1FZ2 | Genus

Total Genus 61

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	61
sequence length	167
structure length	167
Chain Sequence	KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQSP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Oxidoreductase
publication title	Crystal structures of the soluble methane monooxygenase hydroxylase from Methylococcus capsulatus (Bath) demonstrating geometrical variability at the dinuclear iron active site. pubmed doi rcsb
molecule keywords	METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN
total genus	61
structure length	167
sequence length	167
chains with identical sequence	F
ec nomenclature	ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date	2000-10-03

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
E	PF02964	MeMO_Hyd_G	Methane monooxygenase, hydrolase gamma chain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.1280.10	Mainly Alpha	Up-down Bundle	Monooxygenase	Monooxygenase	1fz2E01
1.20.1280.30	Mainly Alpha	Up-down Bundle	Monooxygenase	Monooxygenase	1fz2E02

1FYZE 1FZ8E 1FZ2E 1FZ0E 1XU5E 1MHYG 1MMOG 1MHZG 1XU3E 1FZ1E 1XVBE 1XVEE 1FZIE 1FZ4E 1XMGE 1XMHE 1XVGE 1FZ6E 1MTYG 1FZ7E 1XMFE 1FZ5E 1XVFE 1XVCE 1XVDE 4GAMC 1FZHE 1FZ3E 1FZ9E
chains in the Genus database with same CATH superfamily

1WAFA 4M3YA 3BVOA 5H37A 3NGIA 4JRPA 4KHNA 4DTOA 4DTXA 4J2AA 4FJKA 2PFTA 2P1PB 5IBKB 3QNNA 4KHSA 3NDKA 1NEXB 2P5OA 4X5NA 1XU5E 3QESA 4FJIA 4FJGA 1MHYG 4DTJA 4M41A 3OGKB 2VIXA 4M3RA 4FJXA 3CFOA 4JRQA 2JH8A 1IH7A 2P1NB 3C94A 3E4WA 4DTMA 1FZ1E 3QEPA 3KD1E 3QEWA 2OVPB 4KHUA 4IT5A 3SQ1A 3C6NB 3SJJA 3SPYA 2OVRB 3L1NA 3TAEA 4FJMA 1XMHE 4M3WA 2B7MA 4I9QA 2VJ4A 4KI4A 4I6JB 4M3XA 2JQTA 1MTYG 3RWUA 1FZ7E 3HL8A 3RMAA 1XVCE 4FJHA 1XVFE 1FZHE 1FZ3E 1FZ9E 3N1BA 3CFRA 3QNOA 3S9HA 2DTUA 4FJ5A 4EPHA 4DU1A 2HD0A 4JS4A 3HP9A 3V7DB 1FZ8E 4DU4A 3QEVA 3SQ2A 3TABA 3J27A 1FXXA 2LF3A 2P1QB 3LDSA 3SUQA 1Q9XA 4J2BA 5IZ7A 2JHPA 3SPZA 3C6OB 4DTPA 3QERA 4RL5A 4AKIA 4DTRA 3C95A 3SI6A 1FS1A 1XVBE 3HGLA 4J2EA 1FZIE 4FJ9A 1WAJA 2YB5A 3SCXA 4FVMA 1CLQA 1XMGE 2DY4A 4I9LA 4DU3A 3SNNA 3CQ8A 2QXFA 4DTUA 4FJNA 3HGKE 2ATQA 2B1EA 3RMDA 4FJJA 2FYOA 4EP9A 2P1MB 3L8BA 4FK2A 2E31A 2E32A 2JH9A 4QNDA 2VJ5A 4KHYA 2RCUA 3KD5E 3TAGA 1XL3C 3CFPA 4AKHA 1MMOG 1MHZG 4RNGA 4KI6A 1XU3E 2JPNA 2LF6A 3UO3A 3QETA 3SUPA 3SUNA 1XVEE 2MW2A 4DTNA 4M3UA 3UO2A 3TAFA 4M42A 1JW2A 1Q9YA 2OYQA 3NHGA 4FK0A 1FZ6E 3J2PA 2FW3A 3TJYA 2RKHA 1XMFE 3RMBA 3WSOA 4M3TA 1LDKE 4JS5A 1XVDE 3NE6A 4AKGA 4GAMC 4DTSA 3QEIA 3L2OB 4FJ8A 3NCIA 3SUOA 3LZJA 4KHWA 3SQ4A 2H4TA 4B08A 1FYZE 4RG8A 4EYWA 3QEXA 4ICGC 2JHCA 3C6PB 3L0MA 1P22A 4E4BA 2OVQB 1FZ2E 3SVIA 1FZ0E 2K5SA 3LDBA 4X5MA 3MKSB 3LZIA 3RMCA 2PFVA 3OGLB 4FJ7A 2OZMA 4FK4A 3LD8A 3E4YA 4AI6A 3SQ0A 2MZWB 2DEBA 4E3SA 3N1EA 1IG9A 4HCCA 3NAEA 3UIQA 1FZ4E 2OZSA 3TL8B 5IREA 3K2OA 1XVGE 2JHAA 4FJLA 2B8IA 4KHQA 4ADOA 4HCBA 4M3ZA 4J2DA 1FZ5E 4M45A 3OGMB 4ADNA 2P5GA 2MMBA 2P1OB 1N1CA 1FPOA 4QNCA
chains in the Genus database with same CATH topology

1WAFA 4M3YA 5H37A 3NGIA 4JRPA 4KHNA 4DTOA 4DTXA 4J2AA 4FJKA 2PFTA 2P1PB 5IBKB 3QNNA 4KHSA 3NDKA 1NEXB 2P5OA 4X5NA 1XU5E 3QESA 4FJIA 4FJGA 1MHYG 4DTJA 4M41A 3OGKB 2VIXA 4M3RA 4FJXA 3CFOA 4JRQA 2JH8A 1IH7A 2P1NB 3C94A 3E4WA 4DTMA 1FZ1E 3QEPA 3KD1E 3QEWA 2OVPB 4KHUA 3SQ1A 3C6NB 3SJJA 3SPYA 2OVRB 3L1NA 3TAEA 4FJMA 1XMHE 4M3WA 2B7MA 4I9QA 2VJ4A 4KI4A 4I6JB 4M3XA 1MTYG 3RWUA 1FZ7E 3HL8A 3RMAA 1XVCE 4FJHA 1XVFE 1FZHE 1FZ3E 1FZ9E 3N1BA 3CFRA 3QNOA 3S9HA 2DTUA 4FJ5A 4EPHA 4DU1A 2HD0A 4JS4A 3HP9A 3V7DB 1FZ8E 4DU4A 3QEVA 3SQ2A 3TABA 3J27A 1FXXA 2LF3A 2P1QB 3LDSA 3SUQA 1Q9XA 4J2BA 5IZ7A 2JHPA 3SPZA 3C6OB 4DTPA 3QERA 4RL5A 4AKIA 4DTRA 3C95A 3SI6A 1FS1A 1XVBE 3HGLA 4J2EA 1FZIE 4FJ9A 1WAJA 2YB5A 3SCXA 4FVMA 1CLQA 1XMGE 2DY4A 4I9LA 4DU3A 3SNNA 3CQ8A 2QXFA 4DTUA 4FJNA 3HGKE 2ATQA 2B1EA 3RMDA 4FJJA 2FYOA 4EP9A 2P1MB 3L8BA 4FK2A 2E31A 2E32A 2JH9A 4QNDA 2VJ5A 4KHYA 2RCUA 3KD5E 3TAGA 1XL3C 3CFPA 4AKHA 1MMOG 1MHZG 4RNGA 4KI6A 1XU3E 2JPNA 2LF6A 3QETA 3SUPA 3SUNA 1XVEE 4DTNA 4M3UA 3TAFA 4M42A 1Q9YA 2OYQA 3NHGA 4FK0A 1FZ6E 3J2PA 2FW3A 3TJYA 3RMBA 1XMFE 4M3TA 3WSOA 1LDKE 4JS5A 1XVDE 3NE6A 4AKGA 4GAMC 4DTSA 3QEIA 3L2OB 4FJ8A 3NCIA 3SUOA 3LZJA 4KHWA 3SQ4A 2H4TA 4B08A 1FYZE 4RG8A 4EYWA 3QEXA 2JHCA 3C6PB 3L0MA 1P22A 4E4BA 2OVQB 1FZ2E 3SVIA 1FZ0E 3LDBA 4X5MA 3MKSB 3LZIA 3RMCA 2PFVA 3OGLB 4FJ7A 2OZMA 4FK4A 3LD8A 3E4YA 4AI6A 3SQ0A 2MZWB 2DEBA 4E3SA 3N1EA 1IG9A 4HCCA 3NAEA 3UIQA 1FZ4E 2OZSA 3TL8B 5IREA 3K2OA 1XVGE 2JHAA 4FJLA 2B8IA 4KHQA 4ADOA 4HCBA 4M3ZA 4J2DA 1FZ5E 4M45A 3OGMB 4ADNA 2P5GA 2MMBA 2P1OB 4QNCA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1FYZ E;  1FZ8 E;  1FZ2 E;  1FZ0 E;  1XU5 E;  1MHY G;  1MMO G;  1MHZ G;  1XU3 E;  1FZ1 E;  1XVB E;  1XVE E;  1FZI E;  1FZ4 E;  1XMG E;  1XMH E;  1XVG E;  1FZ6 E;  1MTY G;  1FZ7 E;  1XMF E;  1FZ5 E;  1XVF E;  1XVC E;  1XVD E;  4GAM C;  1FZH E;  1FZ3 E;  1FZ9 E; 
#chains in the Genus database with same CATH topology
 1WAF A;  4M3Y A;  3BVO A;  5H37 A;  3NGI A;  4JRP A;  4KHN A;  4DTO A;  4DTX A;  4J2A A;  4FJK A;  2PFT A;  2P1P B;  5IBK B;  3QNN A;  4KHS A;  3NDK A;  1NEX B;  2P5O A;  4X5N A;  1XU5 E;  3QES A;  4FJI A;  4FJG A;  1MHY G;  4DTJ A;  4M41 A;  3OGK B;  2VIX A;  4M3R A;  4FJX A;  3CFO A;  4JRQ A;  2JH8 A;  1IH7 A;  2P1N B;  3C94 A;  3E4W A;  4DTM A;  1FZ1 E;  3QEP A;  3KD1 E;  3QEW A;  2OVP B;  4KHU A;  4IT5 A;  3SQ1 A;  3C6N B;  3SJJ A;  3SPY A;  2OVR B;  3L1N A;  3TAE A;  4FJM A;  1XMH E;  4M3W A;  2B7M A;  4I9Q A;  2VJ4 A;  4KI4 A;  4I6J B;  4M3X A;  2JQT A;  1MTY G;  3RWU A;  1FZ7 E;  3HL8 A;  3RMA A;  1XVC E;  4FJH A;  1XVF E;  1FZH E;  1FZ3 E;  1FZ9 E;  3N1B A;  3CFR A;  3QNO A;  3S9H A;  2DTU A;  4FJ5 A;  4EPH A;  4DU1 A;  2HD0 A;  4JS4 A;  3HP9 A;  3V7D B;  1FZ8 E;  4DU4 A;  3QEV A;  3SQ2 A;  3TAB A;  3J27 A;  1FXX A;  2LF3 A;  2P1Q B;  3LDS A;  3SUQ A;  1Q9X A;  4J2B A;  5IZ7 A;  2JHP A;  3SPZ A;  3C6O B;  4DTP A;  3QER A;  4RL5 A;  4AKI A;  4DTR A;  3C95 A;  3SI6 A;  1FS1 A;  1XVB E;  3HGL A;  4J2E A;  1FZI E;  4FJ9 A;  1WAJ A;  2YB5 A;  3SCX A;  4FVM A;  1CLQ A;  1XMG E;  2DY4 A;  4I9L A;  4DU3 A;  3SNN A;  3CQ8 A;  2QXF A;  4DTU A;  4FJN A;  3HGK E;  2ATQ A;  2B1E A;  3RMD A;  4FJJ A;  2FYO A;  4EP9 A;  2P1M B;  3L8B A;  4FK2 A;  2E31 A;  2E32 A;  2JH9 A;  4QND A;  2VJ5 A;  4KHY A;  2RCU A;  3KD5 E;  3TAG A;  1XL3 C;  3CFP A;  4AKH A;  1MMO G;  1MHZ G;  4RNG A;  4KI6 A;  1XU3 E;  2JPN A;  2LF6 A;  3UO3 A;  3QET A;  3SUP A;  3SUN A;  1XVE E;  2MW2 A;  4DTN A;  4M3U A;  3UO2 A;  3TAF A;  4M42 A;  1JW2 A;  1Q9Y A;  2OYQ A;  3NHG A;  4FK0 A;  1FZ6 E;  3J2P A;  2FW3 A;  3TJY A;  2RKH A;  1XMF E;  3RMB A;  3WSO A;  4M3T A;  1LDK E;  4JS5 A;  1XVD E;  3NE6 A;  4AKG A;  4GAM C;  4DTS A;  3QEI A;  3L2O B;  4FJ8 A;  3NCI A;  3SUO A;  3LZJ A;  4KHW A;  3SQ4 A;  2H4T A;  4B08 A;  1FYZ E;  4RG8 A;  4EYW A;  3QEX A;  4ICG C;  2JHC A;  3C6P B;  3L0M A;  1P22 A;  4E4B A;  2OVQ B;  1FZ2 E;  3SVI A;  1FZ0 E;  2K5S A;  3LDB A;  4X5M A;  3MKS B;  3LZI A;  3RMC A;  2PFV A;  3OGL B;  4FJ7 A;  2OZM A;  4FK4 A;  3LD8 A;  3E4Y A;  4AI6 A;  3SQ0 A;  2MZW B;  2DEB A;  4E3S A;  3N1E A;  1IG9 A;  4HCC A;  3NAE A;  3UIQ A;  1FZ4 E;  2OZS A;  3TL8 B;  5IRE A;  3K2O A;  1XVG E;  2JHA A;  4FJL A;  2B8I A;  4KHQ A;  4ADO A;  4HCB A;  4M3Z A;  4J2D A;  1FZ5 E;  4M45 A;  3OGM B;  4ADN A;  2P5G A;  2MMB A;  2P1O B;  1N1C A;  1FPO A;  4QNC A; 
#chains in the Genus database with same CATH homology
 1WAF A;  4M3Y A;  5H37 A;  3NGI A;  4JRP A;  4KHN A;  4DTO A;  4DTX A;  4J2A A;  4FJK A;  2PFT A;  2P1P B;  5IBK B;  3QNN A;  4KHS A;  3NDK A;  1NEX B;  2P5O A;  4X5N A;  1XU5 E;  3QES A;  4FJI A;  4FJG A;  1MHY G;  4DTJ A;  4M41 A;  3OGK B;  2VIX A;  4M3R A;  4FJX A;  3CFO A;  4JRQ A;  2JH8 A;  1IH7 A;  2P1N B;  3C94 A;  3E4W A;  4DTM A;  1FZ1 E;  3QEP A;  3KD1 E;  3QEW A;  2OVP B;  4KHU A;  3SQ1 A;  3C6N B;  3SJJ A;  3SPY A;  2OVR B;  3L1N A;  3TAE A;  4FJM A;  1XMH E;  4M3W A;  2B7M A;  4I9Q A;  2VJ4 A;  4KI4 A;  4I6J B;  4M3X A;  1MTY G;  3RWU A;  1FZ7 E;  3HL8 A;  3RMA A;  1XVC E;  4FJH A;  1XVF E;  1FZH E;  1FZ3 E;  1FZ9 E;  3N1B A;  3CFR A;  3QNO A;  3S9H A;  2DTU A;  4FJ5 A;  4EPH A;  4DU1 A;  2HD0 A;  4JS4 A;  3HP9 A;  3V7D B;  1FZ8 E;  4DU4 A;  3QEV A;  3SQ2 A;  3TAB A;  3J27 A;  1FXX A;  2LF3 A;  2P1Q B;  3LDS A;  3SUQ A;  1Q9X A;  4J2B A;  5IZ7 A;  2JHP A;  3SPZ A;  3C6O B;  4DTP A;  3QER A;  4RL5 A;  4AKI A;  4DTR A;  3C95 A;  3SI6 A;  1FS1 A;  1XVB E;  3HGL A;  4J2E A;  1FZI E;  4FJ9 A;  1WAJ A;  2YB5 A;  3SCX A;  4FVM A;  1CLQ A;  1XMG E;  2DY4 A;  4I9L A;  4DU3 A;  3SNN A;  3CQ8 A;  2QXF A;  4DTU A;  4FJN A;  3HGK E;  2ATQ A;  2B1E A;  3RMD A;  4FJJ A;  2FYO A;  4EP9 A;  2P1M B;  3L8B A;  4FK2 A;  2E31 A;  2E32 A;  2JH9 A;  4QND A;  2VJ5 A;  4KHY A;  2RCU A;  3KD5 E;  3TAG A;  1XL3 C;  3CFP A;  4AKH A;  1MMO G;  1MHZ G;  4RNG A;  4KI6 A;  1XU3 E;  2JPN A;  2LF6 A;  3QET A;  3SUP A;  3SUN A;  1XVE E;  4DTN A;  4M3U A;  3TAF A;  4M42 A;  1Q9Y A;  2OYQ A;  3NHG A;  4FK0 A;  1FZ6 E;  3J2P A;  2FW3 A;  3TJY A;  3RMB A;  1XMF E;  4M3T A;  3WSO A;  1LDK E;  4JS5 A;  1XVD E;  3NE6 A;  4AKG A;  4GAM C;  4DTS A;  3QEI A;  3L2O B;  4FJ8 A;  3NCI A;  3SUO A;  3LZJ A;  4KHW A;  3SQ4 A;  2H4T A;  4B08 A;  1FYZ E;  4RG8 A;  4EYW A;  3QEX A;  2JHC A;  3C6P B;  3L0M A;  1P22 A;  4E4B A;  2OVQ B;  1FZ2 E;  3SVI A;  1FZ0 E;  3LDB A;  4X5M A;  3MKS B;  3LZI A;  3RMC A;  2PFV A;  3OGL B;  4FJ7 A;  2OZM A;  4FK4 A;  3LD8 A;  3E4Y A;  4AI6 A;  3SQ0 A;  2MZW B;  2DEB A;  4E3S A;  3N1E A;  1IG9 A;  4HCC A;  3NAE A;  3UIQ A;  1FZ4 E;  2OZS A;  3TL8 B;  5IRE A;  3K2O A;  1XVG E;  2JHA A;  4FJL A;  2B8I A;  4KHQ A;  4ADO A;  4HCB A;  4M3Z A;  4J2D A;  1FZ5 E;  4M45 A;  3OGM B;  4ADN A;  2P5G A;  2MMB A;  2P1O B;  4QNC A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1FZ2E

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations