3PDE | Genus

Total Genus 114

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	114
sequence length	300
structure length	289
Chain Sequence	SLINARLIAFEDQWVPALNAPLKQAILADSQDAQLAAAMTYSVLAGGKRLRPLLTVATMQSLGVTFVPERHWRPVMALELLHTYSLIHDDLPAMDNDALRRGEPTNHVKFGAGMATLAGDGLLTLAFQWLTATDLPATMQAALVQALATAAGPSGMVAGQAKDIQSEHVNLPLSQLRVLHKEKTGALLHYAVQAGLILGQAPEAQWPAYLQFADAFGLAFQIYDDILDVVSSADEAKNTYPGKLGLIGANQALIDTIHSGQAALQGLPTSTQRDDLAAFFSYFDTERVN

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Transferase
source organism	Lactobacillus brevis
publication title	Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. pubmed doi rcsb
molecule keywords	Farnesyl-diphosphate synthase
total genus	114
structure length	289
sequence length	300
chains with identical sequence	B, C, D
ec nomenclature	ec 2.5.1.10: (2E,6E)-farnesyl diphosphate synthase.
pdb deposition date	2010-10-22

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00348	polyprenyl_synt	Polyprenyl synthetase

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.10.600.10	Mainly Alpha	Orthogonal Bundle	Farnesyl Diphosphate Synthase	Farnesyl Diphosphate Synthase	3pdeA00

5ILZA 1UBYA 4QXSF 4PVYF 3WCMA 1YYRA 2E95A 4DWGA 3KRCB 3P5PA 4DI5A 5CG5A 5B0KA 4NFKF 2E91A 2ZCRA 3WCGA 1YYTA 3ZMCA 3Q2QA 5B0JA 3IBAA 3CP6A 5IKAA 4LPHF 5IKHA 2F8CF 3APZA 5IM1A 2FORA 4E9ZA 4F6VA 3DYHA 3ASXA 4OMHA 5EATA 2ZCSA 4OKZA 3WE9A 3WEFA 1YQ7A 1V4EA 3TC1A 5IMNA 3WCJA 3EZ3A 5A0JA 3WCEA 3ZCDA 3WCAA 4KVYA 4DEMF 2Z4YA 3KB9A 5B02A 2Z7IA 3N45F 2VF6A 3BNXA 4LFGA 4Q23A 3ID0A 2P1CA 4LLSA 3WEHA 5ILDA 3KROA 3OABA 4MC0A 5ERMA 3Q2ZA 4K10A 4KWDA 2Z7HA 5A0KA 4WK5A 1JFGA 1KIZA 5AHUB 3N5JF 3WCDA 3N46F 1HX9A 5IL3A 2Z78A 3SDRA 3LDWA 3LJIA 1ZW5A 3NPKA 4GP2A 3EGTA 4XQRF 3WCFA 1HM4A 4KQ5A 3WCLA 3N6KF 3QKCA 4KKMA 1VG7A 5ERNA 4LPGF 1WL3A 1PS1A 1N21A 3MZVA 3W7FA 4HD1A 3VJ9A 1V4HA 3EFQA 5AELA 3ACWA 2OGDA 3LGKA 1HXAA 5E8LA 2E90A 3AQ0A 2J5CA 5EAUA 3ZL6A 3LOMA 3TFNA 3TFPA 2F94F 3KRFA 4NG6A 3ZMBA 1N22A 2AETA 5DW7A 2ZCOA 3M00A 1YYUA 5ILJA 5HN8A 4N1ZF 5JA0F 3NPRA 3S9VA 1WMWA 4JXYA 2PS6A 3LZ9A 1V4JA 2AEKA 4LZ3A 3WEKA 4KPDA 3VJDA 4RXDA 4KVWA 5E8KA 4KFAA 3LLWA 2E93A 3IPIA 4EA2A 5DZ2A 2E4OA 2Z4XA 4QPFA 4ZQ8A 2ONHA 3OYRA 4LLTA 5CG6A 1HXGA 3SDTA 3P8LA 3PYBA 5B0LA 4KQSA 1UBXA 1VG2A 1HM7A 4EA1A 3ICZA 2J1PA 4LIXA 3SDQA 4LZCA 3OACA 3PKOA 2F9KF 5JV0F 3B7LA 2Q58A 2J1OA 2PS7A 5C05A 1WL1A 4MC3A 3SDVA 2O1OA 2AZJA 2Q80A 5EASA 4JZXA 1VG4A 2AELA 3ICNA 3Q30A 3M9UA 3WJOA 3WEJA 3WCHA 4JZBA 5DHKA 1N24A 1WKZA 5AYPA 3ZOUA 3NRIA 5E8HA 5EROA 2FTZA 4PVXF 3VJBA 1DGPA 3WCIA 1N23A 5ILIA 3LG5A 1WL2A 3N3LF 4LUUA 2E8VA 1WY0A 4H5EF 3P41A 4LTZA 4JYXA 4OMGA 3KBKA 1UBWA 4LZ0A 3QQVA 3UCAA 3VJ8A 3NF2A 1DI1A 3Q1OA 5A0IA 4DHDA 3KROB 3OABB 3VJEA 5AFXA 5IL8A 2AZLA 1RQJA 3SAEA 5IN8A 4LOBA 5DJRF 1UBVA 4UMJA 4LTVA 5H9DA 3ACYA 4FJQA 5ILHA 2E92A 4FP4A 1V4KA 5IMPA 3N1VF 4P0VA 4N9UA 3CC9A 4OGUA 5B0MA 2E8UA 2F8ZF 4GA3A 5IK0A 2ONGA 2Z4ZA 3G4FA 4KVDA 3PH7A 4RXCA 2DH4A 3MAVA 3AQCB 3S4JA 4DWBA 2E8XA 3RYWA 3N0FA 3PYAA 3V66A 5JUZF 5IVGA 2PS4A 2Q9ZA 4RNQA 3TFVA 1KIYA 3RMGA 3BNYA 3P8RA 5DJPF 4NFIF 3CKEA 2Q9YA 4RXEA 4XQSF 3LEEA 3N1WF 3KRFB 3WSBA 4DXJA 2ZEVA 3LGZB 5ILYA 4JXNA 4P0WA 3LK5A 2I19A 3LSNA 1N20A 2ZCQA 3G4DA 2F7MF 5DGSF 4KVIA 3P5RA 1YYSA 4P0XA 5JV2F 4F62A 1N1ZA 2ZY1A 1YHMA 4KK2A 2E8WA 4L2XF 3TS7A 1YJ4A 2QISA 4DZWA 3M0GA 1FPSA 3ADZA 1WL0A 4RYPA 2H8OA 4JVJF 4LFVF 1VG3A 3ICKA 2OPNA 4NKFA 4GP1A 2F89F 5IK9A 2Z4VA 4E9UA 4LFEA 1YHLA 1VG6A 1YYQA 4H5CF 2E8TA 4GAXA 2AZKA 4LA6A 5DJVF 3DYGA 4LXWA 3V1XA 3LMDA 3KRPA 4H5DF 5HN9A 3N49F 5ILKA 3OACB 3WEIA 3SDUA 4KPJA 3WCCA 3N5HF 4NKEA 3RYEA 3WSAA 3ICMA 1RQIA 5DGNF 1YHKA 2Z52A 5ER8A 3WEGA 3V1VA 4OKMA 1V4IA 2ZEUA 3RBMA 4E1EA 4KQUA 5DGMF 3KRAA 4EA0A 3WCBA 1HXCA 5KSXF 3AQBB 5DHIA 5B0IA 1RTRA 3WJNA 3VJCA 3N3DA 3KRCA 2RAHA 2EWGA 2Z4WA 1YV5A 1EZFA 2PS5A 3AE0A 5HNAA 3M02A 5DIQF 3KRPB 3M01A 2OPMA 3WJKA 3PDEA 4MC8A 1JFAA 5B03A 5B00A 2E94A 5JV1F 3WC9A 5IMIA 3DYFA 4KUXA 3LVSA 3N0GA 4RXAA 5B01A 5HN7A 3ACXA 3VJAA 4LA5A 4XQTF 4F6XA 4NFJF 4NUAA 1N1BA 2F92F 3KRAB 5I1UA 5IK6A 2PS8A 2OA6A 2Z50A
chains in the Genus database with same CATH superfamily

#chains in the Genus database with same CATH superfamily
 5ILZ A;  1UBY A;  4QXS F;  4PVY F;  3WCM A;  1YYR A;  2E95 A;  4DWG A;  3KRC B;  3P5P A;  4DI5 A;  5CG5 A;  5B0K A;  4NFK F;  2E91 A;  2ZCR A;  3WCG A;  1YYT A;  3ZMC A;  3Q2Q A;  5B0J A;  3IBA A;  3CP6 A;  5IKA A;  4LPH F;  5IKH A;  2F8C F;  3APZ A;  5IM1 A;  2FOR A;  4E9Z A;  4F6V A;  3DYH A;  3ASX A;  4OMH A;  5EAT A;  2ZCS A;  4OKZ A;  3WE9 A;  3WEF A;  1YQ7 A;  1V4E A;  3TC1 A;  5IMN A;  3WCJ A;  3EZ3 A;  5A0J A;  3WCE A;  3ZCD A;  3WCA A;  4KVY A;  4DEM F;  2Z4Y A;  3KB9 A;  5B02 A;  2Z7I A;  3N45 F;  2VF6 A;  3BNX A;  4LFG A;  4Q23 A;  3ID0 A;  2P1C A;  4LLS A;  3WEH A;  5ILD A;  3KRO A;  3OAB A;  4MC0 A;  5ERM A;  3Q2Z A;  4K10 A;  4KWD A;  2Z7H A;  5A0K A;  4WK5 A;  1JFG A;  1KIZ A;  5AHU B;  3N5J F;  3WCD A;  3N46 F;  1HX9 A;  5IL3 A;  2Z78 A;  3SDR A;  3LDW A;  3LJI A;  1ZW5 A;  3NPK A;  4GP2 A;  3EGT A;  4XQR F;  3WCF A;  1HM4 A;  4KQ5 A;  3WCL A;  3N6K F;  3QKC A;  4KKM A;  1VG7 A;  5ERN A;  4LPG F;  1WL3 A;  1PS1 A;  1N21 A;  3MZV A;  3W7F A;  4HD1 A;  3VJ9 A;  1V4H A;  3EFQ A;  5AEL A;  3ACW A;  2OGD A;  3LGK A;  1HXA A;  5E8L A;  2E90 A;  3AQ0 A;  2J5C A;  5EAU A;  3ZL6 A;  3LOM A;  3TFN A;  3TFP A;  2F94 F;  3KRF A;  4NG6 A;  3ZMB A;  1N22 A;  2AET A;  5DW7 A;  2ZCO A;  3M00 A;  1YYU A;  5ILJ A;  5HN8 A;  4N1Z F;  5JA0 F;  3NPR A;  3S9V A;  1WMW A;  4JXY A;  2PS6 A;  3LZ9 A;  1V4J A;  2AEK A;  4LZ3 A;  3WEK A;  4KPD A;  3VJD A;  4RXD A;  4KVW A;  5E8K A;  4KFA A;  3LLW A;  2E93 A;  3IPI A;  4EA2 A;  5DZ2 A;  2E4O A;  2Z4X A;  4QPF A;  4ZQ8 A;  2ONH A;  3OYR A;  4LLT A;  5CG6 A;  1HXG A;  3SDT A;  3P8L A;  3PYB A;  5B0L A;  4KQS A;  1UBX A;  1VG2 A;  1HM7 A;  4EA1 A;  3ICZ A;  2J1P A;  4LIX A;  3SDQ A;  4LZC A;  3OAC A;  3PKO A;  2F9K F;  5JV0 F;  3B7L A;  2Q58 A;  2J1O A;  2PS7 A;  5C05 A;  1WL1 A;  4MC3 A;  3SDV A;  2O1O A;  2AZJ A;  2Q80 A;  5EAS A;  4JZX A;  1VG4 A;  2AEL A;  3ICN A;  3Q30 A;  3M9U A;  3WJO A;  3WEJ A;  3WCH A;  4JZB A;  5DHK A;  1N24 A;  1WKZ A;  5AYP A;  3ZOU A;  3NRI A;  5E8H A;  5ERO A;  2FTZ A;  4PVX F;  3VJB A;  1DGP A;  3WCI A;  1N23 A;  5ILI A;  3LG5 A;  1WL2 A;  3N3L F;  4LUU A;  2E8V A;  1WY0 A;  4H5E F;  3P41 A;  4LTZ A;  4JYX A;  4OMG A;  3KBK A;  1UBW A;  4LZ0 A;  3QQV A;  3UCA A;  3VJ8 A;  3NF2 A;  1DI1 A;  3Q1O A;  5A0I A;  4DHD A;  3KRO B;  3OAB B;  3VJE A;  5AFX A;  5IL8 A;  2AZL A;  1RQJ A;  3SAE A;  5IN8 A;  4LOB A;  5DJR F;  1UBV A;  4UMJ A;  4LTV A;  5H9D A;  3ACY A;  4FJQ A;  5ILH A;  2E92 A;  4FP4 A;  1V4K A;  5IMP A;  3N1V F;  4P0V A;  4N9U A;  3CC9 A;  4OGU A;  5B0M A;  2E8U A;  2F8Z F;  4GA3 A;  5IK0 A;  2ONG A;  2Z4Z A;  3G4F A;  4KVD A;  3PH7 A;  4RXC A;  2DH4 A;  3MAV A;  3AQC B;  3S4J A;  4DWB A;  2E8X A;  3RYW A;  3N0F A;  3PYA A;  3V66 A;  5JUZ F;  5IVG A;  2PS4 A;  2Q9Z A;  4RNQ A;  3TFV A;  1KIY A;  3RMG A;  3BNY A;  3P8R A;  5DJP F;  4NFI F;  3CKE A;  2Q9Y A;  4RXE A;  4XQS F;  3LEE A;  3N1W F;  3KRF B;  3WSB A;  4DXJ A;  2ZEV A;  3LGZ B;  5ILY A;  4JXN A;  4P0W A;  3LK5 A;  2I19 A;  3LSN A;  1N20 A;  2ZCQ A;  3G4D A;  2F7M F;  5DGS F;  4KVI A;  3P5R A;  1YYS A;  4P0X A;  5JV2 F;  4F62 A;  1N1Z A;  2ZY1 A;  1YHM A;  4KK2 A;  2E8W A;  4L2X F;  3TS7 A;  1YJ4 A;  2QIS A;  4DZW A;  3M0G A;  1FPS A;  3ADZ A;  1WL0 A;  4RYP A;  2H8O A;  4JVJ F;  4LFV F;  1VG3 A;  3ICK A;  2OPN A;  4NKF A;  4GP1 A;  2F89 F;  5IK9 A;  2Z4V A;  4E9U A;  4LFE A;  1YHL A;  1VG6 A;  1YYQ A;  4H5C F;  2E8T A;  4GAX A;  2AZK A;  4LA6 A;  5DJV F;  3DYG A;  4LXW A;  3V1X A;  3LMD A;  3KRP A;  4H5D F;  5HN9 A;  3N49 F;  5ILK A;  3OAC B;  3WEI A;  3SDU A;  4KPJ A;  3WCC A;  3N5H F;  4NKE A;  3RYE A;  3WSA A;  3ICM A;  1RQI A;  5DGN F;  1YHK A;  2Z52 A;  5ER8 A;  3WEG A;  3V1V A;  4OKM A;  1V4I A;  2ZEU A;  3RBM A;  4E1E A;  4KQU A;  5DGM F;  3KRA A;  4EA0 A;  3WCB A;  1HXC A;  5KSX F;  3AQB B;  5DHI A;  5B0I A;  1RTR A;  3WJN A;  3VJC A;  3N3D A;  3KRC A;  2RAH A;  2EWG A;  2Z4W A;  1YV5 A;  1EZF A;  2PS5 A;  3AE0 A;  5HNA A;  3M02 A;  5DIQ F;  3KRP B;  3M01 A;  2OPM A;  3WJK A;  3PDE A;  4MC8 A;  1JFA A;  5B03 A;  5B00 A;  2E94 A;  5JV1 F;  3WC9 A;  5IMI A;  3DYF A;  4KUX A;  3LVS A;  3N0G A;  4RXA A;  5B01 A;  5HN7 A;  3ACX A;  3VJA A;  4LA5 A;  4XQT F;  4F6X A;  4NFJ F;  4NUA A;  1N1B A;  2F92 F;  3KRA B;  5I1U A;  5IK6 A;  2PS8 A;  2OA6 A;  2Z50 A; 
#chains in the Genus database with same CATH topology
 5ILZ A;  1UBY A;  4QXS F;  4PVY F;  3WCM A;  1YYR A;  2E95 A;  4DWG A;  3KRC B;  3P5P A;  4DI5 A;  5CG5 A;  5B0K A;  4NFK F;  2E91 A;  2ZCR A;  3WCG A;  1YYT A;  3ZMC A;  3Q2Q A;  5B0J A;  3IBA A;  3CP6 A;  5IKA A;  4LPH F;  5IKH A;  2F8C F;  3APZ A;  5IM1 A;  2FOR A;  4E9Z A;  4F6V A;  3DYH A;  3ASX A;  4OMH A;  5EAT A;  2ZCS A;  4OKZ A;  3WE9 A;  3WEF A;  1YQ7 A;  1V4E A;  3TC1 A;  5IMN A;  3WCJ A;  3EZ3 A;  5A0J A;  3WCE A;  3ZCD A;  3WCA A;  4KVY A;  4DEM F;  2Z4Y A;  3KB9 A;  5B02 A;  2Z7I A;  3N45 F;  2VF6 A;  3BNX A;  4LFG A;  4Q23 A;  3ID0 A;  2P1C A;  4LLS A;  3WEH A;  5ILD A;  3KRO A;  3OAB A;  4MC0 A;  5ERM A;  3Q2Z A;  4K10 A;  4KWD A;  2Z7H A;  5A0K A;  4WK5 A;  1JFG A;  1KIZ A;  5AHU B;  3N5J F;  3WCD A;  3N46 F;  1HX9 A;  5IL3 A;  2Z78 A;  3SDR A;  3LDW A;  3LJI A;  1ZW5 A;  3NPK A;  4GP2 A;  3EGT A;  4XQR F;  3WCF A;  1HM4 A;  4KQ5 A;  3WCL A;  3N6K F;  3QKC A;  4KKM A;  1VG7 A;  5ERN A;  4LPG F;  1WL3 A;  1PS1 A;  1N21 A;  3MZV A;  3W7F A;  4HD1 A;  3VJ9 A;  1V4H A;  3EFQ A;  5AEL A;  3ACW A;  2OGD A;  3LGK A;  1HXA A;  5E8L A;  2E90 A;  3AQ0 A;  2J5C A;  5EAU A;  3ZL6 A;  3LOM A;  3TFN A;  3TFP A;  2F94 F;  3KRF A;  4NG6 A;  3ZMB A;  1N22 A;  2AET A;  5DW7 A;  2ZCO A;  3M00 A;  1YYU A;  5ILJ A;  5HN8 A;  4N1Z F;  5JA0 F;  3NPR A;  3S9V A;  1WMW A;  4JXY A;  2PS6 A;  3LZ9 A;  1V4J A;  2AEK A;  4LZ3 A;  3WEK A;  4KPD A;  3VJD A;  4RXD A;  4KVW A;  5E8K A;  4KFA A;  3LLW A;  2E93 A;  3IPI A;  4EA2 A;  5DZ2 A;  2E4O A;  2Z4X A;  4QPF A;  4ZQ8 A;  2ONH A;  3OYR A;  4LLT A;  5CG6 A;  1HXG A;  3SDT A;  3P8L A;  3PYB A;  5B0L A;  4KQS A;  1UBX A;  1VG2 A;  1HM7 A;  4EA1 A;  3ICZ A;  2J1P A;  4LIX A;  3SDQ A;  4LZC A;  3OAC A;  3PKO A;  2F9K F;  5JV0 F;  3B7L A;  2Q58 A;  2J1O A;  2PS7 A;  5C05 A;  1WL1 A;  4MC3 A;  3SDV A;  2O1O A;  2AZJ A;  2Q80 A;  5EAS A;  4JZX A;  1VG4 A;  2AEL A;  3ICN A;  3Q30 A;  3M9U A;  3WJO A;  3WEJ A;  3WCH A;  4JZB A;  5DHK A;  1N24 A;  1WKZ A;  5AYP A;  3ZOU A;  3NRI A;  5E8H A;  5ERO A;  2FTZ A;  4PVX F;  3VJB A;  1DGP A;  3WCI A;  1N23 A;  5ILI A;  3LG5 A;  1WL2 A;  3N3L F;  4LUU A;  2E8V A;  1WY0 A;  4H5E F;  3P41 A;  4LTZ A;  4JYX A;  4OMG A;  3KBK A;  1UBW A;  4LZ0 A;  3QQV A;  3UCA A;  3VJ8 A;  3NF2 A;  1DI1 A;  3Q1O A;  5A0I A;  4DHD A;  3KRO B;  3OAB B;  3VJE A;  5AFX A;  5IL8 A;  2AZL A;  1RQJ A;  3SAE A;  5IN8 A;  4LOB A;  5DJR F;  1UBV A;  4UMJ A;  4LTV A;  5H9D A;  3ACY A;  4FJQ A;  5ILH A;  2E92 A;  4FP4 A;  1V4K A;  5IMP A;  3N1V F;  4P0V A;  4N9U A;  3CC9 A;  4OGU A;  5B0M A;  2E8U A;  2F8Z F;  4GA3 A;  5IK0 A;  2ONG A;  2Z4Z A;  3G4F A;  4KVD A;  3PH7 A;  4RXC A;  2DH4 A;  3MAV A;  3AQC B;  3S4J A;  4DWB A;  2E8X A;  3RYW A;  3N0F A;  3PYA A;  3V66 A;  5JUZ F;  5IVG A;  2PS4 A;  2Q9Z A;  4RNQ A;  3TFV A;  1KIY A;  3RMG A;  3BNY A;  3P8R A;  5DJP F;  4NFI F;  3CKE A;  2Q9Y A;  4RXE A;  4XQS F;  3LEE A;  3N1W F;  3KRF B;  3WSB A;  4DXJ A;  2ZEV A;  3LGZ B;  5ILY A;  4JXN A;  4P0W A;  3LK5 A;  2I19 A;  3LSN A;  1N20 A;  2ZCQ A;  3G4D A;  2F7M F;  5DGS F;  4KVI A;  3P5R A;  1YYS A;  4P0X A;  5JV2 F;  4F62 A;  1N1Z A;  2ZY1 A;  1YHM A;  4KK2 A;  2E8W A;  4L2X F;  3TS7 A;  1YJ4 A;  2QIS A;  4DZW A;  3M0G A;  1FPS A;  3ADZ A;  1WL0 A;  4RYP A;  2H8O A;  4JVJ F;  4LFV F;  1VG3 A;  3ICK A;  2OPN A;  4NKF A;  4GP1 A;  2F89 F;  5IK9 A;  2Z4V A;  4E9U A;  4LFE A;  1YHL A;  1VG6 A;  1YYQ A;  4H5C F;  2E8T A;  4GAX A;  2AZK A;  4LA6 A;  5DJV F;  3DYG A;  4LXW A;  3V1X A;  3LMD A;  3KRP A;  4H5D F;  5HN9 A;  3N49 F;  5ILK A;  3OAC B;  3WEI A;  3SDU A;  4KPJ A;  3WCC A;  3N5H F;  4NKE A;  3RYE A;  3WSA A;  3ICM A;  1RQI A;  5DGN F;  1YHK A;  2Z52 A;  5ER8 A;  3WEG A;  3V1V A;  4OKM A;  1V4I A;  2ZEU A;  3RBM A;  4E1E A;  4KQU A;  5DGM F;  3KRA A;  4EA0 A;  3WCB A;  1HXC A;  5KSX F;  3AQB B;  5DHI A;  5B0I A;  1RTR A;  3WJN A;  3VJC A;  3N3D A;  3KRC A;  2RAH A;  2EWG A;  2Z4W A;  1YV5 A;  1EZF A;  2PS5 A;  3AE0 A;  5HNA A;  3M02 A;  5DIQ F;  3KRP B;  3M01 A;  2OPM A;  3WJK A;  3PDE A;  4MC8 A;  1JFA A;  5B03 A;  5B00 A;  2E94 A;  5JV1 F;  3WC9 A;  5IMI A;  3DYF A;  4KUX A;  3LVS A;  3N0G A;  4RXA A;  5B01 A;  5HN7 A;  3ACX A;  3VJA A;  4LA5 A;  4XQT F;  4F6X A;  4NFJ F;  4NUA A;  1N1B A;  2F92 F;  3KRA B;  5I1U A;  5IK6 A;  2PS8 A;  2OA6 A;  2Z50 A; 
#chains in the Genus database with same CATH homology
 5ILZ A;  1UBY A;  4QXS F;  4PVY F;  3WCM A;  1YYR A;  2E95 A;  4DWG A;  3KRC B;  3P5P A;  4DI5 A;  5CG5 A;  5B0K A;  4NFK F;  2E91 A;  2ZCR A;  3WCG A;  1YYT A;  3ZMC A;  3Q2Q A;  5B0J A;  3IBA A;  3CP6 A;  5IKA A;  4LPH F;  5IKH A;  2F8C F;  3APZ A;  5IM1 A;  2FOR A;  4E9Z A;  4F6V A;  3DYH A;  3ASX A;  4OMH A;  5EAT A;  2ZCS A;  4OKZ A;  3WE9 A;  3WEF A;  1YQ7 A;  1V4E A;  3TC1 A;  5IMN A;  3WCJ A;  3EZ3 A;  5A0J A;  3WCE A;  3ZCD A;  3WCA A;  4KVY A;  4DEM F;  2Z4Y A;  3KB9 A;  5B02 A;  2Z7I A;  3N45 F;  2VF6 A;  3BNX A;  4LFG A;  4Q23 A;  3ID0 A;  2P1C A;  4LLS A;  3WEH A;  5ILD A;  3KRO A;  3OAB A;  4MC0 A;  5ERM A;  3Q2Z A;  4K10 A;  4KWD A;  2Z7H A;  5A0K A;  4WK5 A;  1JFG A;  1KIZ A;  5AHU B;  3N5J F;  3WCD A;  3N46 F;  1HX9 A;  5IL3 A;  2Z78 A;  3SDR A;  3LDW A;  3LJI A;  1ZW5 A;  3NPK A;  4GP2 A;  3EGT A;  4XQR F;  3WCF A;  1HM4 A;  4KQ5 A;  3WCL A;  3N6K F;  3QKC A;  4KKM A;  1VG7 A;  5ERN A;  4LPG F;  1WL3 A;  1PS1 A;  1N21 A;  3MZV A;  3W7F A;  4HD1 A;  3VJ9 A;  1V4H A;  3EFQ A;  5AEL A;  3ACW A;  2OGD A;  3LGK A;  1HXA A;  5E8L A;  2E90 A;  3AQ0 A;  2J5C A;  5EAU A;  3ZL6 A;  3LOM A;  3TFN A;  3TFP A;  2F94 F;  3KRF A;  4NG6 A;  3ZMB A;  1N22 A;  2AET A;  5DW7 A;  2ZCO A;  3M00 A;  1YYU A;  5ILJ A;  5HN8 A;  4N1Z F;  5JA0 F;  3NPR A;  3S9V A;  1WMW A;  4JXY A;  2PS6 A;  3LZ9 A;  1V4J A;  2AEK A;  4LZ3 A;  3WEK A;  4KPD A;  3VJD A;  4RXD A;  4KVW A;  5E8K A;  4KFA A;  3LLW A;  2E93 A;  3IPI A;  4EA2 A;  5DZ2 A;  2E4O A;  2Z4X A;  4QPF A;  4ZQ8 A;  2ONH A;  3OYR A;  4LLT A;  5CG6 A;  1HXG A;  3SDT A;  3P8L A;  3PYB A;  5B0L A;  4KQS A;  1UBX A;  1VG2 A;  1HM7 A;  4EA1 A;  3ICZ A;  2J1P A;  4LIX A;  3SDQ A;  4LZC A;  3OAC A;  3PKO A;  2F9K F;  5JV0 F;  3B7L A;  2Q58 A;  2J1O A;  2PS7 A;  5C05 A;  1WL1 A;  4MC3 A;  3SDV A;  2O1O A;  2AZJ A;  2Q80 A;  5EAS A;  4JZX A;  1VG4 A;  2AEL A;  3ICN A;  3Q30 A;  3M9U A;  3WJO A;  3WEJ A;  3WCH A;  4JZB A;  5DHK A;  1N24 A;  1WKZ A;  5AYP A;  3ZOU A;  3NRI A;  5E8H A;  5ERO A;  2FTZ A;  4PVX F;  3VJB A;  1DGP A;  3WCI A;  1N23 A;  5ILI A;  3LG5 A;  1WL2 A;  3N3L F;  4LUU A;  2E8V A;  1WY0 A;  4H5E F;  3P41 A;  4LTZ A;  4JYX A;  4OMG A;  3KBK A;  1UBW A;  4LZ0 A;  3QQV A;  3UCA A;  3VJ8 A;  3NF2 A;  1DI1 A;  3Q1O A;  5A0I A;  4DHD A;  3KRO B;  3OAB B;  3VJE A;  5AFX A;  5IL8 A;  2AZL A;  1RQJ A;  3SAE A;  5IN8 A;  4LOB A;  5DJR F;  1UBV A;  4UMJ A;  4LTV A;  5H9D A;  3ACY A;  4FJQ A;  5ILH A;  2E92 A;  4FP4 A;  1V4K A;  5IMP A;  3N1V F;  4P0V A;  4N9U A;  3CC9 A;  4OGU A;  5B0M A;  2E8U A;  2F8Z F;  4GA3 A;  5IK0 A;  2ONG A;  2Z4Z A;  3G4F A;  4KVD A;  3PH7 A;  4RXC A;  2DH4 A;  3MAV A;  3AQC B;  3S4J A;  4DWB A;  2E8X A;  3RYW A;  3N0F A;  3PYA A;  3V66 A;  5JUZ F;  5IVG A;  2PS4 A;  2Q9Z A;  4RNQ A;  3TFV A;  1KIY A;  3RMG A;  3BNY A;  3P8R A;  5DJP F;  4NFI F;  3CKE A;  2Q9Y A;  4RXE A;  4XQS F;  3LEE A;  3N1W F;  3KRF B;  3WSB A;  4DXJ A;  2ZEV A;  3LGZ B;  5ILY A;  4JXN A;  4P0W A;  3LK5 A;  2I19 A;  3LSN A;  1N20 A;  2ZCQ A;  3G4D A;  2F7M F;  5DGS F;  4KVI A;  3P5R A;  1YYS A;  4P0X A;  5JV2 F;  4F62 A;  1N1Z A;  2ZY1 A;  1YHM A;  4KK2 A;  2E8W A;  4L2X F;  3TS7 A;  1YJ4 A;  2QIS A;  4DZW A;  3M0G A;  1FPS A;  3ADZ A;  1WL0 A;  4RYP A;  2H8O A;  4JVJ F;  4LFV F;  1VG3 A;  3ICK A;  2OPN A;  4NKF A;  4GP1 A;  2F89 F;  5IK9 A;  2Z4V A;  4E9U A;  4LFE A;  1YHL A;  1VG6 A;  1YYQ A;  4H5C F;  2E8T A;  4GAX A;  2AZK A;  4LA6 A;  5DJV F;  3DYG A;  4LXW A;  3V1X A;  3LMD A;  3KRP A;  4H5D F;  5HN9 A;  3N49 F;  5ILK A;  3OAC B;  3WEI A;  3SDU A;  4KPJ A;  3WCC A;  3N5H F;  4NKE A;  3RYE A;  3WSA A;  3ICM A;  1RQI A;  5DGN F;  1YHK A;  2Z52 A;  5ER8 A;  3WEG A;  3V1V A;  4OKM A;  1V4I A;  2ZEU A;  3RBM A;  4E1E A;  4KQU A;  5DGM F;  3KRA A;  4EA0 A;  3WCB A;  1HXC A;  5KSX F;  3AQB B;  5DHI A;  5B0I A;  1RTR A;  3WJN A;  3VJC A;  3N3D A;  3KRC A;  2RAH A;  2EWG A;  2Z4W A;  1YV5 A;  1EZF A;  2PS5 A;  3AE0 A;  5HNA A;  3M02 A;  5DIQ F;  3KRP B;  3M01 A;  2OPM A;  3WJK A;  3PDE A;  4MC8 A;  1JFA A;  5B03 A;  5B00 A;  2E94 A;  5JV1 F;  3WC9 A;  5IMI A;  3DYF A;  4KUX A;  3LVS A;  3N0G A;  4RXA A;  5B01 A;  5HN7 A;  3ACX A;  3VJA A;  4LA5 A;  4XQT F;  4F6X A;  4NFJ F;  4NUA A;  1N1B A;  2F92 F;  3KRA B;  5I1U A;  5IK6 A;  2PS8 A;  2OA6 A;  2Z50 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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3PDEA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations