1TXAA

Solution nmr structure of toxin b, a long neurotoxin from the venom of the king cobra, minimized average structure
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
73
structure length
73
Chain Sequence
TKCYVTPDATSQTCPDGQDICYTKTWCDGFCSSRGKRIDLGCAATCPKVKPGVDIKCCSTDNCNPFPTWKRKH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Neurotoxin
molecule keywords TOXIN B
publication title Solution structure of toxin b, a long neurotoxin from the venom of the king cobra (Ophiophagus hannah).
pubmed doi rcsb
total genus 4
structure length 73
sequence length 73
ec nomenclature
pdb deposition date 1996-07-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1txaA00
1UG4A 4EY8B 2MJYA 1IDLA 1CCQA 1LXHA 2CRSA 2QJAC 1IDHA 2JVEA 2NBTA 3NH7A 1HAAA 1ONJA 2H7ZB 2H7ZA 1CREA 3BT1U 2CDXA 1MR6A 1IKCA 4HQPF 2MUPA 1RL5A 4OM5A 3FEVA 3U73U 2MFAA 1KBAA 1HOYA 1BTEA 1CTXA 1TXAA 2HLRA 3EVSC 3U74U 1CHVS 1KS6A 1I02A 1QKDA 1V6PA 5IMTD 2N99A 2ERAA 1LSIA 2K3GA 1QKEA 1IJCA 1FFJA 1TGXA 5IMYC 1RGJA 1HAJA 4XJJA 2H5FA 1NYUA 2MUOA 4UY2C 2HLQA 1CDRA 1FASA 1ES7B 4FAOC 1LX5B 1CRFA 3EBXA 1ABTA 2QJBC 1CXOA 2CCXA 1IQ9A 4FAOE 2LA1A 1NEAA 2CRTA 2UX2A 1W6BA 1KXIA 1COEA 1ZADA 1MAHF 1NORA 1CVOA 2CTXA 1KFHA 5DU1A 1TXBA 4DO8A 3ERAA 6EBXA 1CDQA 1FSCA 1LXGA 1S4YA 2GOOB 4BDTB 1CDTA 1F8UB 1FSSB 2VLWA 2MJ4A 1REWC 4ZQYA 5EBXA 1ERAA 1CB9A 1CXNA 2X8BB 2PJYB 2H62D 1FRAA 2L03A 1NTNA 1HC9B 1HC9A 4OM4A 2PJYC 3BT2U 1BXPA 2H8UA 1JGKA 1DRSA 5DO6A 1KTZB 1KL8A 1YWHA 1F94A 2JQPA 4IYEA 2FD6U 4P7UA 3QB4B 1IDGA 2MJ0A 3PLCA 2H64B 1M9ZA 1XT3A 1KBSA 2H62C 2UWRA 1KC4A 3NDSA 2BTXA 5DZ5A 4BIKB 1JBDA 1NXBA 1FF4A 2H64C 4AEAA 3VTSA 3LAQU 1L4WA 3KFDI 2L5SA 4LFTA 2OFSA 1ERGA 1G6MA 1PLOA 1QM7A 2GOOC 2I9BE 1JE9A 1KBTA 2LCRA 2QJ9C 3HH7A 1NTXA 3KFDE 4RUDA 2QC1A 2BHIA 1TFSA 1CDSA 1IDIA 4QTIU 1KU6B 1IK8A 1VB0A 1LJZA 2MHYA 1NYSA 2ABXA 1H0JA 1CODA 1B41B 2J8BA 3NEQA
chains in the Genus database with same CATH superfamily
1UG4A 4EY8B 2MJYA 1IDLA 1CCQA 1LXHA 2CRSA 2QJAC 1IDHA 2JVEA 2NBTA 3NH7A 1HAAA 1ONJA 2H7ZB 2H7ZA 1CREA 3BT1U 2CDXA 1MR6A 1IKCA 4HQPF 2MUPA 1RL5A 4OM5A 3FEVA 3U73U 2MFAA 1KBAA 1HOYA 1BTEA 1CTXA 1TXAA 2HLRA 3EVSC 3U74U 1CHVS 1KS6A 1I02A 1QKDA 1V6PA 5IMTD 2N99A 2ERAA 1LSIA 2K3GA 1QKEA 1IJCA 1FFJA 1TGXA 5IMYC 1RGJA 1HAJA 4XJJA 2H5FA 1NYUA 2MUOA 4UY2C 2HLQA 1CDRA 1FASA 1ES7B 4FAOC 1LX5B 1CRFA 3EBXA 1ABTA 2QJBC 1CXOA 2CCXA 1IQ9A 4FAOE 2LA1A 1NEAA 2CRTA 2UX2A 1W6BA 1KXIA 1COEA 1ZADA 1MAHF 1NORA 1CVOA 2CTXA 1KFHA 5DU1A 1TXBA 4DO8A 3ERAA 6EBXA 1CDQA 1FSCA 1LXGA 1S4YA 2GOOB 4BDTB 1CDTA 1F8UB 1FSSB 2VLWA 2MJ4A 1REWC 4ZQYA 5EBXA 1ERAA 1CB9A 1CXNA 2X8BB 2PJYB 2H62D 1FRAA 2L03A 1NTNA 1HC9B 1HC9A 4OM4A 2PJYC 3BT2U 1BXPA 2H8UA 1JGKA 1DRSA 5DO6A 1KTZB 1KL8A 1YWHA 1F94A 2JQPA 4IYEA 2FD6U 4P7UA 3QB4B 1IDGA 2MJ0A 3PLCA 2H64B 1M9ZA 1XT3A 1KBSA 2H62C 2UWRA 1KC4A 3NDSA 2BTXA 5DZ5A 4BIKB 1JBDA 1NXBA 1FF4A 2H64C 4AEAA 3VTSA 3LAQU 1L4WA 3KFDI 2L5SA 4LFTA 2OFSA 4KSNA 1ERGA 1G6MA 1PLOA 1QM7A 2GOOC 2I9BE 1JE9A 1KBTA 2LCRA 2QJ9C 3HH7A 1NTXA 3KFDE 4RUDA 2QC1A 2BHIA 1TFSA 1CDSA 1IDIA 4QTIU 1KU6B 1IK8A 1VB0A 1LJZA 2MHYA 1NYSA 2ABXA 1H0JA 1CODA 1B41B 2J8BA 3NEQA
chains in the Genus database with same CATH topology
1UG4A 4EY8B 2MJYA 1IDLA 1CCQA 1LXHA 2CRSA 2QJAC 1IDHA 2JVEA 2NBTA 3NH7A 1HAAA 1ONJA 2H7ZB 2H7ZA 1CREA 3BT1U 2CDXA 1MR6A 1IKCA 4HQPF 2MUPA 1RL5A 4OM5A 3FEVA 3U73U 2MFAA 1KBAA 1HOYA 1BTEA 1CTXA 1TXAA 2HLRA 3EVSC 3U74U 1CHVS 1KS6A 1I02A 1QKDA 1V6PA 5IMTD 2N99A 2ERAA 1LSIA 2K3GA 1QKEA 1IJCA 1FFJA 1TGXA 5IMYC 1RGJA 1HAJA 4XJJA 2H5FA 1NYUA 2MUOA 4UY2C 2HLQA 1CDRA 1FASA 1ES7B 4FAOC 1LX5B 1CRFA 3EBXA 1ABTA 2QJBC 1CXOA 2CCXA 1IQ9A 4FAOE 2LA1A 1NEAA 2CRTA 2UX2A 1W6BA 1KXIA 1COEA 1ZADA 1MAHF 1NORA 1CVOA 2CTXA 1KFHA 5DU1A 1TXBA 4DO8A 3ERAA 6EBXA 1CDQA 1FSCA 1LXGA 1S4YA 2GOOB 4BDTB 1CDTA 1F8UB 1FSSB 2VLWA 2MJ4A 1REWC 4ZQYA 5EBXA 1ERAA 1CB9A 1CXNA 2X8BB 2PJYB 2H62D 1FRAA 2L03A 1NTNA 1HC9B 1HC9A 4OM4A 2PJYC 3BT2U 1BXPA 2H8UA 1JGKA 1DRSA 5DO6A 1KTZB 1KL8A 1YWHA 1F94A 2JQPA 4IYEA 2FD6U 4P7UA 3QB4B 1IDGA 2MJ0A 3PLCA 2H64B 1M9ZA 1XT3A 1KBSA 2H62C 2UWRA 1KC4A 3NDSA 2BTXA 5DZ5A 4BIKB 1JBDA 1NXBA 1FF4A 2H64C 4AEAA 3VTSA 3LAQU 1L4WA 3KFDI 2L5SA 4LFTA 2OFSA 4KSNA 1ERGA 1G6MA 1PLOA 1QM7A 2GOOC 2I9BE 1JE9A 1KBTA 2LCRA 2QJ9C 3HH7A 1NTXA 3KFDE 4RUDA 2QC1A 2BHIA 1TFSA 1CDSA 1IDIA 4QTIU 1KU6B 1IK8A 1VB0A 1LJZA 2MHYA 1NYSA 2ABXA 1H0JA 1CODA 1B41B 2J8BA 3NEQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1UG4 A;  4EY8 B;  2MJY A;  1IDL A;  1CCQ A;  1LXH A;  2CRS A;  2QJA C;  1IDH A;  2JVE A;  2NBT A;  3NH7 A;  1HAA A;  1ONJ A;  2H7Z B;  2H7Z A;  1CRE A;  3BT1 U;  2CDX A;  1MR6 A;  1IKC A;  4HQP F;  2MUP A;  1RL5 A;  4OM5 A;  3FEV A;  3U73 U;  2MFA A;  1KBA A;  1HOY A;  1BTE A;  1CTX A;  1TXA A;  2HLR A;  3EVS C;  3U74 U;  1CHV S;  1KS6 A;  1I02 A;  1QKD A;  1V6P A;  5IMT D;  2N99 A;  2ERA A;  1LSI A;  2K3G A;  1QKE A;  1IJC A;  1FFJ A;  1TGX A;  5IMY C;  1RGJ A;  1HAJ A;  4XJJ A;  2H5F A;  1NYU A;  2MUO A;  4UY2 C;  2HLQ A;  1CDR A;  1FAS A;  1ES7 B;  4FAO C;  1LX5 B;  1CRF A;  3EBX A;  1ABT A;  2QJB C;  1CXO A;  2CCX A;  1IQ9 A;  4FAO E;  2LA1 A;  1NEA A;  2CRT A;  2UX2 A;  1W6B A;  1KXI A;  1COE A;  1ZAD A;  1MAH F;  1NOR A;  1CVO A;  2CTX A;  1KFH A;  5DU1 A;  1TXB A;  4DO8 A;  3ERA A;  6EBX A;  1CDQ A;  1FSC A;  1LXG A;  1S4Y A;  2GOO B;  4BDT B;  1CDT A;  1F8U B;  1FSS B;  2VLW A;  2MJ4 A;  1REW C;  4ZQY A;  5EBX A;  1ERA A;  1CB9 A;  1CXN A;  2X8B B;  2PJY B;  2H62 D;  1FRA A;  2L03 A;  1NTN A;  1HC9 B;  1HC9 A;  4OM4 A;  2PJY C;  3BT2 U;  1BXP A;  2H8U A;  1JGK A;  1DRS A;  5DO6 A;  1KTZ B;  1KL8 A;  1YWH A;  1F94 A;  2JQP A;  4IYE A;  2FD6 U;  4P7U A;  3QB4 B;  1IDG A;  2MJ0 A;  3PLC A;  2H64 B;  1M9Z A;  1XT3 A;  1KBS A;  2H62 C;  2UWR A;  1KC4 A;  3NDS A;  2BTX A;  5DZ5 A;  4BIK B;  1JBD A;  1NXB A;  1FF4 A;  2H64 C;  4AEA A;  3VTS A;  3LAQ U;  1L4W A;  3KFD I;  2L5S A;  4LFT A;  2OFS A;  1ERG A;  1G6M A;  1PLO A;  1QM7 A;  2GOO C;  2I9B E;  1JE9 A;  1KBT A;  2LCR A;  2QJ9 C;  3HH7 A;  1NTX A;  3KFD E;  4RUD A;  2QC1 A;  2BHI A;  1TFS A;  1CDS A;  1IDI A;  4QTI U;  1KU6 B;  1IK8 A;  1VB0 A;  1LJZ A;  2MHY A;  1NYS A;  2ABX A;  1H0J A;  1COD A;  1B41 B;  2J8B A;  3NEQ A; 
#chains in the Genus database with same CATH topology
 1UG4 A;  4EY8 B;  2MJY A;  1IDL A;  1CCQ A;  1LXH A;  2CRS A;  2QJA C;  1IDH A;  2JVE A;  2NBT A;  3NH7 A;  1HAA A;  1ONJ A;  2H7Z B;  2H7Z A;  1CRE A;  3BT1 U;  2CDX A;  1MR6 A;  1IKC A;  4HQP F;  2MUP A;  1RL5 A;  4OM5 A;  3FEV A;  3U73 U;  2MFA A;  1KBA A;  1HOY A;  1BTE A;  1CTX A;  1TXA A;  2HLR A;  3EVS C;  3U74 U;  1CHV S;  1KS6 A;  1I02 A;  1QKD A;  1V6P A;  5IMT D;  2N99 A;  2ERA A;  1LSI A;  2K3G A;  1QKE A;  1IJC A;  1FFJ A;  1TGX A;  5IMY C;  1RGJ A;  1HAJ A;  4XJJ A;  2H5F A;  1NYU A;  2MUO A;  4UY2 C;  2HLQ A;  1CDR A;  1FAS A;  1ES7 B;  4FAO C;  1LX5 B;  1CRF A;  3EBX A;  1ABT A;  2QJB C;  1CXO A;  2CCX A;  1IQ9 A;  4FAO E;  2LA1 A;  1NEA A;  2CRT A;  2UX2 A;  1W6B A;  1KXI A;  1COE A;  1ZAD A;  1MAH F;  1NOR A;  1CVO A;  2CTX A;  1KFH A;  5DU1 A;  1TXB A;  4DO8 A;  3ERA A;  6EBX A;  1CDQ A;  1FSC A;  1LXG A;  1S4Y A;  2GOO B;  4BDT B;  1CDT A;  1F8U B;  1FSS B;  2VLW A;  2MJ4 A;  1REW C;  4ZQY A;  5EBX A;  1ERA A;  1CB9 A;  1CXN A;  2X8B B;  2PJY B;  2H62 D;  1FRA A;  2L03 A;  1NTN A;  1HC9 B;  1HC9 A;  4OM4 A;  2PJY C;  3BT2 U;  1BXP A;  2H8U A;  1JGK A;  1DRS A;  5DO6 A;  1KTZ B;  1KL8 A;  1YWH A;  1F94 A;  2JQP A;  4IYE A;  2FD6 U;  4P7U A;  3QB4 B;  1IDG A;  2MJ0 A;  3PLC A;  2H64 B;  1M9Z A;  1XT3 A;  1KBS A;  2H62 C;  2UWR A;  1KC4 A;  3NDS A;  2BTX A;  5DZ5 A;  4BIK B;  1JBD A;  1NXB A;  1FF4 A;  2H64 C;  4AEA A;  3VTS A;  3LAQ U;  1L4W A;  3KFD I;  2L5S A;  4LFT A;  2OFS A;  4KSN A;  1ERG A;  1G6M A;  1PLO A;  1QM7 A;  2GOO C;  2I9B E;  1JE9 A;  1KBT A;  2LCR A;  2QJ9 C;  3HH7 A;  1NTX A;  3KFD E;  4RUD A;  2QC1 A;  2BHI A;  1TFS A;  1CDS A;  1IDI A;  4QTI U;  1KU6 B;  1IK8 A;  1VB0 A;  1LJZ A;  2MHY A;  1NYS A;  2ABX A;  1H0J A;  1COD A;  1B41 B;  2J8B A;  3NEQ A; 
#chains in the Genus database with same CATH homology
 1UG4 A;  4EY8 B;  2MJY A;  1IDL A;  1CCQ A;  1LXH A;  2CRS A;  2QJA C;  1IDH A;  2JVE A;  2NBT A;  3NH7 A;  1HAA A;  1ONJ A;  2H7Z B;  2H7Z A;  1CRE A;  3BT1 U;  2CDX A;  1MR6 A;  1IKC A;  4HQP F;  2MUP A;  1RL5 A;  4OM5 A;  3FEV A;  3U73 U;  2MFA A;  1KBA A;  1HOY A;  1BTE A;  1CTX A;  1TXA A;  2HLR A;  3EVS C;  3U74 U;  1CHV S;  1KS6 A;  1I02 A;  1QKD A;  1V6P A;  5IMT D;  2N99 A;  2ERA A;  1LSI A;  2K3G A;  1QKE A;  1IJC A;  1FFJ A;  1TGX A;  5IMY C;  1RGJ A;  1HAJ A;  4XJJ A;  2H5F A;  1NYU A;  2MUO A;  4UY2 C;  2HLQ A;  1CDR A;  1FAS A;  1ES7 B;  4FAO C;  1LX5 B;  1CRF A;  3EBX A;  1ABT A;  2QJB C;  1CXO A;  2CCX A;  1IQ9 A;  4FAO E;  2LA1 A;  1NEA A;  2CRT A;  2UX2 A;  1W6B A;  1KXI A;  1COE A;  1ZAD A;  1MAH F;  1NOR A;  1CVO A;  2CTX A;  1KFH A;  5DU1 A;  1TXB A;  4DO8 A;  3ERA A;  6EBX A;  1CDQ A;  1FSC A;  1LXG A;  1S4Y A;  2GOO B;  4BDT B;  1CDT A;  1F8U B;  1FSS B;  2VLW A;  2MJ4 A;  1REW C;  4ZQY A;  5EBX A;  1ERA A;  1CB9 A;  1CXN A;  2X8B B;  2PJY B;  2H62 D;  1FRA A;  2L03 A;  1NTN A;  1HC9 B;  1HC9 A;  4OM4 A;  2PJY C;  3BT2 U;  1BXP A;  2H8U A;  1JGK A;  1DRS A;  5DO6 A;  1KTZ B;  1KL8 A;  1YWH A;  1F94 A;  2JQP A;  4IYE A;  2FD6 U;  4P7U A;  3QB4 B;  1IDG A;  2MJ0 A;  3PLC A;  2H64 B;  1M9Z A;  1XT3 A;  1KBS A;  2H62 C;  2UWR A;  1KC4 A;  3NDS A;  2BTX A;  5DZ5 A;  4BIK B;  1JBD A;  1NXB A;  1FF4 A;  2H64 C;  4AEA A;  3VTS A;  3LAQ U;  1L4W A;  3KFD I;  2L5S A;  4LFT A;  2OFS A;  4KSN A;  1ERG A;  1G6M A;  1PLO A;  1QM7 A;  2GOO C;  2I9B E;  1JE9 A;  1KBT A;  2LCR A;  2QJ9 C;  3HH7 A;  1NTX A;  3KFD E;  4RUD A;  2QC1 A;  2BHI A;  1TFS A;  1CDS A;  1IDI A;  4QTI U;  1KU6 B;  1IK8 A;  1VB0 A;  1LJZ A;  2MHY A;  1NYS A;  2ABX A;  1H0J A;  1COD A;  1B41 B;  2J8B A;  3NEQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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