4PV4A

Proline aminopeptidase p ii from yersinia pestis
Total Genus 158
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
436
structure length
436
Chain Sequence
MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILHYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTASVVKDPDDIEALMALN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Proline aminopeptidase P II from Yersinia pestis
rcsb
source organism Yersinia pestis
molecule tags Hydrolase
molecule keywords Proline aminopeptidase P II
total genus 158
structure length 436
sequence length 436
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2014-03-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4pv4A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4pv4A02
1YJ3A 2Q94A 1QXWA 3PKDA 1BOAA 1CHMA 4S01A 1R58A 4MATA 4U73A 4U6JA 1WBQA 1W7VA 2GG7A 3TB5A 2BWXA 5JI6A 1KQ0A 4HXXA 4PNCA 1WN1A 4QR8A 2OAZA 2BHDA 1BN5A 2BH3A 2MATA 4U69A 2Q96A 4FLLA 2BN7A 4B28A 3PEBA 1C24A 3BIPA 2BWWA 2OKNA 4PV4A 5E2CA 1R5GA 1B6AA 3RVAA 2BWTA 4R60A 1WKMA 2DFIA 2EVMA 2GA2A 3MX6A 2EVCA 2BHAA 1YW9A 2BHCA 1XGNA 3IU8A 3IU7A 2Q92A 2V3ZA 3QOCA 2BWUA 5CE6A 4U6CA 4IKTA 1N51A 5CDLA 2GG2A 5FCFA 2GU4A 1WY2A 2Q95A 2GG3A 3FMQA 5JFRA 2GTXA 4S2RP 1XGMA 2B3LA 5FCHA 4A6VA 2HOWA 1YW7A 4U71A 2BHBA 1XNZA 3MATA 4U1BA 3IL0A 3I7MA 2GGBA 1C21A 4S2TP 2GG8A 4RZZA 4IKUA 4U70A 5CLSA 3L24A 3PKBA 2EA4A 2BWVA 3PKCA 1WL9A 1C27A 2GG9A 3TAVA 2GU6A 4JUQA 2ADUA 4FLJA 5JHUA 4A6WA 4FUKA 2NQ6A 3S6BA 5CDVA 2EA2A 3OOOA 1B59A 3CTZA 4ZWUA 3IU9A 1QZYA 3CB5A 1XGSA 5CNXA 4RZYA 1WLRA 2BWYA 2GU5A 4OOKA 4Z7MA 2V3YA 1O0XA 1C22A 1WL6A 1KQ9A 4RGZ1 1C23A 5D6FA 1YVMA 3D27A 5E5BA 2B3KA 1QXYA 4FLKA 2V6CA 4FO8A 3PKAA 1KP0A 4ZNGA 2EVOA 3CB6A 2GGCA 2NQ7A 4IU6A 4U6EA 4EGEA 3BITA 4FKCA 3MR1A 4FLIA 4IECA 5CIKA 1QXZA 1R5HA 1Y1NA 4ZWPA 2Q8KA 3L7GA 2GG5A 2B3HA 4U6ZA 3FMRA 2BWSA 2GZ5A 2Q93A 3OVKA 4IKSA 2ZSGA 3PKEA 4IPAA 1PV9A 4U6WA 1W2MA 4ZWOA 2P99A 1YW8A 1MATA 3RORA 1M35A 4U75A 1A16A 3IG4A 2G6PA 2GU7A 2IW2A 2V3XA 2P9AA 4FO7A 4IDYA 3PN9A 2P98A 4U76A 4S00A 3BIQA 3FM3A 3O5VA 2GG0A 4IF7A 2BB7A 4KM3A 4IKRA 1XGOA 5D6EA 5CDEA 1JAWA 3Q6DA
chains in the Genus database with same CATH superfamily
1YJ3A 2Q94A 1QXWA 3PKDA 1BOAA 1CHMA 4S01A 1R58A 4MATA 4U73A 4U6JA 1WBQA 1W7VA 2GG7A 3TB5A 2BWXA 5JI6A 1KQ0A 4HXXA 4PNCA 1WN1A 4QR8A 2OAZA 2BHDA 1BN5A 2BH3A 2MATA 4U69A 2Q96A 4FLLA 2BN7A 4B28A 3PEBA 1C24A 3BIPA 2BWWA 2OKNA 4PV4A 5E2CA 1R5GA 1B6AA 3RVAA 2BWTA 4R60A 1WKMA 2DFIA 2EVMA 2GA2A 3MX6A 2EVCA 2BHAA 1YW9A 2BHCA 1XGNA 3IU8A 3IU7A 2Q92A 2V3ZA 3QOCA 2BWUA 5CE6A 4U6CA 4IKTA 1N51A 5CDLA 2GG2A 5FCFA 2GU4A 1WY2A 2Q95A 2GG3A 3FMQA 5JFRA 2GTXA 4S2RP 1XGMA 2B3LA 5FCHA 4A6VA 2HOWA 1YW7A 4U71A 2BHBA 1XNZA 3MATA 4U1BA 3IL0A 3I7MA 2GGBA 1C21A 4S2TP 2GG8A 4RZZA 4IKUA 4U70A 5CLSA 3L24A 3PKBA 2EA4A 2BWVA 3PKCA 1WL9A 1C27A 2GG9A 3TAVA 2GU6A 4JUQA 2ADUA 4FLJA 5JHUA 4A6WA 4FUKA 2NQ6A 3S6BA 5CDVA 2EA2A 3OOOA 1B59A 3CTZA 4ZWUA 3IU9A 1QZYA 3CB5A 1XGSA 5CNXA 4RZYA 1WLRA 2BWYA 2GU5A 4OOKA 4Z7MA 2V3YA 1O0XA 1C22A 1WL6A 1KQ9A 4RGZ1 1C23A 5D6FA 1YVMA 3D27A 5E5BA 2B3KA 1QXYA 4FLKA 2V6CA 4FO8A 3PKAA 1KP0A 4ZNGA 2EVOA 3CB6A 2GGCA 2NQ7A 4IU6A 4U6EA 4EGEA 3BITA 4FKCA 3MR1A 4FLIA 4IECA 5CIKA 1QXZA 1R5HA 1Y1NA 4ZWPA 2Q8KA 3L7GA 2GG5A 2B3HA 4U6ZA 3FMRA 2BWSA 2GZ5A 2Q93A 3OVKA 4IKSA 2ZSGA 3PKEA 4IPAA 1PV9A 4U6WA 1W2MA 4ZWOA 2P99A 1YW8A 1MATA 3RORA 1M35A 4U75A 1A16A 3IG4A 2G6PA 2GU7A 2IW2A 2V3XA 2P9AA 4FO7A 4IDYA 3PN9A 2P98A 4U76A 4S00A 3BIQA 3FM3A 3O5VA 2GG0A 4IF7A 2BB7A 4KM3A 4IKRA 1XGOA 5D6EA 5CDEA 1JAWA 3Q6DA
chains in the Genus database with same CATH topology
1YJ3A 2Q94A 1QXWA 3PKDA 1BOAA 1CHMA 4S01A 1R58A 4MATA 4U73A 4U6JA 1WBQA 1W7VA 2GG7A 3TB5A 2BWXA 5JI6A 1KQ0A 4HXXA 4PNCA 1WN1A 4QR8A 2OAZA 2BHDA 1BN5A 2BH3A 2MATA 4U69A 2Q96A 4FLLA 2BN7A 4B28A 3PEBA 1C24A 3BIPA 2BWWA 2OKNA 4PV4A 5E2CA 1R5GA 1B6AA 3RVAA 2BWTA 4R60A 1WKMA 2DFIA 2EVMA 2GA2A 3MX6A 2EVCA 2BHAA 1YW9A 2BHCA 1XGNA 3IU8A 3IU7A 2Q92A 2V3ZA 3QOCA 2BWUA 5CE6A 4U6CA 4IKTA 1N51A 5CDLA 2GG2A 5FCFA 2GU4A 1WY2A 2Q95A 2GG3A 3FMQA 5JFRA 2GTXA 4S2RP 1XGMA 2B3LA 5FCHA 4A6VA 2HOWA 1YW7A 4U71A 2BHBA 1XNZA 3MATA 4U1BA 3IL0A 3I7MA 2GGBA 1C21A 4S2TP 2GG8A 4RZZA 4IKUA 4U70A 5CLSA 3L24A 3PKBA 2EA4A 2BWVA 3PKCA 1WL9A 1C27A 2GG9A 3TAVA 2GU6A 4JUQA 2ADUA 4FLJA 5JHUA 4A6WA 4FUKA 2NQ6A 3S6BA 5CDVA 2EA2A 3OOOA 1B59A 3CTZA 4ZWUA 3IU9A 1QZYA 3CB5A 1XGSA 5CNXA 4RZYA 1WLRA 2BWYA 2GU5A 4OOKA 4Z7MA 2V3YA 1O0XA 1C22A 1WL6A 1KQ9A 4RGZ1 1C23A 5D6FA 1YVMA 3D27A 5E5BA 2B3KA 1QXYA 4FLKA 2V6CA 4FO8A 3PKAA 1KP0A 4ZNGA 2EVOA 3CB6A 2GGCA 2NQ7A 4IU6A 4U6EA 4EGEA 3BITA 4FKCA 3MR1A 4FLIA 4IECA 5CIKA 1QXZA 1R5HA 1Y1NA 4ZWPA 2Q8KA 3L7GA 2GG5A 2B3HA 4U6ZA 3FMRA 2BWSA 2GZ5A 2Q93A 3OVKA 4IKSA 2ZSGA 3PKEA 4IPAA 1PV9A 4U6WA 1W2MA 4ZWOA 2P99A 1YW8A 1MATA 3RORA 1M35A 4U75A 1A16A 3IG4A 2G6PA 2GU7A 2IW2A 2V3XA 2P9AA 4FO7A 4IDYA 3PN9A 2P98A 4U76A 4S00A 3BIQA 3FM3A 3O5VA 2GG0A 4IF7A 2BB7A 4KM3A 4IKRA 1XGOA 5D6EA 5CDEA 1JAWA 3Q6DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1YJ3 A;  2Q94 A;  1QXW A;  3PKD A;  1BOA A;  1CHM A;  4S01 A;  1R58 A;  4MAT A;  4U73 A;  4U6J A;  1WBQ A;  1W7V A;  2GG7 A;  3TB5 A;  2BWX A;  5JI6 A;  1KQ0 A;  4HXX A;  4PNC A;  1WN1 A;  4QR8 A;  2OAZ A;  2BHD A;  1BN5 A;  2BH3 A;  2MAT A;  4U69 A;  2Q96 A;  4FLL A;  2BN7 A;  4B28 A;  3PEB A;  1C24 A;  3BIP A;  2BWW A;  2OKN A;  4PV4 A;  5E2C A;  1R5G A;  1B6A A;  3RVA A;  2BWT A;  4R60 A;  1WKM A;  2DFI A;  2EVM A;  2GA2 A;  3MX6 A;  2EVC A;  2BHA A;  1YW9 A;  2BHC A;  1XGN A;  3IU8 A;  3IU7 A;  2Q92 A;  2V3Z A;  3QOC A;  2BWU A;  5CE6 A;  4U6C A;  4IKT A;  1N51 A;  5CDL A;  2GG2 A;  5FCF A;  2GU4 A;  1WY2 A;  2Q95 A;  2GG3 A;  3FMQ A;  5JFR A;  2GTX A;  4S2R P;  1XGM A;  2B3L A;  5FCH A;  4A6V A;  2HOW A;  1YW7 A;  4U71 A;  2BHB A;  1XNZ A;  3MAT A;  4U1B A;  3IL0 A;  3I7M A;  2GGB A;  1C21 A;  4S2T P;  2GG8 A;  4RZZ A;  4IKU A;  4U70 A;  5CLS A;  3L24 A;  3PKB A;  2EA4 A;  2BWV A;  3PKC A;  1WL9 A;  1C27 A;  2GG9 A;  3TAV A;  2GU6 A;  4JUQ A;  2ADU A;  4FLJ A;  5JHU A;  4A6W A;  4FUK A;  2NQ6 A;  3S6B A;  5CDV A;  2EA2 A;  3OOO A;  1B59 A;  3CTZ A;  4ZWU A;  3IU9 A;  1QZY A;  3CB5 A;  1XGS A;  5CNX A;  4RZY A;  1WLR A;  2BWY A;  2GU5 A;  4OOK A;  4Z7M A;  2V3Y A;  1O0X A;  1C22 A;  1WL6 A;  1KQ9 A;  4RGZ 1;  1C23 A;  5D6F A;  1YVM A;  3D27 A;  5E5B A;  2B3K A;  1QXY A;  4FLK A;  2V6C A;  4FO8 A;  3PKA A;  1KP0 A;  4ZNG A;  2EVO A;  3CB6 A;  2GGC A;  2NQ7 A;  4IU6 A;  4U6E A;  4EGE A;  3BIT A;  4FKC A;  3MR1 A;  4FLI A;  4IEC A;  5CIK A;  1QXZ A;  1R5H A;  1Y1N A;  4ZWP A;  2Q8K A;  3L7G A;  2GG5 A;  2B3H A;  4U6Z A;  3FMR A;  2BWS A;  2GZ5 A;  2Q93 A;  3OVK A;  4IKS A;  2ZSG A;  3PKE A;  4IPA A;  1PV9 A;  4U6W A;  1W2M A;  4ZWO A;  2P99 A;  1YW8 A;  1MAT A;  3ROR A;  1M35 A;  4U75 A;  1A16 A;  3IG4 A;  2G6P A;  2GU7 A;  2IW2 A;  2V3X A;  2P9A A;  4FO7 A;  4IDY A;  3PN9 A;  2P98 A;  4U76 A;  4S00 A;  3BIQ A;  3FM3 A;  3O5V A;  2GG0 A;  4IF7 A;  2BB7 A;  4KM3 A;  4IKR A;  1XGO A;  5D6E A;  5CDE A;  1JAW A;  3Q6D A; 
#chains in the Genus database with same CATH topology
 1YJ3 A;  2Q94 A;  1QXW A;  3PKD A;  1BOA A;  1CHM A;  4S01 A;  1R58 A;  4MAT A;  4U73 A;  4U6J A;  1WBQ A;  1W7V A;  2GG7 A;  3TB5 A;  2BWX A;  5JI6 A;  1KQ0 A;  4HXX A;  4PNC A;  1WN1 A;  4QR8 A;  2OAZ A;  2BHD A;  1BN5 A;  2BH3 A;  2MAT A;  4U69 A;  2Q96 A;  4FLL A;  2BN7 A;  4B28 A;  3PEB A;  1C24 A;  3BIP A;  2BWW A;  2OKN A;  4PV4 A;  5E2C A;  1R5G A;  1B6A A;  3RVA A;  2BWT A;  4R60 A;  1WKM A;  2DFI A;  2EVM A;  2GA2 A;  3MX6 A;  2EVC A;  2BHA A;  1YW9 A;  2BHC A;  1XGN A;  3IU8 A;  3IU7 A;  2Q92 A;  2V3Z A;  3QOC A;  2BWU A;  5CE6 A;  4U6C A;  4IKT A;  1N51 A;  5CDL A;  2GG2 A;  5FCF A;  2GU4 A;  1WY2 A;  2Q95 A;  2GG3 A;  3FMQ A;  5JFR A;  2GTX A;  4S2R P;  1XGM A;  2B3L A;  5FCH A;  4A6V A;  2HOW A;  1YW7 A;  4U71 A;  2BHB A;  1XNZ A;  3MAT A;  4U1B A;  3IL0 A;  3I7M A;  2GGB A;  1C21 A;  4S2T P;  2GG8 A;  4RZZ A;  4IKU A;  4U70 A;  5CLS A;  3L24 A;  3PKB A;  2EA4 A;  2BWV A;  3PKC A;  1WL9 A;  1C27 A;  2GG9 A;  3TAV A;  2GU6 A;  4JUQ A;  2ADU A;  4FLJ A;  5JHU A;  4A6W A;  4FUK A;  2NQ6 A;  3S6B A;  5CDV A;  2EA2 A;  3OOO A;  1B59 A;  3CTZ A;  4ZWU A;  3IU9 A;  1QZY A;  3CB5 A;  1XGS A;  5CNX A;  4RZY A;  1WLR A;  2BWY A;  2GU5 A;  4OOK A;  4Z7M A;  2V3Y A;  1O0X A;  1C22 A;  1WL6 A;  1KQ9 A;  4RGZ 1;  1C23 A;  5D6F A;  1YVM A;  3D27 A;  5E5B A;  2B3K A;  1QXY A;  4FLK A;  2V6C A;  4FO8 A;  3PKA A;  1KP0 A;  4ZNG A;  2EVO A;  3CB6 A;  2GGC A;  2NQ7 A;  4IU6 A;  4U6E A;  4EGE A;  3BIT A;  4FKC A;  3MR1 A;  4FLI A;  4IEC A;  5CIK A;  1QXZ A;  1R5H A;  1Y1N A;  4ZWP A;  2Q8K A;  3L7G A;  2GG5 A;  2B3H A;  4U6Z A;  3FMR A;  2BWS A;  2GZ5 A;  2Q93 A;  3OVK A;  4IKS A;  2ZSG A;  3PKE A;  4IPA A;  1PV9 A;  4U6W A;  1W2M A;  4ZWO A;  2P99 A;  1YW8 A;  1MAT A;  3ROR A;  1M35 A;  4U75 A;  1A16 A;  3IG4 A;  2G6P A;  2GU7 A;  2IW2 A;  2V3X A;  2P9A A;  4FO7 A;  4IDY A;  3PN9 A;  2P98 A;  4U76 A;  4S00 A;  3BIQ A;  3FM3 A;  3O5V A;  2GG0 A;  4IF7 A;  2BB7 A;  4KM3 A;  4IKR A;  1XGO A;  5D6E A;  5CDE A;  1JAW A;  3Q6D A; 
#chains in the Genus database with same CATH homology
 1YJ3 A;  2Q94 A;  1QXW A;  3PKD A;  1BOA A;  1CHM A;  4S01 A;  1R58 A;  4MAT A;  4U73 A;  4U6J A;  1WBQ A;  1W7V A;  2GG7 A;  3TB5 A;  2BWX A;  5JI6 A;  1KQ0 A;  4HXX A;  4PNC A;  1WN1 A;  4QR8 A;  2OAZ A;  2BHD A;  1BN5 A;  2BH3 A;  2MAT A;  4U69 A;  2Q96 A;  4FLL A;  2BN7 A;  4B28 A;  3PEB A;  1C24 A;  3BIP A;  2BWW A;  2OKN A;  4PV4 A;  5E2C A;  1R5G A;  1B6A A;  3RVA A;  2BWT A;  4R60 A;  1WKM A;  2DFI A;  2EVM A;  2GA2 A;  3MX6 A;  2EVC A;  2BHA A;  1YW9 A;  2BHC A;  1XGN A;  3IU8 A;  3IU7 A;  2Q92 A;  2V3Z A;  3QOC A;  2BWU A;  5CE6 A;  4U6C A;  4IKT A;  1N51 A;  5CDL A;  2GG2 A;  5FCF A;  2GU4 A;  1WY2 A;  2Q95 A;  2GG3 A;  3FMQ A;  5JFR A;  2GTX A;  4S2R P;  1XGM A;  2B3L A;  5FCH A;  4A6V A;  2HOW A;  1YW7 A;  4U71 A;  2BHB A;  1XNZ A;  3MAT A;  4U1B A;  3IL0 A;  3I7M A;  2GGB A;  1C21 A;  4S2T P;  2GG8 A;  4RZZ A;  4IKU A;  4U70 A;  5CLS A;  3L24 A;  3PKB A;  2EA4 A;  2BWV A;  3PKC A;  1WL9 A;  1C27 A;  2GG9 A;  3TAV A;  2GU6 A;  4JUQ A;  2ADU A;  4FLJ A;  5JHU A;  4A6W A;  4FUK A;  2NQ6 A;  3S6B A;  5CDV A;  2EA2 A;  3OOO A;  1B59 A;  3CTZ A;  4ZWU A;  3IU9 A;  1QZY A;  3CB5 A;  1XGS A;  5CNX A;  4RZY A;  1WLR A;  2BWY A;  2GU5 A;  4OOK A;  4Z7M A;  2V3Y A;  1O0X A;  1C22 A;  1WL6 A;  1KQ9 A;  4RGZ 1;  1C23 A;  5D6F A;  1YVM A;  3D27 A;  5E5B A;  2B3K A;  1QXY A;  4FLK A;  2V6C A;  4FO8 A;  3PKA A;  1KP0 A;  4ZNG A;  2EVO A;  3CB6 A;  2GGC A;  2NQ7 A;  4IU6 A;  4U6E A;  4EGE A;  3BIT A;  4FKC A;  3MR1 A;  4FLI A;  4IEC A;  5CIK A;  1QXZ A;  1R5H A;  1Y1N A;  4ZWP A;  2Q8K A;  3L7G A;  2GG5 A;  2B3H A;  4U6Z A;  3FMR A;  2BWS A;  2GZ5 A;  2Q93 A;  3OVK A;  4IKS A;  2ZSG A;  3PKE A;  4IPA A;  1PV9 A;  4U6W A;  1W2M A;  4ZWO A;  2P99 A;  1YW8 A;  1MAT A;  3ROR A;  1M35 A;  4U75 A;  1A16 A;  3IG4 A;  2G6P A;  2GU7 A;  2IW2 A;  2V3X A;  2P9A A;  4FO7 A;  4IDY A;  3PN9 A;  2P98 A;  4U76 A;  4S00 A;  3BIQ A;  3FM3 A;  3O5V A;  2GG0 A;  4IF7 A;  2BB7 A;  4KM3 A;  4IKR A;  1XGO A;  5D6E A;  5CDE A;  1JAW A;  3Q6D A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...