1TXAA

Solution nmr structure of toxin b, a long neurotoxin from the venom of the king cobra, minimized average structure
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
73
structure length
73
Chain Sequence
TKCYVTPDATSQTCPDGQDICYTKTWCDGFCSSRGKRIDLGCAATCPKVKPGVDIKCCSTDNCNPFPTWKRKH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Neurotoxin
molecule keywords TOXIN B
publication title Solution structure of toxin b, a long neurotoxin from the venom of the king cobra (Ophiophagus hannah).
pubmed doi rcsb
total genus 4
structure length 73
sequence length 73
ec nomenclature
pdb deposition date 1996-07-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1txaA00
1CCQA 4OM5A 1CB9A 1KBAA 1B41B 1KXIA 1ABTA 1HOYA 1FFJA 3LAQU 2VLWA 2MJ4A 2H8UA 1JE9A 1IJCA 2GOOB 2UWRA 2CRTA 4UY2C 1I02A 1DRSA 4BDTB 1IK8A 1CTXA 4FAOC 1F94A 1IDHA 2MJ0A 2LA1A 4ZQYA 2ABXA 3NH7A 1REWC 1RL5A 3ERAA 1NORA 2HLQA 2QJBC 1CDSA 3EVSC 1BTEA 5DZ5A 1IKCA 1VB0A 2H64C 1HC9B 2FD6U 4IYEA 1ERGA 5DU1A 2JQPA 1QKEA 3PLCA 1LXGA 1W6BA 1CXNA 1KU6B 1NEAA 1IDGA 2L5SA 4FAOE 3BT2U 3U74U 2L03A 2H62D 1COEA 1KTZB 2PJYC 2QJAC 1ERAA 4AEAA 1ONJA 2NBTA 3QB4B 3VTSA 1CHVS 1H0JA 1XT3A 1CVOA 1KS6A 2QC1A 2MHYA 1RGJA 3EBXA 1KBTA 2CTXA 4XJJA 2LCRA 1LX5B 5DO6A 4BIKB 1QM7A 1FRAA 1KFHA 1MAHF 1CREA 4RUDA 1NTXA 1CODA 1TGXA 2MJYA 1YWHA 2X8BB 1V6PA 5IMTD 1HAJA 1JBDA 3NDSA 1IDIA 3HH7A 4OM4A 1CRFA 1FASA 1F8UB 1PLOA 2BHIA 2I9BE 5IMYC 1ES7B 2H7ZB 2OFSA 1CDQA 1KC4A 2CRSA 4QTIU 1UG4A 1ZADA 1KBSA 3U73U 2QJ9C 1QKDA 2GOOC 1NTNA 4LFTA 2UX2A 1KL8A 5EBXA 1M9ZA 1FF4A 1NYUA 2H64B 2J8BA 4EY8B 4HQPF 2ERAA 2CCXA 2MUOA 2H62C 1IQ9A 1FSCA 1HC9A 1LJZA 1TXBA 3KFDI 2MUPA 6EBXA 1L4WA 2MFAA 1TXAA 1CXOA 3BT1U 1HAAA 2BTXA 2H7ZA 2HLRA 2PJYB 1CDRA 4P7UA 1IDLA 3KFDE 2K3GA 3NEQA 1LXHA 1LSIA 1NXBA 1NYSA 3FEVA 1S4YA 1CDTA 1FSSB 1TFSA 2CDXA 1BXPA 1MR6A 2JVEA 4DO8A 2N99A 2H5FA 1G6MA 1JGKA
chains in the Genus database with same CATH superfamily
1CCQA 4OM5A 1CB9A 1KBAA 1B41B 1KXIA 1ABTA 1HOYA 1FFJA 3LAQU 2VLWA 2MJ4A 2H8UA 1JE9A 1IJCA 2GOOB 2UWRA 2CRTA 4UY2C 1I02A 1DRSA 4BDTB 1IK8A 1CTXA 4FAOC 1F94A 1IDHA 2MJ0A 2LA1A 4ZQYA 2ABXA 3NH7A 1REWC 1RL5A 3ERAA 1NORA 2HLQA 2QJBC 1CDSA 3EVSC 1BTEA 5DZ5A 1IKCA 1VB0A 2H64C 1HC9B 2FD6U 4IYEA 1ERGA 5DU1A 2JQPA 1QKEA 3PLCA 1LXGA 1W6BA 1CXNA 1KU6B 1NEAA 1IDGA 2L5SA 4FAOE 3BT2U 3U74U 2L03A 2H62D 1COEA 1KTZB 2PJYC 2QJAC 1ERAA 4AEAA 1ONJA 2NBTA 3QB4B 3VTSA 1CHVS 1H0JA 1XT3A 1CVOA 1KS6A 2QC1A 2MHYA 1RGJA 3EBXA 1KBTA 2CTXA 4XJJA 2LCRA 1LX5B 5DO6A 4BIKB 1QM7A 1FRAA 1KFHA 1MAHF 1CREA 4RUDA 1NTXA 1CODA 1TGXA 2MJYA 1YWHA 2X8BB 1V6PA 5IMTD 1HAJA 1JBDA 3NDSA 1IDIA 3HH7A 4OM4A 1CRFA 1FASA 1F8UB 1PLOA 2BHIA 2I9BE 5IMYC 1ES7B 2H7ZB 2OFSA 1CDQA 1KC4A 2CRSA 4QTIU 1UG4A 1ZADA 1KBSA 3U73U 2QJ9C 1QKDA 2GOOC 1NTNA 4LFTA 2UX2A 1KL8A 5EBXA 1M9ZA 1FF4A 1NYUA 2H64B 2J8BA 4EY8B 4HQPF 2ERAA 2CCXA 2MUOA 2H62C 1IQ9A 1FSCA 1HC9A 1LJZA 1TXBA 3KFDI 2MUPA 6EBXA 1L4WA 2MFAA 1TXAA 1CXOA 3BT1U 1HAAA 4KSNA 2BTXA 2H7ZA 2HLRA 2PJYB 1CDRA 4P7UA 1IDLA 3KFDE 2K3GA 3NEQA 1LXHA 1LSIA 1NXBA 1NYSA 3FEVA 1S4YA 1CDTA 1FSSB 1TFSA 2CDXA 1BXPA 1MR6A 2JVEA 4DO8A 2N99A 2H5FA 1G6MA 1JGKA
chains in the Genus database with same CATH topology
1CCQA 4OM5A 1CB9A 1KBAA 1B41B 1KXIA 1ABTA 1HOYA 1FFJA 3LAQU 2VLWA 2MJ4A 2H8UA 1JE9A 1IJCA 2GOOB 2UWRA 2CRTA 4UY2C 1I02A 1DRSA 4BDTB 1IK8A 1CTXA 4FAOC 1F94A 1IDHA 2MJ0A 2LA1A 4ZQYA 2ABXA 3NH7A 1REWC 1RL5A 3ERAA 1NORA 2HLQA 2QJBC 1CDSA 3EVSC 1BTEA 5DZ5A 1IKCA 1VB0A 2H64C 1HC9B 2FD6U 4IYEA 1ERGA 5DU1A 2JQPA 1QKEA 3PLCA 1LXGA 1W6BA 1CXNA 1KU6B 1NEAA 1IDGA 2L5SA 4FAOE 3BT2U 3U74U 2L03A 2H62D 1COEA 1KTZB 2PJYC 2QJAC 1ERAA 4AEAA 1ONJA 2NBTA 3QB4B 3VTSA 1CHVS 1H0JA 1XT3A 1CVOA 1KS6A 2QC1A 2MHYA 1RGJA 3EBXA 1KBTA 2CTXA 4XJJA 2LCRA 1LX5B 5DO6A 4BIKB 1QM7A 1FRAA 1KFHA 1MAHF 1CREA 4RUDA 1NTXA 1CODA 1TGXA 2MJYA 1YWHA 2X8BB 1V6PA 5IMTD 1HAJA 1JBDA 3NDSA 1IDIA 3HH7A 4OM4A 1CRFA 1FASA 1F8UB 1PLOA 2BHIA 2I9BE 5IMYC 1ES7B 2H7ZB 2OFSA 1CDQA 1KC4A 2CRSA 4QTIU 1UG4A 1ZADA 1KBSA 3U73U 2QJ9C 1QKDA 2GOOC 1NTNA 4LFTA 2UX2A 1KL8A 5EBXA 1M9ZA 1FF4A 1NYUA 2H64B 2J8BA 4EY8B 4HQPF 2ERAA 2CCXA 2MUOA 2H62C 1IQ9A 1FSCA 1HC9A 1LJZA 1TXBA 3KFDI 2MUPA 6EBXA 1L4WA 2MFAA 1TXAA 1CXOA 3BT1U 1HAAA 4KSNA 2BTXA 2H7ZA 2HLRA 2PJYB 1CDRA 4P7UA 1IDLA 3KFDE 2K3GA 3NEQA 1LXHA 1LSIA 1NXBA 1NYSA 3FEVA 1S4YA 1CDTA 1FSSB 1TFSA 2CDXA 1BXPA 1MR6A 2JVEA 4DO8A 2N99A 2H5FA 1G6MA 1JGKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CCQ A;  4OM5 A;  1CB9 A;  1KBA A;  1B41 B;  1KXI A;  1ABT A;  1HOY A;  1FFJ A;  3LAQ U;  2VLW A;  2MJ4 A;  2H8U A;  1JE9 A;  1IJC A;  2GOO B;  2UWR A;  2CRT A;  4UY2 C;  1I02 A;  1DRS A;  4BDT B;  1IK8 A;  1CTX A;  4FAO C;  1F94 A;  1IDH A;  2MJ0 A;  2LA1 A;  4ZQY A;  2ABX A;  3NH7 A;  1REW C;  1RL5 A;  3ERA A;  1NOR A;  2HLQ A;  2QJB C;  1CDS A;  3EVS C;  1BTE A;  5DZ5 A;  1IKC A;  1VB0 A;  2H64 C;  1HC9 B;  2FD6 U;  4IYE A;  1ERG A;  5DU1 A;  2JQP A;  1QKE A;  3PLC A;  1LXG A;  1W6B A;  1CXN A;  1KU6 B;  1NEA A;  1IDG A;  2L5S A;  4FAO E;  3BT2 U;  3U74 U;  2L03 A;  2H62 D;  1COE A;  1KTZ B;  2PJY C;  2QJA C;  1ERA A;  4AEA A;  1ONJ A;  2NBT A;  3QB4 B;  3VTS A;  1CHV S;  1H0J A;  1XT3 A;  1CVO A;  1KS6 A;  2QC1 A;  2MHY A;  1RGJ A;  3EBX A;  1KBT A;  2CTX A;  4XJJ A;  2LCR A;  1LX5 B;  5DO6 A;  4BIK B;  1QM7 A;  1FRA A;  1KFH A;  1MAH F;  1CRE A;  4RUD A;  1NTX A;  1COD A;  1TGX A;  2MJY A;  1YWH A;  2X8B B;  1V6P A;  5IMT D;  1HAJ A;  1JBD A;  3NDS A;  1IDI A;  3HH7 A;  4OM4 A;  1CRF A;  1FAS A;  1F8U B;  1PLO A;  2BHI A;  2I9B E;  5IMY C;  1ES7 B;  2H7Z B;  2OFS A;  1CDQ A;  1KC4 A;  2CRS A;  4QTI U;  1UG4 A;  1ZAD A;  1KBS A;  3U73 U;  2QJ9 C;  1QKD A;  2GOO C;  1NTN A;  4LFT A;  2UX2 A;  1KL8 A;  5EBX A;  1M9Z A;  1FF4 A;  1NYU A;  2H64 B;  2J8B A;  4EY8 B;  4HQP F;  2ERA A;  2CCX A;  2MUO A;  2H62 C;  1IQ9 A;  1FSC A;  1HC9 A;  1LJZ A;  1TXB A;  3KFD I;  2MUP A;  6EBX A;  1L4W A;  2MFA A;  1TXA A;  1CXO A;  3BT1 U;  1HAA A;  2BTX A;  2H7Z A;  2HLR A;  2PJY B;  1CDR A;  4P7U A;  1IDL A;  3KFD E;  2K3G A;  3NEQ A;  1LXH A;  1LSI A;  1NXB A;  1NYS A;  3FEV A;  1S4Y A;  1CDT A;  1FSS B;  1TFS A;  2CDX A;  1BXP A;  1MR6 A;  2JVE A;  4DO8 A;  2N99 A;  2H5F A;  1G6M A;  1JGK A; 
#chains in the Genus database with same CATH topology
 1CCQ A;  4OM5 A;  1CB9 A;  1KBA A;  1B41 B;  1KXI A;  1ABT A;  1HOY A;  1FFJ A;  3LAQ U;  2VLW A;  2MJ4 A;  2H8U A;  1JE9 A;  1IJC A;  2GOO B;  2UWR A;  2CRT A;  4UY2 C;  1I02 A;  1DRS A;  4BDT B;  1IK8 A;  1CTX A;  4FAO C;  1F94 A;  1IDH A;  2MJ0 A;  2LA1 A;  4ZQY A;  2ABX A;  3NH7 A;  1REW C;  1RL5 A;  3ERA A;  1NOR A;  2HLQ A;  2QJB C;  1CDS A;  3EVS C;  1BTE A;  5DZ5 A;  1IKC A;  1VB0 A;  2H64 C;  1HC9 B;  2FD6 U;  4IYE A;  1ERG A;  5DU1 A;  2JQP A;  1QKE A;  3PLC A;  1LXG A;  1W6B A;  1CXN A;  1KU6 B;  1NEA A;  1IDG A;  2L5S A;  4FAO E;  3BT2 U;  3U74 U;  2L03 A;  2H62 D;  1COE A;  1KTZ B;  2PJY C;  2QJA C;  1ERA A;  4AEA A;  1ONJ A;  2NBT A;  3QB4 B;  3VTS A;  1CHV S;  1H0J A;  1XT3 A;  1CVO A;  1KS6 A;  2QC1 A;  2MHY A;  1RGJ A;  3EBX A;  1KBT A;  2CTX A;  4XJJ A;  2LCR A;  1LX5 B;  5DO6 A;  4BIK B;  1QM7 A;  1FRA A;  1KFH A;  1MAH F;  1CRE A;  4RUD A;  1NTX A;  1COD A;  1TGX A;  2MJY A;  1YWH A;  2X8B B;  1V6P A;  5IMT D;  1HAJ A;  1JBD A;  3NDS A;  1IDI A;  3HH7 A;  4OM4 A;  1CRF A;  1FAS A;  1F8U B;  1PLO A;  2BHI A;  2I9B E;  5IMY C;  1ES7 B;  2H7Z B;  2OFS A;  1CDQ A;  1KC4 A;  2CRS A;  4QTI U;  1UG4 A;  1ZAD A;  1KBS A;  3U73 U;  2QJ9 C;  1QKD A;  2GOO C;  1NTN A;  4LFT A;  2UX2 A;  1KL8 A;  5EBX A;  1M9Z A;  1FF4 A;  1NYU A;  2H64 B;  2J8B A;  4EY8 B;  4HQP F;  2ERA A;  2CCX A;  2MUO A;  2H62 C;  1IQ9 A;  1FSC A;  1HC9 A;  1LJZ A;  1TXB A;  3KFD I;  2MUP A;  6EBX A;  1L4W A;  2MFA A;  1TXA A;  1CXO A;  3BT1 U;  1HAA A;  4KSN A;  2BTX A;  2H7Z A;  2HLR A;  2PJY B;  1CDR A;  4P7U A;  1IDL A;  3KFD E;  2K3G A;  3NEQ A;  1LXH A;  1LSI A;  1NXB A;  1NYS A;  3FEV A;  1S4Y A;  1CDT A;  1FSS B;  1TFS A;  2CDX A;  1BXP A;  1MR6 A;  2JVE A;  4DO8 A;  2N99 A;  2H5F A;  1G6M A;  1JGK A; 
#chains in the Genus database with same CATH homology
 1CCQ A;  4OM5 A;  1CB9 A;  1KBA A;  1B41 B;  1KXI A;  1ABT A;  1HOY A;  1FFJ A;  3LAQ U;  2VLW A;  2MJ4 A;  2H8U A;  1JE9 A;  1IJC A;  2GOO B;  2UWR A;  2CRT A;  4UY2 C;  1I02 A;  1DRS A;  4BDT B;  1IK8 A;  1CTX A;  4FAO C;  1F94 A;  1IDH A;  2MJ0 A;  2LA1 A;  4ZQY A;  2ABX A;  3NH7 A;  1REW C;  1RL5 A;  3ERA A;  1NOR A;  2HLQ A;  2QJB C;  1CDS A;  3EVS C;  1BTE A;  5DZ5 A;  1IKC A;  1VB0 A;  2H64 C;  1HC9 B;  2FD6 U;  4IYE A;  1ERG A;  5DU1 A;  2JQP A;  1QKE A;  3PLC A;  1LXG A;  1W6B A;  1CXN A;  1KU6 B;  1NEA A;  1IDG A;  2L5S A;  4FAO E;  3BT2 U;  3U74 U;  2L03 A;  2H62 D;  1COE A;  1KTZ B;  2PJY C;  2QJA C;  1ERA A;  4AEA A;  1ONJ A;  2NBT A;  3QB4 B;  3VTS A;  1CHV S;  1H0J A;  1XT3 A;  1CVO A;  1KS6 A;  2QC1 A;  2MHY A;  1RGJ A;  3EBX A;  1KBT A;  2CTX A;  4XJJ A;  2LCR A;  1LX5 B;  5DO6 A;  4BIK B;  1QM7 A;  1FRA A;  1KFH A;  1MAH F;  1CRE A;  4RUD A;  1NTX A;  1COD A;  1TGX A;  2MJY A;  1YWH A;  2X8B B;  1V6P A;  5IMT D;  1HAJ A;  1JBD A;  3NDS A;  1IDI A;  3HH7 A;  4OM4 A;  1CRF A;  1FAS A;  1F8U B;  1PLO A;  2BHI A;  2I9B E;  5IMY C;  1ES7 B;  2H7Z B;  2OFS A;  1CDQ A;  1KC4 A;  2CRS A;  4QTI U;  1UG4 A;  1ZAD A;  1KBS A;  3U73 U;  2QJ9 C;  1QKD A;  2GOO C;  1NTN A;  4LFT A;  2UX2 A;  1KL8 A;  5EBX A;  1M9Z A;  1FF4 A;  1NYU A;  2H64 B;  2J8B A;  4EY8 B;  4HQP F;  2ERA A;  2CCX A;  2MUO A;  2H62 C;  1IQ9 A;  1FSC A;  1HC9 A;  1LJZ A;  1TXB A;  3KFD I;  2MUP A;  6EBX A;  1L4W A;  2MFA A;  1TXA A;  1CXO A;  3BT1 U;  1HAA A;  4KSN A;  2BTX A;  2H7Z A;  2HLR A;  2PJY B;  1CDR A;  4P7U A;  1IDL A;  3KFD E;  2K3G A;  3NEQ A;  1LXH A;  1LSI A;  1NXB A;  1NYS A;  3FEV A;  1S4Y A;  1CDT A;  1FSS B;  1TFS A;  2CDX A;  1BXP A;  1MR6 A;  2JVE A;  4DO8 A;  2N99 A;  2H5F A;  1G6M A;  1JGK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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