1XVGE

Soluble methane monooxygenase hydroxylase: bromoethanol soaked structure
Total Genus 61
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
166
structure length
166
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Oxidoreductase
molecule keywords Methane monooxygenase component A alpha chain
publication title Product Bound Structures of the Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath): Protein Motion in the Alpha-Subunit
pubmed doi rcsb
total genus 61
structure length 166
sequence length 166
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2004-10-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1xvgE01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1xvgE02
1FZ3E 1XU5E 1FZ0E 1FZ4E 1FZ2E 1MHZG 1FZ5E 1XMFE 1FZ1E 1MTYG 4GAMC 1FZ7E 1FZ8E 1XMGE 1XVBE 1XVFE 1FZIE 1FZ9E 1MMOG 1XU3E 1XVGE 1XMHE 1FYZE 1XVDE 1MHYG 1FZ6E 1FZHE 1XVEE 1XVCE
chains in the Genus database with same CATH superfamily
4KI6A 2MZWB 3L8BA 2JH9A 1FZ4E 2OVRB 1WAFA 2OVPB 4DTMA 3QESA 4FVMA 1XMFE 4I9QA 1FZ1E 2YB5A 3E4WA 3SUNA 3TJYA 3UIQA 4FK0A 1FZ8E 3TAEA 1XMGE 4AI6A 4DU1A 2B1EA 4X5MA 4EYWA 4KHYA 3C95A 3L2OB 4M41A 4DU4A 3NDKA 4M3ZA 1IG9A 3SQ4A 2ATQA 2FW3A 4DTRA 2VJ5A 4QNDA 2B8IA 4HCCA 4FJKA 2P1NB 3SPZA 4DTOA 4AKGA 3SUOA 4KHWA 3OGLB 4JRPA 3E4YA 4ADNA 4DU3A 4FJNA 2LF6A 1FZ3E 4RL5A 3CQ8A 3TAFA 2K5SA 1MHZG 3J27A 3LZJA 3QEIA 2P5GA 4FJMA 4J2DA 4M3XA 2JPNA 4M3YA 1CLQA 3L0MA 3CFOA 4DTNA 1MTYG 2PFTA 4EPHA 3SVIA 4JS5A 3QETA 1FXXA 2VIXA 1FZ7E 3OGKB 2B7MA 3RMDA 3SQ1A 2MMBA 4DTXA 4J2EA 2FYOA 4FJ7A 3RMCA 2RKHA 3SPYA 3HP9A 3NCIA 3S9HA 1Q9YA 3RWUA 4FJHA 3N1EA 3QNOA 4HCBA 4M3TA 4FK4A 1LDKE 3RMAA 1FS1A 1N1CA 3J2PA 4KHSA 2DEBA 2HD0A 3SQ2A 1XVDE 2LF3A 3C6NB 1MHYG 2JH8A 2JHCA 1FZ6E 1FZHE 1XVEE 3LD8A 3V7DB 2OYQA 4J2BA 3SNNA 1XU5E 1FZ0E 4E3SA 3LDBA 5IZ7A 2P1MB 4DTSA 4JS4A 3K2OA 4E4BA 4FJ9A 3QNNA 2H4TA 2QXFA 3C6OB 4DTPA 4J2AA 4FK2A 3NGIA 2OVQB 4JRQA 2DTUA 3RMBA 4I6JB 2JHAA 3HGKE 3SUPA 1XVBE 1XVFE 4I9LA 3NE6A 3LDSA 2E32A 4B08A 4ADOA 1P22A 3NAEA 4FJJA 4M42A 2P1QB 2P5OA 3UO3A 1FZ9E 3SJJA 3KD1E 2JHPA 4M3UA 3QEWA 1XVGE 1XMHE 4M45A 5IREA 1FYZE 2PFVA 4DTJA 3CFPA 4KHQA 1FZ5E 3HGLA 2MW2A 2E31A 3WSOA 3QEPA 3CFRA 4FJGA 4KHNA 1FPOA 3SUQA 1Q9XA 1IH7A 4FJ5A 1XL3C 1FZ2E 4ICGC 3TABA 3QEVA 4RG8A 1NEXB 4AKHA 3QERA 3BVOA 3QEXA 4GAMC 2OZSA 3MKSB 3TL8B 3C6PB 2P1OB 3HL8A 4FJLA 3SQ0A 4QNCA 4FJXA 5IBKB 5H37A 4RNGA 4M3RA 3SCXA 2OZMA 3KD5E 1JW2A 4IT5A 2VJ4A 2P1PB 4X5NA 4KHUA 4DTUA 1FZIE 4KI4A 4M3WA 1WAJA 3NHGA 1MMOG 3OGMB 2DY4A 3TAGA 3N1BA 1XU3E 4EP9A 4AKIA 4FJ8A 3UO2A 3C94A 3LZIA 2RCUA 3L1NA 3SI6A 2JQTA 1XVCE 4FJIA
chains in the Genus database with same CATH topology
4KI6A 2MZWB 3L8BA 2JH9A 1FZ4E 2OVRB 1WAFA 2OVPB 4DTMA 3QESA 4FVMA 1XMFE 4I9QA 1FZ1E 2YB5A 3E4WA 3SUNA 3TJYA 3UIQA 4FK0A 1FZ8E 3TAEA 1XMGE 4AI6A 4DU1A 2B1EA 4X5MA 4EYWA 4KHYA 3C95A 3L2OB 4M41A 4DU4A 3NDKA 4M3ZA 1IG9A 3SQ4A 2ATQA 2FW3A 4DTRA 2VJ5A 4QNDA 2B8IA 4HCCA 4FJKA 2P1NB 3SPZA 4DTOA 4AKGA 3SUOA 4KHWA 3OGLB 4JRPA 3E4YA 4ADNA 4DU3A 4FJNA 2LF6A 1FZ3E 4RL5A 3CQ8A 3TAFA 3QEIA 1MHZG 3J27A 3LZJA 2P5GA 4FJMA 4J2DA 4M3XA 2JPNA 4M3YA 1CLQA 3L0MA 3CFOA 4DTNA 1MTYG 2PFTA 4EPHA 3SVIA 4JS5A 3QETA 1FXXA 2VIXA 1FZ7E 3OGKB 2B7MA 3RMDA 3SQ1A 2MMBA 4DTXA 4J2EA 2FYOA 4FJ7A 3RMCA 3SPYA 3HP9A 3NCIA 3S9HA 1Q9YA 3RWUA 4FJHA 3N1EA 3QNOA 4HCBA 4M3TA 4FK4A 1LDKE 3RMAA 1FS1A 3J2PA 4KHSA 2DEBA 2HD0A 3SQ2A 1XVDE 2LF3A 3C6NB 1MHYG 2JH8A 2JHCA 1FZ6E 1FZHE 1XVEE 3LD8A 3V7DB 2OYQA 4J2BA 3SNNA 1XU5E 1FZ0E 4E3SA 3LDBA 5IZ7A 2P1MB 4DTSA 4JS4A 3K2OA 4E4BA 4FJ9A 3QNNA 2H4TA 2QXFA 3C6OB 4DTPA 4J2AA 4FK2A 3NGIA 2OVQB 4JRQA 2DTUA 3RMBA 4I6JB 2JHAA 3HGKE 3SUPA 1XVBE 1XVFE 4I9LA 3NE6A 3LDSA 2E32A 4B08A 4ADOA 1P22A 3NAEA 4FJJA 4M42A 2P1QB 2P5OA 1FZ9E 3SJJA 3KD1E 2JHPA 4M3UA 3QEWA 1XVGE 1XMHE 4M45A 5IREA 1FYZE 2PFVA 4DTJA 3CFPA 4KHQA 1FZ5E 3HGLA 3WSOA 2E31A 3QEPA 4FJGA 3CFRA 4KHNA 3SUQA 1Q9XA 1IH7A 4FJ5A 1XL3C 1FZ2E 3TABA 3QEVA 4RG8A 1NEXB 4AKHA 3QERA 3QEXA 2OZSA 4GAMC 3MKSB 3TL8B 3C6PB 2P1OB 3HL8A 4FJLA 3SQ0A 4QNCA 4FJXA 5IBKB 5H37A 4RNGA 4M3RA 3SCXA 2OZMA 3KD5E 2VJ4A 2P1PB 4X5NA 4KHUA 4DTUA 1FZIE 4KI4A 4M3WA 1WAJA 3NHGA 1MMOG 3OGMB 2DY4A 3TAGA 3N1BA 1XU3E 4EP9A 4AKIA 4FJ8A 3C94A 3LZIA 2RCUA 3L1NA 3SI6A 1XVCE 4FJIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FZ3 E;  1XU5 E;  1FZ0 E;  1FZ4 E;  1FZ2 E;  1MHZ G;  1FZ5 E;  1XMF E;  1FZ1 E;  1MTY G;  4GAM C;  1FZ7 E;  1FZ8 E;  1XMG E;  1XVB E;  1XVF E;  1FZI E;  1FZ9 E;  1MMO G;  1XU3 E;  1XVG E;  1XMH E;  1FYZ E;  1XVD E;  1MHY G;  1FZ6 E;  1FZH E;  1XVE E;  1XVC E; 
#chains in the Genus database with same CATH topology
 4KI6 A;  2MZW B;  3L8B A;  2JH9 A;  1FZ4 E;  2OVR B;  1WAF A;  2OVP B;  4DTM A;  3QES A;  4FVM A;  1XMF E;  4I9Q A;  1FZ1 E;  2YB5 A;  3E4W A;  3SUN A;  3TJY A;  3UIQ A;  4FK0 A;  1FZ8 E;  3TAE A;  1XMG E;  4AI6 A;  4DU1 A;  2B1E A;  4X5M A;  4EYW A;  4KHY A;  3C95 A;  3L2O B;  4M41 A;  4DU4 A;  3NDK A;  4M3Z A;  1IG9 A;  3SQ4 A;  2ATQ A;  2FW3 A;  4DTR A;  2VJ5 A;  4QND A;  2B8I A;  4HCC A;  4FJK A;  2P1N B;  3SPZ A;  4DTO A;  4AKG A;  3SUO A;  4KHW A;  3OGL B;  4JRP A;  3E4Y A;  4ADN A;  4DU3 A;  4FJN A;  2LF6 A;  1FZ3 E;  4RL5 A;  3CQ8 A;  3TAF A;  2K5S A;  1MHZ G;  3J27 A;  3LZJ A;  3QEI A;  2P5G A;  4FJM A;  4J2D A;  4M3X A;  2JPN A;  4M3Y A;  1CLQ A;  3L0M A;  3CFO A;  4DTN A;  1MTY G;  2PFT A;  4EPH A;  3SVI A;  4JS5 A;  3QET A;  1FXX A;  2VIX A;  1FZ7 E;  3OGK B;  2B7M A;  3RMD A;  3SQ1 A;  2MMB A;  4DTX A;  4J2E A;  2FYO A;  4FJ7 A;  3RMC A;  2RKH A;  3SPY A;  3HP9 A;  3NCI A;  3S9H A;  1Q9Y A;  3RWU A;  4FJH A;  3N1E A;  3QNO A;  4HCB A;  4M3T A;  4FK4 A;  1LDK E;  3RMA A;  1FS1 A;  1N1C A;  3J2P A;  4KHS A;  2DEB A;  2HD0 A;  3SQ2 A;  1XVD E;  2LF3 A;  3C6N B;  1MHY G;  2JH8 A;  2JHC A;  1FZ6 E;  1FZH E;  1XVE E;  3LD8 A;  3V7D B;  2OYQ A;  4J2B A;  3SNN A;  1XU5 E;  1FZ0 E;  4E3S A;  3LDB A;  5IZ7 A;  2P1M B;  4DTS A;  4JS4 A;  3K2O A;  4E4B A;  4FJ9 A;  3QNN A;  2H4T A;  2QXF A;  3C6O B;  4DTP A;  4J2A A;  4FK2 A;  3NGI A;  2OVQ B;  4JRQ A;  2DTU A;  3RMB A;  4I6J B;  2JHA A;  3HGK E;  3SUP A;  1XVB E;  1XVF E;  4I9L A;  3NE6 A;  3LDS A;  2E32 A;  4B08 A;  4ADO A;  1P22 A;  3NAE A;  4FJJ A;  4M42 A;  2P1Q B;  2P5O A;  3UO3 A;  1FZ9 E;  3SJJ A;  3KD1 E;  2JHP A;  4M3U A;  3QEW A;  1XVG E;  1XMH E;  4M45 A;  5IRE A;  1FYZ E;  2PFV A;  4DTJ A;  3CFP A;  4KHQ A;  1FZ5 E;  3HGL A;  2MW2 A;  2E31 A;  3WSO A;  3QEP A;  3CFR A;  4FJG A;  4KHN A;  1FPO A;  3SUQ A;  1Q9X A;  1IH7 A;  4FJ5 A;  1XL3 C;  1FZ2 E;  4ICG C;  3TAB A;  3QEV A;  4RG8 A;  1NEX B;  4AKH A;  3QER A;  3BVO A;  3QEX A;  4GAM C;  2OZS A;  3MKS B;  3TL8 B;  3C6P B;  2P1O B;  3HL8 A;  4FJL A;  3SQ0 A;  4QNC A;  4FJX A;  5IBK B;  5H37 A;  4RNG A;  4M3R A;  3SCX A;  2OZM A;  3KD5 E;  1JW2 A;  4IT5 A;  2VJ4 A;  2P1P B;  4X5N A;  4KHU A;  4DTU A;  1FZI E;  4KI4 A;  4M3W A;  1WAJ A;  3NHG A;  1MMO G;  3OGM B;  2DY4 A;  3TAG A;  3N1B A;  1XU3 E;  4EP9 A;  4AKI A;  4FJ8 A;  3UO2 A;  3C94 A;  3LZI A;  2RCU A;  3L1N A;  3SI6 A;  2JQT A;  1XVC E;  4FJI A; 
#chains in the Genus database with same CATH homology
 4KI6 A;  2MZW B;  3L8B A;  2JH9 A;  1FZ4 E;  2OVR B;  1WAF A;  2OVP B;  4DTM A;  3QES A;  4FVM A;  1XMF E;  4I9Q A;  1FZ1 E;  2YB5 A;  3E4W A;  3SUN A;  3TJY A;  3UIQ A;  4FK0 A;  1FZ8 E;  3TAE A;  1XMG E;  4AI6 A;  4DU1 A;  2B1E A;  4X5M A;  4EYW A;  4KHY A;  3C95 A;  3L2O B;  4M41 A;  4DU4 A;  3NDK A;  4M3Z A;  1IG9 A;  3SQ4 A;  2ATQ A;  2FW3 A;  4DTR A;  2VJ5 A;  4QND A;  2B8I A;  4HCC A;  4FJK A;  2P1N B;  3SPZ A;  4DTO A;  4AKG A;  3SUO A;  4KHW A;  3OGL B;  4JRP A;  3E4Y A;  4ADN A;  4DU3 A;  4FJN A;  2LF6 A;  1FZ3 E;  4RL5 A;  3CQ8 A;  3TAF A;  3QEI A;  1MHZ G;  3J27 A;  3LZJ A;  2P5G A;  4FJM A;  4J2D A;  4M3X A;  2JPN A;  4M3Y A;  1CLQ A;  3L0M A;  3CFO A;  4DTN A;  1MTY G;  2PFT A;  4EPH A;  3SVI A;  4JS5 A;  3QET A;  1FXX A;  2VIX A;  1FZ7 E;  3OGK B;  2B7M A;  3RMD A;  3SQ1 A;  2MMB A;  4DTX A;  4J2E A;  2FYO A;  4FJ7 A;  3RMC A;  3SPY A;  3HP9 A;  3NCI A;  3S9H A;  1Q9Y A;  3RWU A;  4FJH A;  3N1E A;  3QNO A;  4HCB A;  4M3T A;  4FK4 A;  1LDK E;  3RMA A;  1FS1 A;  3J2P A;  4KHS A;  2DEB A;  2HD0 A;  3SQ2 A;  1XVD E;  2LF3 A;  3C6N B;  1MHY G;  2JH8 A;  2JHC A;  1FZ6 E;  1FZH E;  1XVE E;  3LD8 A;  3V7D B;  2OYQ A;  4J2B A;  3SNN A;  1XU5 E;  1FZ0 E;  4E3S A;  3LDB A;  5IZ7 A;  2P1M B;  4DTS A;  4JS4 A;  3K2O A;  4E4B A;  4FJ9 A;  3QNN A;  2H4T A;  2QXF A;  3C6O B;  4DTP A;  4J2A A;  4FK2 A;  3NGI A;  2OVQ B;  4JRQ A;  2DTU A;  3RMB A;  4I6J B;  2JHA A;  3HGK E;  3SUP A;  1XVB E;  1XVF E;  4I9L A;  3NE6 A;  3LDS A;  2E32 A;  4B08 A;  4ADO A;  1P22 A;  3NAE A;  4FJJ A;  4M42 A;  2P1Q B;  2P5O A;  1FZ9 E;  3SJJ A;  3KD1 E;  2JHP A;  4M3U A;  3QEW A;  1XVG E;  1XMH E;  4M45 A;  5IRE A;  1FYZ E;  2PFV A;  4DTJ A;  3CFP A;  4KHQ A;  1FZ5 E;  3HGL A;  3WSO A;  2E31 A;  3QEP A;  4FJG A;  3CFR A;  4KHN A;  3SUQ A;  1Q9X A;  1IH7 A;  4FJ5 A;  1XL3 C;  1FZ2 E;  3TAB A;  3QEV A;  4RG8 A;  1NEX B;  4AKH A;  3QER A;  3QEX A;  2OZS A;  4GAM C;  3MKS B;  3TL8 B;  3C6P B;  2P1O B;  3HL8 A;  4FJL A;  3SQ0 A;  4QNC A;  4FJX A;  5IBK B;  5H37 A;  4RNG A;  4M3R A;  3SCX A;  2OZM A;  3KD5 E;  2VJ4 A;  2P1P B;  4X5N A;  4KHU A;  4DTU A;  1FZI E;  4KI4 A;  4M3W A;  1WAJ A;  3NHG A;  1MMO G;  3OGM B;  2DY4 A;  3TAG A;  3N1B A;  1XU3 E;  4EP9 A;  4AKI A;  4FJ8 A;  3C94 A;  3LZI A;  2RCU A;  3L1N A;  3SI6 A;  1XVC E;  4FJI A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...