1LJZA

Nmr structure of an achr-peptide (torpedo californica, alpha-subunit residues 182-202) in complex with alpha-bungarotoxin
Total Genus 9
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
74
structure length
74
Chain Sequence
IVCHTTATSPISAVTCPPGENLCYRKMWCDAFCSSRGKVVELGCAATCPSKKPYEEVTCCSTDKCNPHPKQRPG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The mechanism for acetylcholine receptor inhibition by alpha-neurotoxins and species-specific resistance to alpha-bungarotoxin revealed by NMR.
pubmed doi rcsb
molecule keywords alpha-Bungarotoxin
molecule tags Receptor, toxin
total genus 9
structure length 74
sequence length 74
ec nomenclature
pdb deposition date 2002-04-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00087 Toxin_TOLIP Snake toxin and toxin-like protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1ljzA00
1HC9B 1CXNA 1RGJA 1LSIA 2H62D 2BHIA 4LFTA 3U74U 1NEAA 2NBTA 1FASA 1LJZA 1F8UB 1TFSA 2OFSA 4BDTB 1KBTA 2X8BB 1JGKA 1ABTA 2UWRA 2LA1A 3LAQU 6EBXA 1G6MA 1JBDA 1TXAA 1HAJA 1FRAA 1CVOA 1KTZB 5DZ5A 4FAOE 1JE9A 1FFJA 4P7UA 1CTXA 1TGXA 2MFAA 2MJ0A 1ERGA 5DO6A 2MJ4A 1CDQA 2H5FA 4DO8A 1YWHA 1LXHA 1BXPA 1CDSA 1IK8A 1RL5A 2PJYB 2ERAA 4IYEA 5IMTD 1KFHA 2HLRA 3ERAA 4XJJA 1B41B 1CXOA 2CTXA 1CDTA 1FSCA 4RUDA 1IDGA 1KL8A 2MUPA 2MJYA 3EVSC 1IDHA 1MR6A 3EBXA 1KBAA 2MHYA 1XT3A 2CRSA 5EBXA 1NTXA 2LCRA 4OM4A 1ZADA 2H7ZB 1KC4A 4FAOC 2J8BA 1HAAA 3BT1U 2QJ9C 1HOYA 1NXBA 1KBSA 3KFDI 1QKEA 1CCQA 4OM5A 3FEVA 1TXBA 1BTEA 3QB4B 1V6PA 1FF4A 1ERAA 2H8UA 1MAHF 1IDLA 2QJAC 2CDXA 1S4YA 4AEAA 4QTIU 1CREA 1CHVS 3VTSA 2H64C 1LX5B 2QJBC 3HH7A 4EY8B 1IKCA 1I02A 1FSSB 1PLOA 2BTXA 1NORA 1CDRA 2ABXA 1NYUA 3NEQA 1KU6B 3U73U 2H62C 3BT2U 2MUOA 4UY2C 5DU1A 4BIKB 2JVEA 2FD6U 1HC9A 2L5SA 3NH7A 4ZQYA 1KXIA 1ONJA 1NYSA 2CCXA 2CRTA 5IMYC 1IJCA 1CODA 2I9BE 1W6BA 3KFDE 1QM7A 1CB9A 1F94A 4HQPF 1UG4A 2HLQA 1H0JA 2UX2A 1IDIA 1LXGA 1ES7B 2JQPA 1COEA 1DRSA 1REWC 2QC1A 1VB0A 2H7ZA 2H64B 2GOOC 1IQ9A 3NDSA 1KS6A 1L4WA 2GOOB 1M9ZA 3PLCA 2VLWA 2N99A 2L03A 2PJYC 1CRFA 1NTNA 1QKDA 2K3GA
chains in the Genus database with same CATH superfamily
1HC9B 1CXNA 1RGJA 1LSIA 2H62D 2BHIA 4KSNA 4LFTA 3U74U 1NEAA 2NBTA 1FASA 1LJZA 1F8UB 1TFSA 2OFSA 4BDTB 1KBTA 2X8BB 1JGKA 1ABTA 2UWRA 2LA1A 3LAQU 6EBXA 1G6MA 1JBDA 1TXAA 1HAJA 1FRAA 1CVOA 1KTZB 5DZ5A 4FAOE 1JE9A 1FFJA 4P7UA 1CTXA 1TGXA 2MFAA 2MJ0A 1ERGA 5DO6A 2MJ4A 1CDQA 2H5FA 4DO8A 1YWHA 1LXHA 1BXPA 1CDSA 1IK8A 1RL5A 2PJYB 2ERAA 4IYEA 5IMTD 1KFHA 2HLRA 3ERAA 4XJJA 1B41B 1CXOA 2CTXA 1CDTA 1FSCA 4RUDA 1IDGA 1KL8A 2MUPA 2MJYA 3EVSC 1IDHA 1MR6A 3EBXA 1KBAA 2MHYA 1XT3A 2CRSA 5EBXA 1NTXA 2LCRA 4OM4A 1ZADA 2H7ZB 1KC4A 4FAOC 2J8BA 1HAAA 3BT1U 2QJ9C 1HOYA 1NXBA 1KBSA 3KFDI 1QKEA 1CCQA 4OM5A 3FEVA 1TXBA 1BTEA 3QB4B 1V6PA 1FF4A 1ERAA 2H8UA 1MAHF 1IDLA 2QJAC 2CDXA 1S4YA 4AEAA 4QTIU 1CREA 1CHVS 3VTSA 2H64C 1LX5B 2QJBC 3HH7A 4EY8B 1IKCA 1I02A 1FSSB 1PLOA 2BTXA 1NORA 1CDRA 2ABXA 1NYUA 3NEQA 1KU6B 3U73U 2H62C 3BT2U 2MUOA 4UY2C 5DU1A 4BIKB 2JVEA 2FD6U 1HC9A 2L5SA 3NH7A 4ZQYA 1KXIA 1ONJA 1NYSA 2CCXA 2CRTA 5IMYC 1IJCA 1CODA 2I9BE 1W6BA 3KFDE 1QM7A 1CB9A 1F94A 4HQPF 1UG4A 2HLQA 1H0JA 2UX2A 1IDIA 1LXGA 1ES7B 2JQPA 1COEA 1DRSA 1REWC 2QC1A 1VB0A 2H7ZA 2H64B 2GOOC 1IQ9A 3NDSA 1KS6A 1L4WA 2GOOB 1M9ZA 3PLCA 2VLWA 2N99A 2L03A 2PJYC 1CRFA 1NTNA 1QKDA 2K3GA
chains in the Genus database with same CATH topology
1HC9B 1CXNA 1RGJA 1LSIA 2H62D 2BHIA 4KSNA 4LFTA 3U74U 1NEAA 2NBTA 1FASA 1LJZA 1F8UB 1TFSA 2OFSA 4BDTB 1KBTA 2X8BB 1JGKA 1ABTA 2UWRA 2LA1A 3LAQU 6EBXA 1G6MA 1JBDA 1TXAA 1HAJA 1FRAA 1CVOA 1KTZB 5DZ5A 4FAOE 1JE9A 1FFJA 4P7UA 1CTXA 1TGXA 2MFAA 2MJ0A 1ERGA 5DO6A 2MJ4A 1CDQA 2H5FA 4DO8A 1YWHA 1LXHA 1BXPA 1CDSA 1IK8A 1RL5A 2PJYB 2ERAA 4IYEA 5IMTD 1KFHA 2HLRA 3ERAA 4XJJA 1B41B 1CXOA 2CTXA 1CDTA 1FSCA 4RUDA 1IDGA 1KL8A 2MUPA 2MJYA 3EVSC 1IDHA 1MR6A 3EBXA 1KBAA 2MHYA 1XT3A 2CRSA 5EBXA 1NTXA 2LCRA 4OM4A 1ZADA 2H7ZB 1KC4A 4FAOC 2J8BA 1HAAA 3BT1U 2QJ9C 1HOYA 1NXBA 1KBSA 3KFDI 1QKEA 1CCQA 4OM5A 3FEVA 1TXBA 1BTEA 3QB4B 1V6PA 1FF4A 1ERAA 2H8UA 1MAHF 1IDLA 2QJAC 2CDXA 1S4YA 4AEAA 4QTIU 1CREA 1CHVS 3VTSA 2H64C 1LX5B 2QJBC 3HH7A 4EY8B 1IKCA 1I02A 1FSSB 1PLOA 2BTXA 1NORA 1CDRA 2ABXA 1NYUA 3NEQA 1KU6B 3U73U 2H62C 3BT2U 2MUOA 4UY2C 5DU1A 4BIKB 2JVEA 2FD6U 1HC9A 2L5SA 3NH7A 4ZQYA 1KXIA 1ONJA 1NYSA 2CCXA 2CRTA 5IMYC 1IJCA 1CODA 2I9BE 1W6BA 3KFDE 1QM7A 1CB9A 1F94A 4HQPF 1UG4A 2HLQA 1H0JA 2UX2A 1IDIA 1LXGA 1ES7B 2JQPA 1COEA 1DRSA 1REWC 2QC1A 1VB0A 2H7ZA 2H64B 2GOOC 1IQ9A 3NDSA 1KS6A 1L4WA 2GOOB 1M9ZA 3PLCA 2VLWA 2N99A 2L03A 2PJYC 1CRFA 1NTNA 1QKDA 2K3GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1HC9 B;  1CXN A;  1RGJ A;  1LSI A;  2H62 D;  2BHI A;  4LFT A;  3U74 U;  1NEA A;  2NBT A;  1FAS A;  1LJZ A;  1F8U B;  1TFS A;  2OFS A;  4BDT B;  1KBT A;  2X8B B;  1JGK A;  1ABT A;  2UWR A;  2LA1 A;  3LAQ U;  6EBX A;  1G6M A;  1JBD A;  1TXA A;  1HAJ A;  1FRA A;  1CVO A;  1KTZ B;  5DZ5 A;  4FAO E;  1JE9 A;  1FFJ A;  4P7U A;  1CTX A;  1TGX A;  2MFA A;  2MJ0 A;  1ERG A;  5DO6 A;  2MJ4 A;  1CDQ A;  2H5F A;  4DO8 A;  1YWH A;  1LXH A;  1BXP A;  1CDS A;  1IK8 A;  1RL5 A;  2PJY B;  2ERA A;  4IYE A;  5IMT D;  1KFH A;  2HLR A;  3ERA A;  4XJJ A;  1B41 B;  1CXO A;  2CTX A;  1CDT A;  1FSC A;  4RUD A;  1IDG A;  1KL8 A;  2MUP A;  2MJY A;  3EVS C;  1IDH A;  1MR6 A;  3EBX A;  1KBA A;  2MHY A;  1XT3 A;  2CRS A;  5EBX A;  1NTX A;  2LCR A;  4OM4 A;  1ZAD A;  2H7Z B;  1KC4 A;  4FAO C;  2J8B A;  1HAA A;  3BT1 U;  2QJ9 C;  1HOY A;  1NXB A;  1KBS A;  3KFD I;  1QKE A;  1CCQ A;  4OM5 A;  3FEV A;  1TXB A;  1BTE A;  3QB4 B;  1V6P A;  1FF4 A;  1ERA A;  2H8U A;  1MAH F;  1IDL A;  2QJA C;  2CDX A;  1S4Y A;  4AEA A;  4QTI U;  1CRE A;  1CHV S;  3VTS A;  2H64 C;  1LX5 B;  2QJB C;  3HH7 A;  4EY8 B;  1IKC A;  1I02 A;  1FSS B;  1PLO A;  2BTX A;  1NOR A;  1CDR A;  2ABX A;  1NYU A;  3NEQ A;  1KU6 B;  3U73 U;  2H62 C;  3BT2 U;  2MUO A;  4UY2 C;  5DU1 A;  4BIK B;  2JVE A;  2FD6 U;  1HC9 A;  2L5S A;  3NH7 A;  4ZQY A;  1KXI A;  1ONJ A;  1NYS A;  2CCX A;  2CRT A;  5IMY C;  1IJC A;  1COD A;  2I9B E;  1W6B A;  3KFD E;  1QM7 A;  1CB9 A;  1F94 A;  4HQP F;  1UG4 A;  2HLQ A;  1H0J A;  2UX2 A;  1IDI A;  1LXG A;  1ES7 B;  2JQP A;  1COE A;  1DRS A;  1REW C;  2QC1 A;  1VB0 A;  2H7Z A;  2H64 B;  2GOO C;  1IQ9 A;  3NDS A;  1KS6 A;  1L4W A;  2GOO B;  1M9Z A;  3PLC A;  2VLW A;  2N99 A;  2L03 A;  2PJY C;  1CRF A;  1NTN A;  1QKD A;  2K3G A; 
#chains in the Genus database with same CATH topology
 1HC9 B;  1CXN A;  1RGJ A;  1LSI A;  2H62 D;  2BHI A;  4KSN A;  4LFT A;  3U74 U;  1NEA A;  2NBT A;  1FAS A;  1LJZ A;  1F8U B;  1TFS A;  2OFS A;  4BDT B;  1KBT A;  2X8B B;  1JGK A;  1ABT A;  2UWR A;  2LA1 A;  3LAQ U;  6EBX A;  1G6M A;  1JBD A;  1TXA A;  1HAJ A;  1FRA A;  1CVO A;  1KTZ B;  5DZ5 A;  4FAO E;  1JE9 A;  1FFJ A;  4P7U A;  1CTX A;  1TGX A;  2MFA A;  2MJ0 A;  1ERG A;  5DO6 A;  2MJ4 A;  1CDQ A;  2H5F A;  4DO8 A;  1YWH A;  1LXH A;  1BXP A;  1CDS A;  1IK8 A;  1RL5 A;  2PJY B;  2ERA A;  4IYE A;  5IMT D;  1KFH A;  2HLR A;  3ERA A;  4XJJ A;  1B41 B;  1CXO A;  2CTX A;  1CDT A;  1FSC A;  4RUD A;  1IDG A;  1KL8 A;  2MUP A;  2MJY A;  3EVS C;  1IDH A;  1MR6 A;  3EBX A;  1KBA A;  2MHY A;  1XT3 A;  2CRS A;  5EBX A;  1NTX A;  2LCR A;  4OM4 A;  1ZAD A;  2H7Z B;  1KC4 A;  4FAO C;  2J8B A;  1HAA A;  3BT1 U;  2QJ9 C;  1HOY A;  1NXB A;  1KBS A;  3KFD I;  1QKE A;  1CCQ A;  4OM5 A;  3FEV A;  1TXB A;  1BTE A;  3QB4 B;  1V6P A;  1FF4 A;  1ERA A;  2H8U A;  1MAH F;  1IDL A;  2QJA C;  2CDX A;  1S4Y A;  4AEA A;  4QTI U;  1CRE A;  1CHV S;  3VTS A;  2H64 C;  1LX5 B;  2QJB C;  3HH7 A;  4EY8 B;  1IKC A;  1I02 A;  1FSS B;  1PLO A;  2BTX A;  1NOR A;  1CDR A;  2ABX A;  1NYU A;  3NEQ A;  1KU6 B;  3U73 U;  2H62 C;  3BT2 U;  2MUO A;  4UY2 C;  5DU1 A;  4BIK B;  2JVE A;  2FD6 U;  1HC9 A;  2L5S A;  3NH7 A;  4ZQY A;  1KXI A;  1ONJ A;  1NYS A;  2CCX A;  2CRT A;  5IMY C;  1IJC A;  1COD A;  2I9B E;  1W6B A;  3KFD E;  1QM7 A;  1CB9 A;  1F94 A;  4HQP F;  1UG4 A;  2HLQ A;  1H0J A;  2UX2 A;  1IDI A;  1LXG A;  1ES7 B;  2JQP A;  1COE A;  1DRS A;  1REW C;  2QC1 A;  1VB0 A;  2H7Z A;  2H64 B;  2GOO C;  1IQ9 A;  3NDS A;  1KS6 A;  1L4W A;  2GOO B;  1M9Z A;  3PLC A;  2VLW A;  2N99 A;  2L03 A;  2PJY C;  1CRF A;  1NTN A;  1QKD A;  2K3G A; 
#chains in the Genus database with same CATH homology
 1HC9 B;  1CXN A;  1RGJ A;  1LSI A;  2H62 D;  2BHI A;  4KSN A;  4LFT A;  3U74 U;  1NEA A;  2NBT A;  1FAS A;  1LJZ A;  1F8U B;  1TFS A;  2OFS A;  4BDT B;  1KBT A;  2X8B B;  1JGK A;  1ABT A;  2UWR A;  2LA1 A;  3LAQ U;  6EBX A;  1G6M A;  1JBD A;  1TXA A;  1HAJ A;  1FRA A;  1CVO A;  1KTZ B;  5DZ5 A;  4FAO E;  1JE9 A;  1FFJ A;  4P7U A;  1CTX A;  1TGX A;  2MFA A;  2MJ0 A;  1ERG A;  5DO6 A;  2MJ4 A;  1CDQ A;  2H5F A;  4DO8 A;  1YWH A;  1LXH A;  1BXP A;  1CDS A;  1IK8 A;  1RL5 A;  2PJY B;  2ERA A;  4IYE A;  5IMT D;  1KFH A;  2HLR A;  3ERA A;  4XJJ A;  1B41 B;  1CXO A;  2CTX A;  1CDT A;  1FSC A;  4RUD A;  1IDG A;  1KL8 A;  2MUP A;  2MJY A;  3EVS C;  1IDH A;  1MR6 A;  3EBX A;  1KBA A;  2MHY A;  1XT3 A;  2CRS A;  5EBX A;  1NTX A;  2LCR A;  4OM4 A;  1ZAD A;  2H7Z B;  1KC4 A;  4FAO C;  2J8B A;  1HAA A;  3BT1 U;  2QJ9 C;  1HOY A;  1NXB A;  1KBS A;  3KFD I;  1QKE A;  1CCQ A;  4OM5 A;  3FEV A;  1TXB A;  1BTE A;  3QB4 B;  1V6P A;  1FF4 A;  1ERA A;  2H8U A;  1MAH F;  1IDL A;  2QJA C;  2CDX A;  1S4Y A;  4AEA A;  4QTI U;  1CRE A;  1CHV S;  3VTS A;  2H64 C;  1LX5 B;  2QJB C;  3HH7 A;  4EY8 B;  1IKC A;  1I02 A;  1FSS B;  1PLO A;  2BTX A;  1NOR A;  1CDR A;  2ABX A;  1NYU A;  3NEQ A;  1KU6 B;  3U73 U;  2H62 C;  3BT2 U;  2MUO A;  4UY2 C;  5DU1 A;  4BIK B;  2JVE A;  2FD6 U;  1HC9 A;  2L5S A;  3NH7 A;  4ZQY A;  1KXI A;  1ONJ A;  1NYS A;  2CCX A;  2CRT A;  5IMY C;  1IJC A;  1COD A;  2I9B E;  1W6B A;  3KFD E;  1QM7 A;  1CB9 A;  1F94 A;  4HQP F;  1UG4 A;  2HLQ A;  1H0J A;  2UX2 A;  1IDI A;  1LXG A;  1ES7 B;  2JQP A;  1COE A;  1DRS A;  1REW C;  2QC1 A;  1VB0 A;  2H7Z A;  2H64 B;  2GOO C;  1IQ9 A;  3NDS A;  1KS6 A;  1L4W A;  2GOO B;  1M9Z A;  3PLC A;  2VLW A;  2N99 A;  2L03 A;  2PJY C;  1CRF A;  1NTN A;  1QKD A;  2K3G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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