1KS6A

Transforming growth factor beta type ii receptor ligand binding domain
Total Genus 10

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
10
sequence length
107
structure length
107
Chain Sequence
QLPRLCKFCDVKATTCSNQDQCTSNCNITSICEKNNEVCAAVWRRNDENVTLETICHDPQKRLYGHMLDDSSSEQCVMKEKKDDGGLMFMCSCTGEECNDVLIFSAI

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (32-35)S1 (5-7)S4 (39-46)TII3 (95-98)S3 (29-31)S2 (9-13)S5 (49-55)TVIII1 (19-22)TI'1 (63-66)TII1 (62-65)S6 (79-81)TIV3 (68-71)S7 (86-93)TVIII2 (73-76)TII2 (83-86)3H1 (98-100)O1 (17-19)Updating...
connected with : NaN
molecule tags Hormone/growth factor
source organism Gallus gallus
publication title Solution structure of the chick TGFb type II receptor ligand binding domain
pubmed doi rcsb
molecule keywords TRANSFORMING GROWTH FACTOR BETA TYPE II RECEPTOR
total genus 10
structure length 107
sequence length 107
ec nomenclature ec 2.7.11.30: Receptor protein serine/threonine kinase.
pdb deposition date 2002-01-10
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.60.10 Mainly Beta Ribbon CD59 CD59 1ks6A00
4OM5A 4EY8B 1TXBA 3LAQU 2N99A 1XT3A 2H7ZB 1S4YA 1NTXA 1HAAA 1W6BA 2PJYC 1HOYA 1UG4A 4XJJA 2MJYA 1NYUA 1RL5A 3HH7A 1HC9B 4FAOE 2QJAC 3U74U 1NEAA 3KFDI 4UY2C 3VTSA 4BIKB 1KC4A 1BTEA 1B41B 5DU1A 1KBAA 1LJZA 1TXAA 2FD6U 2HLRA 3QB4B 1I02A 1CREA 3ERAA 3NH7A 1ONJA 1REWC 1KL8A 1F8UB 1IDGA 2L5SA 1ES7B 1ZADA 3NEQA 1ABTA 1KU6B 5DZ5A 3BT2U 1IQ9A 1KTZB 1IJCA 1CVOA 1KFHA 2CRSA 1JE9A 2MHYA 2QJBC 1RGJA 2H64C 1IDHA 1CDTA 1LXHA 2ERAA 2PJYB 5EBXA 4OM4A 6EBXA 1DRSA 1KBSA 1KXIA 1QKEA 2MJ0A 3EVSC 1TGXA 1IK8A 2HLQA 4DO8A 2CRTA 1PLOA 2MFAA 2QJ9C 2UWRA 1CRFA 2CDXA 1CXNA 1BXPA 2GOOC 1JGKA 1TFSA 2NBTA 1QKDA 3KFDE 1FF4A 2OFSA 2LCRA 1CB9A 3FEVA 1FSCA 1ERGA 1HAJA 1CDSA 1NORA 1YWHA 1LSIA 4IYEA 1FASA 1CHVS 3NDSA 1L4WA 4LFTA 1CDRA 2BHIA 3U73U 2H64B 1F94A 1QM7A 1ERAA 4AEAA 1FSSB 1IDIA 1COEA 1LX5B 2I9BE 3BT1U 2H62C 1CCQA 1NYSA 1CXOA 1CTXA 1IKCA 2J8BA 5DO6A 1KS6A 1MR6A 2H62D 1HC9A 2GOOB 2X8BB 4HQPF 1FFJA 4FAOC 2L03A 1LXGA 2UX2A 1KBTA 1JBDA 2MUOA 4P7UA 2BTXA 2MJ4A 5IMYC 1H0JA 1M9ZA 2H8UA 1NXBA 1IDLA 2MUPA 1VB0A 1MAHF 2QC1A 1FRAA 4ZQYA 3EBXA 2JVEA 2CCXA 4QTIU 5IMTD 2JQPA 1V6PA 2CTXA 1CDQA 2ABXA 2H7ZA 1NTNA 3PLCA 2K3GA 4RUDA 2H5FA 2LA1A 1CODA 1G6MA 2VLWA 4BDTB
chains in the Genus database with same CATH superfamily
4OM5A 4EY8B 1TXBA 3LAQU 2N99A 1XT3A 2H7ZB 1S4YA 1NTXA 1HAAA 1W6BA 2PJYC 1HOYA 1UG4A 4XJJA 2MJYA 1NYUA 1RL5A 3HH7A 1HC9B 4FAOE 2QJAC 3U74U 1NEAA 3KFDI 4UY2C 3VTSA 4BIKB 1KC4A 1BTEA 1B41B 5DU1A 1KBAA 1LJZA 1TXAA 2FD6U 2HLRA 3QB4B 1I02A 1CREA 3ERAA 3NH7A 1ONJA 1REWC 1KL8A 1F8UB 1IDGA 2L5SA 1ES7B 1ZADA 3NEQA 1ABTA 1KU6B 5DZ5A 3BT2U 1IQ9A 1KTZB 1IJCA 1CVOA 1KFHA 2CRSA 1JE9A 2MHYA 4KSNA 2QJBC 1RGJA 2H64C 1IDHA 1CDTA 1LXHA 2ERAA 2PJYB 5EBXA 4OM4A 6EBXA 1DRSA 1KBSA 1KXIA 1QKEA 2MJ0A 3EVSC 1TGXA 1IK8A 2HLQA 4DO8A 2CRTA 1PLOA 2MFAA 2QJ9C 2UWRA 1CRFA 2CDXA 1CXNA 1BXPA 2GOOC 1JGKA 1TFSA 2NBTA 1QKDA 3KFDE 1FF4A 2OFSA 2LCRA 1CB9A 3FEVA 1FSCA 1ERGA 1HAJA 1CDSA 1NORA 1YWHA 1LSIA 4IYEA 1FASA 1CHVS 3NDSA 1L4WA 4LFTA 1CDRA 2BHIA 3U73U 2H64B 1F94A 1QM7A 1ERAA 4AEAA 1FSSB 1IDIA 1COEA 1LX5B 2I9BE 3BT1U 2H62C 1CCQA 1NYSA 1CXOA 1CTXA 1IKCA 2J8BA 5DO6A 1KS6A 1MR6A 2H62D 1HC9A 2GOOB 2X8BB 4HQPF 1FFJA 4FAOC 2L03A 1LXGA 2UX2A 1KBTA 1JBDA 2MUOA 4P7UA 2BTXA 2MJ4A 5IMYC 1H0JA 1M9ZA 2H8UA 1NXBA 1IDLA 2MUPA 1VB0A 1MAHF 2QC1A 1FRAA 4ZQYA 3EBXA 2JVEA 2CCXA 4QTIU 5IMTD 2JQPA 1V6PA 2CTXA 1CDQA 2ABXA 2H7ZA 1NTNA 3PLCA 2K3GA 4RUDA 2H5FA 2LA1A 1CODA 1G6MA 2VLWA 4BDTB
chains in the Genus database with same CATH topology
4OM5A 4EY8B 1TXBA 3LAQU 2N99A 1XT3A 2H7ZB 1S4YA 1NTXA 1HAAA 1W6BA 2PJYC 1HOYA 1UG4A 4XJJA 2MJYA 1NYUA 1RL5A 3HH7A 1HC9B 4FAOE 2QJAC 3U74U 1NEAA 3KFDI 4UY2C 3VTSA 4BIKB 1KC4A 1BTEA 1B41B 5DU1A 1KBAA 1LJZA 1TXAA 2FD6U 2HLRA 3QB4B 1I02A 1CREA 3ERAA 3NH7A 1ONJA 1REWC 1KL8A 1F8UB 1IDGA 2L5SA 1ES7B 1ZADA 3NEQA 1ABTA 1KU6B 5DZ5A 3BT2U 1IQ9A 1KTZB 1IJCA 1CVOA 1KFHA 2CRSA 1JE9A 2MHYA 4KSNA 2QJBC 1RGJA 2H64C 1IDHA 1CDTA 1LXHA 2ERAA 2PJYB 5EBXA 4OM4A 6EBXA 1DRSA 1KBSA 1KXIA 1QKEA 2MJ0A 3EVSC 1TGXA 1IK8A 2HLQA 4DO8A 2CRTA 1PLOA 2MFAA 2QJ9C 2UWRA 1CRFA 2CDXA 1CXNA 1BXPA 2GOOC 1JGKA 1TFSA 2NBTA 1QKDA 3KFDE 1FF4A 2OFSA 2LCRA 1CB9A 3FEVA 1FSCA 1ERGA 1HAJA 1CDSA 1NORA 1YWHA 1LSIA 4IYEA 1FASA 1CHVS 3NDSA 1L4WA 4LFTA 1CDRA 2BHIA 3U73U 2H64B 1F94A 1QM7A 1ERAA 4AEAA 1FSSB 1IDIA 1COEA 1LX5B 2I9BE 3BT1U 2H62C 1CCQA 1NYSA 1CXOA 1CTXA 1IKCA 2J8BA 5DO6A 1KS6A 1MR6A 2H62D 1HC9A 2GOOB 2X8BB 4HQPF 1FFJA 4FAOC 2L03A 1LXGA 2UX2A 1KBTA 1JBDA 2MUOA 4P7UA 2BTXA 2MJ4A 5IMYC 1H0JA 1M9ZA 2H8UA 1NXBA 1IDLA 2MUPA 1VB0A 1MAHF 2QC1A 1FRAA 4ZQYA 3EBXA 2JVEA 2CCXA 4QTIU 5IMTD 2JQPA 1V6PA 2CTXA 1CDQA 2ABXA 2H7ZA 1NTNA 3PLCA 2K3GA 4RUDA 2H5FA 2LA1A 1CODA 1G6MA 2VLWA 4BDTB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OM5 A;  4EY8 B;  1TXB A;  3LAQ U;  2N99 A;  1XT3 A;  2H7Z B;  1S4Y A;  1NTX A;  1HAA A;  1W6B A;  2PJY C;  1HOY A;  1UG4 A;  4XJJ A;  2MJY A;  1NYU A;  1RL5 A;  3HH7 A;  1HC9 B;  4FAO E;  2QJA C;  3U74 U;  1NEA A;  3KFD I;  4UY2 C;  3VTS A;  4BIK B;  1KC4 A;  1BTE A;  1B41 B;  5DU1 A;  1KBA A;  1LJZ A;  1TXA A;  2FD6 U;  2HLR A;  3QB4 B;  1I02 A;  1CRE A;  3ERA A;  3NH7 A;  1ONJ A;  1REW C;  1KL8 A;  1F8U B;  1IDG A;  2L5S A;  1ES7 B;  1ZAD A;  3NEQ A;  1ABT A;  1KU6 B;  5DZ5 A;  3BT2 U;  1IQ9 A;  1KTZ B;  1IJC A;  1CVO A;  1KFH A;  2CRS A;  1JE9 A;  2MHY A;  2QJB C;  1RGJ A;  2H64 C;  1IDH A;  1CDT A;  1LXH A;  2ERA A;  2PJY B;  5EBX A;  4OM4 A;  6EBX A;  1DRS A;  1KBS A;  1KXI A;  1QKE A;  2MJ0 A;  3EVS C;  1TGX A;  1IK8 A;  2HLQ A;  4DO8 A;  2CRT A;  1PLO A;  2MFA A;  2QJ9 C;  2UWR A;  1CRF A;  2CDX A;  1CXN A;  1BXP A;  2GOO C;  1JGK A;  1TFS A;  2NBT A;  1QKD A;  3KFD E;  1FF4 A;  2OFS A;  2LCR A;  1CB9 A;  3FEV A;  1FSC A;  1ERG A;  1HAJ A;  1CDS A;  1NOR A;  1YWH A;  1LSI A;  4IYE A;  1FAS A;  1CHV S;  3NDS A;  1L4W A;  4LFT A;  1CDR A;  2BHI A;  3U73 U;  2H64 B;  1F94 A;  1QM7 A;  1ERA A;  4AEA A;  1FSS B;  1IDI A;  1COE A;  1LX5 B;  2I9B E;  3BT1 U;  2H62 C;  1CCQ A;  1NYS A;  1CXO A;  1CTX A;  1IKC A;  2J8B A;  5DO6 A;  1KS6 A;  1MR6 A;  2H62 D;  1HC9 A;  2GOO B;  2X8B B;  4HQP F;  1FFJ A;  4FAO C;  2L03 A;  1LXG A;  2UX2 A;  1KBT A;  1JBD A;  2MUO A;  4P7U A;  2BTX A;  2MJ4 A;  5IMY C;  1H0J A;  1M9Z A;  2H8U A;  1NXB A;  1IDL A;  2MUP A;  1VB0 A;  1MAH F;  2QC1 A;  1FRA A;  4ZQY A;  3EBX A;  2JVE A;  2CCX A;  4QTI U;  5IMT D;  2JQP A;  1V6P A;  2CTX A;  1CDQ A;  2ABX A;  2H7Z A;  1NTN A;  3PLC A;  2K3G A;  4RUD A;  2H5F A;  2LA1 A;  1COD A;  1G6M A;  2VLW A;  4BDT B; 
#chains in the Genus database with same CATH topology
 4OM5 A;  4EY8 B;  1TXB A;  3LAQ U;  2N99 A;  1XT3 A;  2H7Z B;  1S4Y A;  1NTX A;  1HAA A;  1W6B A;  2PJY C;  1HOY A;  1UG4 A;  4XJJ A;  2MJY A;  1NYU A;  1RL5 A;  3HH7 A;  1HC9 B;  4FAO E;  2QJA C;  3U74 U;  1NEA A;  3KFD I;  4UY2 C;  3VTS A;  4BIK B;  1KC4 A;  1BTE A;  1B41 B;  5DU1 A;  1KBA A;  1LJZ A;  1TXA A;  2FD6 U;  2HLR A;  3QB4 B;  1I02 A;  1CRE A;  3ERA A;  3NH7 A;  1ONJ A;  1REW C;  1KL8 A;  1F8U B;  1IDG A;  2L5S A;  1ES7 B;  1ZAD A;  3NEQ A;  1ABT A;  1KU6 B;  5DZ5 A;  3BT2 U;  1IQ9 A;  1KTZ B;  1IJC A;  1CVO A;  1KFH A;  2CRS A;  1JE9 A;  2MHY A;  4KSN A;  2QJB C;  1RGJ A;  2H64 C;  1IDH A;  1CDT A;  1LXH A;  2ERA A;  2PJY B;  5EBX A;  4OM4 A;  6EBX A;  1DRS A;  1KBS A;  1KXI A;  1QKE A;  2MJ0 A;  3EVS C;  1TGX A;  1IK8 A;  2HLQ A;  4DO8 A;  2CRT A;  1PLO A;  2MFA A;  2QJ9 C;  2UWR A;  1CRF A;  2CDX A;  1CXN A;  1BXP A;  2GOO C;  1JGK A;  1TFS A;  2NBT A;  1QKD A;  3KFD E;  1FF4 A;  2OFS A;  2LCR A;  1CB9 A;  3FEV A;  1FSC A;  1ERG A;  1HAJ A;  1CDS A;  1NOR A;  1YWH A;  1LSI A;  4IYE A;  1FAS A;  1CHV S;  3NDS A;  1L4W A;  4LFT A;  1CDR A;  2BHI A;  3U73 U;  2H64 B;  1F94 A;  1QM7 A;  1ERA A;  4AEA A;  1FSS B;  1IDI A;  1COE A;  1LX5 B;  2I9B E;  3BT1 U;  2H62 C;  1CCQ A;  1NYS A;  1CXO A;  1CTX A;  1IKC A;  2J8B A;  5DO6 A;  1KS6 A;  1MR6 A;  2H62 D;  1HC9 A;  2GOO B;  2X8B B;  4HQP F;  1FFJ A;  4FAO C;  2L03 A;  1LXG A;  2UX2 A;  1KBT A;  1JBD A;  2MUO A;  4P7U A;  2BTX A;  2MJ4 A;  5IMY C;  1H0J A;  1M9Z A;  2H8U A;  1NXB A;  1IDL A;  2MUP A;  1VB0 A;  1MAH F;  2QC1 A;  1FRA A;  4ZQY A;  3EBX A;  2JVE A;  2CCX A;  4QTI U;  5IMT D;  2JQP A;  1V6P A;  2CTX A;  1CDQ A;  2ABX A;  2H7Z A;  1NTN A;  3PLC A;  2K3G A;  4RUD A;  2H5F A;  2LA1 A;  1COD A;  1G6M A;  2VLW A;  4BDT B; 
#chains in the Genus database with same CATH homology
 4OM5 A;  4EY8 B;  1TXB A;  3LAQ U;  2N99 A;  1XT3 A;  2H7Z B;  1S4Y A;  1NTX A;  1HAA A;  1W6B A;  2PJY C;  1HOY A;  1UG4 A;  4XJJ A;  2MJY A;  1NYU A;  1RL5 A;  3HH7 A;  1HC9 B;  4FAO E;  2QJA C;  3U74 U;  1NEA A;  3KFD I;  4UY2 C;  3VTS A;  4BIK B;  1KC4 A;  1BTE A;  1B41 B;  5DU1 A;  1KBA A;  1LJZ A;  1TXA A;  2FD6 U;  2HLR A;  3QB4 B;  1I02 A;  1CRE A;  3ERA A;  3NH7 A;  1ONJ A;  1REW C;  1KL8 A;  1F8U B;  1IDG A;  2L5S A;  1ES7 B;  1ZAD A;  3NEQ A;  1ABT A;  1KU6 B;  5DZ5 A;  3BT2 U;  1IQ9 A;  1KTZ B;  1IJC A;  1CVO A;  1KFH A;  2CRS A;  1JE9 A;  2MHY A;  4KSN A;  2QJB C;  1RGJ A;  2H64 C;  1IDH A;  1CDT A;  1LXH A;  2ERA A;  2PJY B;  5EBX A;  4OM4 A;  6EBX A;  1DRS A;  1KBS A;  1KXI A;  1QKE A;  2MJ0 A;  3EVS C;  1TGX A;  1IK8 A;  2HLQ A;  4DO8 A;  2CRT A;  1PLO A;  2MFA A;  2QJ9 C;  2UWR A;  1CRF A;  2CDX A;  1CXN A;  1BXP A;  2GOO C;  1JGK A;  1TFS A;  2NBT A;  1QKD A;  3KFD E;  1FF4 A;  2OFS A;  2LCR A;  1CB9 A;  3FEV A;  1FSC A;  1ERG A;  1HAJ A;  1CDS A;  1NOR A;  1YWH A;  1LSI A;  4IYE A;  1FAS A;  1CHV S;  3NDS A;  1L4W A;  4LFT A;  1CDR A;  2BHI A;  3U73 U;  2H64 B;  1F94 A;  1QM7 A;  1ERA A;  4AEA A;  1FSS B;  1IDI A;  1COE A;  1LX5 B;  2I9B E;  3BT1 U;  2H62 C;  1CCQ A;  1NYS A;  1CXO A;  1CTX A;  1IKC A;  2J8B A;  5DO6 A;  1KS6 A;  1MR6 A;  2H62 D;  1HC9 A;  2GOO B;  2X8B B;  4HQP F;  1FFJ A;  4FAO C;  2L03 A;  1LXG A;  2UX2 A;  1KBT A;  1JBD A;  2MUO A;  4P7U A;  2BTX A;  2MJ4 A;  5IMY C;  1H0J A;  1M9Z A;  2H8U A;  1NXB A;  1IDL A;  2MUP A;  1VB0 A;  1MAH F;  2QC1 A;  1FRA A;  4ZQY A;  3EBX A;  2JVE A;  2CCX A;  4QTI U;  5IMT D;  2JQP A;  1V6P A;  2CTX A;  1CDQ A;  2ABX A;  2H7Z A;  1NTN A;  3PLC A;  2K3G A;  4RUD A;  2H5F A;  2LA1 A;  1COD A;  1G6M A;  2VLW A;  4BDT B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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