2PFTA

The crystal structure of mouse exo70 reveals unique features of the mammalian exocyst
Total Genus 222
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
222
sequence length
568
structure length
519
Chain Sequence
b'DHVISYYHVASDTEKIIREGPTGRLEEYLGSMAKIQKAVEYFQDNSPDSPELNKVKLLFERGKESLESEFRSLMTRHSKVVSPVLLLDLISADDELEHLPESVLRDVVRISRWLVEYGRNQDFMNVYYQIRSSQLDRSIKGLKEHFRKSLDVETDAYIHCVSAFVKLAQSEYRLLMEIIPEHHQKKTFDSLIQDALDGLMLEGENIVSAARKAIIRHDFSTVLTVFPILRHLKQTKPEFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPDKEYNMPKDGTVHELTSNAILFLQQLLDFQETAGAMLASQESSEFSKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSAIFLHNNYNYILKSLEKSELIQLVAVTQKTAERSYREHIEQQIQTYQRSWLKVTDYIAEKNLPVFQPGVKLRDKERQMIKERFKGFNDGLEELCKIQKVWAIPDTEQRDKIRQAQKDIVKETYGAFLHRYGSVPFTKNPEKYIKYRVEQVGDMIDRLFDTS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Exocytosis Protein
publication title The crystal structure of mouse Exo70 reveals unique features of the mammalian exocyst.
pubmed doi rcsb
source organism Mus musculus
molecule tags Endocytosis/exocytosis
total genus 222
structure length 519
sequence length 568
ec nomenclature
pdb deposition date 2007-04-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03081 Exo70 Exo70 exocyst complex subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.170 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 2pftA00
2PFVA 4RL5A 2B1EA 2B7MA 2PFTA
chains in the Genus database with same CATH superfamily
1NEXB 4HCBA 3L2OB 2OYQA 3SVIA 1N1CA 1Q9YA 2P1QB 3SUPA 3SJJA 4M3ZA 3K2OA 3RMAA 5IBKB 3V7DB 3SQ2A 3J2PA 3L8BA 4DTUA 3NHGA 4FJGA 2QXFA 1XMGE 4J2EA 2LF6A 1XVFE 4I9LA 2FW3A 2RCUA 4DU4A 3RWUA 3QERA 4QNDA 4FK2A 1LDKE 4QNCA 4X5MA 4JS5A 3SUQA 4FJJA 1MMOG 4FJ9A 4IT5A 2DY4A 2P1PB 3SI6A 4AKHA 3C6NB 4I9QA 1FZIE 4EYWA 3C95A 4JS4A 3SUNA 3OGKB 4DTSA 3TAGA 2HD0A 2OVPB 1FZ8E 3TAEA 3TJYA 3QEXA 3QNOA 3NAEA 2P1NB 2JHCA 2MZWB 4B08A 1XU3E 2K5SA 3SUOA 4M3UA 3WSOA 4FVMA 4M45A 3CFPA 2VJ5A 2JHAA 2P1MB 2PFTA 3QEIA 3QESA 1IG9A 4FJKA 4DTXA 3OGMB 1FPOA 4E4BA 2H4TA 3NCIA 4GAMC 4JRPA 3S9HA 2P5OA 4AKGA 2DEBA 3NDKA 1XVBE 4M3TA 2P1OB 3KD1E 2YB5A 2VJ4A 3LDSA 3CQ8A 4FJMA 3N1BA 1MHYG 3RMBA 3SPYA 1P22A 1XVGE 4J2DA 2OZSA 4FJHA 2VIXA 4J2AA 4DU1A 1MHZG 2B8IA 4KHWA 3MKSB 1FZ0E 4DU3A 3QEPA 5IREA 2E31A 1FZHE 3HGKE 4EP9A 4KHUA 4KHYA 3SQ0A 4RNGA 4AI6A 4DTJA 3C94A 4M3YA 2P5GA 1XVCE 1FYZE 3UO2A 3SQ1A 1FZ9E 3SNNA 3QNNA 1XU5E 4M3RA 2RKHA 3E4WA 4I6JB 4DTMA 2JPNA 3NGIA 4E3SA 4KI4A 5IZ7A 4RL5A 2JHPA 4M3WA 3OGLB 1WAJA 3NE6A 3QETA 4M3XA 4RG8A 4ICGC 4KI6A 3UIQA 1FZ6E 1WAFA 3E4YA 4KHNA 3QEWA 3LDBA 4FJLA 1XL3C 4EPHA 1IH7A 3C6PB 3CFOA 3SPZA 1Q9XA 4M41A 1XVEE 4AKIA 3RMCA 3CFRA 1FS1A 3L0MA 2DTUA 1FZ5E 2LF3A 3SQ4A 3HL8A 2ATQA 4J2BA 4DTPA 3SCXA 4FK4A 3LZJA 1CLQA 1XMFE 2E32A 4M42A 3BVOA 1MTYG 2OVQB 4DTRA 3RMDA 1FZ2E 4KHSA 2B1EA 2MW2A 2OZMA 2B7MA 3LD8A 3C6OB 4FJIA 1FZ7E 1FZ3E 1XVDE 3N1EA 3KD5E 5H37A 3HGLA 4KHQA 2FYOA 4FJXA 4DTNA 3QEVA 4X5NA 3LZIA 1JW2A 2PFVA 4JRQA 4FJ7A 3TL8B 1FXXA 4DTOA 2JQTA 3J27A 3TABA 3TAFA 4HCCA 3L1NA 3UO3A 3HP9A 2MMBA 4ADOA 1XMHE 1FZ1E 2OVRB 2JH8A 4FJNA 2JH9A 1FZ4E 4FK0A 4ADNA 4FJ8A 4FJ5A
chains in the Genus database with same CATH topology
1NEXB 4HCBA 3L2OB 2OYQA 3SVIA 1Q9YA 2P1QB 3SUPA 3SJJA 4M3ZA 3K2OA 3RMAA 5IBKB 3V7DB 3SQ2A 3J2PA 3L8BA 4DTUA 3NHGA 4FJGA 2QXFA 1XMGE 4J2EA 2LF6A 1XVFE 4I9LA 2FW3A 2RCUA 4DU4A 3RWUA 3QERA 4QNDA 4FK2A 1LDKE 4QNCA 4X5MA 4JS5A 3SUQA 4FJJA 1MMOG 4FJ9A 4AKIA 2DY4A 2P1PB 3SI6A 4AKHA 3C6NB 4I9QA 1FZIE 4EYWA 3C95A 4JS4A 3SUNA 3OGKB 4DTSA 3TAGA 2HD0A 2OVPB 1FZ8E 3TAEA 3TJYA 3QEXA 3QNOA 3NAEA 2P1NB 2JHCA 2MZWB 4B08A 1XU3E 3SUOA 4M3UA 3WSOA 4FVMA 4M45A 3CFPA 2VJ5A 2JHAA 2P1MB 2PFTA 3QEIA 3QESA 1IG9A 4FJKA 4DTXA 3OGMB 4E4BA 2H4TA 3NCIA 4GAMC 4JRPA 3S9HA 2P5OA 4AKGA 2DEBA 3NDKA 1XVBE 4M3TA 2P1OB 3KD1E 2YB5A 2VJ4A 3LDSA 3CQ8A 4FJMA 3N1BA 1MHYG 3RMBA 3SPYA 1P22A 1XVGE 4J2DA 2OZSA 4FJHA 2VIXA 4J2AA 4DU1A 1MHZG 2B8IA 4KHWA 3MKSB 1FZ0E 4DU3A 3QEPA 5IREA 2E31A 1FZHE 3HGKE 4EP9A 4KHUA 4KHYA 3SQ0A 4RNGA 4AI6A 4DTJA 3C94A 4M3YA 2P5GA 1XVCE 1FYZE 3SQ1A 1FZ9E 3SNNA 3QNNA 1XU5E 4M3RA 3E4WA 4I6JB 4DTMA 2JPNA 3NGIA 4E3SA 4KI4A 5IZ7A 4RL5A 2JHPA 4M3WA 3OGLB 1WAJA 3NE6A 3QETA 4M3XA 4RG8A 4KI6A 3UIQA 1FZ6E 1WAFA 3E4YA 4KHNA 3QEWA 3LDBA 4FJLA 1XL3C 4EPHA 1IH7A 3C6PB 3CFOA 3SPZA 1Q9XA 4M41A 1XVEE 3RMCA 3CFRA 1FS1A 3L0MA 2DTUA 1FZ5E 2LF3A 3SQ4A 3HL8A 2ATQA 4J2BA 4DTPA 3SCXA 4FK4A 3LZJA 1CLQA 1XMFE 2E32A 4M42A 1MTYG 2OVQB 4DTRA 3RMDA 1FZ2E 4KHSA 2B1EA 2OZMA 2B7MA 3LD8A 3C6OB 4FJIA 1FZ7E 1FZ3E 1XVDE 3N1EA 3KD5E 5H37A 3HGLA 4KHQA 2FYOA 4FJXA 4DTNA 3QEVA 4X5NA 3LZIA 2PFVA 4JRQA 4FJ7A 3TL8B 1FXXA 4DTOA 3J27A 3TABA 3TAFA 4HCCA 3L1NA 3HP9A 2MMBA 4ADOA 1XMHE 1FZ1E 2OVRB 2JH8A 4FJNA 2JH9A 1FZ4E 4FK0A 4ADNA 4FJ8A 4FJ5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PFV A;  4RL5 A;  2B1E A;  2B7M A;  2PFT A; 
#chains in the Genus database with same CATH topology
 1NEX B;  4HCB A;  3L2O B;  2OYQ A;  3SVI A;  1N1C A;  1Q9Y A;  2P1Q B;  3SUP A;  3SJJ A;  4M3Z A;  3K2O A;  3RMA A;  5IBK B;  3V7D B;  3SQ2 A;  3J2P A;  3L8B A;  4DTU A;  3NHG A;  4FJG A;  2QXF A;  1XMG E;  4J2E A;  2LF6 A;  1XVF E;  4I9L A;  2FW3 A;  2RCU A;  4DU4 A;  3RWU A;  3QER A;  4QND A;  4FK2 A;  1LDK E;  4QNC A;  4X5M A;  4JS5 A;  3SUQ A;  4FJJ A;  1MMO G;  4FJ9 A;  4IT5 A;  2DY4 A;  2P1P B;  3SI6 A;  4AKH A;  3C6N B;  4I9Q A;  1FZI E;  4EYW A;  3C95 A;  4JS4 A;  3SUN A;  3OGK B;  4DTS A;  3TAG A;  2HD0 A;  2OVP B;  1FZ8 E;  3TAE A;  3TJY A;  3QEX A;  3QNO A;  3NAE A;  2P1N B;  2JHC A;  2MZW B;  4B08 A;  1XU3 E;  2K5S A;  3SUO A;  4M3U A;  3WSO A;  4FVM A;  4M45 A;  3CFP A;  2VJ5 A;  2JHA A;  2P1M B;  2PFT A;  3QEI A;  3QES A;  1IG9 A;  4FJK A;  4DTX A;  3OGM B;  1FPO A;  4E4B A;  2H4T A;  3NCI A;  4GAM C;  4JRP A;  3S9H A;  2P5O A;  4AKG A;  2DEB A;  3NDK A;  1XVB E;  4M3T A;  2P1O B;  3KD1 E;  2YB5 A;  2VJ4 A;  3LDS A;  3CQ8 A;  4FJM A;  3N1B A;  1MHY G;  3RMB A;  3SPY A;  1P22 A;  1XVG E;  4J2D A;  2OZS A;  4FJH A;  2VIX A;  4J2A A;  4DU1 A;  1MHZ G;  2B8I A;  4KHW A;  3MKS B;  1FZ0 E;  4DU3 A;  3QEP A;  5IRE A;  2E31 A;  1FZH E;  3HGK E;  4EP9 A;  4KHU A;  4KHY A;  3SQ0 A;  4RNG A;  4AI6 A;  4DTJ A;  3C94 A;  4M3Y A;  2P5G A;  1XVC E;  1FYZ E;  3UO2 A;  3SQ1 A;  1FZ9 E;  3SNN A;  3QNN A;  1XU5 E;  4M3R A;  2RKH A;  3E4W A;  4I6J B;  4DTM A;  2JPN A;  3NGI A;  4E3S A;  4KI4 A;  5IZ7 A;  4RL5 A;  2JHP A;  4M3W A;  3OGL B;  1WAJ A;  3NE6 A;  3QET A;  4M3X A;  4RG8 A;  4ICG C;  4KI6 A;  3UIQ A;  1FZ6 E;  1WAF A;  3E4Y A;  4KHN A;  3QEW A;  3LDB A;  4FJL A;  1XL3 C;  4EPH A;  1IH7 A;  3C6P B;  3CFO A;  3SPZ A;  1Q9X A;  4M41 A;  1XVE E;  4AKI A;  3RMC A;  3CFR A;  1FS1 A;  3L0M A;  2DTU A;  1FZ5 E;  2LF3 A;  3SQ4 A;  3HL8 A;  2ATQ A;  4J2B A;  4DTP A;  3SCX A;  4FK4 A;  3LZJ A;  1CLQ A;  1XMF E;  2E32 A;  4M42 A;  3BVO A;  1MTY G;  2OVQ B;  4DTR A;  3RMD A;  1FZ2 E;  4KHS A;  2B1E A;  2MW2 A;  2OZM A;  2B7M A;  3LD8 A;  3C6O B;  4FJI A;  1FZ7 E;  1FZ3 E;  1XVD E;  3N1E A;  3KD5 E;  5H37 A;  3HGL A;  4KHQ A;  2FYO A;  4FJX A;  4DTN A;  3QEV A;  4X5N A;  3LZI A;  1JW2 A;  2PFV A;  4JRQ A;  4FJ7 A;  3TL8 B;  1FXX A;  4DTO A;  2JQT A;  3J27 A;  3TAB A;  3TAF A;  4HCC A;  3L1N A;  3UO3 A;  3HP9 A;  2MMB A;  4ADO A;  1XMH E;  1FZ1 E;  2OVR B;  2JH8 A;  4FJN A;  2JH9 A;  1FZ4 E;  4FK0 A;  4ADN A;  4FJ8 A;  4FJ5 A; 
#chains in the Genus database with same CATH homology
 1NEX B;  4HCB A;  3L2O B;  2OYQ A;  3SVI A;  1Q9Y A;  2P1Q B;  3SUP A;  3SJJ A;  4M3Z A;  3K2O A;  3RMA A;  5IBK B;  3V7D B;  3SQ2 A;  3J2P A;  3L8B A;  4DTU A;  3NHG A;  4FJG A;  2QXF A;  1XMG E;  4J2E A;  2LF6 A;  1XVF E;  4I9L A;  2FW3 A;  2RCU A;  4DU4 A;  3RWU A;  3QER A;  4QND A;  4FK2 A;  1LDK E;  4QNC A;  4X5M A;  4JS5 A;  3SUQ A;  4FJJ A;  1MMO G;  4FJ9 A;  4AKI A;  2DY4 A;  2P1P B;  3SI6 A;  4AKH A;  3C6N B;  4I9Q A;  1FZI E;  4EYW A;  3C95 A;  4JS4 A;  3SUN A;  3OGK B;  4DTS A;  3TAG A;  2HD0 A;  2OVP B;  1FZ8 E;  3TAE A;  3TJY A;  3QEX A;  3QNO A;  3NAE A;  2P1N B;  2JHC A;  2MZW B;  4B08 A;  1XU3 E;  3SUO A;  4M3U A;  3WSO A;  4FVM A;  4M45 A;  3CFP A;  2VJ5 A;  2JHA A;  2P1M B;  2PFT A;  3QEI A;  3QES A;  1IG9 A;  4FJK A;  4DTX A;  3OGM B;  4E4B A;  2H4T A;  3NCI A;  4GAM C;  4JRP A;  3S9H A;  2P5O A;  4AKG A;  2DEB A;  3NDK A;  1XVB E;  4M3T A;  2P1O B;  3KD1 E;  2YB5 A;  2VJ4 A;  3LDS A;  3CQ8 A;  4FJM A;  3N1B A;  1MHY G;  3RMB A;  3SPY A;  1P22 A;  1XVG E;  4J2D A;  2OZS A;  4FJH A;  2VIX A;  4J2A A;  4DU1 A;  1MHZ G;  2B8I A;  4KHW A;  3MKS B;  1FZ0 E;  4DU3 A;  3QEP A;  5IRE A;  2E31 A;  1FZH E;  3HGK E;  4EP9 A;  4KHU A;  4KHY A;  3SQ0 A;  4RNG A;  4AI6 A;  4DTJ A;  3C94 A;  4M3Y A;  2P5G A;  1XVC E;  1FYZ E;  3SQ1 A;  1FZ9 E;  3SNN A;  3QNN A;  1XU5 E;  4M3R A;  3E4W A;  4I6J B;  4DTM A;  2JPN A;  3NGI A;  4E3S A;  4KI4 A;  5IZ7 A;  4RL5 A;  2JHP A;  4M3W A;  3OGL B;  1WAJ A;  3NE6 A;  3QET A;  4M3X A;  4RG8 A;  4KI6 A;  3UIQ A;  1FZ6 E;  1WAF A;  3E4Y A;  4KHN A;  3QEW A;  3LDB A;  4FJL A;  1XL3 C;  4EPH A;  1IH7 A;  3C6P B;  3CFO A;  3SPZ A;  1Q9X A;  4M41 A;  1XVE E;  3RMC A;  3CFR A;  1FS1 A;  3L0M A;  2DTU A;  1FZ5 E;  2LF3 A;  3SQ4 A;  3HL8 A;  2ATQ A;  4J2B A;  4DTP A;  3SCX A;  4FK4 A;  3LZJ A;  1CLQ A;  1XMF E;  2E32 A;  4M42 A;  1MTY G;  2OVQ B;  4DTR A;  3RMD A;  1FZ2 E;  4KHS A;  2B1E A;  2OZM A;  2B7M A;  3LD8 A;  3C6O B;  4FJI A;  1FZ7 E;  1FZ3 E;  1XVD E;  3N1E A;  3KD5 E;  5H37 A;  3HGL A;  4KHQ A;  2FYO A;  4FJX A;  4DTN A;  3QEV A;  4X5N A;  3LZI A;  2PFV A;  4JRQ A;  4FJ7 A;  3TL8 B;  1FXX A;  4DTO A;  3J27 A;  3TAB A;  3TAF A;  4HCC A;  3L1N A;  3HP9 A;  2MMB A;  4ADO A;  1XMH E;  1FZ1 E;  2OVR B;  2JH8 A;  4FJN A;  2JH9 A;  1FZ4 E;  4FK0 A;  4ADN A;  4FJ8 A;  4FJ5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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