2MUOA

Structure of the trans-(tyr39-pro40) form of the human secreted ly-6/upar related protein-1 (slurp-1)
Total Genus 5
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
5
sequence length
82
structure length
82
Chain Sequence
MLKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCNSEL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Secreted Ly-6/uPAR-related protein 1
publication title Structural and Functional Properties of Human Secreted Ly-6/uPAR Related Protein-1 (SLURP-1) Imply a Non-Canonical Mode of Interaction with 7 nAChR
rcsb
source organism Homo sapiens
molecule tags Neuropeptide
total genus 5
structure length 82
sequence length 82
ec nomenclature
pdb deposition date 2014-09-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00021 UPAR_LY6 u-PAR/Ly-6 domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 2muoA00
1XT3A 2CRTA 2OFSA 2QJ9C 1HC9A 1TXBA 3BT1U 2PJYC 3LAQU 1KBTA 1LX5B 3VTSA 2H5FA 1KS6A 1ERAA 1F8UB 1LJZA 2QC1A 2CTXA 1BXPA 1DRSA 1IQ9A 1H0JA 4FAOE 2MJ0A 4QTIU 4UY2C 1BTEA 2H7ZA 3ERAA 1HOYA 3KFDI 1CDRA 2HLRA 1TGXA 1CCQA 2H62D 2X8BB 1CB9A 2FD6U 6EBXA 1CDQA 2MJYA 1NORA 4LFTA 1CDSA 1HC9B 5DZ5A 1G6MA 1I02A 1KXIA 4P7UA 2CDXA 1IDHA 1CXNA 2QJAC 4RUDA 2ERAA 2CCXA 2GOOB 1IJCA 3FEVA 3QB4B 5EBXA 1TXAA 1CXOA 2H64B 2UX2A 2BTXA 4OM5A 2H7ZB 1W6BA 1ZADA 2JQPA 4AEAA 4EY8B 1MR6A 1JGKA 2BHIA 2MHYA 1ABTA 4ZQYA 3NDSA 1NYSA 2LA1A 1B41B 2L5SA 2J8BA 2HLQA 1ERGA 1FFJA 1KBSA 2MFAA 2N99A 1ES7B 1FSSB 3EVSC 2JVEA 5DO6A 1FRAA 2H8UA 1HAAA 2PJYB 1NTXA 3NEQA 2ABXA 1COEA 1QKEA 1NYUA 1REWC 2MUPA 2UWRA 1CRFA 1IK8A 1TFSA 3KFDE 1L4WA 1CVOA 1LSIA 1CDTA 1KL8A 1IDIA 2L03A 4OM4A 1KFHA 2I9BE 1HAJA 4HQPF 2NBTA 2H62C 3HH7A 1KU6B 1KC4A 1JBDA 4XJJA 4BDTB 2GOOC 1V6PA 3NH7A 4FAOC 1RL5A 3EBXA 4DO8A 5IMTD 2H64C 1LXGA 1FF4A 1JE9A 1VB0A 2MUOA 1KBAA 2VLWA 1CREA 1FSCA 3U74U 4IYEA 1CTXA 1F94A 1RGJA 2LCRA 1IDGA 1NEAA 1FASA 1PLOA 1MAHF 2MJ4A 1LXHA 1NTNA 1CHVS 2K3GA 1UG4A 5DU1A 4BIKB 1IKCA 1S4YA 1NXBA 3U73U 1M9ZA 1CODA 5IMYC 1QKDA 2CRSA 1QM7A 1KTZB 1ONJA 2QJBC 3BT2U 1IDLA 3PLCA 1YWHA
chains in the Genus database with same CATH superfamily
1XT3A 2CRTA 2OFSA 2QJ9C 1HC9A 1TXBA 3BT1U 2PJYC 3LAQU 1KBTA 1LX5B 3VTSA 2H5FA 1KS6A 1ERAA 1F8UB 1LJZA 2QC1A 2CTXA 1BXPA 1DRSA 1IQ9A 1H0JA 4FAOE 2MJ0A 4QTIU 4UY2C 1BTEA 2H7ZA 3ERAA 1HOYA 3KFDI 1CDRA 2HLRA 1TGXA 1CCQA 2H62D 2X8BB 1CB9A 2FD6U 6EBXA 1CDQA 2MJYA 1NORA 4LFTA 1CDSA 1HC9B 5DZ5A 1G6MA 1I02A 1KXIA 4P7UA 2CDXA 1IDHA 1CXNA 2QJAC 4RUDA 2ERAA 2CCXA 2GOOB 1IJCA 3FEVA 3QB4B 5EBXA 1TXAA 1CXOA 2H64B 2UX2A 2BTXA 4OM5A 2H7ZB 1W6BA 1ZADA 2JQPA 4AEAA 4EY8B 1MR6A 1JGKA 2BHIA 2MHYA 1ABTA 4ZQYA 3NDSA 1NYSA 2LA1A 1B41B 2L5SA 2J8BA 2HLQA 1ERGA 1FFJA 1KBSA 2MFAA 2N99A 1ES7B 1FSSB 3EVSC 2JVEA 5DO6A 1FRAA 2H8UA 1HAAA 2PJYB 1NTXA 3NEQA 2ABXA 1COEA 1QKEA 1NYUA 1REWC 2MUPA 2UWRA 1CRFA 1IK8A 1TFSA 3KFDE 1L4WA 1CVOA 1LSIA 1CDTA 1KL8A 1IDIA 2L03A 4OM4A 1KFHA 2I9BE 1HAJA 4HQPF 2NBTA 2H62C 3HH7A 1KU6B 1KC4A 1JBDA 4XJJA 4BDTB 2GOOC 1V6PA 3NH7A 4KSNA 4FAOC 1RL5A 3EBXA 4DO8A 5IMTD 2H64C 1LXGA 1FF4A 1JE9A 1VB0A 2MUOA 1KBAA 2VLWA 1CREA 1FSCA 3U74U 4IYEA 1CTXA 1F94A 1RGJA 2LCRA 1IDGA 1NEAA 1FASA 1PLOA 1MAHF 2MJ4A 1LXHA 1NTNA 1CHVS 2K3GA 1UG4A 5DU1A 4BIKB 1IKCA 1S4YA 1NXBA 3U73U 1M9ZA 1CODA 5IMYC 1QKDA 2CRSA 1QM7A 1KTZB 1ONJA 2QJBC 3BT2U 1IDLA 3PLCA 1YWHA
chains in the Genus database with same CATH topology
1XT3A 2CRTA 2OFSA 2QJ9C 1HC9A 1TXBA 3BT1U 2PJYC 3LAQU 1KBTA 1LX5B 3VTSA 2H5FA 1KS6A 1ERAA 1F8UB 1LJZA 2QC1A 2CTXA 1BXPA 1DRSA 1IQ9A 1H0JA 4FAOE 2MJ0A 4QTIU 4UY2C 1BTEA 2H7ZA 3ERAA 1HOYA 3KFDI 1CDRA 2HLRA 1TGXA 1CCQA 2H62D 2X8BB 1CB9A 2FD6U 6EBXA 1CDQA 2MJYA 1NORA 4LFTA 1CDSA 1HC9B 5DZ5A 1G6MA 1I02A 1KXIA 4P7UA 2CDXA 1IDHA 1CXNA 2QJAC 4RUDA 2ERAA 2CCXA 2GOOB 1IJCA 3FEVA 3QB4B 5EBXA 1TXAA 1CXOA 2H64B 2UX2A 2BTXA 4OM5A 2H7ZB 1W6BA 1ZADA 2JQPA 4AEAA 4EY8B 1MR6A 1JGKA 2BHIA 2MHYA 1ABTA 4ZQYA 3NDSA 1NYSA 2LA1A 1B41B 2L5SA 2J8BA 2HLQA 1ERGA 1FFJA 1KBSA 2MFAA 2N99A 1ES7B 1FSSB 3EVSC 2JVEA 5DO6A 1FRAA 2H8UA 1HAAA 2PJYB 1NTXA 3NEQA 2ABXA 1COEA 1QKEA 1NYUA 1REWC 2MUPA 2UWRA 1CRFA 1IK8A 1TFSA 3KFDE 1L4WA 1CVOA 1LSIA 1CDTA 1KL8A 1IDIA 2L03A 4OM4A 1KFHA 2I9BE 1HAJA 4HQPF 2NBTA 2H62C 3HH7A 1KU6B 1KC4A 1JBDA 4XJJA 4BDTB 2GOOC 1V6PA 3NH7A 4KSNA 4FAOC 1RL5A 3EBXA 4DO8A 5IMTD 2H64C 1LXGA 1FF4A 1JE9A 1VB0A 2MUOA 1KBAA 2VLWA 1CREA 1FSCA 3U74U 4IYEA 1CTXA 1F94A 1RGJA 2LCRA 1IDGA 1NEAA 1FASA 1PLOA 1MAHF 2MJ4A 1LXHA 1NTNA 1CHVS 2K3GA 1UG4A 5DU1A 4BIKB 1IKCA 1S4YA 1NXBA 3U73U 1M9ZA 1CODA 5IMYC 1QKDA 2CRSA 1QM7A 1KTZB 1ONJA 2QJBC 3BT2U 1IDLA 3PLCA 1YWHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1XT3 A;  2CRT A;  2OFS A;  2QJ9 C;  1HC9 A;  1TXB A;  3BT1 U;  2PJY C;  3LAQ U;  1KBT A;  1LX5 B;  3VTS A;  2H5F A;  1KS6 A;  1ERA A;  1F8U B;  1LJZ A;  2QC1 A;  2CTX A;  1BXP A;  1DRS A;  1IQ9 A;  1H0J A;  4FAO E;  2MJ0 A;  4QTI U;  4UY2 C;  1BTE A;  2H7Z A;  3ERA A;  1HOY A;  3KFD I;  1CDR A;  2HLR A;  1TGX A;  1CCQ A;  2H62 D;  2X8B B;  1CB9 A;  2FD6 U;  6EBX A;  1CDQ A;  2MJY A;  1NOR A;  4LFT A;  1CDS A;  1HC9 B;  5DZ5 A;  1G6M A;  1I02 A;  1KXI A;  4P7U A;  2CDX A;  1IDH A;  1CXN A;  2QJA C;  4RUD A;  2ERA A;  2CCX A;  2GOO B;  1IJC A;  3FEV A;  3QB4 B;  5EBX A;  1TXA A;  1CXO A;  2H64 B;  2UX2 A;  2BTX A;  4OM5 A;  2H7Z B;  1W6B A;  1ZAD A;  2JQP A;  4AEA A;  4EY8 B;  1MR6 A;  1JGK A;  2BHI A;  2MHY A;  1ABT A;  4ZQY A;  3NDS A;  1NYS A;  2LA1 A;  1B41 B;  2L5S A;  2J8B A;  2HLQ A;  1ERG A;  1FFJ A;  1KBS A;  2MFA A;  2N99 A;  1ES7 B;  1FSS B;  3EVS C;  2JVE A;  5DO6 A;  1FRA A;  2H8U A;  1HAA A;  2PJY B;  1NTX A;  3NEQ A;  2ABX A;  1COE A;  1QKE A;  1NYU A;  1REW C;  2MUP A;  2UWR A;  1CRF A;  1IK8 A;  1TFS A;  3KFD E;  1L4W A;  1CVO A;  1LSI A;  1CDT A;  1KL8 A;  1IDI A;  2L03 A;  4OM4 A;  1KFH A;  2I9B E;  1HAJ A;  4HQP F;  2NBT A;  2H62 C;  3HH7 A;  1KU6 B;  1KC4 A;  1JBD A;  4XJJ A;  4BDT B;  2GOO C;  1V6P A;  3NH7 A;  4FAO C;  1RL5 A;  3EBX A;  4DO8 A;  5IMT D;  2H64 C;  1LXG A;  1FF4 A;  1JE9 A;  1VB0 A;  2MUO A;  1KBA A;  2VLW A;  1CRE A;  1FSC A;  3U74 U;  4IYE A;  1CTX A;  1F94 A;  1RGJ A;  2LCR A;  1IDG A;  1NEA A;  1FAS A;  1PLO A;  1MAH F;  2MJ4 A;  1LXH A;  1NTN A;  1CHV S;  2K3G A;  1UG4 A;  5DU1 A;  4BIK B;  1IKC A;  1S4Y A;  1NXB A;  3U73 U;  1M9Z A;  1COD A;  5IMY C;  1QKD A;  2CRS A;  1QM7 A;  1KTZ B;  1ONJ A;  2QJB C;  3BT2 U;  1IDL A;  3PLC A;  1YWH A; 
#chains in the Genus database with same CATH topology
 1XT3 A;  2CRT A;  2OFS A;  2QJ9 C;  1HC9 A;  1TXB A;  3BT1 U;  2PJY C;  3LAQ U;  1KBT A;  1LX5 B;  3VTS A;  2H5F A;  1KS6 A;  1ERA A;  1F8U B;  1LJZ A;  2QC1 A;  2CTX A;  1BXP A;  1DRS A;  1IQ9 A;  1H0J A;  4FAO E;  2MJ0 A;  4QTI U;  4UY2 C;  1BTE A;  2H7Z A;  3ERA A;  1HOY A;  3KFD I;  1CDR A;  2HLR A;  1TGX A;  1CCQ A;  2H62 D;  2X8B B;  1CB9 A;  2FD6 U;  6EBX A;  1CDQ A;  2MJY A;  1NOR A;  4LFT A;  1CDS A;  1HC9 B;  5DZ5 A;  1G6M A;  1I02 A;  1KXI A;  4P7U A;  2CDX A;  1IDH A;  1CXN A;  2QJA C;  4RUD A;  2ERA A;  2CCX A;  2GOO B;  1IJC A;  3FEV A;  3QB4 B;  5EBX A;  1TXA A;  1CXO A;  2H64 B;  2UX2 A;  2BTX A;  4OM5 A;  2H7Z B;  1W6B A;  1ZAD A;  2JQP A;  4AEA A;  4EY8 B;  1MR6 A;  1JGK A;  2BHI A;  2MHY A;  1ABT A;  4ZQY A;  3NDS A;  1NYS A;  2LA1 A;  1B41 B;  2L5S A;  2J8B A;  2HLQ A;  1ERG A;  1FFJ A;  1KBS A;  2MFA A;  2N99 A;  1ES7 B;  1FSS B;  3EVS C;  2JVE A;  5DO6 A;  1FRA A;  2H8U A;  1HAA A;  2PJY B;  1NTX A;  3NEQ A;  2ABX A;  1COE A;  1QKE A;  1NYU A;  1REW C;  2MUP A;  2UWR A;  1CRF A;  1IK8 A;  1TFS A;  3KFD E;  1L4W A;  1CVO A;  1LSI A;  1CDT A;  1KL8 A;  1IDI A;  2L03 A;  4OM4 A;  1KFH A;  2I9B E;  1HAJ A;  4HQP F;  2NBT A;  2H62 C;  3HH7 A;  1KU6 B;  1KC4 A;  1JBD A;  4XJJ A;  4BDT B;  2GOO C;  1V6P A;  3NH7 A;  4KSN A;  4FAO C;  1RL5 A;  3EBX A;  4DO8 A;  5IMT D;  2H64 C;  1LXG A;  1FF4 A;  1JE9 A;  1VB0 A;  2MUO A;  1KBA A;  2VLW A;  1CRE A;  1FSC A;  3U74 U;  4IYE A;  1CTX A;  1F94 A;  1RGJ A;  2LCR A;  1IDG A;  1NEA A;  1FAS A;  1PLO A;  1MAH F;  2MJ4 A;  1LXH A;  1NTN A;  1CHV S;  2K3G A;  1UG4 A;  5DU1 A;  4BIK B;  1IKC A;  1S4Y A;  1NXB A;  3U73 U;  1M9Z A;  1COD A;  5IMY C;  1QKD A;  2CRS A;  1QM7 A;  1KTZ B;  1ONJ A;  2QJB C;  3BT2 U;  1IDL A;  3PLC A;  1YWH A; 
#chains in the Genus database with same CATH homology
 1XT3 A;  2CRT A;  2OFS A;  2QJ9 C;  1HC9 A;  1TXB A;  3BT1 U;  2PJY C;  3LAQ U;  1KBT A;  1LX5 B;  3VTS A;  2H5F A;  1KS6 A;  1ERA A;  1F8U B;  1LJZ A;  2QC1 A;  2CTX A;  1BXP A;  1DRS A;  1IQ9 A;  1H0J A;  4FAO E;  2MJ0 A;  4QTI U;  4UY2 C;  1BTE A;  2H7Z A;  3ERA A;  1HOY A;  3KFD I;  1CDR A;  2HLR A;  1TGX A;  1CCQ A;  2H62 D;  2X8B B;  1CB9 A;  2FD6 U;  6EBX A;  1CDQ A;  2MJY A;  1NOR A;  4LFT A;  1CDS A;  1HC9 B;  5DZ5 A;  1G6M A;  1I02 A;  1KXI A;  4P7U A;  2CDX A;  1IDH A;  1CXN A;  2QJA C;  4RUD A;  2ERA A;  2CCX A;  2GOO B;  1IJC A;  3FEV A;  3QB4 B;  5EBX A;  1TXA A;  1CXO A;  2H64 B;  2UX2 A;  2BTX A;  4OM5 A;  2H7Z B;  1W6B A;  1ZAD A;  2JQP A;  4AEA A;  4EY8 B;  1MR6 A;  1JGK A;  2BHI A;  2MHY A;  1ABT A;  4ZQY A;  3NDS A;  1NYS A;  2LA1 A;  1B41 B;  2L5S A;  2J8B A;  2HLQ A;  1ERG A;  1FFJ A;  1KBS A;  2MFA A;  2N99 A;  1ES7 B;  1FSS B;  3EVS C;  2JVE A;  5DO6 A;  1FRA A;  2H8U A;  1HAA A;  2PJY B;  1NTX A;  3NEQ A;  2ABX A;  1COE A;  1QKE A;  1NYU A;  1REW C;  2MUP A;  2UWR A;  1CRF A;  1IK8 A;  1TFS A;  3KFD E;  1L4W A;  1CVO A;  1LSI A;  1CDT A;  1KL8 A;  1IDI A;  2L03 A;  4OM4 A;  1KFH A;  2I9B E;  1HAJ A;  4HQP F;  2NBT A;  2H62 C;  3HH7 A;  1KU6 B;  1KC4 A;  1JBD A;  4XJJ A;  4BDT B;  2GOO C;  1V6P A;  3NH7 A;  4KSN A;  4FAO C;  1RL5 A;  3EBX A;  4DO8 A;  5IMT D;  2H64 C;  1LXG A;  1FF4 A;  1JE9 A;  1VB0 A;  2MUO A;  1KBA A;  2VLW A;  1CRE A;  1FSC A;  3U74 U;  4IYE A;  1CTX A;  1F94 A;  1RGJ A;  2LCR A;  1IDG A;  1NEA A;  1FAS A;  1PLO A;  1MAH F;  2MJ4 A;  1LXH A;  1NTN A;  1CHV S;  2K3G A;  1UG4 A;  5DU1 A;  4BIK B;  1IKC A;  1S4Y A;  1NXB A;  3U73 U;  1M9Z A;  1COD A;  5IMY C;  1QKD A;  2CRS A;  1QM7 A;  1KTZ B;  1ONJ A;  2QJB C;  3BT2 U;  1IDL A;  3PLC A;  1YWH A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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