1XU5E

Soluble methane monooxygenase hydroxylase-phenol soaked
Total Genus 62
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
62
sequence length
166
structure length
166
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
molecule keywords Methane monooxygenase component A alpha chain
publication title Product Bound Structures of the Soluble Methane Monooxygenase Hydroxylase from Methylococcus capsulatus (Bath): Protein Motion in the Alpha-Subunit
pubmed doi rcsb
total genus 62
structure length 166
sequence length 166
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2004-10-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1xu5E01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1xu5E02
1FZ4E 1MHYG 1XMFE 1MTYG 1MHZG 1XVDE 1FZ7E 1FZ5E 1XVGE 1MMOG 1XU3E 1FZ8E 1FZ6E 1XVBE 4GAMC 1XMHE 1XVEE 1XU5E 1XMGE 1FYZE 1FZ1E 1FZ9E 1XVFE 1FZIE 1XVCE 1FZ0E 1FZ2E 1FZ3E 1FZHE
chains in the Genus database with same CATH superfamily
4AKHA 2OVQB 3TJYA 2DTUA 3TL8B 4FVMA 2JH9A 3OGLB 1XMFE 3V7DB 3NGIA 4JS5A 3LZIA 1MHZG 2E32A 3L8BA 3TAFA 3TAGA 3QEPA 4IT5A 1N1CA 2P1QB 2P1OB 4ICGC 4DTJA 3KD5E 3QEVA 2MW2A 4JRQA 2MMBA 4ADNA 4DTNA 3RMBA 4FJGA 4FJ8A 4B08A 4M3TA 2JHAA 4M3XA 4KHQA 1FZ8E 4AKIA 1FPOA 1FZ6E 4JRPA 1XVBE 2P5GA 4J2AA 3OGKB 1XVEE 2OZMA 3SQ2A 3NCIA 1IG9A 1FYZE 4JS4A 3NDKA 1XVFE 3C6OB 3SI6A 4DU1A 4KHSA 4X5NA 5IREA 3SNNA 2RKHA 1XVCE 4I9LA 2DY4A 2B8IA 2B1EA 2P1PB 1WAJA 4RG8A 3QEWA 3RMAA 3RWUA 2JPNA 3QEXA 4DTRA 3LD8A 3SPYA 3NE6A 2JH8A 3LDSA 4RNGA 1FZ7E 3SVIA 5IZ7A 4DTXA 3HP9A 3SQ4A 1P22A 4EP9A 3CQ8A 3N1BA 3NAEA 4DU3A 4KHNA 3TAEA 3MKSB 4E3SA 4FJNA 4FJ7A 4M45A 4M3RA 3QNOA 4EPHA 2YB5A 3J2PA 1XMHE 3CFRA 3UO3A 3SCXA 4KHWA 1JW2A 1XMGE 2FYOA 2VIXA 4DTOA 3SUOA 3NHGA 4M42A 4I9QA 3SUNA 3KD1E 1FZ3E 3C6PB 2P1NB 2LF3A 3WSOA 4HCBA 2PFTA 1MHYG 2FW3A 2VJ5A 4ADOA 3QETA 1MTYG 3SPZA 1XVDE 4E4BA 2E31A 4DTMA 3SQ1A 1CLQA 4FK4A 4J2DA 4X5MA 4KI6A 2OVRB 1FZ5E 1XVGE 2H4TA 3L1NA 3QESA 3SJJA 3HGKE 4KHYA 1XU3E 3SUQA 2OVPB 3E4WA 4AI6A 3C6NB 4DTUA 4M3ZA 4AKGA 2B7MA 3QNNA 1FS1A 3E4YA 3C94A 4FJLA 1IH7A 3OGMB 4FJKA 4M3UA 3RMCA 4KI4A 2P5OA 2JQTA 1FZIE 3QERA 2QXFA 3LDBA 3N1EA 2OYQA 1XL3C 4FJJA 1FXXA 4FJ5A 1FZ0E 4J2EA 2DEBA 2OZSA 4FK0A 4FJ9A 5IBKB 4FJMA 3UO2A 4HCCA 1FZ4E 5H37A 4M3WA 3BVOA 4FJXA 3HL8A 2JHCA 3L0MA 4QNCA 2K5SA 2LF6A 3CFOA 2PFVA 4J2BA 4DTSA 3LZJA 4M41A 1MMOG 2VJ4A 3K2OA 2P1MB 2RCUA 3RMDA 1Q9XA 3J27A 2MZWB 4FJIA 3SUPA 4KHUA 4I6JB 4DU4A 2ATQA 3TABA 4EYWA 4FJHA 1WAFA 1Q9YA 4GAMC 3C95A 1XU5E 2HD0A 2JHPA 1FZ1E 1FZ9E 4DTPA 3HGLA 3QEIA 3S9HA 3SQ0A 1LDKE 3L2OB 1NEXB 3CFPA 4FK2A 4M3YA 3UIQA 4QNDA 4RL5A 1FZ2E 1FZHE
chains in the Genus database with same CATH topology
4AKHA 2OVQB 3TJYA 2DTUA 3TL8B 4FVMA 2JH9A 3OGLB 1XMFE 3V7DB 3NGIA 4JS5A 3LZIA 1MHZG 2E32A 3L8BA 3TAFA 3TAGA 3QEPA 2P1OB 2P1QB 4DTJA 3KD5E 3QEVA 4JRQA 2MMBA 4ADNA 4DTNA 3RMBA 4FJGA 4FJ8A 4B08A 4M3TA 2JHAA 4M3XA 4KHQA 1FZ8E 4AKIA 1FZ6E 4JRPA 1XVBE 2P5GA 4J2AA 3OGKB 1XVEE 2OZMA 3SQ2A 3NCIA 1IG9A 1FYZE 4JS4A 3NDKA 1XVFE 3C6OB 3SI6A 4DU1A 4KHSA 4X5NA 5IREA 3SNNA 4I9LA 1XVCE 2DY4A 2B8IA 2B1EA 2P1PB 1WAJA 4RG8A 3QEWA 3RMAA 3RWUA 2JPNA 3QEXA 4DTRA 3LD8A 3SPYA 3NE6A 2JH8A 3LDSA 4RNGA 1FZ7E 3SVIA 5IZ7A 4DTXA 3HP9A 3SQ4A 1P22A 4EP9A 3CQ8A 3N1BA 3NAEA 4DU3A 4KHNA 3TAEA 3MKSB 4E3SA 4FJNA 4FJ7A 4M45A 4M3RA 3QNOA 4EPHA 2YB5A 3J2PA 1XMHE 3CFRA 3SCXA 4KHWA 1XMGE 2FYOA 2VIXA 4DTOA 3SUOA 3NHGA 4M42A 4I9QA 3SUNA 3KD1E 1FZ3E 3C6PB 2P1NB 2LF3A 3WSOA 4HCBA 2PFTA 1MHYG 2FW3A 2VJ5A 4ADOA 3QETA 1MTYG 3SPZA 1XVDE 4E4BA 2E31A 4DTMA 3SQ1A 1CLQA 4FK4A 4J2DA 4X5MA 4KI6A 2OVRB 1FZ5E 1XVGE 2H4TA 3L1NA 3QESA 3SJJA 3HGKE 4KHYA 1XU3E 3SUQA 2OVPB 3E4WA 4AI6A 3C6NB 4DTUA 4M3ZA 4AKGA 2B7MA 3QNNA 1FS1A 3E4YA 3C94A 4FJLA 1IH7A 3OGMB 4FJKA 4M3UA 3RMCA 4KI4A 2P5OA 3QERA 1FZIE 2QXFA 3LDBA 3N1EA 2OYQA 1XL3C 4FJJA 1FXXA 4FJ5A 1FZ0E 4J2EA 2DEBA 2OZSA 4FK0A 4FJ9A 5IBKB 4FJMA 4HCCA 1FZ4E 5H37A 4M3WA 4FJXA 3HL8A 2JHCA 3L0MA 4QNCA 2LF6A 3CFOA 2PFVA 4J2BA 4DTSA 3LZJA 4M41A 1MMOG 2VJ4A 3K2OA 2P1MB 2RCUA 3RMDA 1Q9XA 3J27A 2MZWB 4FJIA 3SUPA 4KHUA 4I6JB 4DU4A 2ATQA 3TABA 4EYWA 4FJHA 1WAFA 1Q9YA 4GAMC 3C95A 1XU5E 2HD0A 2JHPA 1FZ1E 1FZ9E 4DTPA 3HGLA 3QEIA 3S9HA 3SQ0A 1LDKE 3L2OB 1NEXB 3CFPA 4FK2A 4M3YA 3UIQA 4QNDA 4RL5A 1FZ2E 1FZHE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1FZ4 E;  1MHY G;  1XMF E;  1MTY G;  1MHZ G;  1XVD E;  1FZ7 E;  1FZ5 E;  1XVG E;  1MMO G;  1XU3 E;  1FZ8 E;  1FZ6 E;  1XVB E;  4GAM C;  1XMH E;  1XVE E;  1XU5 E;  1XMG E;  1FYZ E;  1FZ1 E;  1FZ9 E;  1XVF E;  1FZI E;  1XVC E;  1FZ0 E;  1FZ2 E;  1FZ3 E;  1FZH E; 
#chains in the Genus database with same CATH topology
 4AKH A;  2OVQ B;  3TJY A;  2DTU A;  3TL8 B;  4FVM A;  2JH9 A;  3OGL B;  1XMF E;  3V7D B;  3NGI A;  4JS5 A;  3LZI A;  1MHZ G;  2E32 A;  3L8B A;  3TAF A;  3TAG A;  3QEP A;  4IT5 A;  1N1C A;  2P1Q B;  2P1O B;  4ICG C;  4DTJ A;  3KD5 E;  3QEV A;  2MW2 A;  4JRQ A;  2MMB A;  4ADN A;  4DTN A;  3RMB A;  4FJG A;  4FJ8 A;  4B08 A;  4M3T A;  2JHA A;  4M3X A;  4KHQ A;  1FZ8 E;  4AKI A;  1FPO A;  1FZ6 E;  4JRP A;  1XVB E;  2P5G A;  4J2A A;  3OGK B;  1XVE E;  2OZM A;  3SQ2 A;  3NCI A;  1IG9 A;  1FYZ E;  4JS4 A;  3NDK A;  1XVF E;  3C6O B;  3SI6 A;  4DU1 A;  4KHS A;  4X5N A;  5IRE A;  3SNN A;  2RKH A;  1XVC E;  4I9L A;  2DY4 A;  2B8I A;  2B1E A;  2P1P B;  1WAJ A;  4RG8 A;  3QEW A;  3RMA A;  3RWU A;  2JPN A;  3QEX A;  4DTR A;  3LD8 A;  3SPY A;  3NE6 A;  2JH8 A;  3LDS A;  4RNG A;  1FZ7 E;  3SVI A;  5IZ7 A;  4DTX A;  3HP9 A;  3SQ4 A;  1P22 A;  4EP9 A;  3CQ8 A;  3N1B A;  3NAE A;  4DU3 A;  4KHN A;  3TAE A;  3MKS B;  4E3S A;  4FJN A;  4FJ7 A;  4M45 A;  4M3R A;  3QNO A;  4EPH A;  2YB5 A;  3J2P A;  1XMH E;  3CFR A;  3UO3 A;  3SCX A;  4KHW A;  1JW2 A;  1XMG E;  2FYO A;  2VIX A;  4DTO A;  3SUO A;  3NHG A;  4M42 A;  4I9Q A;  3SUN A;  3KD1 E;  1FZ3 E;  3C6P B;  2P1N B;  2LF3 A;  3WSO A;  4HCB A;  2PFT A;  1MHY G;  2FW3 A;  2VJ5 A;  4ADO A;  3QET A;  1MTY G;  3SPZ A;  1XVD E;  4E4B A;  2E31 A;  4DTM A;  3SQ1 A;  1CLQ A;  4FK4 A;  4J2D A;  4X5M A;  4KI6 A;  2OVR B;  1FZ5 E;  1XVG E;  2H4T A;  3L1N A;  3QES A;  3SJJ A;  3HGK E;  4KHY A;  1XU3 E;  3SUQ A;  2OVP B;  3E4W A;  4AI6 A;  3C6N B;  4DTU A;  4M3Z A;  4AKG A;  2B7M A;  3QNN A;  1FS1 A;  3E4Y A;  3C94 A;  4FJL A;  1IH7 A;  3OGM B;  4FJK A;  4M3U A;  3RMC A;  4KI4 A;  2P5O A;  2JQT A;  1FZI E;  3QER A;  2QXF A;  3LDB A;  3N1E A;  2OYQ A;  1XL3 C;  4FJJ A;  1FXX A;  4FJ5 A;  1FZ0 E;  4J2E A;  2DEB A;  2OZS A;  4FK0 A;  4FJ9 A;  5IBK B;  4FJM A;  3UO2 A;  4HCC A;  1FZ4 E;  5H37 A;  4M3W A;  3BVO A;  4FJX A;  3HL8 A;  2JHC A;  3L0M A;  4QNC A;  2K5S A;  2LF6 A;  3CFO A;  2PFV A;  4J2B A;  4DTS A;  3LZJ A;  4M41 A;  1MMO G;  2VJ4 A;  3K2O A;  2P1M B;  2RCU A;  3RMD A;  1Q9X A;  3J27 A;  2MZW B;  4FJI A;  3SUP A;  4KHU A;  4I6J B;  4DU4 A;  2ATQ A;  3TAB A;  4EYW A;  4FJH A;  1WAF A;  1Q9Y A;  4GAM C;  3C95 A;  1XU5 E;  2HD0 A;  2JHP A;  1FZ1 E;  1FZ9 E;  4DTP A;  3HGL A;  3QEI A;  3S9H A;  3SQ0 A;  1LDK E;  3L2O B;  1NEX B;  3CFP A;  4FK2 A;  4M3Y A;  3UIQ A;  4QND A;  4RL5 A;  1FZ2 E;  1FZH E; 
#chains in the Genus database with same CATH homology
 4AKH A;  2OVQ B;  3TJY A;  2DTU A;  3TL8 B;  4FVM A;  2JH9 A;  3OGL B;  1XMF E;  3V7D B;  3NGI A;  4JS5 A;  3LZI A;  1MHZ G;  2E32 A;  3L8B A;  3TAF A;  3TAG A;  3QEP A;  2P1O B;  2P1Q B;  4DTJ A;  3KD5 E;  3QEV A;  4JRQ A;  2MMB A;  4ADN A;  4DTN A;  3RMB A;  4FJG A;  4FJ8 A;  4B08 A;  4M3T A;  2JHA A;  4M3X A;  4KHQ A;  1FZ8 E;  4AKI A;  1FZ6 E;  4JRP A;  1XVB E;  2P5G A;  4J2A A;  3OGK B;  1XVE E;  2OZM A;  3SQ2 A;  3NCI A;  1IG9 A;  1FYZ E;  4JS4 A;  3NDK A;  1XVF E;  3C6O B;  3SI6 A;  4DU1 A;  4KHS A;  4X5N A;  5IRE A;  3SNN A;  4I9L A;  1XVC E;  2DY4 A;  2B8I A;  2B1E A;  2P1P B;  1WAJ A;  4RG8 A;  3QEW A;  3RMA A;  3RWU A;  2JPN A;  3QEX A;  4DTR A;  3LD8 A;  3SPY A;  3NE6 A;  2JH8 A;  3LDS A;  4RNG A;  1FZ7 E;  3SVI A;  5IZ7 A;  4DTX A;  3HP9 A;  3SQ4 A;  1P22 A;  4EP9 A;  3CQ8 A;  3N1B A;  3NAE A;  4DU3 A;  4KHN A;  3TAE A;  3MKS B;  4E3S A;  4FJN A;  4FJ7 A;  4M45 A;  4M3R A;  3QNO A;  4EPH A;  2YB5 A;  3J2P A;  1XMH E;  3CFR A;  3SCX A;  4KHW A;  1XMG E;  2FYO A;  2VIX A;  4DTO A;  3SUO A;  3NHG A;  4M42 A;  4I9Q A;  3SUN A;  3KD1 E;  1FZ3 E;  3C6P B;  2P1N B;  2LF3 A;  3WSO A;  4HCB A;  2PFT A;  1MHY G;  2FW3 A;  2VJ5 A;  4ADO A;  3QET A;  1MTY G;  3SPZ A;  1XVD E;  4E4B A;  2E31 A;  4DTM A;  3SQ1 A;  1CLQ A;  4FK4 A;  4J2D A;  4X5M A;  4KI6 A;  2OVR B;  1FZ5 E;  1XVG E;  2H4T A;  3L1N A;  3QES A;  3SJJ A;  3HGK E;  4KHY A;  1XU3 E;  3SUQ A;  2OVP B;  3E4W A;  4AI6 A;  3C6N B;  4DTU A;  4M3Z A;  4AKG A;  2B7M A;  3QNN A;  1FS1 A;  3E4Y A;  3C94 A;  4FJL A;  1IH7 A;  3OGM B;  4FJK A;  4M3U A;  3RMC A;  4KI4 A;  2P5O A;  3QER A;  1FZI E;  2QXF A;  3LDB A;  3N1E A;  2OYQ A;  1XL3 C;  4FJJ A;  1FXX A;  4FJ5 A;  1FZ0 E;  4J2E A;  2DEB A;  2OZS A;  4FK0 A;  4FJ9 A;  5IBK B;  4FJM A;  4HCC A;  1FZ4 E;  5H37 A;  4M3W A;  4FJX A;  3HL8 A;  2JHC A;  3L0M A;  4QNC A;  2LF6 A;  3CFO A;  2PFV A;  4J2B A;  4DTS A;  3LZJ A;  4M41 A;  1MMO G;  2VJ4 A;  3K2O A;  2P1M B;  2RCU A;  3RMD A;  1Q9X A;  3J27 A;  2MZW B;  4FJI A;  3SUP A;  4KHU A;  4I6J B;  4DU4 A;  2ATQ A;  3TAB A;  4EYW A;  4FJH A;  1WAF A;  1Q9Y A;  4GAM C;  3C95 A;  1XU5 E;  2HD0 A;  2JHP A;  1FZ1 E;  1FZ9 E;  4DTP A;  3HGL A;  3QEI A;  3S9H A;  3SQ0 A;  1LDK E;  3L2O B;  1NEX B;  3CFP A;  4FK2 A;  4M3Y A;  3UIQ A;  4QND A;  4RL5 A;  1FZ2 E;  1FZH E; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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