1FZ2E

Methane monooxygenase hydroxylase, form ii mixed-valent generated by crystal soaking
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
167
structure length
167
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQSP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
publication title Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site.
pubmed doi rcsb
molecule keywords METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN
total genus 61
structure length 167
sequence length 167
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2000-10-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz2E01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz2E02
1FZ2E 1MTYG 1MMOG 1XVFE 1FZIE 1FZ4E 1FZHE 1XMGE 1FZ1E 1FZ5E 1XVCE 1XMHE 1FZ3E 1FZ6E 1FZ0E 1MHZG 1FZ7E 1FZ8E 1XVBE 1XU5E 1XVDE 1FYZE 1XMFE 4GAMC 1FZ9E 1XVEE 1XVGE 1MHYG 1XU3E
chains in the Genus database with same CATH superfamily
4I9QA 2MW2A 1MTYG 3HGLA 4FJNA 3NAEA 4JRQA 3KD1E 3MKSB 2VJ4A 4JS5A 4KI6A 2ATQA 2DEBA 2RCUA 4X5MA 3LZJA 3SQ2A 3SQ0A 1FPOA 3CFPA 2OZMA 3NHGA 4HCBA 1FZ0E 3J2PA 3TABA 1JW2A 2OVQB 1IG9A 4JRPA 1XVBE 4KHSA 4FJ7A 2VIXA 4M3WA 2JHCA 1XMFE 4EPHA 4DTMA 3C6NB 4I6JB 4M3XA 3QEIA 2JHPA 3HP9A 3SNNA 4AKHA 4FJ8A 3QEWA 3K2OA 1FXXA 4DU4A 3HGKE 3OGLB 3QNOA 1XL3C 3TAGA 4FJ5A 4FJHA 3SUNA 5IREA 3NGIA 4J2BA 3NDKA 4FJKA 4DTSA 2OVRB 3SPYA 4M42A 2B8IA 4FJJA 1FZ4E 3NCIA 3RMCA 1CLQA 1XMGE 4M45A 2E31A 3RMAA 3N1EA 3SCXA 3BVOA 2JH9A 2B7MA 4DU1A 4KHQA 1LDKE 1FZ6E 3L0MA 2JQTA 4EYWA 4KI4A 1MHZG 2JH8A 3L1NA 3TJYA 4AKGA 4KHNA 4FJMA 3RWUA 4M3ZA 2JHAA 2MZWB 3SQ4A 3C94A 1FYZE 2QXFA 3KD5E 5H37A 4GAMC 4DU3A 3HL8A 2YB5A 2E32A 3TAFA 2B1EA 2RKHA 3CFRA 3C6PB 1XVGE 5IZ7A 3LD8A 1XU3E 3CQ8A 4AKIA 2LF3A 1FZ2E 3L8BA 4JS4A 3E4YA 4QNDA 4M41A 3QERA 1MMOG 3TAEA 1FZIE 1WAJA 4DTRA 2P1NB 4IT5A 4FVMA 2P5GA 2VJ5A 3J27A 3N1BA 3LDSA 3RMDA 2HD0A 2OZSA 4J2AA 4KHWA 1XVCE 4FK2A 3QNNA 2PFTA 1FZ3E 2OVPB 4FJXA 4M3TA 3SUOA 4J2EA 2P1PB 3L2OB 4FJGA 4FJ9A 1FZ8E 4M3YA 1XU5E 4ICGC 4RL5A 2P1MB 3UO2A 3SUQA 4AI6A 4M3RA 4B08A 4DTUA 2DTUA 4RNGA 3TL8B 1Q9XA 1WAFA 1FZ9E 4QNCA 1XVEE 3UIQA 2MMBA 3SVIA 3QEPA 4DTOA 4J2DA 2P1OB 3OGKB 4EP9A 3C6OB 3WSOA 4E3SA 3RMBA 1MHYG 3SUPA 1N1CA 3LDBA 3QETA 3SPZA 4FK4A 3LZIA 4RG8A 3NE6A 2DY4A 4M3UA 1XVFE 4ADNA 3CFOA 3OGMB 2OYQA 3SJJA 3SI6A 1FZHE 1FZ1E 1FZ5E 2K5SA 1FS1A 4E4BA 3QESA 4X5NA 4ADOA 1XMHE 4FJIA 3C95A 3QEXA 3QEVA 1NEXB 1FZ7E 2PFVA 2LF6A 3V7DB 5IBKB 4DTXA 1XVDE 2FYOA 4KHYA 3S9HA 4DTPA 1P22A 4DTNA 4KHUA 1IH7A 4I9LA 2P1QB 3E4WA 3UO3A 4DTJA 1Q9YA 4FK0A 2P5OA 2H4TA 4HCCA 4FJLA 2FW3A 2JPNA 3SQ1A
chains in the Genus database with same CATH topology
4I9QA 1MTYG 3HGLA 4FJNA 3NAEA 4JRQA 3KD1E 3MKSB 2VJ4A 4JS5A 4KI6A 2ATQA 2DEBA 2RCUA 4X5MA 3LZJA 3SQ2A 3SQ0A 3CFPA 2OZMA 3NHGA 4HCBA 1FZ0E 3J2PA 3TABA 2OVQB 1IG9A 4JRPA 1XVBE 4KHSA 4FJ7A 2VIXA 4M3WA 2JHCA 1XMFE 4EPHA 4DTMA 3C6NB 4I6JB 4M3XA 3QEIA 2JHPA 3HP9A 3SNNA 4AKHA 4FJ8A 3QEWA 3K2OA 1FXXA 4DU4A 3HGKE 3OGLB 3QNOA 1XL3C 3TAGA 4FJ5A 4FJHA 3SUNA 5IREA 3NGIA 4J2BA 3NDKA 4FJKA 4DTSA 2OVRB 3SPYA 4M42A 2B8IA 4FJJA 1FZ4E 3NCIA 3RMCA 1CLQA 1XMGE 4M45A 2E31A 3RMAA 3N1EA 3SCXA 2JH9A 2B7MA 4DU1A 4KHQA 1LDKE 1FZ6E 3L0MA 4EYWA 4KI4A 1MHZG 2JH8A 3L1NA 3TJYA 4AKGA 4KHNA 4FJMA 3RWUA 4M3ZA 2JHAA 2MZWB 3SQ4A 3C94A 1FYZE 2QXFA 3KD5E 5H37A 4GAMC 4DU3A 3HL8A 2YB5A 2E32A 3TAFA 2B1EA 3CFRA 3C6PB 1XVGE 5IZ7A 3LD8A 1XU3E 3CQ8A 4AKIA 2LF3A 1FZ2E 3L8BA 4JS4A 3E4YA 4QNDA 4M41A 3QERA 1MMOG 3TAEA 1FZIE 1WAJA 4DTRA 2P1NB 4FVMA 2P5GA 2VJ5A 3J27A 3N1BA 3LDSA 3RMDA 2HD0A 2OZSA 4J2AA 4KHWA 1XVCE 4FK2A 3QNNA 2PFTA 1FZ3E 2OVPB 4FJXA 4M3TA 3SUOA 4J2EA 2P1PB 3L2OB 4FJGA 4FJ9A 1FZ8E 4M3YA 1XU5E 4RL5A 2P1MB 3SUQA 4AI6A 4M3RA 4B08A 4DTUA 2DTUA 4RNGA 3TL8B 1Q9XA 1WAFA 1FZ9E 4QNCA 1XVEE 3UIQA 2MMBA 3SVIA 3QEPA 4DTOA 4J2DA 2P1OB 3OGKB 4EP9A 3C6OB 3WSOA 4E3SA 3RMBA 1MHYG 3SUPA 3LDBA 3QETA 3SPZA 4FK4A 3LZIA 4RG8A 3NE6A 2DY4A 4M3UA 1XVFE 4ADNA 3CFOA 3OGMB 2OYQA 3SJJA 3SI6A 1FZHE 1FZ1E 1FZ5E 1FS1A 4E4BA 3QESA 4X5NA 4ADOA 1XMHE 4FJIA 3C95A 3QEXA 3QEVA 1NEXB 1FZ7E 2PFVA 2LF6A 3V7DB 5IBKB 4DTXA 1XVDE 2FYOA 4KHYA 3S9HA 4DTPA 1P22A 4DTNA 4KHUA 1IH7A 4I9LA 2P1QB 3E4WA 4DTJA 1Q9YA 4FK0A 2P5OA 2H4TA 4HCCA 4FJLA 2FW3A 2JPNA 3SQ1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FZ2 E;  1MTY G;  1MMO G;  1XVF E;  1FZI E;  1FZ4 E;  1FZH E;  1XMG E;  1FZ1 E;  1FZ5 E;  1XVC E;  1XMH E;  1FZ3 E;  1FZ6 E;  1FZ0 E;  1MHZ G;  1FZ7 E;  1FZ8 E;  1XVB E;  1XU5 E;  1XVD E;  1FYZ E;  1XMF E;  4GAM C;  1FZ9 E;  1XVE E;  1XVG E;  1MHY G;  1XU3 E; 
#chains in the Genus database with same CATH topology
 4I9Q A;  2MW2 A;  1MTY G;  3HGL A;  4FJN A;  3NAE A;  4JRQ A;  3KD1 E;  3MKS B;  2VJ4 A;  4JS5 A;  4KI6 A;  2ATQ A;  2DEB A;  2RCU A;  4X5M A;  3LZJ A;  3SQ2 A;  3SQ0 A;  1FPO A;  3CFP A;  2OZM A;  3NHG A;  4HCB A;  1FZ0 E;  3J2P A;  3TAB A;  1JW2 A;  2OVQ B;  1IG9 A;  4JRP A;  1XVB E;  4KHS A;  4FJ7 A;  2VIX A;  4M3W A;  2JHC A;  1XMF E;  4EPH A;  4DTM A;  3C6N B;  4I6J B;  4M3X A;  3QEI A;  2JHP A;  3HP9 A;  3SNN A;  4AKH A;  4FJ8 A;  3QEW A;  3K2O A;  1FXX A;  4DU4 A;  3HGK E;  3OGL B;  3QNO A;  1XL3 C;  3TAG A;  4FJ5 A;  4FJH A;  3SUN A;  5IRE A;  3NGI A;  4J2B A;  3NDK A;  4FJK A;  4DTS A;  2OVR B;  3SPY A;  4M42 A;  2B8I A;  4FJJ A;  1FZ4 E;  3NCI A;  3RMC A;  1CLQ A;  1XMG E;  4M45 A;  2E31 A;  3RMA A;  3N1E A;  3SCX A;  3BVO A;  2JH9 A;  2B7M A;  4DU1 A;  4KHQ A;  1LDK E;  1FZ6 E;  3L0M A;  2JQT A;  4EYW A;  4KI4 A;  1MHZ G;  2JH8 A;  3L1N A;  3TJY A;  4AKG A;  4KHN A;  4FJM A;  3RWU A;  4M3Z A;  2JHA A;  2MZW B;  3SQ4 A;  3C94 A;  1FYZ E;  2QXF A;  3KD5 E;  5H37 A;  4GAM C;  4DU3 A;  3HL8 A;  2YB5 A;  2E32 A;  3TAF A;  2B1E A;  2RKH A;  3CFR A;  3C6P B;  1XVG E;  5IZ7 A;  3LD8 A;  1XU3 E;  3CQ8 A;  4AKI A;  2LF3 A;  1FZ2 E;  3L8B A;  4JS4 A;  3E4Y A;  4QND A;  4M41 A;  3QER A;  1MMO G;  3TAE A;  1FZI E;  1WAJ A;  4DTR A;  2P1N B;  4IT5 A;  4FVM A;  2P5G A;  2VJ5 A;  3J27 A;  3N1B A;  3LDS A;  3RMD A;  2HD0 A;  2OZS A;  4J2A A;  4KHW A;  1XVC E;  4FK2 A;  3QNN A;  2PFT A;  1FZ3 E;  2OVP B;  4FJX A;  4M3T A;  3SUO A;  4J2E A;  2P1P B;  3L2O B;  4FJG A;  4FJ9 A;  1FZ8 E;  4M3Y A;  1XU5 E;  4ICG C;  4RL5 A;  2P1M B;  3UO2 A;  3SUQ A;  4AI6 A;  4M3R A;  4B08 A;  4DTU A;  2DTU A;  4RNG A;  3TL8 B;  1Q9X A;  1WAF A;  1FZ9 E;  4QNC A;  1XVE E;  3UIQ A;  2MMB A;  3SVI A;  3QEP A;  4DTO A;  4J2D A;  2P1O B;  3OGK B;  4EP9 A;  3C6O B;  3WSO A;  4E3S A;  3RMB A;  1MHY G;  3SUP A;  1N1C A;  3LDB A;  3QET A;  3SPZ A;  4FK4 A;  3LZI A;  4RG8 A;  3NE6 A;  2DY4 A;  4M3U A;  1XVF E;  4ADN A;  3CFO A;  3OGM B;  2OYQ A;  3SJJ A;  3SI6 A;  1FZH E;  1FZ1 E;  1FZ5 E;  2K5S A;  1FS1 A;  4E4B A;  3QES A;  4X5N A;  4ADO A;  1XMH E;  4FJI A;  3C95 A;  3QEX A;  3QEV A;  1NEX B;  1FZ7 E;  2PFV A;  2LF6 A;  3V7D B;  5IBK B;  4DTX A;  1XVD E;  2FYO A;  4KHY A;  3S9H A;  4DTP A;  1P22 A;  4DTN A;  4KHU A;  1IH7 A;  4I9L A;  2P1Q B;  3E4W A;  3UO3 A;  4DTJ A;  1Q9Y A;  4FK0 A;  2P5O A;  2H4T A;  4HCC A;  4FJL A;  2FW3 A;  2JPN A;  3SQ1 A; 
#chains in the Genus database with same CATH homology
 4I9Q A;  1MTY G;  3HGL A;  4FJN A;  3NAE A;  4JRQ A;  3KD1 E;  3MKS B;  2VJ4 A;  4JS5 A;  4KI6 A;  2ATQ A;  2DEB A;  2RCU A;  4X5M A;  3LZJ A;  3SQ2 A;  3SQ0 A;  3CFP A;  2OZM A;  3NHG A;  4HCB A;  1FZ0 E;  3J2P A;  3TAB A;  2OVQ B;  1IG9 A;  4JRP A;  1XVB E;  4KHS A;  4FJ7 A;  2VIX A;  4M3W A;  2JHC A;  1XMF E;  4EPH A;  4DTM A;  3C6N B;  4I6J B;  4M3X A;  3QEI A;  2JHP A;  3HP9 A;  3SNN A;  4AKH A;  4FJ8 A;  3QEW A;  3K2O A;  1FXX A;  4DU4 A;  3HGK E;  3OGL B;  3QNO A;  1XL3 C;  3TAG A;  4FJ5 A;  4FJH A;  3SUN A;  5IRE A;  3NGI A;  4J2B A;  3NDK A;  4FJK A;  4DTS A;  2OVR B;  3SPY A;  4M42 A;  2B8I A;  4FJJ A;  1FZ4 E;  3NCI A;  3RMC A;  1CLQ A;  1XMG E;  4M45 A;  2E31 A;  3RMA A;  3N1E A;  3SCX A;  2JH9 A;  2B7M A;  4DU1 A;  4KHQ A;  1LDK E;  1FZ6 E;  3L0M A;  4EYW A;  4KI4 A;  1MHZ G;  2JH8 A;  3L1N A;  3TJY A;  4AKG A;  4KHN A;  4FJM A;  3RWU A;  4M3Z A;  2JHA A;  2MZW B;  3SQ4 A;  3C94 A;  1FYZ E;  2QXF A;  3KD5 E;  5H37 A;  4GAM C;  4DU3 A;  3HL8 A;  2YB5 A;  2E32 A;  3TAF A;  2B1E A;  3CFR A;  3C6P B;  1XVG E;  5IZ7 A;  3LD8 A;  1XU3 E;  3CQ8 A;  4AKI A;  2LF3 A;  1FZ2 E;  3L8B A;  4JS4 A;  3E4Y A;  4QND A;  4M41 A;  3QER A;  1MMO G;  3TAE A;  1FZI E;  1WAJ A;  4DTR A;  2P1N B;  4FVM A;  2P5G A;  2VJ5 A;  3J27 A;  3N1B A;  3LDS A;  3RMD A;  2HD0 A;  2OZS A;  4J2A A;  4KHW A;  1XVC E;  4FK2 A;  3QNN A;  2PFT A;  1FZ3 E;  2OVP B;  4FJX A;  4M3T A;  3SUO A;  4J2E A;  2P1P B;  3L2O B;  4FJG A;  4FJ9 A;  1FZ8 E;  4M3Y A;  1XU5 E;  4RL5 A;  2P1M B;  3SUQ A;  4AI6 A;  4M3R A;  4B08 A;  4DTU A;  2DTU A;  4RNG A;  3TL8 B;  1Q9X A;  1WAF A;  1FZ9 E;  4QNC A;  1XVE E;  3UIQ A;  2MMB A;  3SVI A;  3QEP A;  4DTO A;  4J2D A;  2P1O B;  3OGK B;  4EP9 A;  3C6O B;  3WSO A;  4E3S A;  3RMB A;  1MHY G;  3SUP A;  3LDB A;  3QET A;  3SPZ A;  4FK4 A;  3LZI A;  4RG8 A;  3NE6 A;  2DY4 A;  4M3U A;  1XVF E;  4ADN A;  3CFO A;  3OGM B;  2OYQ A;  3SJJ A;  3SI6 A;  1FZH E;  1FZ1 E;  1FZ5 E;  1FS1 A;  4E4B A;  3QES A;  4X5N A;  4ADO A;  1XMH E;  4FJI A;  3C95 A;  3QEX A;  3QEV A;  1NEX B;  1FZ7 E;  2PFV A;  2LF6 A;  3V7D B;  5IBK B;  4DTX A;  1XVD E;  2FYO A;  4KHY A;  3S9H A;  4DTP A;  1P22 A;  4DTN A;  4KHU A;  1IH7 A;  4I9L A;  2P1Q B;  3E4W A;  4DTJ A;  1Q9Y A;  4FK0 A;  2P5O A;  2H4T A;  4HCC A;  4FJL A;  2FW3 A;  2JPN A;  3SQ1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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