2PJYC

Structural basis for cooperative assembly of the tgf-beta signaling complex
Total Genus 12
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
12
sequence length
79
structure length
79
Chain Sequence
ALQCFCHLCTKDNFTCVTDGLCFVSVTETTDKVIHNSSCIAEIDLIPRDRPFVCAPSSKTGSVTTTYCCNQDHCNKIEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Cytokine/cytokine receptor
molecule keywords Transforming growth factor beta-3
publication title Cooperative assembly of TGF-beta superfamily signaling complexes is mediated by two disparate mechanisms and distinct modes of receptor binding.
pubmed doi rcsb
source organism Homo sapiens
total genus 12
structure length 79
sequence length 79
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2007-04-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF01064 Activin_recp Activin types I and II receptor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2pjyC00
1B41B 2UWRA 1REWC 3NH7A 1YWHA 1VB0A 1LJZA 2H8UA 1CB9A 6EBXA 2BHIA 1ERGA 2MJ4A 1CREA 2HLQA 1LSIA 4UY2C 1IQ9A 2ERAA 2L5SA 1KBTA 1TGXA 1M9ZA 1JBDA 1FASA 1IDIA 1KTZB 1DRSA 2CCXA 2BTXA 2CDXA 2OFSA 1ZADA 3NEQA 4FAOC 1V6PA 1CHVS 2MHYA 1NORA 1CXOA 4DO8A 1KFHA 1QM7A 4OM5A 2JQPA 2H64B 1FF4A 3FEVA 5IMTD 2VLWA 3KFDE 4ZQYA 2CRTA 1G6MA 1H0JA 1LX5B 4AEAA 5EBXA 3U74U 2HLRA 4EY8B 1FRAA 1CVOA 1ABTA 1MAHF 1L4WA 3NDSA 4HQPF 2I9BE 1LXGA 1CDTA 1HC9A 1W6BA 1RGJA 4FAOE 2K3GA 1IKCA 2GOOB 1HAAA 1KBAA 1TXAA 2H7ZA 1NYSA 2PJYC 1KXIA 1JE9A 2H7ZB 4BIKB 2MUPA 2NBTA 1MR6A 1NTNA 3QB4B 1F94A 2CRSA 2QJ9C 2QJBC 1KC4A 2MUOA 1RL5A 2FD6U 1FSSB 1TXBA 2CTXA 2QC1A 1BTEA 1CCQA 1TFSA 1UG4A 2H62C 3EBXA 2MFAA 1CTXA 1COEA 4BDTB 1ES7B 1NEAA 4QTIU 1BXPA 4XJJA 1F8UB 3PLCA 1HAJA 1NYUA 1KL8A 1IJCA 1HC9B 3EVSC 1IK8A 1IDHA 1CODA 4P7UA 1FFJA 1KU6B 1FSCA 1S4YA 1JGKA 2PJYB 2UX2A 2J8BA 3LAQU 1KBSA 1CRFA 1PLOA 2H5FA 2GOOC 2MJYA 2L03A 1QKEA 1IDLA 1LXHA 3ERAA 4LFTA 2QJAC 2LA1A 5DZ5A 1NTXA 1CDSA 5IMYC 1HOYA 3VTSA 1IDGA 2LCRA 1NXBA 3KFDI 1KS6A 2H64C 5DU1A 1ONJA 5DO6A 2MJ0A 1I02A 1CDQA 4RUDA 3BT2U 1QKDA 2X8BB 1CXNA 4IYEA 3BT1U 3U73U 1CDRA 2H62D 3HH7A 2N99A 1ERAA 2JVEA 1XT3A 4OM4A 2ABXA
chains in the Genus database with same CATH superfamily
1B41B 2UWRA 1REWC 3NH7A 1YWHA 1VB0A 1LJZA 2H8UA 1CB9A 6EBXA 2BHIA 1ERGA 2MJ4A 1CREA 2HLQA 1LSIA 4UY2C 1IQ9A 2ERAA 2L5SA 1KBTA 1TGXA 1M9ZA 1JBDA 1FASA 1IDIA 1KTZB 1DRSA 2CCXA 2BTXA 2CDXA 2OFSA 1ZADA 3NEQA 4FAOC 1V6PA 1CHVS 2MHYA 1NORA 1CXOA 4DO8A 1KFHA 1QM7A 4OM5A 2JQPA 2H64B 1FF4A 3FEVA 5IMTD 2VLWA 3KFDE 4ZQYA 2CRTA 1G6MA 1H0JA 1LX5B 4AEAA 5EBXA 3U74U 2HLRA 4EY8B 1FRAA 1CVOA 1ABTA 1MAHF 1L4WA 3NDSA 4HQPF 4KSNA 2I9BE 1LXGA 1CDTA 1HC9A 1W6BA 1RGJA 4FAOE 2K3GA 1IKCA 2GOOB 1HAAA 1KBAA 1TXAA 2H7ZA 1NYSA 2PJYC 1KXIA 1JE9A 2H7ZB 4BIKB 2MUPA 2NBTA 1MR6A 1NTNA 3QB4B 1F94A 2CRSA 2QJ9C 2QJBC 1KC4A 2MUOA 1RL5A 2FD6U 1FSSB 1TXBA 2CTXA 2QC1A 1BTEA 1CCQA 1TFSA 1UG4A 2H62C 3EBXA 2MFAA 1CTXA 1COEA 4BDTB 1ES7B 1NEAA 4QTIU 1BXPA 4XJJA 1F8UB 3PLCA 1HAJA 1NYUA 1KL8A 1IJCA 1HC9B 3EVSC 1IK8A 1IDHA 1CODA 4P7UA 1FFJA 1KU6B 1FSCA 1S4YA 1JGKA 2PJYB 2UX2A 2J8BA 3LAQU 1KBSA 1CRFA 1PLOA 2H5FA 2GOOC 2MJYA 2L03A 1QKEA 1IDLA 1LXHA 3ERAA 4LFTA 2QJAC 2LA1A 5DZ5A 1NTXA 1CDSA 5IMYC 1HOYA 3VTSA 1IDGA 2LCRA 1NXBA 3KFDI 1KS6A 2H64C 5DU1A 1ONJA 5DO6A 2MJ0A 1I02A 1CDQA 4RUDA 3BT2U 1QKDA 2X8BB 1CXNA 4IYEA 3BT1U 3U73U 1CDRA 2H62D 3HH7A 2N99A 1ERAA 2JVEA 1XT3A 4OM4A 2ABXA
chains in the Genus database with same CATH topology
1B41B 2UWRA 1REWC 3NH7A 1YWHA 1VB0A 1LJZA 2H8UA 1CB9A 6EBXA 2BHIA 1ERGA 2MJ4A 1CREA 2HLQA 1LSIA 4UY2C 1IQ9A 2ERAA 2L5SA 1KBTA 1TGXA 1M9ZA 1JBDA 1FASA 1IDIA 1KTZB 1DRSA 2CCXA 2BTXA 2CDXA 2OFSA 1ZADA 3NEQA 4FAOC 1V6PA 1CHVS 2MHYA 1NORA 1CXOA 4DO8A 1KFHA 1QM7A 4OM5A 2JQPA 2H64B 1FF4A 3FEVA 5IMTD 2VLWA 3KFDE 4ZQYA 2CRTA 1G6MA 1H0JA 1LX5B 4AEAA 5EBXA 3U74U 2HLRA 4EY8B 1FRAA 1CVOA 1ABTA 1MAHF 1L4WA 3NDSA 4HQPF 4KSNA 2I9BE 1LXGA 1CDTA 1HC9A 1W6BA 1RGJA 4FAOE 2K3GA 1IKCA 2GOOB 1HAAA 1KBAA 1TXAA 2H7ZA 1NYSA 2PJYC 1KXIA 1JE9A 2H7ZB 4BIKB 2MUPA 2NBTA 1MR6A 1NTNA 3QB4B 1F94A 2CRSA 2QJ9C 2QJBC 1KC4A 2MUOA 1RL5A 2FD6U 1FSSB 1TXBA 2CTXA 2QC1A 1BTEA 1CCQA 1TFSA 1UG4A 2H62C 3EBXA 2MFAA 1CTXA 1COEA 4BDTB 1ES7B 1NEAA 4QTIU 1BXPA 4XJJA 1F8UB 3PLCA 1HAJA 1NYUA 1KL8A 1IJCA 1HC9B 3EVSC 1IK8A 1IDHA 1CODA 4P7UA 1FFJA 1KU6B 1FSCA 1S4YA 1JGKA 2PJYB 2UX2A 2J8BA 3LAQU 1KBSA 1CRFA 1PLOA 2H5FA 2GOOC 2MJYA 2L03A 1QKEA 1IDLA 1LXHA 3ERAA 4LFTA 2QJAC 2LA1A 5DZ5A 1NTXA 1CDSA 5IMYC 1HOYA 3VTSA 1IDGA 2LCRA 1NXBA 3KFDI 1KS6A 2H64C 5DU1A 1ONJA 5DO6A 2MJ0A 1I02A 1CDQA 4RUDA 3BT2U 1QKDA 2X8BB 1CXNA 4IYEA 3BT1U 3U73U 1CDRA 2H62D 3HH7A 2N99A 1ERAA 2JVEA 1XT3A 4OM4A 2ABXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1B41 B;  2UWR A;  1REW C;  3NH7 A;  1YWH A;  1VB0 A;  1LJZ A;  2H8U A;  1CB9 A;  6EBX A;  2BHI A;  1ERG A;  2MJ4 A;  1CRE A;  2HLQ A;  1LSI A;  4UY2 C;  1IQ9 A;  2ERA A;  2L5S A;  1KBT A;  1TGX A;  1M9Z A;  1JBD A;  1FAS A;  1IDI A;  1KTZ B;  1DRS A;  2CCX A;  2BTX A;  2CDX A;  2OFS A;  1ZAD A;  3NEQ A;  4FAO C;  1V6P A;  1CHV S;  2MHY A;  1NOR A;  1CXO A;  4DO8 A;  1KFH A;  1QM7 A;  4OM5 A;  2JQP A;  2H64 B;  1FF4 A;  3FEV A;  5IMT D;  2VLW A;  3KFD E;  4ZQY A;  2CRT A;  1G6M A;  1H0J A;  1LX5 B;  4AEA A;  5EBX A;  3U74 U;  2HLR A;  4EY8 B;  1FRA A;  1CVO A;  1ABT A;  1MAH F;  1L4W A;  3NDS A;  4HQP F;  2I9B E;  1LXG A;  1CDT A;  1HC9 A;  1W6B A;  1RGJ A;  4FAO E;  2K3G A;  1IKC A;  2GOO B;  1HAA A;  1KBA A;  1TXA A;  2H7Z A;  1NYS A;  2PJY C;  1KXI A;  1JE9 A;  2H7Z B;  4BIK B;  2MUP A;  2NBT A;  1MR6 A;  1NTN A;  3QB4 B;  1F94 A;  2CRS A;  2QJ9 C;  2QJB C;  1KC4 A;  2MUO A;  1RL5 A;  2FD6 U;  1FSS B;  1TXB A;  2CTX A;  2QC1 A;  1BTE A;  1CCQ A;  1TFS A;  1UG4 A;  2H62 C;  3EBX A;  2MFA A;  1CTX A;  1COE A;  4BDT B;  1ES7 B;  1NEA A;  4QTI U;  1BXP A;  4XJJ A;  1F8U B;  3PLC A;  1HAJ A;  1NYU A;  1KL8 A;  1IJC A;  1HC9 B;  3EVS C;  1IK8 A;  1IDH A;  1COD A;  4P7U A;  1FFJ A;  1KU6 B;  1FSC A;  1S4Y A;  1JGK A;  2PJY B;  2UX2 A;  2J8B A;  3LAQ U;  1KBS A;  1CRF A;  1PLO A;  2H5F A;  2GOO C;  2MJY A;  2L03 A;  1QKE A;  1IDL A;  1LXH A;  3ERA A;  4LFT A;  2QJA C;  2LA1 A;  5DZ5 A;  1NTX A;  1CDS A;  5IMY C;  1HOY A;  3VTS A;  1IDG A;  2LCR A;  1NXB A;  3KFD I;  1KS6 A;  2H64 C;  5DU1 A;  1ONJ A;  5DO6 A;  2MJ0 A;  1I02 A;  1CDQ A;  4RUD A;  3BT2 U;  1QKD A;  2X8B B;  1CXN A;  4IYE A;  3BT1 U;  3U73 U;  1CDR A;  2H62 D;  3HH7 A;  2N99 A;  1ERA A;  2JVE A;  1XT3 A;  4OM4 A;  2ABX A; 
#chains in the Genus database with same CATH topology
 1B41 B;  2UWR A;  1REW C;  3NH7 A;  1YWH A;  1VB0 A;  1LJZ A;  2H8U A;  1CB9 A;  6EBX A;  2BHI A;  1ERG A;  2MJ4 A;  1CRE A;  2HLQ A;  1LSI A;  4UY2 C;  1IQ9 A;  2ERA A;  2L5S A;  1KBT A;  1TGX A;  1M9Z A;  1JBD A;  1FAS A;  1IDI A;  1KTZ B;  1DRS A;  2CCX A;  2BTX A;  2CDX A;  2OFS A;  1ZAD A;  3NEQ A;  4FAO C;  1V6P A;  1CHV S;  2MHY A;  1NOR A;  1CXO A;  4DO8 A;  1KFH A;  1QM7 A;  4OM5 A;  2JQP A;  2H64 B;  1FF4 A;  3FEV A;  5IMT D;  2VLW A;  3KFD E;  4ZQY A;  2CRT A;  1G6M A;  1H0J A;  1LX5 B;  4AEA A;  5EBX A;  3U74 U;  2HLR A;  4EY8 B;  1FRA A;  1CVO A;  1ABT A;  1MAH F;  1L4W A;  3NDS A;  4HQP F;  4KSN A;  2I9B E;  1LXG A;  1CDT A;  1HC9 A;  1W6B A;  1RGJ A;  4FAO E;  2K3G A;  1IKC A;  2GOO B;  1HAA A;  1KBA A;  1TXA A;  2H7Z A;  1NYS A;  2PJY C;  1KXI A;  1JE9 A;  2H7Z B;  4BIK B;  2MUP A;  2NBT A;  1MR6 A;  1NTN A;  3QB4 B;  1F94 A;  2CRS A;  2QJ9 C;  2QJB C;  1KC4 A;  2MUO A;  1RL5 A;  2FD6 U;  1FSS B;  1TXB A;  2CTX A;  2QC1 A;  1BTE A;  1CCQ A;  1TFS A;  1UG4 A;  2H62 C;  3EBX A;  2MFA A;  1CTX A;  1COE A;  4BDT B;  1ES7 B;  1NEA A;  4QTI U;  1BXP A;  4XJJ A;  1F8U B;  3PLC A;  1HAJ A;  1NYU A;  1KL8 A;  1IJC A;  1HC9 B;  3EVS C;  1IK8 A;  1IDH A;  1COD A;  4P7U A;  1FFJ A;  1KU6 B;  1FSC A;  1S4Y A;  1JGK A;  2PJY B;  2UX2 A;  2J8B A;  3LAQ U;  1KBS A;  1CRF A;  1PLO A;  2H5F A;  2GOO C;  2MJY A;  2L03 A;  1QKE A;  1IDL A;  1LXH A;  3ERA A;  4LFT A;  2QJA C;  2LA1 A;  5DZ5 A;  1NTX A;  1CDS A;  5IMY C;  1HOY A;  3VTS A;  1IDG A;  2LCR A;  1NXB A;  3KFD I;  1KS6 A;  2H64 C;  5DU1 A;  1ONJ A;  5DO6 A;  2MJ0 A;  1I02 A;  1CDQ A;  4RUD A;  3BT2 U;  1QKD A;  2X8B B;  1CXN A;  4IYE A;  3BT1 U;  3U73 U;  1CDR A;  2H62 D;  3HH7 A;  2N99 A;  1ERA A;  2JVE A;  1XT3 A;  4OM4 A;  2ABX A; 
#chains in the Genus database with same CATH homology
 1B41 B;  2UWR A;  1REW C;  3NH7 A;  1YWH A;  1VB0 A;  1LJZ A;  2H8U A;  1CB9 A;  6EBX A;  2BHI A;  1ERG A;  2MJ4 A;  1CRE A;  2HLQ A;  1LSI A;  4UY2 C;  1IQ9 A;  2ERA A;  2L5S A;  1KBT A;  1TGX A;  1M9Z A;  1JBD A;  1FAS A;  1IDI A;  1KTZ B;  1DRS A;  2CCX A;  2BTX A;  2CDX A;  2OFS A;  1ZAD A;  3NEQ A;  4FAO C;  1V6P A;  1CHV S;  2MHY A;  1NOR A;  1CXO A;  4DO8 A;  1KFH A;  1QM7 A;  4OM5 A;  2JQP A;  2H64 B;  1FF4 A;  3FEV A;  5IMT D;  2VLW A;  3KFD E;  4ZQY A;  2CRT A;  1G6M A;  1H0J A;  1LX5 B;  4AEA A;  5EBX A;  3U74 U;  2HLR A;  4EY8 B;  1FRA A;  1CVO A;  1ABT A;  1MAH F;  1L4W A;  3NDS A;  4HQP F;  4KSN A;  2I9B E;  1LXG A;  1CDT A;  1HC9 A;  1W6B A;  1RGJ A;  4FAO E;  2K3G A;  1IKC A;  2GOO B;  1HAA A;  1KBA A;  1TXA A;  2H7Z A;  1NYS A;  2PJY C;  1KXI A;  1JE9 A;  2H7Z B;  4BIK B;  2MUP A;  2NBT A;  1MR6 A;  1NTN A;  3QB4 B;  1F94 A;  2CRS A;  2QJ9 C;  2QJB C;  1KC4 A;  2MUO A;  1RL5 A;  2FD6 U;  1FSS B;  1TXB A;  2CTX A;  2QC1 A;  1BTE A;  1CCQ A;  1TFS A;  1UG4 A;  2H62 C;  3EBX A;  2MFA A;  1CTX A;  1COE A;  4BDT B;  1ES7 B;  1NEA A;  4QTI U;  1BXP A;  4XJJ A;  1F8U B;  3PLC A;  1HAJ A;  1NYU A;  1KL8 A;  1IJC A;  1HC9 B;  3EVS C;  1IK8 A;  1IDH A;  1COD A;  4P7U A;  1FFJ A;  1KU6 B;  1FSC A;  1S4Y A;  1JGK A;  2PJY B;  2UX2 A;  2J8B A;  3LAQ U;  1KBS A;  1CRF A;  1PLO A;  2H5F A;  2GOO C;  2MJY A;  2L03 A;  1QKE A;  1IDL A;  1LXH A;  3ERA A;  4LFT A;  2QJA C;  2LA1 A;  5DZ5 A;  1NTX A;  1CDS A;  5IMY C;  1HOY A;  3VTS A;  1IDG A;  2LCR A;  1NXB A;  3KFD I;  1KS6 A;  2H64 C;  5DU1 A;  1ONJ A;  5DO6 A;  2MJ0 A;  1I02 A;  1CDQ A;  4RUD A;  3BT2 U;  1QKD A;  2X8B B;  1CXN A;  4IYE A;  3BT1 U;  3U73 U;  1CDR A;  2H62 D;  3HH7 A;  2N99 A;  1ERA A;  2JVE A;  1XT3 A;  4OM4 A;  2ABX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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