4ZQYA

Ringhalexin from hemachatus haemachatus: a novel inhibitor of extrinsic tenase complex
Total Genus 11
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
11
sequence length
65
structure length
65
Chain Sequence
RLCLSDYSIFSETIEICPEGHNYCFKKFPKGITRLPWVIRGCAATCPKPEAQVYVDCCARDKCNR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Toxin
molecule keywords Ringhalexin
publication title Ringhalexin from Hemachatus haemachatus: A novel inhibitor of extrinsic tenase complex.
pubmed doi rcsb
total genus 11
structure length 65
sequence length 65
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2015-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 4zqyA00
3LAQU 2MJ0A 5DZ5A 2GOOC 4QTIU 3U74U 1YWHA 1CODA 1LXGA 2ABXA 1NYSA 2H62D 3VTSA 2MJ4A 4BDTB 1NYUA 3EVSC 1H0JA 4XJJA 2H5FA 1VB0A 3ERAA 3KFDE 1RL5A 2CRSA 2PJYB 2QJBC 3BT1U 4EY8B 1TXAA 6EBXA 1TGXA 1B41B 4LFTA 1PLOA 5IMYC 1MAHF 3QB4B 1NORA 1QKDA 1TFSA 2H8UA 1HOYA 1BXPA 2BHIA 1JGKA 2VLWA 1RGJA 2HLQA 1FRAA 3NDSA 4ZQYA 4OM5A 5EBXA 1COEA 5DU1A 1KBSA 1FSCA 2MUOA 2BTXA 1NEAA 1TXBA 2N99A 2MUPA 2OFSA 1LX5B 2H7ZB 2MHYA 2FD6U 1MR6A 3HH7A 1IKCA 1CDRA 3FEVA 1CRFA 1FASA 1KBAA 1IDIA 1KU6B 2H64B 2NBTA 1F8UB 2HLRA 2UX2A 4AEAA 4RUDA 1V6PA 1CDTA 2GOOB 1HC9B 1CXOA 1IDLA 2PJYC 1UG4A 1CTXA 1REWC 1IDGA 4UY2C 1LJZA 1CCQA 3NEQA 1KFHA 1JE9A 2K3GA 1KTZB 1CHVS 4FAOE 1CXNA 3NH7A 2ERAA 1ERGA 2CCXA 1DRSA 1ES7B 1G6MA 1FFJA 3PLCA 1KC4A 1HAJA 1NTXA 2LA1A 1CB9A 2QJAC 3EBXA 3U73U 1CREA 1W6BA 1CVOA 4HQPF 1JBDA 1QM7A 1BTEA 2LCRA 1KXIA 4P7UA 5IMTD 4IYEA 1FSSB 1CDQA 2JQPA 1NXBA 1S4YA 1ZADA 1KL8A 2H64C 2I9BE 2MJYA 1IDHA 1IK8A 2H7ZA 2L5SA 1L4WA 3BT2U 1IQ9A 2UWRA 2L03A 2H62C 2QJ9C 3KFDI 2J8BA 1KS6A 1ABTA 5DO6A 1HC9A 1M9ZA 2CTXA 1FF4A 2CRTA 2X8BB 4DO8A 4BIKB 1CDSA 1F94A 4OM4A 1HAAA 4FAOC 1LSIA 1LXHA 1QKEA 1IJCA 2CDXA 2QC1A 1ONJA 2JVEA 1NTNA 1I02A 1KBTA 2MFAA 1XT3A 1ERAA
chains in the Genus database with same CATH superfamily
3LAQU 2MJ0A 5DZ5A 2GOOC 4QTIU 3U74U 1YWHA 1CODA 1LXGA 2ABXA 1NYSA 2H62D 3VTSA 2MJ4A 4BDTB 1NYUA 4KSNA 3EVSC 1H0JA 4XJJA 2H5FA 1VB0A 3ERAA 3KFDE 1RL5A 2CRSA 2PJYB 2QJBC 3BT1U 4EY8B 1TXAA 6EBXA 1TGXA 1B41B 4LFTA 1PLOA 5IMYC 1MAHF 3QB4B 1NORA 1QKDA 1TFSA 2H8UA 1HOYA 1BXPA 2BHIA 1JGKA 2VLWA 1RGJA 2HLQA 1FRAA 3NDSA 4ZQYA 4OM5A 5EBXA 1COEA 5DU1A 1KBSA 1FSCA 2MUOA 2BTXA 1NEAA 1TXBA 2N99A 2MUPA 2OFSA 1LX5B 2H7ZB 2MHYA 2FD6U 1MR6A 3HH7A 1IKCA 1CDRA 3FEVA 1CRFA 1FASA 1KBAA 1IDIA 1KU6B 2H64B 2NBTA 1F8UB 2HLRA 2UX2A 4AEAA 4RUDA 1V6PA 1CDTA 2GOOB 1HC9B 1CXOA 1IDLA 2PJYC 1UG4A 1CTXA 1REWC 1IDGA 4UY2C 1LJZA 1CCQA 3NEQA 1KFHA 1JE9A 2K3GA 1KTZB 1CHVS 4FAOE 1CXNA 3NH7A 2ERAA 1ERGA 2CCXA 1DRSA 1ES7B 1G6MA 1FFJA 3PLCA 1KC4A 1HAJA 1NTXA 2LA1A 1CB9A 2QJAC 3EBXA 3U73U 1CREA 1W6BA 1CVOA 4HQPF 1JBDA 1QM7A 1BTEA 2LCRA 1KXIA 4P7UA 5IMTD 4IYEA 1FSSB 1CDQA 2JQPA 1NXBA 1S4YA 1ZADA 1KL8A 2H64C 2I9BE 2MJYA 1IDHA 1IK8A 2H7ZA 2L5SA 1L4WA 3BT2U 1IQ9A 2UWRA 2L03A 2H62C 2QJ9C 3KFDI 2J8BA 1KS6A 1ABTA 5DO6A 1HC9A 1M9ZA 2CTXA 1FF4A 2CRTA 2X8BB 4DO8A 4BIKB 1CDSA 1F94A 4OM4A 1HAAA 4FAOC 1LSIA 1LXHA 1QKEA 1IJCA 2CDXA 2QC1A 1ONJA 2JVEA 1NTNA 1I02A 1KBTA 2MFAA 1XT3A 1ERAA
chains in the Genus database with same CATH topology
3LAQU 2MJ0A 5DZ5A 2GOOC 4QTIU 3U74U 1YWHA 1CODA 1LXGA 2ABXA 1NYSA 2H62D 3VTSA 2MJ4A 4BDTB 1NYUA 4KSNA 3EVSC 1H0JA 4XJJA 2H5FA 1VB0A 3ERAA 3KFDE 1RL5A 2CRSA 2PJYB 2QJBC 3BT1U 4EY8B 1TXAA 6EBXA 1TGXA 1B41B 4LFTA 1PLOA 5IMYC 1MAHF 3QB4B 1NORA 1QKDA 1TFSA 2H8UA 1HOYA 1BXPA 2BHIA 1JGKA 2VLWA 1RGJA 2HLQA 1FRAA 3NDSA 4ZQYA 4OM5A 5EBXA 1COEA 5DU1A 1KBSA 1FSCA 2MUOA 2BTXA 1NEAA 1TXBA 2N99A 2MUPA 2OFSA 1LX5B 2H7ZB 2MHYA 2FD6U 1MR6A 3HH7A 1IKCA 1CDRA 3FEVA 1CRFA 1FASA 1KBAA 1IDIA 1KU6B 2H64B 2NBTA 1F8UB 2HLRA 2UX2A 4AEAA 4RUDA 1V6PA 1CDTA 2GOOB 1HC9B 1CXOA 1IDLA 2PJYC 1UG4A 1CTXA 1REWC 1IDGA 4UY2C 1LJZA 1CCQA 3NEQA 1KFHA 1JE9A 2K3GA 1KTZB 1CHVS 4FAOE 1CXNA 3NH7A 2ERAA 1ERGA 2CCXA 1DRSA 1ES7B 1G6MA 1FFJA 3PLCA 1KC4A 1HAJA 1NTXA 2LA1A 1CB9A 2QJAC 3EBXA 3U73U 1CREA 1W6BA 1CVOA 4HQPF 1JBDA 1QM7A 1BTEA 2LCRA 1KXIA 4P7UA 5IMTD 4IYEA 1FSSB 1CDQA 2JQPA 1NXBA 1S4YA 1ZADA 1KL8A 2H64C 2I9BE 2MJYA 1IDHA 1IK8A 2H7ZA 2L5SA 1L4WA 3BT2U 1IQ9A 2UWRA 2L03A 2H62C 2QJ9C 3KFDI 2J8BA 1KS6A 1ABTA 5DO6A 1HC9A 1M9ZA 2CTXA 1FF4A 2CRTA 2X8BB 4DO8A 4BIKB 1CDSA 1F94A 4OM4A 1HAAA 4FAOC 1LSIA 1LXHA 1QKEA 1IJCA 2CDXA 2QC1A 1ONJA 2JVEA 1NTNA 1I02A 1KBTA 2MFAA 1XT3A 1ERAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LAQ U;  2MJ0 A;  5DZ5 A;  2GOO C;  4QTI U;  3U74 U;  1YWH A;  1COD A;  1LXG A;  2ABX A;  1NYS A;  2H62 D;  3VTS A;  2MJ4 A;  4BDT B;  1NYU A;  3EVS C;  1H0J A;  4XJJ A;  2H5F A;  1VB0 A;  3ERA A;  3KFD E;  1RL5 A;  2CRS A;  2PJY B;  2QJB C;  3BT1 U;  4EY8 B;  1TXA A;  6EBX A;  1TGX A;  1B41 B;  4LFT A;  1PLO A;  5IMY C;  1MAH F;  3QB4 B;  1NOR A;  1QKD A;  1TFS A;  2H8U A;  1HOY A;  1BXP A;  2BHI A;  1JGK A;  2VLW A;  1RGJ A;  2HLQ A;  1FRA A;  3NDS A;  4ZQY A;  4OM5 A;  5EBX A;  1COE A;  5DU1 A;  1KBS A;  1FSC A;  2MUO A;  2BTX A;  1NEA A;  1TXB A;  2N99 A;  2MUP A;  2OFS A;  1LX5 B;  2H7Z B;  2MHY A;  2FD6 U;  1MR6 A;  3HH7 A;  1IKC A;  1CDR A;  3FEV A;  1CRF A;  1FAS A;  1KBA A;  1IDI A;  1KU6 B;  2H64 B;  2NBT A;  1F8U B;  2HLR A;  2UX2 A;  4AEA A;  4RUD A;  1V6P A;  1CDT A;  2GOO B;  1HC9 B;  1CXO A;  1IDL A;  2PJY C;  1UG4 A;  1CTX A;  1REW C;  1IDG A;  4UY2 C;  1LJZ A;  1CCQ A;  3NEQ A;  1KFH A;  1JE9 A;  2K3G A;  1KTZ B;  1CHV S;  4FAO E;  1CXN A;  3NH7 A;  2ERA A;  1ERG A;  2CCX A;  1DRS A;  1ES7 B;  1G6M A;  1FFJ A;  3PLC A;  1KC4 A;  1HAJ A;  1NTX A;  2LA1 A;  1CB9 A;  2QJA C;  3EBX A;  3U73 U;  1CRE A;  1W6B A;  1CVO A;  4HQP F;  1JBD A;  1QM7 A;  1BTE A;  2LCR A;  1KXI A;  4P7U A;  5IMT D;  4IYE A;  1FSS B;  1CDQ A;  2JQP A;  1NXB A;  1S4Y A;  1ZAD A;  1KL8 A;  2H64 C;  2I9B E;  2MJY A;  1IDH A;  1IK8 A;  2H7Z A;  2L5S A;  1L4W A;  3BT2 U;  1IQ9 A;  2UWR A;  2L03 A;  2H62 C;  2QJ9 C;  3KFD I;  2J8B A;  1KS6 A;  1ABT A;  5DO6 A;  1HC9 A;  1M9Z A;  2CTX A;  1FF4 A;  2CRT A;  2X8B B;  4DO8 A;  4BIK B;  1CDS A;  1F94 A;  4OM4 A;  1HAA A;  4FAO C;  1LSI A;  1LXH A;  1QKE A;  1IJC A;  2CDX A;  2QC1 A;  1ONJ A;  2JVE A;  1NTN A;  1I02 A;  1KBT A;  2MFA A;  1XT3 A;  1ERA A; 
#chains in the Genus database with same CATH topology
 3LAQ U;  2MJ0 A;  5DZ5 A;  2GOO C;  4QTI U;  3U74 U;  1YWH A;  1COD A;  1LXG A;  2ABX A;  1NYS A;  2H62 D;  3VTS A;  2MJ4 A;  4BDT B;  1NYU A;  4KSN A;  3EVS C;  1H0J A;  4XJJ A;  2H5F A;  1VB0 A;  3ERA A;  3KFD E;  1RL5 A;  2CRS A;  2PJY B;  2QJB C;  3BT1 U;  4EY8 B;  1TXA A;  6EBX A;  1TGX A;  1B41 B;  4LFT A;  1PLO A;  5IMY C;  1MAH F;  3QB4 B;  1NOR A;  1QKD A;  1TFS A;  2H8U A;  1HOY A;  1BXP A;  2BHI A;  1JGK A;  2VLW A;  1RGJ A;  2HLQ A;  1FRA A;  3NDS A;  4ZQY A;  4OM5 A;  5EBX A;  1COE A;  5DU1 A;  1KBS A;  1FSC A;  2MUO A;  2BTX A;  1NEA A;  1TXB A;  2N99 A;  2MUP A;  2OFS A;  1LX5 B;  2H7Z B;  2MHY A;  2FD6 U;  1MR6 A;  3HH7 A;  1IKC A;  1CDR A;  3FEV A;  1CRF A;  1FAS A;  1KBA A;  1IDI A;  1KU6 B;  2H64 B;  2NBT A;  1F8U B;  2HLR A;  2UX2 A;  4AEA A;  4RUD A;  1V6P A;  1CDT A;  2GOO B;  1HC9 B;  1CXO A;  1IDL A;  2PJY C;  1UG4 A;  1CTX A;  1REW C;  1IDG A;  4UY2 C;  1LJZ A;  1CCQ A;  3NEQ A;  1KFH A;  1JE9 A;  2K3G A;  1KTZ B;  1CHV S;  4FAO E;  1CXN A;  3NH7 A;  2ERA A;  1ERG A;  2CCX A;  1DRS A;  1ES7 B;  1G6M A;  1FFJ A;  3PLC A;  1KC4 A;  1HAJ A;  1NTX A;  2LA1 A;  1CB9 A;  2QJA C;  3EBX A;  3U73 U;  1CRE A;  1W6B A;  1CVO A;  4HQP F;  1JBD A;  1QM7 A;  1BTE A;  2LCR A;  1KXI A;  4P7U A;  5IMT D;  4IYE A;  1FSS B;  1CDQ A;  2JQP A;  1NXB A;  1S4Y A;  1ZAD A;  1KL8 A;  2H64 C;  2I9B E;  2MJY A;  1IDH A;  1IK8 A;  2H7Z A;  2L5S A;  1L4W A;  3BT2 U;  1IQ9 A;  2UWR A;  2L03 A;  2H62 C;  2QJ9 C;  3KFD I;  2J8B A;  1KS6 A;  1ABT A;  5DO6 A;  1HC9 A;  1M9Z A;  2CTX A;  1FF4 A;  2CRT A;  2X8B B;  4DO8 A;  4BIK B;  1CDS A;  1F94 A;  4OM4 A;  1HAA A;  4FAO C;  1LSI A;  1LXH A;  1QKE A;  1IJC A;  2CDX A;  2QC1 A;  1ONJ A;  2JVE A;  1NTN A;  1I02 A;  1KBT A;  2MFA A;  1XT3 A;  1ERA A; 
#chains in the Genus database with same CATH homology
 3LAQ U;  2MJ0 A;  5DZ5 A;  2GOO C;  4QTI U;  3U74 U;  1YWH A;  1COD A;  1LXG A;  2ABX A;  1NYS A;  2H62 D;  3VTS A;  2MJ4 A;  4BDT B;  1NYU A;  4KSN A;  3EVS C;  1H0J A;  4XJJ A;  2H5F A;  1VB0 A;  3ERA A;  3KFD E;  1RL5 A;  2CRS A;  2PJY B;  2QJB C;  3BT1 U;  4EY8 B;  1TXA A;  6EBX A;  1TGX A;  1B41 B;  4LFT A;  1PLO A;  5IMY C;  1MAH F;  3QB4 B;  1NOR A;  1QKD A;  1TFS A;  2H8U A;  1HOY A;  1BXP A;  2BHI A;  1JGK A;  2VLW A;  1RGJ A;  2HLQ A;  1FRA A;  3NDS A;  4ZQY A;  4OM5 A;  5EBX A;  1COE A;  5DU1 A;  1KBS A;  1FSC A;  2MUO A;  2BTX A;  1NEA A;  1TXB A;  2N99 A;  2MUP A;  2OFS A;  1LX5 B;  2H7Z B;  2MHY A;  2FD6 U;  1MR6 A;  3HH7 A;  1IKC A;  1CDR A;  3FEV A;  1CRF A;  1FAS A;  1KBA A;  1IDI A;  1KU6 B;  2H64 B;  2NBT A;  1F8U B;  2HLR A;  2UX2 A;  4AEA A;  4RUD A;  1V6P A;  1CDT A;  2GOO B;  1HC9 B;  1CXO A;  1IDL A;  2PJY C;  1UG4 A;  1CTX A;  1REW C;  1IDG A;  4UY2 C;  1LJZ A;  1CCQ A;  3NEQ A;  1KFH A;  1JE9 A;  2K3G A;  1KTZ B;  1CHV S;  4FAO E;  1CXN A;  3NH7 A;  2ERA A;  1ERG A;  2CCX A;  1DRS A;  1ES7 B;  1G6M A;  1FFJ A;  3PLC A;  1KC4 A;  1HAJ A;  1NTX A;  2LA1 A;  1CB9 A;  2QJA C;  3EBX A;  3U73 U;  1CRE A;  1W6B A;  1CVO A;  4HQP F;  1JBD A;  1QM7 A;  1BTE A;  2LCR A;  1KXI A;  4P7U A;  5IMT D;  4IYE A;  1FSS B;  1CDQ A;  2JQP A;  1NXB A;  1S4Y A;  1ZAD A;  1KL8 A;  2H64 C;  2I9B E;  2MJY A;  1IDH A;  1IK8 A;  2H7Z A;  2L5S A;  1L4W A;  3BT2 U;  1IQ9 A;  2UWR A;  2L03 A;  2H62 C;  2QJ9 C;  3KFD I;  2J8B A;  1KS6 A;  1ABT A;  5DO6 A;  1HC9 A;  1M9Z A;  2CTX A;  1FF4 A;  2CRT A;  2X8B B;  4DO8 A;  4BIK B;  1CDS A;  1F94 A;  4OM4 A;  1HAA A;  4FAO C;  1LSI A;  1LXH A;  1QKE A;  1IJC A;  2CDX A;  2QC1 A;  1ONJ A;  2JVE A;  1NTN A;  1I02 A;  1KBT A;  2MFA A;  1XT3 A;  1ERA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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