6P A;  1IDH A;  1CTX A;  1LSI A;  2ERA A;  2NBT A;  2H64 C;  1JE9 A;  1REW C;  1ONJ A;  1CHV S;  1ERG A;  3BT2 U;  1CXN A;  1HAA A;  1KTZ B;  2CTX A;  1CRF A;  2MJ4 A;  2GOO C;  3U73 U;  1CB9 A;  4BIK B;  4P7U A;  4XJJ A;  1IKC A;  2MFA A;  2BHI A;  3PLC A;  1FSC A;  2HLR A;  2J8B A;  2LA1 A;  2H62 C;  2MUO A;  1G6M A;  1YWH A;  4OM5 A;  1QM7 A;  1IDI A;  1KBS A;  1KU6 B;  5IMY C;  4EY8 B;  1KXI A;  1ES7 B;  1F8U B;  2HLQ A;  1ABT A;  1CDT A;  3EVS C;  3NEQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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