1MHYG

Methane monooxygenase hydroxylase
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
167
structure length
167
Chain Sequence
AKREPIHDNSIRTEWEAKIAKLTSVDQATKFIQDFRLAYTSPFRKSYDIDVDYQYIERKIEEKLSVLKTEKLPVADLITKATTGEDAAAVEATWIAKIKAAKSKYEAEAIHIEFRQLYKPPVLPVNVFLRTDAALGTVLMEIRNTDYYGTPLEGLRKERGVKVLHLQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords METHANE MONOOXYGENASE HYDROXYLASE
publication title Crystal structure of the hydroxylase component of methane monooxygenase from Methylosinus trichosporium OB3b
pubmed rcsb
total genus 63
structure length 167
sequence length 167
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 1996-10-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
G PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1mhyG01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1mhyG02
1XVFE 1MHZG 1MTYG 1XMHE 1XVBE 1XU3E 1MMOG 1FZ3E 1FZ1E 1XVCE 1XVDE 1FZ9E 1MHYG 1FZ6E 1FZ4E 1XU5E 1FZ8E 1FYZE 1XMGE 1XMFE 1XVGE 4GAMC 1FZ2E 1FZ0E 1FZIE 1FZ7E 1FZHE 1XVEE 1FZ5E
chains in the Genus database with same CATH superfamily
1LDKE 3HGLA 2K5SA 4KHUA 4M3XA 2LF3A 4I6JB 3OGMB 4AKIA 4I9LA 4FJLA 3HP9A 4AI6A 1FZ3E 4AKGA 4M3TA 2FW3A 4FJIA 4EPHA 1FZ6E 4J2EA 4DTSA 4DTRA 2YB5A 4FJJA 4KHYA 1CLQA 3C94A 5IZ7A 1XMGE 3SQ0A 3KD1E 3RWUA 2OVPB 2FYOA 3SPZA 4HCBA 4DTPA 4I9QA 4KHQA 3NGIA 4M3WA 2P1MB 3V7DB 4QNCA 4DTMA 1FZ2E 2RKHA 1N1CA 3LDSA 2P1OB 5IREA 3WSOA 5IBKB 2ATQA 4E3SA 3QEIA 1Q9XA 1FZ5E 4EP9A 4JRQA 3SJJA 3SUNA 3QETA 3RMDA 4FJ7A 1XMHE 3J27A 2DY4A 4DTNA 4FJHA 3C95A 1IH7A 2B8IA 3MKSB 1MMOG 3SQ4A 4JS5A 4DU4A 3NE6A 3QNNA 4DTOA 4FK2A 1FS1A 1FZ4E 3SPYA 3J2PA 3L2OB 4DU1A 1FYZE 3K2OA 4FK0A 3TAFA 4IT5A 4FVMA 1XMFE 4ICGC 3QEPA 1XVGE 4DTXA 3E4YA 2LF6A 2OYQA 3UO3A 3TL8B 3TAGA 2B1EA 4E4BA 3UIQA 1FZHE 4FJ5A 3N1BA 4J2DA 4DU3A 3QEXA 4FJGA 4FJ9A 2P1QB 1FXXA 2OVRB 3LDBA 2P5GA 3L1NA 3CQ8A 3SUOA 3LZJA 3SNNA 4ADOA 4M3UA 3C6OB 1MHZG 1XVBE 3SI6A 2JHAA 4KI4A 2E32A 3UO2A 2PFVA 4X5NA 2PFTA 2OZSA 1FZ1E 1P22A 1XVCE 4ADNA 4JS4A 4FJNA 2OVQB 1FZ9E 3CFRA 4QNDA 3TJYA 3LD8A 4RNGA 4X5MA 3NAEA 3QEWA 2MMBA 3S9HA 3SQ2A 4FJXA 2JQTA 4RL5A 4M42A 4J2AA 3RMBA 3N1EA 3CFOA 4GAMC 2MW2A 3KD5E 4J2BA 2HD0A 1FZ0E 2H4TA 2JH8A 4M41A 4EYWA 2P5OA 3NHGA 2JPNA 1FPOA 3SCXA 2MZWB 4M3RA 2B7MA 3HL8A 4FJKA 2DTUA 3BVOA 3NDKA 1XVFE 3C6NB 2P1PB 1NEXB 3LZIA 2RCUA 3HGKE 3QEVA 3SQ1A 4FJ8A 2QXFA 4M45A 3TAEA 4M3YA 1MTYG 1JW2A 5H37A 3RMAA 1XU3E 4AKHA 2E31A 4KHSA 2JHPA 2JH9A 4JRPA 3QERA 3TABA 4KI6A 1WAJA 4DTUA 1XVDE 1MHYG 4KHWA 2VJ4A 3E4WA 4FJMA 1XU5E 4B08A 1FZ8E 1Q9YA 3SVIA 2VIXA 3L8BA 3QESA 3CFPA 3SUQA 3QNOA 3RMCA 1IG9A 3NCIA 2P1NB 3OGKB 4HCCA 4DTJA 4KHNA 4M3ZA 1XL3C 2VJ5A 2DEBA 1FZIE 1FZ7E 3L0MA 3OGLB 1WAFA 3C6PB 2JHCA 3SUPA 1XVEE 4RG8A 4FK4A 2OZMA
chains in the Genus database with same CATH topology
1LDKE 3HGLA 4KHUA 4M3XA 2LF3A 4I6JB 3OGMB 4AKIA 4I9LA 4FJLA 3HP9A 4AI6A 1FZ3E 4AKGA 4M3TA 2FW3A 4FJIA 4EPHA 1FZ6E 4J2EA 4DTSA 4DTRA 2YB5A 4FJJA 4KHYA 1CLQA 3C94A 5IZ7A 1XMGE 3SQ0A 3KD1E 3RWUA 2OVPB 2FYOA 3SPZA 4HCBA 4DTPA 4I9QA 4KHQA 3NGIA 4M3WA 2P1MB 3V7DB 4QNCA 4DTMA 1FZ2E 3LDSA 2P1OB 5IREA 3WSOA 5IBKB 2ATQA 4E3SA 3QEIA 1Q9XA 1FZ5E 4EP9A 4JRQA 3SJJA 3SUNA 3QETA 3RMDA 4FJ7A 1XMHE 3J27A 2DY4A 4DTNA 4FJHA 3C95A 1IH7A 2B8IA 3MKSB 1MMOG 3SQ4A 4JS5A 4DU4A 3NE6A 3QNNA 4DTOA 4FK2A 1FS1A 1FZ4E 3SPYA 3J2PA 3L2OB 4DU1A 1FYZE 3K2OA 4FK0A 3TAFA 4FVMA 1XMFE 3QEPA 1XVGE 4DTXA 3E4YA 2LF6A 2OYQA 3TL8B 3TAGA 2B1EA 4E4BA 3UIQA 1FZHE 4FJ5A 3N1BA 4J2DA 4DU3A 3QEXA 4FJGA 4FJ9A 2P1QB 1FXXA 2OVRB 3LDBA 2P5GA 3L1NA 3CQ8A 3SUOA 3LZJA 3SNNA 4ADOA 4M3UA 3C6OB 1MHZG 1XVBE 3SI6A 2JHAA 4KI4A 2E32A 2PFVA 4X5NA 2PFTA 2OZSA 1FZ1E 1P22A 1XVCE 4ADNA 4JS4A 4FJNA 2OVQB 1FZ9E 3CFRA 4QNDA 3TJYA 3LD8A 4RNGA 4X5MA 3NAEA 3QEWA 2MMBA 3S9HA 3SQ2A 4FJXA 4RL5A 4M42A 4J2AA 3RMBA 3N1EA 3CFOA 4GAMC 3KD5E 4J2BA 2HD0A 1FZ0E 2H4TA 2JH8A 4M41A 4EYWA 2P5OA 3NHGA 2JPNA 3SCXA 2MZWB 4M3RA 2B7MA 3HL8A 4FJKA 2DTUA 3NDKA 1XVFE 3C6NB 2P1PB 1NEXB 3LZIA 2RCUA 3HGKE 3QEVA 3SQ1A 4FJ8A 2QXFA 4M45A 3TAEA 4M3YA 1MTYG 5H37A 3RMAA 1XU3E 4AKHA 2E31A 4KHSA 2JHPA 2JH9A 4JRPA 3QERA 3TABA 4KI6A 1WAJA 4DTUA 1XVDE 1MHYG 4KHWA 2VJ4A 3E4WA 4FJMA 1XU5E 4B08A 1FZ8E 1Q9YA 3SVIA 2VIXA 3L8BA 3QESA 3CFPA 3SUQA 3QNOA 3RMCA 1IG9A 3NCIA 2P1NB 3OGKB 4HCCA 4DTJA 4KHNA 4M3ZA 1XL3C 2DEBA 1FZIE 1FZ7E 2VJ5A 3L0MA 3OGLB 1WAFA 3C6PB 2JHCA 3SUPA 1XVEE 4RG8A 4FK4A 2OZMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1XVF E;  1MHZ G;  1MTY G;  1XMH E;  1XVB E;  1XU3 E;  1MMO G;  1FZ3 E;  1FZ1 E;  1XVC E;  1XVD E;  1FZ9 E;  1MHY G;  1FZ6 E;  1FZ4 E;  1XU5 E;  1FZ8 E;  1FYZ E;  1XMG E;  1XMF E;  1XVG E;  4GAM C;  1FZ2 E;  1FZ0 E;  1FZI E;  1FZ7 E;  1FZH E;  1XVE E;  1FZ5 E; 
#chains in the Genus database with same CATH topology
 1LDK E;  3HGL A;  2K5S A;  4KHU A;  4M3X A;  2LF3 A;  4I6J B;  3OGM B;  4AKI A;  4I9L A;  4FJL A;  3HP9 A;  4AI6 A;  1FZ3 E;  4AKG A;  4M3T A;  2FW3 A;  4FJI A;  4EPH A;  1FZ6 E;  4J2E A;  4DTS A;  4DTR A;  2YB5 A;  4FJJ A;  4KHY A;  1CLQ A;  3C94 A;  5IZ7 A;  1XMG E;  3SQ0 A;  3KD1 E;  3RWU A;  2OVP B;  2FYO A;  3SPZ A;  4HCB A;  4DTP A;  4I9Q A;  4KHQ A;  3NGI A;  4M3W A;  2P1M B;  3V7D B;  4QNC A;  4DTM A;  1FZ2 E;  2RKH A;  1N1C A;  3LDS A;  2P1O B;  5IRE A;  3WSO A;  5IBK B;  2ATQ A;  4E3S A;  3QEI A;  1Q9X A;  1FZ5 E;  4EP9 A;  4JRQ A;  3SJJ A;  3SUN A;  3QET A;  3RMD A;  4FJ7 A;  1XMH E;  3J27 A;  2DY4 A;  4DTN A;  4FJH A;  3C95 A;  1IH7 A;  2B8I A;  3MKS B;  1MMO G;  3SQ4 A;  4JS5 A;  4DU4 A;  3NE6 A;  3QNN A;  4DTO A;  4FK2 A;  1FS1 A;  1FZ4 E;  3SPY A;  3J2P A;  3L2O B;  4DU1 A;  1FYZ E;  3K2O A;  4FK0 A;  3TAF A;  4IT5 A;  4FVM A;  1XMF E;  4ICG C;  3QEP A;  1XVG E;  4DTX A;  3E4Y A;  2LF6 A;  2OYQ A;  3UO3 A;  3TL8 B;  3TAG A;  2B1E A;  4E4B A;  3UIQ A;  1FZH E;  4FJ5 A;  3N1B A;  4J2D A;  4DU3 A;  3QEX A;  4FJG A;  4FJ9 A;  2P1Q B;  1FXX A;  2OVR B;  3LDB A;  2P5G A;  3L1N A;  3CQ8 A;  3SUO A;  3LZJ A;  3SNN A;  4ADO A;  4M3U A;  3C6O B;  1MHZ G;  1XVB E;  3SI6 A;  2JHA A;  4KI4 A;  2E32 A;  3UO2 A;  2PFV A;  4X5N A;  2PFT A;  2OZS A;  1FZ1 E;  1P22 A;  1XVC E;  4ADN A;  4JS4 A;  4FJN A;  2OVQ B;  1FZ9 E;  3CFR A;  4QND A;  3TJY A;  3LD8 A;  4RNG A;  4X5M A;  3NAE A;  3QEW A;  2MMB A;  3S9H A;  3SQ2 A;  4FJX A;  2JQT A;  4RL5 A;  4M42 A;  4J2A A;  3RMB A;  3N1E A;  3CFO A;  4GAM C;  2MW2 A;  3KD5 E;  4J2B A;  2HD0 A;  1FZ0 E;  2H4T A;  2JH8 A;  4M41 A;  4EYW A;  2P5O A;  3NHG A;  2JPN A;  1FPO A;  3SCX A;  2MZW B;  4M3R A;  2B7M A;  3HL8 A;  4FJK A;  2DTU A;  3BVO A;  3NDK A;  1XVF E;  3C6N B;  2P1P B;  1NEX B;  3LZI A;  2RCU A;  3HGK E;  3QEV A;  3SQ1 A;  4FJ8 A;  2QXF A;  4M45 A;  3TAE A;  4M3Y A;  1MTY G;  1JW2 A;  5H37 A;  3RMA A;  1XU3 E;  4AKH A;  2E31 A;  4KHS A;  2JHP A;  2JH9 A;  4JRP A;  3QER A;  3TAB A;  4KI6 A;  1WAJ A;  4DTU A;  1XVD E;  1MHY G;  4KHW A;  2VJ4 A;  3E4W A;  4FJM A;  1XU5 E;  4B08 A;  1FZ8 E;  1Q9Y A;  3SVI A;  2VIX A;  3L8B A;  3QES A;  3CFP A;  3SUQ A;  3QNO A;  3RMC A;  1IG9 A;  3NCI A;  2P1N B;  3OGK B;  4HCC A;  4DTJ A;  4KHN A;  4M3Z A;  1XL3 C;  2VJ5 A;  2DEB A;  1FZI E;  1FZ7 E;  3L0M A;  3OGL B;  1WAF A;  3C6P B;  2JHC A;  3SUP A;  1XVE E;  4RG8 A;  4FK4 A;  2OZM A; 
#chains in the Genus database with same CATH homology
 1LDK E;  3HGL A;  4KHU A;  4M3X A;  2LF3 A;  4I6J B;  3OGM B;  4AKI A;  4I9L A;  4FJL A;  3HP9 A;  4AI6 A;  1FZ3 E;  4AKG A;  4M3T A;  2FW3 A;  4FJI A;  4EPH A;  1FZ6 E;  4J2E A;  4DTS A;  4DTR A;  2YB5 A;  4FJJ A;  4KHY A;  1CLQ A;  3C94 A;  5IZ7 A;  1XMG E;  3SQ0 A;  3KD1 E;  3RWU A;  2OVP B;  2FYO A;  3SPZ A;  4HCB A;  4DTP A;  4I9Q A;  4KHQ A;  3NGI A;  4M3W A;  2P1M B;  3V7D B;  4QNC A;  4DTM A;  1FZ2 E;  3LDS A;  2P1O B;  5IRE A;  3WSO A;  5IBK B;  2ATQ A;  4E3S A;  3QEI A;  1Q9X A;  1FZ5 E;  4EP9 A;  4JRQ A;  3SJJ A;  3SUN A;  3QET A;  3RMD A;  4FJ7 A;  1XMH E;  3J27 A;  2DY4 A;  4DTN A;  4FJH A;  3C95 A;  1IH7 A;  2B8I A;  3MKS B;  1MMO G;  3SQ4 A;  4JS5 A;  4DU4 A;  3NE6 A;  3QNN A;  4DTO A;  4FK2 A;  1FS1 A;  1FZ4 E;  3SPY A;  3J2P A;  3L2O B;  4DU1 A;  1FYZ E;  3K2O A;  4FK0 A;  3TAF A;  4FVM A;  1XMF E;  3QEP A;  1XVG E;  4DTX A;  3E4Y A;  2LF6 A;  2OYQ A;  3TL8 B;  3TAG A;  2B1E A;  4E4B A;  3UIQ A;  1FZH E;  4FJ5 A;  3N1B A;  4J2D A;  4DU3 A;  3QEX A;  4FJG A;  4FJ9 A;  2P1Q B;  1FXX A;  2OVR B;  3LDB A;  2P5G A;  3L1N A;  3CQ8 A;  3SUO A;  3LZJ A;  3SNN A;  4ADO A;  4M3U A;  3C6O B;  1MHZ G;  1XVB E;  3SI6 A;  2JHA A;  4KI4 A;  2E32 A;  2PFV A;  4X5N A;  2PFT A;  2OZS A;  1FZ1 E;  1P22 A;  1XVC E;  4ADN A;  4JS4 A;  4FJN A;  2OVQ B;  1FZ9 E;  3CFR A;  4QND A;  3TJY A;  3LD8 A;  4RNG A;  4X5M A;  3NAE A;  3QEW A;  2MMB A;  3S9H A;  3SQ2 A;  4FJX A;  4RL5 A;  4M42 A;  4J2A A;  3RMB A;  3N1E A;  3CFO A;  4GAM C;  3KD5 E;  4J2B A;  2HD0 A;  1FZ0 E;  2H4T A;  2JH8 A;  4M41 A;  4EYW A;  2P5O A;  3NHG A;  2JPN A;  3SCX A;  2MZW B;  4M3R A;  2B7M A;  3HL8 A;  4FJK A;  2DTU A;  3NDK A;  1XVF E;  3C6N B;  2P1P B;  1NEX B;  3LZI A;  2RCU A;  3HGK E;  3QEV A;  3SQ1 A;  4FJ8 A;  2QXF A;  4M45 A;  3TAE A;  4M3Y A;  1MTY G;  5H37 A;  3RMA A;  1XU3 E;  4AKH A;  2E31 A;  4KHS A;  2JHP A;  2JH9 A;  4JRP A;  3QER A;  3TAB A;  4KI6 A;  1WAJ A;  4DTU A;  1XVD E;  1MHY G;  4KHW A;  2VJ4 A;  3E4W A;  4FJM A;  1XU5 E;  4B08 A;  1FZ8 E;  1Q9Y A;  3SVI A;  2VIX A;  3L8B A;  3QES A;  3CFP A;  3SUQ A;  3QNO A;  3RMC A;  1IG9 A;  3NCI A;  2P1N B;  3OGK B;  4HCC A;  4DTJ A;  4KHN A;  4M3Z A;  1XL3 C;  2DEB A;  1FZI E;  1FZ7 E;  2VJ5 A;  3L0M A;  3OGL B;  1WAF A;  3C6P B;  2JHC A;  3SUP A;  1XVE E;  4RG8 A;  4FK4 A;  2OZM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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