1FZ0E

Methane monooxygenase hydroxylase, form ii mixed-valent grown anaerobically
Total Genus 58
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
58
sequence length
167
structure length
167
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQSP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
publication title Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site.
pubmed doi rcsb
molecule keywords METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN
total genus 58
structure length 167
sequence length 167
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2000-10-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz0E01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz0E02
1FZ4E 1MMOG 1MTYG 1FZ2E 1XVGE 1XU5E 1XMGE 1FZHE 1XU3E 1XVFE 1FZ9E 1FZ0E 4GAMC 1XVDE 1FZ3E 1FYZE 1FZIE 1XVEE 1FZ8E 1MHYG 1FZ7E 1XMFE 1XVCE 1FZ1E 1XMHE 1XVBE 1FZ5E 1FZ6E 1MHZG
chains in the Genus database with same CATH superfamily
4DTMA 4AKHA 4RG8A 1IG9A 3TABA 3RMDA 3MKSB 1FS1A 3NHGA 4RNGA 1XMGE 2FW3A 1XVFE 4E4BA 1FZ9E 4HCCA 1WAFA 4X5NA 3QNOA 4FJHA 2OZMA 3E4WA 1N1CA 2ATQA 2RCUA 4FJXA 3RWUA 2PFVA 4ADNA 3RMAA 5H37A 4EP9A 1FZ8E 2FYOA 4DTXA 1FZ7E 2OVPB 3J2PA 3N1EA 3TL8B 5IREA 3NE6A 4DTNA 3SPZA 4FJ7A 4KI6A 4KI4A 1XMFE 3N1BA 4FJ8A 2DEBA 4FK2A 4DU4A 1XMHE 1XVBE 1Q9YA 3KD1E 4FJIA 1FZ6E 3BVOA 1FPOA 2B8IA 4B08A 3WSOA 3LDBA 3L8BA 4KHNA 3SVIA 3C94A 1Q9XA 1P22A 3SCXA 4EPHA 1FZHE 4AKIA 2DY4A 4DTOA 1FZ0E 4FJ5A 3TAGA 4ADOA 2JQTA 3OGKB 1FYZE 3UIQA 4KHSA 3SQ0A 3QEVA 4ICGC 3SNNA 4I6JB 1LDKE 3HP9A 2OVRB 3UO3A 5IBKB 3QEXA 3LDSA 3C6PB 4JRQA 2E31A 3QEIA 4FJNA 3HL8A 2JHAA 3LZJA 3J27A 4FJKA 1FZ1E 2YB5A 3L2OB 3NAEA 3CFRA 1XL3C 2JPNA 3QERA 2OZSA 1FXXA 2MZWB 2LF6A 1WAJA 3SUNA 1MHZG 4KHQA 2VJ4A 4M45A 3RMBA 3SI6A 1MTYG 4FVMA 1FZ2E 3S9HA 1XVGE 2VJ5A 3C6OB 4QNDA 4JS5A 3SQ4A 3SUQA 3SUOA 3KD5E 4J2EA 3HGKE 3TJYA 4M42A 2OYQA 1CLQA 1IH7A 2PFTA 4X5MA 4DTSA 4J2BA 4DTUA 2H4TA 3CFOA 3CQ8A 2JH8A 4GAMC 4M3UA 1JW2A 1FZ3E 3L0MA 4KHUA 1XVEE 4M3WA 4M41A 4DTRA 4EYWA 3SJJA 4HCBA 2JHPA 2DTUA 3RMCA 2P5OA 2P1PB 3C6NB 3L1NA 4E3SA 2E32A 3NCIA 3SQ1A 4I9LA 4JS4A 4FJGA 4KHYA 2B1EA 3LD8A 3SQ2A 4QNCA 4DTJA 4FJMA 1NEXB 4I9QA 3SUPA 1FZ4E 1MMOG 2OVQB 2LF3A 2P1OB 4M3RA 1XU5E 4M3XA 3E4YA 2P1NB 4AI6A 4FJJA 1XU3E 2P5GA 2B7MA 4FJLA 2HD0A 3QNNA 1XVDE 1FZIE 3HGLA 3OGMB 3SPYA 4J2AA 4M3ZA 5IZ7A 2VIXA 4FJ9A 3NGIA 4FK4A 4JRPA 2QXFA 3K2OA 3NDKA 4DU1A 2P1QB 3LZIA 1MHYG 3OGLB 4RL5A 3TAFA 3V7DB 3CFPA 4IT5A 3TAEA 2K5SA 3C95A 4J2DA 4M3TA 3QEWA 3QEPA 4M3YA 3UO2A 4KHWA 1XVCE 3QESA 4FK0A 2P1MB 2MMBA 4AKGA 2MW2A 4DU3A 2JH9A 3QETA 1FZ5E 4DTPA 2JHCA 2RKHA
chains in the Genus database with same CATH topology
4DTMA 4AKHA 4RG8A 1IG9A 3TABA 3RMDA 3MKSB 1FS1A 3NHGA 4RNGA 1XMGE 2FW3A 1XVFE 4E4BA 1FZ9E 4HCCA 1WAFA 4X5NA 3QNOA 4FJHA 2OZMA 3E4WA 2ATQA 2RCUA 4FJXA 3RWUA 2PFVA 4ADNA 3RMAA 5H37A 4EP9A 1FZ8E 2FYOA 4DTXA 1FZ7E 2OVPB 3J2PA 3N1EA 3TL8B 5IREA 3NE6A 4DTNA 3SPZA 4FJ7A 4KI6A 4KI4A 1XMFE 3N1BA 4FJ8A 2DEBA 4FK2A 4DU4A 1XMHE 1XVBE 1Q9YA 3KD1E 4FJIA 1FZ6E 2B8IA 4B08A 3WSOA 3LDBA 3L8BA 4KHNA 3SVIA 3C94A 1Q9XA 1P22A 3SCXA 4EPHA 1FZHE 4AKIA 2DY4A 4DTOA 1FZ0E 4FJ5A 3TAGA 4ADOA 4KHSA 3OGKB 1FYZE 3UIQA 3SQ0A 3QEVA 3SNNA 4I6JB 1LDKE 3HP9A 2OVRB 5IBKB 3QEXA 3LDSA 3C6PB 4JRQA 2E31A 3QEIA 4FJNA 3HL8A 2JHAA 3LZJA 3J27A 4FJKA 1FZ1E 2YB5A 3L2OB 3NAEA 3CFRA 1XL3C 2JPNA 3QERA 2OZSA 1FXXA 2MZWB 2LF6A 1WAJA 3SUNA 1MHZG 4KHQA 2VJ4A 4M45A 3RMBA 3SI6A 1MTYG 4FVMA 1FZ2E 3S9HA 1XVGE 2VJ5A 3C6OB 4QNDA 4JS5A 3SQ4A 3SUQA 3SUOA 3KD5E 4J2EA 3HGKE 3TJYA 4M42A 2OYQA 1CLQA 1IH7A 2PFTA 4X5MA 4DTSA 4J2BA 4DTUA 2H4TA 3CFOA 3CQ8A 2JH8A 4GAMC 4M3UA 1FZ3E 3L0MA 4KHUA 1XVEE 4M3WA 4M41A 4DTRA 4EYWA 3SJJA 4HCBA 2JHPA 2DTUA 3RMCA 2P5OA 2P1PB 3C6NB 3L1NA 4E3SA 2E32A 3NCIA 3SQ1A 4I9LA 4JS4A 4FJGA 4KHYA 2B1EA 3LD8A 3SQ2A 4QNCA 4DTJA 4FJMA 1NEXB 4I9QA 3SUPA 1FZ4E 1MMOG 2OVQB 2LF3A 2P1OB 4M3RA 1XU5E 4M3XA 3E4YA 2P1NB 4AI6A 4FJJA 1XU3E 2P5GA 2B7MA 4FJLA 2HD0A 3QNNA 1XVDE 1FZIE 3OGMB 3SPYA 4J2AA 4M3ZA 5IZ7A 2VIXA 4FJ9A 3NGIA 4FK4A 4JRPA 2QXFA 3K2OA 3NDKA 4DU1A 2P1QB 3LZIA 1MHYG 3OGLB 4RL5A 3TAFA 3V7DB 3CFPA 3TAEA 3C95A 4J2DA 4M3TA 3QEWA 3QEPA 4M3YA 4KHWA 1XVCE 3QESA 4FK0A 2P1MB 2MMBA 4AKGA 4DU3A 2JH9A 3QETA 1FZ5E 4DTPA 2JHCA 3HGLA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FZ4 E;  1MMO G;  1MTY G;  1FZ2 E;  1XVG E;  1XU5 E;  1XMG E;  1FZH E;  1XU3 E;  1XVF E;  1FZ9 E;  1FZ0 E;  4GAM C;  1XVD E;  1FZ3 E;  1FYZ E;  1FZI E;  1XVE E;  1FZ8 E;  1MHY G;  1FZ7 E;  1XMF E;  1XVC E;  1FZ1 E;  1XMH E;  1XVB E;  1FZ5 E;  1FZ6 E;  1MHZ G; 
#chains in the Genus database with same CATH topology
 4DTM A;  4AKH A;  4RG8 A;  1IG9 A;  3TAB A;  3RMD A;  3MKS B;  1FS1 A;  3NHG A;  4RNG A;  1XMG E;  2FW3 A;  1XVF E;  4E4B A;  1FZ9 E;  4HCC A;  1WAF A;  4X5N A;  3QNO A;  4FJH A;  2OZM A;  3E4W A;  1N1C A;  2ATQ A;  2RCU A;  4FJX A;  3RWU A;  2PFV A;  4ADN A;  3RMA A;  5H37 A;  4EP9 A;  1FZ8 E;  2FYO A;  4DTX A;  1FZ7 E;  2OVP B;  3J2P A;  3N1E A;  3TL8 B;  5IRE A;  3NE6 A;  4DTN A;  3SPZ A;  4FJ7 A;  4KI6 A;  4KI4 A;  1XMF E;  3N1B A;  4FJ8 A;  2DEB A;  4FK2 A;  4DU4 A;  1XMH E;  1XVB E;  1Q9Y A;  3KD1 E;  4FJI A;  1FZ6 E;  3BVO A;  1FPO A;  2B8I A;  4B08 A;  3WSO A;  3LDB A;  3L8B A;  4KHN A;  3SVI A;  3C94 A;  1Q9X A;  1P22 A;  3SCX A;  4EPH A;  1FZH E;  4AKI A;  2DY4 A;  4DTO A;  1FZ0 E;  4FJ5 A;  3TAG A;  4ADO A;  2JQT A;  3OGK B;  1FYZ E;  3UIQ A;  4KHS A;  3SQ0 A;  3QEV A;  4ICG C;  3SNN A;  4I6J B;  1LDK E;  3HP9 A;  2OVR B;  3UO3 A;  5IBK B;  3QEX A;  3LDS A;  3C6P B;  4JRQ A;  2E31 A;  3QEI A;  4FJN A;  3HL8 A;  2JHA A;  3LZJ A;  3J27 A;  4FJK A;  1FZ1 E;  2YB5 A;  3L2O B;  3NAE A;  3CFR A;  1XL3 C;  2JPN A;  3QER A;  2OZS A;  1FXX A;  2MZW B;  2LF6 A;  1WAJ A;  3SUN A;  1MHZ G;  4KHQ A;  2VJ4 A;  4M45 A;  3RMB A;  3SI6 A;  1MTY G;  4FVM A;  1FZ2 E;  3S9H A;  1XVG E;  2VJ5 A;  3C6O B;  4QND A;  4JS5 A;  3SQ4 A;  3SUQ A;  3SUO A;  3KD5 E;  4J2E A;  3HGK E;  3TJY A;  4M42 A;  2OYQ A;  1CLQ A;  1IH7 A;  2PFT A;  4X5M A;  4DTS A;  4J2B A;  4DTU A;  2H4T A;  3CFO A;  3CQ8 A;  2JH8 A;  4GAM C;  4M3U A;  1JW2 A;  1FZ3 E;  3L0M A;  4KHU A;  1XVE E;  4M3W A;  4M41 A;  4DTR A;  4EYW A;  3SJJ A;  4HCB A;  2JHP A;  2DTU A;  3RMC A;  2P5O A;  2P1P B;  3C6N B;  3L1N A;  4E3S A;  2E32 A;  3NCI A;  3SQ1 A;  4I9L A;  4JS4 A;  4FJG A;  4KHY A;  2B1E A;  3LD8 A;  3SQ2 A;  4QNC A;  4DTJ A;  4FJM A;  1NEX B;  4I9Q A;  3SUP A;  1FZ4 E;  1MMO G;  2OVQ B;  2LF3 A;  2P1O B;  4M3R A;  1XU5 E;  4M3X A;  3E4Y A;  2P1N B;  4AI6 A;  4FJJ A;  1XU3 E;  2P5G A;  2B7M A;  4FJL A;  2HD0 A;  3QNN A;  1XVD E;  1FZI E;  3HGL A;  3OGM B;  3SPY A;  4J2A A;  4M3Z A;  5IZ7 A;  2VIX A;  4FJ9 A;  3NGI A;  4FK4 A;  4JRP A;  2QXF A;  3K2O A;  3NDK A;  4DU1 A;  2P1Q B;  3LZI A;  1MHY G;  3OGL B;  4RL5 A;  3TAF A;  3V7D B;  3CFP A;  4IT5 A;  3TAE A;  2K5S A;  3C95 A;  4J2D A;  4M3T A;  3QEW A;  3QEP A;  4M3Y A;  3UO2 A;  4KHW A;  1XVC E;  3QES A;  4FK0 A;  2P1M B;  2MMB A;  4AKG A;  2MW2 A;  4DU3 A;  2JH9 A;  3QET A;  1FZ5 E;  4DTP A;  2JHC A;  2RKH A; 
#chains in the Genus database with same CATH homology
 4DTM A;  4AKH A;  4RG8 A;  1IG9 A;  3TAB A;  3RMD A;  3MKS B;  1FS1 A;  3NHG A;  4RNG A;  1XMG E;  2FW3 A;  1XVF E;  4E4B A;  1FZ9 E;  4HCC A;  1WAF A;  4X5N A;  3QNO A;  4FJH A;  2OZM A;  3E4W A;  2ATQ A;  2RCU A;  4FJX A;  3RWU A;  2PFV A;  4ADN A;  3RMA A;  5H37 A;  4EP9 A;  1FZ8 E;  2FYO A;  4DTX A;  1FZ7 E;  2OVP B;  3J2P A;  3N1E A;  3TL8 B;  5IRE A;  3NE6 A;  4DTN A;  3SPZ A;  4FJ7 A;  4KI6 A;  4KI4 A;  1XMF E;  3N1B A;  4FJ8 A;  2DEB A;  4FK2 A;  4DU4 A;  1XMH E;  1XVB E;  1Q9Y A;  3KD1 E;  4FJI A;  1FZ6 E;  2B8I A;  4B08 A;  3WSO A;  3LDB A;  3L8B A;  4KHN A;  3SVI A;  3C94 A;  1Q9X A;  1P22 A;  3SCX A;  4EPH A;  1FZH E;  4AKI A;  2DY4 A;  4DTO A;  1FZ0 E;  4FJ5 A;  3TAG A;  4ADO A;  4KHS A;  3OGK B;  1FYZ E;  3UIQ A;  3SQ0 A;  3QEV A;  3SNN A;  4I6J B;  1LDK E;  3HP9 A;  2OVR B;  5IBK B;  3QEX A;  3LDS A;  3C6P B;  4JRQ A;  2E31 A;  3QEI A;  4FJN A;  3HL8 A;  2JHA A;  3LZJ A;  3J27 A;  4FJK A;  1FZ1 E;  2YB5 A;  3L2O B;  3NAE A;  3CFR A;  1XL3 C;  2JPN A;  3QER A;  2OZS A;  1FXX A;  2MZW B;  2LF6 A;  1WAJ A;  3SUN A;  1MHZ G;  4KHQ A;  2VJ4 A;  4M45 A;  3RMB A;  3SI6 A;  1MTY G;  4FVM A;  1FZ2 E;  3S9H A;  1XVG E;  2VJ5 A;  3C6O B;  4QND A;  4JS5 A;  3SQ4 A;  3SUQ A;  3SUO A;  3KD5 E;  4J2E A;  3HGK E;  3TJY A;  4M42 A;  2OYQ A;  1CLQ A;  1IH7 A;  2PFT A;  4X5M A;  4DTS A;  4J2B A;  4DTU A;  2H4T A;  3CFO A;  3CQ8 A;  2JH8 A;  4GAM C;  4M3U A;  1FZ3 E;  3L0M A;  4KHU A;  1XVE E;  4M3W A;  4M41 A;  4DTR A;  4EYW A;  3SJJ A;  4HCB A;  2JHP A;  2DTU A;  3RMC A;  2P5O A;  2P1P B;  3C6N B;  3L1N A;  4E3S A;  2E32 A;  3NCI A;  3SQ1 A;  4I9L A;  4JS4 A;  4FJG A;  4KHY A;  2B1E A;  3LD8 A;  3SQ2 A;  4QNC A;  4DTJ A;  4FJM A;  1NEX B;  4I9Q A;  3SUP A;  1FZ4 E;  1MMO G;  2OVQ B;  2LF3 A;  2P1O B;  4M3R A;  1XU5 E;  4M3X A;  3E4Y A;  2P1N B;  4AI6 A;  4FJJ A;  1XU3 E;  2P5G A;  2B7M A;  4FJL A;  2HD0 A;  3QNN A;  1XVD E;  1FZI E;  3OGM B;  3SPY A;  4J2A A;  4M3Z A;  5IZ7 A;  2VIX A;  4FJ9 A;  3NGI A;  4FK4 A;  4JRP A;  2QXF A;  3K2O A;  3NDK A;  4DU1 A;  2P1Q B;  3LZI A;  1MHY G;  3OGL B;  4RL5 A;  3TAF A;  3V7D B;  3CFP A;  3TAE A;  3C95 A;  4J2D A;  4M3T A;  3QEW A;  3QEP A;  4M3Y A;  4KHW A;  1XVC E;  3QES A;  4FK0 A;  2P1M B;  2MMB A;  4AKG A;  4DU3 A;  2JH9 A;  3QET A;  1FZ5 E;  4DTP A;  2JHC A;  3HGL A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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