1S4YA

Crystal structure of the activin/actriib extracellular domain
Total Genus 22
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
91
structure length
91
Chain Sequence
b'RECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLP'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title A Flexible Activin Explains the Membrane-Dependent Cooperative Assembly of TGF-beta Family Receptors.
pubmed doi rcsb
molecule keywords Activin receptor type IIB precursor
source organism Mus musculus
molecule tags Transferase
total genus 22
structure length 91
sequence length 91
chains with identical sequence C
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2004-01-19
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1s4yA00
1IK8A 1M9ZA 1RGJA 4LFTA 1B41B 1BXPA 1CTXA 1QKDA 1KL8A 5IMYC 3ERAA 1NTNA 3VTSA 2H8UA 2QJBC 3FEVA 1NTXA 2J8BA 5DO6A 1CCQA 3U74U 1TGXA 1ERAA 2PJYC 1NYUA 2JQPA 4OM5A 5DZ5A 3U73U 3EVSC 4FAOC 1CDQA 2NBTA 1HC9A 1REWC 1KC4A 1XT3A 2ABXA 2GOOC 4UY2C 1LXGA 1UG4A 1CB9A 2PJYB 3KFDE 4HQPF 1CVOA 1HAAA 1DRSA 1LX5B 2ERAA 1IQ9A 2CCXA 3NH7A 4FAOE 4AEAA 1CDSA 3NDSA 2GOOB 6EBXA 1CXNA 2LCRA 4P7UA 1NYSA 1ZADA 2H5FA 2I9BE 1IKCA 1KBAA 1CREA 1HOYA 2JVEA 1ONJA 2MUOA 2UX2A 4DO8A 1QM7A 4IYEA 2MJ0A 3NEQA 1KTZB 1HAJA 1NXBA 5IMTD 1VB0A 3LAQU 3EBXA 3BT1U 1KBSA 2H7ZB 1QKEA 2FD6U 1CHVS 2H7ZA 2BHIA 1FRAA 2HLRA 1CDTA 2MUPA 2OFSA 1CXOA 2N99A 2L5SA 1TXAA 4BDTB 1JGKA 2VLWA 1KU6B 1JE9A 2X8BB 3HH7A 1KBTA 1FSCA 1F8UB 1CODA 1ABTA 2CRTA 2UWRA 1IDIA 2BTXA 4RUDA 1H0JA 1ERGA 1LJZA 2K3GA 1IJCA 1L4WA 1NEAA 2MJYA 1MR6A 4BIKB 1S4YA 2L03A 1COEA 2H62C 4OM4A 2CRSA 2H64C 2HLQA 1I02A 1LXHA 1PLOA 1W6BA 1KXIA 2QC1A 1CDRA 2LA1A 3KFDI 1IDHA 1FASA 1LSIA 3BT2U 1RL5A 3PLCA 1FFJA 1MAHF 1IDGA 1YWHA 1KS6A 1G6MA 2H64B 1F94A 1CRFA 1BTEA 1HC9B 5EBXA 4XJJA 1JBDA 1KFHA 1FF4A 2QJAC 3QB4B 2H62D 4ZQYA 1ES7B 2MFAA 2CTXA 1IDLA 5DU1A 1NORA 1FSSB 4QTIU 2MHYA 2CDXA 1TXBA 2QJ9C 1V6PA 4EY8B 2MJ4A 1TFSA
chains in the Genus database with same CATH superfamily
1IK8A 1M9ZA 1RGJA 4LFTA 1B41B 1BXPA 1CTXA 1QKDA 1KL8A 5IMYC 3ERAA 1NTNA 3VTSA 2H8UA 2QJBC 3FEVA 1NTXA 2J8BA 5DO6A 1CCQA 3U74U 1TGXA 1ERAA 2PJYC 1NYUA 2JQPA 4OM5A 5DZ5A 3U73U 3EVSC 4FAOC 1CDQA 2NBTA 1HC9A 1REWC 1KC4A 1XT3A 2ABXA 2GOOC 4UY2C 1LXGA 1UG4A 1CB9A 2PJYB 3KFDE 4HQPF 1CVOA 1HAAA 1DRSA 1LX5B 2ERAA 1IQ9A 2CCXA 3NH7A 4FAOE 4AEAA 1CDSA 3NDSA 2GOOB 6EBXA 1CXNA 2LCRA 4P7UA 1NYSA 1ZADA 2H5FA 2I9BE 1IKCA 1KBAA 1CREA 1HOYA 2JVEA 1ONJA 2MUOA 2UX2A 4DO8A 1QM7A 4IYEA 2MJ0A 3NEQA 1KTZB 1HAJA 1NXBA 5IMTD 1VB0A 3LAQU 3EBXA 3BT1U 1KBSA 2H7ZB 1QKEA 2FD6U 1CHVS 2H7ZA 2BHIA 1FRAA 2HLRA 1CDTA 2MUPA 2OFSA 1CXOA 2N99A 2L5SA 1TXAA 4BDTB 1JGKA 2VLWA 1KU6B 1JE9A 2X8BB 3HH7A 1KBTA 1FSCA 1F8UB 1CODA 1ABTA 2CRTA 2UWRA 1IDIA 2BTXA 4RUDA 1H0JA 1ERGA 1LJZA 2K3GA 1IJCA 1L4WA 1NEAA 2MJYA 1MR6A 4BIKB 1S4YA 2L03A 1COEA 4KSNA 2H62C 4OM4A 2CRSA 2H64C 2HLQA 1I02A 1LXHA 1PLOA 1W6BA 1KXIA 2QC1A 1CDRA 2LA1A 3KFDI 1IDHA 1FASA 1LSIA 3BT2U 1RL5A 3PLCA 1FFJA 1MAHF 1IDGA 1YWHA 1KS6A 1G6MA 2H64B 1F94A 1CRFA 1BTEA 1HC9B 5EBXA 4XJJA 1JBDA 1KFHA 1FF4A 2QJAC 3QB4B 2H62D 4ZQYA 1ES7B 2MFAA 2CTXA 1IDLA 5DU1A 1NORA 1FSSB 4QTIU 2MHYA 2CDXA 1TXBA 2QJ9C 1V6PA 4EY8B 2MJ4A 1TFSA
chains in the Genus database with same CATH topology
1IK8A 1M9ZA 1RGJA 4LFTA 1B41B 1BXPA 1CTXA 1QKDA 1KL8A 5IMYC 3ERAA 1NTNA 3VTSA 2H8UA 2QJBC 3FEVA 1NTXA 2J8BA 5DO6A 1CCQA 3U74U 1TGXA 1ERAA 2PJYC 1NYUA 2JQPA 4OM5A 5DZ5A 3U73U 3EVSC 4FAOC 1CDQA 2NBTA 1HC9A 1REWC 1KC4A 1XT3A 2ABXA 2GOOC 4UY2C 1LXGA 1UG4A 1CB9A 2PJYB 3KFDE 4HQPF 1CVOA 1HAAA 1DRSA 1LX5B 2ERAA 1IQ9A 2CCXA 3NH7A 4FAOE 4AEAA 1CDSA 3NDSA 2GOOB 6EBXA 1CXNA 2LCRA 4P7UA 1NYSA 1ZADA 2H5FA 2I9BE 1IKCA 1KBAA 1CREA 1HOYA 2JVEA 1ONJA 2MUOA 2UX2A 4DO8A 1QM7A 4IYEA 2MJ0A 3NEQA 1KTZB 1HAJA 1NXBA 5IMTD 1VB0A 3LAQU 3EBXA 3BT1U 1KBSA 2H7ZB 1QKEA 2FD6U 1CHVS 2H7ZA 2BHIA 1FRAA 2HLRA 1CDTA 2MUPA 2OFSA 1CXOA 2N99A 2L5SA 1TXAA 4BDTB 1JGKA 2VLWA 1KU6B 1JE9A 2X8BB 3HH7A 1KBTA 1FSCA 1F8UB 1CODA 1ABTA 2CRTA 2UWRA 1IDIA 2BTXA 4RUDA 1H0JA 1ERGA 1LJZA 2K3GA 1IJCA 1L4WA 1NEAA 2MJYA 1MR6A 4BIKB 1S4YA 2L03A 1COEA 4KSNA 2H62C 4OM4A 2CRSA 2H64C 2HLQA 1I02A 1LXHA 1PLOA 1W6BA 1KXIA 2QC1A 1CDRA 2LA1A 3KFDI 1IDHA 1FASA 1LSIA 3BT2U 1RL5A 3PLCA 1FFJA 1MAHF 1IDGA 1YWHA 1KS6A 1G6MA 2H64B 1F94A 1CRFA 1BTEA 1HC9B 5EBXA 4XJJA 1JBDA 1KFHA 1FF4A 2QJAC 3QB4B 2H62D 4ZQYA 1ES7B 2MFAA 2CTXA 1IDLA 5DU1A 1NORA 1FSSB 4QTIU 2MHYA 2CDXA 1TXBA 2QJ9C 1V6PA 4EY8B 2MJ4A 1TFSA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1IK8 A;  1M9Z A;  1RGJ A;  4LFT A;  1B41 B;  1BXP A;  1CTX A;  1QKD A;  1KL8 A;  5IMY C;  3ERA A;  1NTN A;  3VTS A;  2H8U A;  2QJB C;  3FEV A;  1NTX A;  2J8B A;  5DO6 A;  1CCQ A;  3U74 U;  1TGX A;  1ERA A;  2PJY C;  1NYU A;  2JQP A;  4OM5 A;  5DZ5 A;  3U73 U;  3EVS C;  4FAO C;  1CDQ A;  2NBT A;  1HC9 A;  1REW C;  1KC4 A;  1XT3 A;  2ABX A;  2GOO C;  4UY2 C;  1LXG A;  1UG4 A;  1CB9 A;  2PJY B;  3KFD E;  4HQP F;  1CVO A;  1HAA A;  1DRS A;  1LX5 B;  2ERA A;  1IQ9 A;  2CCX A;  3NH7 A;  4FAO E;  4AEA A;  1CDS A;  3NDS A;  2GOO B;  6EBX A;  1CXN A;  2LCR A;  4P7U A;  1NYS A;  1ZAD A;  2H5F A;  2I9B E;  1IKC A;  1KBA A;  1CRE A;  1HOY A;  2JVE A;  1ONJ A;  2MUO A;  2UX2 A;  4DO8 A;  1QM7 A;  4IYE A;  2MJ0 A;  3NEQ A;  1KTZ B;  1HAJ A;  1NXB A;  5IMT D;  1VB0 A;  3LAQ U;  3EBX A;  3BT1 U;  1KBS A;  2H7Z B;  1QKE A;  2FD6 U;  1CHV S;  2H7Z A;  2BHI A;  1FRA A;  2HLR A;  1CDT A;  2MUP A;  2OFS A;  1CXO A;  2N99 A;  2L5S A;  1TXA A;  4BDT B;  1JGK A;  2VLW A;  1KU6 B;  1JE9 A;  2X8B B;  3HH7 A;  1KBT A;  1FSC A;  1F8U B;  1COD A;  1ABT A;  2CRT A;  2UWR A;  1IDI A;  2BTX A;  4RUD A;  1H0J A;  1ERG A;  1LJZ A;  2K3G A;  1IJC A;  1L4W A;  1NEA A;  2MJY A;  1MR6 A;  4BIK B;  1S4Y A;  2L03 A;  1COE A;  2H62 C;  4OM4 A;  2CRS A;  2H64 C;  2HLQ A;  1I02 A;  1LXH A;  1PLO A;  1W6B A;  1KXI A;  2QC1 A;  1CDR A;  2LA1 A;  3KFD I;  1IDH A;  1FAS A;  1LSI A;  3BT2 U;  1RL5 A;  3PLC A;  1FFJ A;  1MAH F;  1IDG A;  1YWH A;  1KS6 A;  1G6M A;  2H64 B;  1F94 A;  1CRF A;  1BTE A;  1HC9 B;  5EBX A;  4XJJ A;  1JBD A;  1KFH A;  1FF4 A;  2QJA C;  3QB4 B;  2H62 D;  4ZQY A;  1ES7 B;  2MFA A;  2CTX A;  1IDL A;  5DU1 A;  1NOR A;  1FSS B;  4QTI U;  2MHY A;  2CDX A;  1TXB A;  2QJ9 C;  1V6P A;  4EY8 B;  2MJ4 A;  1TFS A; 
#chains in the Genus database with same CATH topology
 1IK8 A;  1M9Z A;  1RGJ A;  4LFT A;  1B41 B;  1BXP A;  1CTX A;  1QKD A;  1KL8 A;  5IMY C;  3ERA A;  1NTN A;  3VTS A;  2H8U A;  2QJB C;  3FEV A;  1NTX A;  2J8B A;  5DO6 A;  1CCQ A;  3U74 U;  1TGX A;  1ERA A;  2PJY C;  1NYU A;  2JQP A;  4OM5 A;  5DZ5 A;  3U73 U;  3EVS C;  4FAO C;  1CDQ A;  2NBT A;  1HC9 A;  1REW C;  1KC4 A;  1XT3 A;  2ABX A;  2GOO C;  4UY2 C;  1LXG A;  1UG4 A;  1CB9 A;  2PJY B;  3KFD E;  4HQP F;  1CVO A;  1HAA A;  1DRS A;  1LX5 B;  2ERA A;  1IQ9 A;  2CCX A;  3NH7 A;  4FAO E;  4AEA A;  1CDS A;  3NDS A;  2GOO B;  6EBX A;  1CXN A;  2LCR A;  4P7U A;  1NYS A;  1ZAD A;  2H5F A;  2I9B E;  1IKC A;  1KBA A;  1CRE A;  1HOY A;  2JVE A;  1ONJ A;  2MUO A;  2UX2 A;  4DO8 A;  1QM7 A;  4IYE A;  2MJ0 A;  3NEQ A;  1KTZ B;  1HAJ A;  1NXB A;  5IMT D;  1VB0 A;  3LAQ U;  3EBX A;  3BT1 U;  1KBS A;  2H7Z B;  1QKE A;  2FD6 U;  1CHV S;  2H7Z A;  2BHI A;  1FRA A;  2HLR A;  1CDT A;  2MUP A;  2OFS A;  1CXO A;  2N99 A;  2L5S A;  1TXA A;  4BDT B;  1JGK A;  2VLW A;  1KU6 B;  1JE9 A;  2X8B B;  3HH7 A;  1KBT A;  1FSC A;  1F8U B;  1COD A;  1ABT A;  2CRT A;  2UWR A;  1IDI A;  2BTX A;  4RUD A;  1H0J A;  1ERG A;  1LJZ A;  2K3G A;  1IJC A;  1L4W A;  1NEA A;  2MJY A;  1MR6 A;  4BIK B;  1S4Y A;  2L03 A;  1COE A;  4KSN A;  2H62 C;  4OM4 A;  2CRS A;  2H64 C;  2HLQ A;  1I02 A;  1LXH A;  1PLO A;  1W6B A;  1KXI A;  2QC1 A;  1CDR A;  2LA1 A;  3KFD I;  1IDH A;  1FAS A;  1LSI A;  3BT2 U;  1RL5 A;  3PLC A;  1FFJ A;  1MAH F;  1IDG A;  1YWH A;  1KS6 A;  1G6M A;  2H64 B;  1F94 A;  1CRF A;  1BTE A;  1HC9 B;  5EBX A;  4XJJ A;  1JBD A;  1KFH A;  1FF4 A;  2QJA C;  3QB4 B;  2H62 D;  4ZQY A;  1ES7 B;  2MFA A;  2CTX A;  1IDL A;  5DU1 A;  1NOR A;  1FSS B;  4QTI U;  2MHY A;  2CDX A;  1TXB A;  2QJ9 C;  1V6P A;  4EY8 B;  2MJ4 A;  1TFS A; 
#chains in the Genus database with same CATH homology
 1IK8 A;  1M9Z A;  1RGJ A;  4LFT A;  1B41 B;  1BXP A;  1CTX A;  1QKD A;  1KL8 A;  5IMY C;  3ERA A;  1NTN A;  3VTS A;  2H8U A;  2QJB C;  3FEV A;  1NTX A;  2J8B A;  5DO6 A;  1CCQ A;  3U74 U;  1TGX A;  1ERA A;  2PJY C;  1NYU A;  2JQP A;  4OM5 A;  5DZ5 A;  3U73 U;  3EVS C;  4FAO C;  1CDQ A;  2NBT A;  1HC9 A;  1REW C;  1KC4 A;  1XT3 A;  2ABX A;  2GOO C;  4UY2 C;  1LXG A;  1UG4 A;  1CB9 A;  2PJY B;  3KFD E;  4HQP F;  1CVO A;  1HAA A;  1DRS A;  1LX5 B;  2ERA A;  1IQ9 A;  2CCX A;  3NH7 A;  4FAO E;  4AEA A;  1CDS A;  3NDS A;  2GOO B;  6EBX A;  1CXN A;  2LCR A;  4P7U A;  1NYS A;  1ZAD A;  2H5F A;  2I9B E;  1IKC A;  1KBA A;  1CRE A;  1HOY A;  2JVE A;  1ONJ A;  2MUO A;  2UX2 A;  4DO8 A;  1QM7 A;  4IYE A;  2MJ0 A;  3NEQ A;  1KTZ B;  1HAJ A;  1NXB A;  5IMT D;  1VB0 A;  3LAQ U;  3EBX A;  3BT1 U;  1KBS A;  2H7Z B;  1QKE A;  2FD6 U;  1CHV S;  2H7Z A;  2BHI A;  1FRA A;  2HLR A;  1CDT A;  2MUP A;  2OFS A;  1CXO A;  2N99 A;  2L5S A;  1TXA A;  4BDT B;  1JGK A;  2VLW A;  1KU6 B;  1JE9 A;  2X8B B;  3HH7 A;  1KBT A;  1FSC A;  1F8U B;  1COD A;  1ABT A;  2CRT A;  2UWR A;  1IDI A;  2BTX A;  4RUD A;  1H0J A;  1ERG A;  1LJZ A;  2K3G A;  1IJC A;  1L4W A;  1NEA A;  2MJY A;  1MR6 A;  4BIK B;  1S4Y A;  2L03 A;  1COE A;  4KSN A;  2H62 C;  4OM4 A;  2CRS A;  2H64 C;  2HLQ A;  1I02 A;  1LXH A;  1PLO A;  1W6B A;  1KXI A;  2QC1 A;  1CDR A;  2LA1 A;  3KFD I;  1IDH A;  1FAS A;  1LSI A;  3BT2 U;  1RL5 A;  3PLC A;  1FFJ A;  1MAH F;  1IDG A;  1YWH A;  1KS6 A;  1G6M A;  2H64 B;  1F94 A;  1CRF A;  1BTE A;  1HC9 B;  5EBX A;  4XJJ A;  1JBD A;  1KFH A;  1FF4 A;  2QJA C;  3QB4 B;  2H62 D;  4ZQY A;  1ES7 B;  2MFA A;  2CTX A;  1IDL A;  5DU1 A;  1NOR A;  1FSS B;  4QTI U;  2MHY A;  2CDX A;  1TXB A;  2QJ9 C;  1V6P A;  4EY8 B;  2MJ4 A;  1TFS A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...