2PFTA

The crystal structure of mouse exo70 reveals unique features of the mammalian exocyst
Total Genus 222
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
568
structure length
519
Chain Sequence
DHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDNSPDSPELNKVKLLFERGKESLESEFRSLMTRHSKVVSPVLLLDLISADDELEHLPESVLRDVVRISRWLVEYGRNQDFMNVYYQIRSSQLDRSIKGLKEHFRKSLDVETDAYIHCVSAFVKLAQSEYRLLMEIIPEHHQKKTFDSLIQDALDGLMLEGENIVSAARKAIIRHDFSTVLTVFPILRHLKQTKPEFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKDGTVHELTSNAILFLQQLLDFQETAGAMLASQESSEFSKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQIQTYQRSWLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYIKYRVEQVGDMIDRLFDTS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title The crystal structure of mouse Exo70 reveals unique features of the mammalian exocyst.
pubmed doi rcsb
source organism Mus musculus
molecule tags Endocytosis/exocytosis
molecule keywords Exocytosis Protein
total genus 222
structure length 519
sequence length 568
ec nomenclature
pdb deposition date 2007-04-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03081 Exo70 Exo70 exocyst complex subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.170 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 2pftA00
2B1EA 2B7MA 2PFTA 4RL5A 2PFVA
chains in the Genus database with same CATH superfamily
4E4BA 3LDSA 3TL8B 3SPZA 2HD0A 4J2AA 4AKGA 1FZ2E 4FJ5A 2MW2A 3SQ4A 3KD1E 2FW3A 2JPNA 1XMGE 3UO3A 1FZ9E 2YB5A 2PFTA 4ADNA 3TAGA 3UO2A 1XMFE 4DU1A 1MHZG 3TJYA 3SNNA 1IG9A 1WAFA 2JH9A 1FZ7E 2FYOA 4M45A 1NEXB 3NHGA 2OZMA 3QETA 1FS1A 3K2OA 3SQ2A 4KHQA 2DY4A 2JHAA 4FJJA 2MMBA 3CFRA 3QERA 3RMAA 4KHNA 3N1EA 2P1OB 2RCUA 3HGLA 3HP9A 2OVPB 4M3ZA 5IREA 1FZIE 1XVFE 2K5SA 3E4YA 3SVIA 2RKHA 3C94A 4EPHA 1FPOA 3TABA 4KHSA 4FVMA 4EP9A 4ICGC 2JHPA 3MKSB 4HCBA 4DTNA 4I6JB 2QXFA 4HCCA 1MHYG 2LF6A 1FZ1E 2OZSA 4FJHA 2LF3A 4M3WA 1FZ4E 1Q9XA 4JS4A 4IT5A 1FZ6E 1LDKE 4DU4A 2E31A 3SUNA 1FZHE 4JRQA 4M41A 1JW2A 4KHUA 1Q9YA 4FJ8A 2MZWB 2OYQA 1XMHE 4FK2A 3QEPA 2JQTA 4E3SA 3QEIA 3TAEA 2P5OA 4ADOA 1MTYG 4M42A 3C6PB 3S9HA 3V7DB 3SI6A 3C6OB 4FJXA 3N1BA 3NE6A 1IH7A 3SJJA 4FJNA 2P1MB 4FJLA 4RNGA 4DTRA 4FK4A 4FJ9A 2E32A 3SUOA 2P1PB 3J27A 3SQ1A 3CFOA 4FJ7A 4JRPA 3SQ0A 1XVGE 3QEXA 4M3YA 4X5NA 4RL5A 3LZJA 4RG8A 3SUPA 3J2PA 1FXXA 1FZ3E 4DTSA 2B1EA 2ATQA 4DU3A 3QEWA 4M3XA 3NAEA 2VIXA 4AKHA 2OVQB 5H37A 4B08A 3TAFA 4EYWA 3L0MA 1XU3E 1FYZE 4FJKA 3E4WA 5IZ7A 3C6NB 1XVEE 3CQ8A 4DTJA 2VJ4A 4QNCA 4DTXA 3C95A 4I9LA 1P22A 4FJIA 4I9QA 4M3UA 4DTOA 3OGKB 4J2BA 1XVBE 4GAMC 3QNNA 2B7MA 4J2EA 3HGKE 2P1NB 3BVOA 3OGLB 4QNDA 5IBKB 3LZIA 2VJ5A 4M3RA 3QESA 3RMBA 3RMDA 4FJMA 4FK0A 2B8IA 2P1QB 4AI6A 1N1CA 4DTMA 3SCXA 1XL3C 1FZ5E 3LD8A 4X5MA 3LDBA 3L8BA 3OGMB 3L2OB 3SPYA 3WSOA 4JS5A 4FJGA 4KI4A 3RMCA 3UIQA 2OVRB 2DEBA 3NGIA 4KI6A 1FZ8E 2PFVA 3QEVA 1MMOG 1WAJA 2JHCA 3HL8A 1XVDE 2H4TA 2P5GA 3SUQA 3CFPA 4M3TA 1CLQA 4AKIA 4DTUA 4KHYA 3L1NA 2DTUA 3KD5E 1XVCE 1FZ0E 4DTPA 1XU5E 3NDKA 4J2DA 3NCIA 2JH8A 3QNOA 3RWUA 4KHWA
chains in the Genus database with same CATH topology
4E4BA 3LDSA 3TL8B 3SPZA 2HD0A 4J2AA 4AKGA 1FZ2E 4FJ5A 3SQ4A 3KD1E 2FW3A 2JPNA 1XMGE 1FZ9E 2YB5A 2PFTA 4ADNA 3TAGA 1XMFE 4DU1A 1MHZG 3TJYA 3SNNA 1IG9A 1WAFA 2JH9A 1FZ7E 2FYOA 4M45A 1NEXB 3NHGA 2OZMA 3QETA 1FS1A 3K2OA 3SQ2A 4KHQA 2DY4A 2JHAA 4FJJA 2MMBA 3CFRA 3QERA 3RMAA 4KHNA 3N1EA 2P1OB 2RCUA 3HGLA 3HP9A 2OVPB 4M3ZA 5IREA 1FZIE 1XVFE 3SVIA 3E4YA 3C94A 4EPHA 3TABA 4KHSA 4FVMA 4EP9A 2JHPA 3MKSB 4HCBA 4DTNA 4I6JB 2QXFA 4HCCA 1MHYG 2LF6A 1FZ1E 2OZSA 4FJHA 2LF3A 4M3WA 1FZ4E 1Q9XA 4JS4A 1FZ6E 1LDKE 4DU4A 2E31A 3SUNA 1FZHE 4JRQA 4M41A 4KHUA 1Q9YA 4FJ8A 2MZWB 2OYQA 1XMHE 4FK2A 3QEPA 3TAEA 4E3SA 3QEIA 2P5OA 4ADOA 1MTYG 4M42A 3C6PB 3S9HA 3V7DB 3SI6A 3C6OB 4FJXA 3N1BA 3NE6A 1IH7A 3SJJA 4FJNA 2P1MB 4FJLA 4RNGA 4DTRA 4FK4A 4FJ9A 2E32A 3SUOA 2P1PB 3J27A 3SQ1A 3CFOA 4FJ7A 4JRPA 3SQ0A 1XVGE 3QEXA 4M3YA 4X5NA 4RL5A 3LZJA 4RG8A 3SUPA 3J2PA 1FXXA 1FZ3E 4DTSA 2B1EA 2ATQA 4DU3A 3QEWA 4M3XA 3NAEA 2VIXA 4AKHA 2OVQB 5H37A 4B08A 3TAFA 4EYWA 3L0MA 1XU3E 1FYZE 4FJKA 3E4WA 5IZ7A 3C6NB 1XVEE 3CQ8A 4DTJA 2VJ4A 4QNCA 4DTXA 3C95A 4I9LA 1P22A 4FJIA 4I9QA 4M3UA 4DTOA 3OGKB 4J2BA 1XVBE 4GAMC 3QNNA 2B7MA 4J2EA 3HGKE 2P1NB 5IBKB 3OGLB 4QNDA 3LZIA 3RMBA 2VJ5A 4M3RA 3QESA 3RMDA 4FJMA 4FK0A 2B8IA 2P1QB 4AI6A 4DTMA 3SCXA 1XL3C 1FZ5E 3LD8A 4X5MA 3LDBA 3L8BA 3OGMB 3L2OB 3SPYA 3WSOA 4JS5A 4FJGA 4KI4A 3RMCA 3UIQA 2OVRB 2DEBA 3NGIA 4KI6A 1FZ8E 2PFVA 3QEVA 1MMOG 1WAJA 2JHCA 3HL8A 1XVDE 2H4TA 2P5GA 3SUQA 3CFPA 4M3TA 1CLQA 4AKIA 4DTUA 4KHYA 3L1NA 2DTUA 3KD5E 1XVCE 1FZ0E 4DTPA 1XU5E 3NDKA 4J2DA 3NCIA 2JH8A 3QNOA 3RWUA 4KHWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B1E A;  2B7M A;  2PFT A;  4RL5 A;  2PFV A; 
#chains in the Genus database with same CATH topology
 4E4B A;  3LDS A;  3TL8 B;  3SPZ A;  2HD0 A;  4J2A A;  4AKG A;  1FZ2 E;  4FJ5 A;  2MW2 A;  3SQ4 A;  3KD1 E;  2FW3 A;  2JPN A;  1XMG E;  3UO3 A;  1FZ9 E;  2YB5 A;  2PFT A;  4ADN A;  3TAG A;  3UO2 A;  1XMF E;  4DU1 A;  1MHZ G;  3TJY A;  3SNN A;  1IG9 A;  1WAF A;  2JH9 A;  1FZ7 E;  2FYO A;  4M45 A;  1NEX B;  3NHG A;  2OZM A;  3QET A;  1FS1 A;  3K2O A;  3SQ2 A;  4KHQ A;  2DY4 A;  2JHA A;  4FJJ A;  2MMB A;  3CFR A;  3QER A;  3RMA A;  4KHN A;  3N1E A;  2P1O B;  2RCU A;  3HGL A;  3HP9 A;  2OVP B;  4M3Z A;  5IRE A;  1FZI E;  1XVF E;  2K5S A;  3E4Y A;  3SVI A;  2RKH A;  3C94 A;  4EPH A;  1FPO A;  3TAB A;  4KHS A;  4FVM A;  4EP9 A;  4ICG C;  2JHP A;  3MKS B;  4HCB A;  4DTN A;  4I6J B;  2QXF A;  4HCC A;  1MHY G;  2LF6 A;  1FZ1 E;  2OZS A;  4FJH A;  2LF3 A;  4M3W A;  1FZ4 E;  1Q9X A;  4JS4 A;  4IT5 A;  1FZ6 E;  1LDK E;  4DU4 A;  2E31 A;  3SUN A;  1FZH E;  4JRQ A;  4M41 A;  1JW2 A;  4KHU A;  1Q9Y A;  4FJ8 A;  2MZW B;  2OYQ A;  1XMH E;  4FK2 A;  3QEP A;  2JQT A;  4E3S A;  3QEI A;  3TAE A;  2P5O A;  4ADO A;  1MTY G;  4M42 A;  3C6P B;  3S9H A;  3V7D B;  3SI6 A;  3C6O B;  4FJX A;  3N1B A;  3NE6 A;  1IH7 A;  3SJJ A;  4FJN A;  2P1M B;  4FJL A;  4RNG A;  4DTR A;  4FK4 A;  4FJ9 A;  2E32 A;  3SUO A;  2P1P B;  3J27 A;  3SQ1 A;  3CFO A;  4FJ7 A;  4JRP A;  3SQ0 A;  1XVG E;  3QEX A;  4M3Y A;  4X5N A;  4RL5 A;  3LZJ A;  4RG8 A;  3SUP A;  3J2P A;  1FXX A;  1FZ3 E;  4DTS A;  2B1E A;  2ATQ A;  4DU3 A;  3QEW A;  4M3X A;  3NAE A;  2VIX A;  4AKH A;  2OVQ B;  5H37 A;  4B08 A;  3TAF A;  4EYW A;  3L0M A;  1XU3 E;  1FYZ E;  4FJK A;  3E4W A;  5IZ7 A;  3C6N B;  1XVE E;  3CQ8 A;  4DTJ A;  2VJ4 A;  4QNC A;  4DTX A;  3C95 A;  4I9L A;  1P22 A;  4FJI A;  4I9Q A;  4M3U A;  4DTO A;  3OGK B;  4J2B A;  1XVB E;  4GAM C;  3QNN A;  2B7M A;  4J2E A;  3HGK E;  2P1N B;  3BVO A;  3OGL B;  4QND A;  5IBK B;  3LZI A;  2VJ5 A;  4M3R A;  3QES A;  3RMB A;  3RMD A;  4FJM A;  4FK0 A;  2B8I A;  2P1Q B;  4AI6 A;  1N1C A;  4DTM A;  3SCX A;  1XL3 C;  1FZ5 E;  3LD8 A;  4X5M A;  3LDB A;  3L8B A;  3OGM B;  3L2O B;  3SPY A;  3WSO A;  4JS5 A;  4FJG A;  4KI4 A;  3RMC A;  3UIQ A;  2OVR B;  2DEB A;  3NGI A;  4KI6 A;  1FZ8 E;  2PFV A;  3QEV A;  1MMO G;  1WAJ A;  2JHC A;  3HL8 A;  1XVD E;  2H4T A;  2P5G A;  3SUQ A;  3CFP A;  4M3T A;  1CLQ A;  4AKI A;  4DTU A;  4KHY A;  3L1N A;  2DTU A;  3KD5 E;  1XVC E;  1FZ0 E;  4DTP A;  1XU5 E;  3NDK A;  4J2D A;  3NCI A;  2JH8 A;  3QNO A;  3RWU A;  4KHW A; 
#chains in the Genus database with same CATH homology
 4E4B A;  3LDS A;  3TL8 B;  3SPZ A;  2HD0 A;  4J2A A;  4AKG A;  1FZ2 E;  4FJ5 A;  3SQ4 A;  3KD1 E;  2FW3 A;  2JPN A;  1XMG E;  1FZ9 E;  2YB5 A;  2PFT A;  4ADN A;  3TAG A;  1XMF E;  4DU1 A;  1MHZ G;  3TJY A;  3SNN A;  1IG9 A;  1WAF A;  2JH9 A;  1FZ7 E;  2FYO A;  4M45 A;  1NEX B;  3NHG A;  2OZM A;  3QET A;  1FS1 A;  3K2O A;  3SQ2 A;  4KHQ A;  2DY4 A;  2JHA A;  4FJJ A;  2MMB A;  3CFR A;  3QER A;  3RMA A;  4KHN A;  3N1E A;  2P1O B;  2RCU A;  3HGL A;  3HP9 A;  2OVP B;  4M3Z A;  5IRE A;  1FZI E;  1XVF E;  3SVI A;  3E4Y A;  3C94 A;  4EPH A;  3TAB A;  4KHS A;  4FVM A;  4EP9 A;  2JHP A;  3MKS B;  4HCB A;  4DTN A;  4I6J B;  2QXF A;  4HCC A;  1MHY G;  2LF6 A;  1FZ1 E;  2OZS A;  4FJH A;  2LF3 A;  4M3W A;  1FZ4 E;  1Q9X A;  4JS4 A;  1FZ6 E;  1LDK E;  4DU4 A;  2E31 A;  3SUN A;  1FZH E;  4JRQ A;  4M41 A;  4KHU A;  1Q9Y A;  4FJ8 A;  2MZW B;  2OYQ A;  1XMH E;  4FK2 A;  3QEP A;  3TAE A;  4E3S A;  3QEI A;  2P5O A;  4ADO A;  1MTY G;  4M42 A;  3C6P B;  3S9H A;  3V7D B;  3SI6 A;  3C6O B;  4FJX A;  3N1B A;  3NE6 A;  1IH7 A;  3SJJ A;  4FJN A;  2P1M B;  4FJL A;  4RNG A;  4DTR A;  4FK4 A;  4FJ9 A;  2E32 A;  3SUO A;  2P1P B;  3J27 A;  3SQ1 A;  3CFO A;  4FJ7 A;  4JRP A;  3SQ0 A;  1XVG E;  3QEX A;  4M3Y A;  4X5N A;  4RL5 A;  3LZJ A;  4RG8 A;  3SUP A;  3J2P A;  1FXX A;  1FZ3 E;  4DTS A;  2B1E A;  2ATQ A;  4DU3 A;  3QEW A;  4M3X A;  3NAE A;  2VIX A;  4AKH A;  2OVQ B;  5H37 A;  4B08 A;  3TAF A;  4EYW A;  3L0M A;  1XU3 E;  1FYZ E;  4FJK A;  3E4W A;  5IZ7 A;  3C6N B;  1XVE E;  3CQ8 A;  4DTJ A;  2VJ4 A;  4QNC A;  4DTX A;  3C95 A;  4I9L A;  1P22 A;  4FJI A;  4I9Q A;  4M3U A;  4DTO A;  3OGK B;  4J2B A;  1XVB E;  4GAM C;  3QNN A;  2B7M A;  4J2E A;  3HGK E;  2P1N B;  5IBK B;  3OGL B;  4QND A;  3LZI A;  3RMB A;  2VJ5 A;  4M3R A;  3QES A;  3RMD A;  4FJM A;  4FK0 A;  2B8I A;  2P1Q B;  4AI6 A;  4DTM A;  3SCX A;  1XL3 C;  1FZ5 E;  3LD8 A;  4X5M A;  3LDB A;  3L8B A;  3OGM B;  3L2O B;  3SPY A;  3WSO A;  4JS5 A;  4FJG A;  4KI4 A;  3RMC A;  3UIQ A;  2OVR B;  2DEB A;  3NGI A;  4KI6 A;  1FZ8 E;  2PFV A;  3QEV A;  1MMO G;  1WAJ A;  2JHC A;  3HL8 A;  1XVD E;  2H4T A;  2P5G A;  3SUQ A;  3CFP A;  4M3T A;  1CLQ A;  4AKI A;  4DTU A;  4KHY A;  3L1N A;  2DTU A;  3KD5 E;  1XVC E;  1FZ0 E;  4DTP A;  1XU5 E;  3NDK A;  4J2D A;  3NCI A;  2JH8 A;  3QNO A;  3RWU A;  4KHW A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...