1FZ8E

Methane monooxygenase hydroxylase, form ii cocrystallized with dibromomethane
Total Genus 61
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
61
sequence length
167
structure length
167
Chain Sequence
KLGIHSNDTRDAWVNKIAQLNTLEKAAEMLKQFRMDHTTPFRNSYELDNDYLWIEAKLEEKVAVLKARAFNEVDFRHKTAFGEDAKSVLDGTVAKMNAAKDKWEAEKIHIGFRQAYKPPIMPVNYFLDGERQLGTRLMELRNLNYYDTPLEELRKQRGVRVVHLQSP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Oxidoreductase
publication title Xenon and halogenated alkanes track putative substrate binding cavities in the soluble methane monooxygenase hydroxylase.
pubmed doi rcsb
molecule keywords METHANE MONOOXYGENASE COMPONENT A, ALPHA CHAIN
total genus 61
structure length 167
sequence length 167
chains with identical sequence F
ec nomenclature ec 1.14.13.25: Methane monooxygenase (soluble).
pdb deposition date 2000-10-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02964 MeMO_Hyd_G Methane monooxygenase, hydrolase gamma chain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.10 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz8E01
1.20.1280.30 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 1fz8E02
1MMOG 1XMGE 1XVBE 1XVFE 1FZ3E 1MTYG 1MHYG 1FZIE 1MHZG 1FZ5E 1FZ0E 1XVCE 1XU5E 1XMFE 1XVGE 1FZ4E 1FZ2E 1XVDE 1FZ6E 1FYZE 1XU3E 4GAMC 1FZ9E 1FZ8E 1FZ7E 1XMHE 1FZHE 1XVEE 1FZ1E
chains in the Genus database with same CATH superfamily
3HGLA 2P1OB 4RL5A 4I9QA 4M3UA 2OVQB 4FJ5A 2JH9A 5H37A 2JHCA 2P1PB 4AKIA 1Q9YA 4ICGC 2HD0A 4FJLA 4QNCA 4FJNA 3NCIA 3L0MA 2DEBA 3SCXA 3C94A 4KHUA 2MW2A 3HGKE 3S9HA 4M3RA 4M45A 4DTJA 4DTNA 2JPNA 3WSOA 3SPZA 3SPYA 4M42A 1FZ2E 4J2EA 3N1EA 3E4YA 3L2OB 4KHSA 3CFRA 1WAJA 2YB5A 3OGKB 3QNNA 3QEIA 4FVMA 4KHNA 2VIXA 4J2AA 1XMHE 3TJYA 4J2BA 3MKSB 3NHGA 3C6PB 1FPOA 1NEXB 1LDKE 1N1CA 4HCCA 3C95A 1IG9A 3SQ2A 4FK2A 1XMGE 2QXFA 3J27A 2OZMA 4M3XA 2JHAA 3NAEA 2JQTA 2PFVA 2OYQA 3HL8A 3LDBA 4DU3A 4DTPA 1FZ3E 4FJ8A 4JS4A 2LF3A 4IT5A 2OVRB 4FJHA 1MHZG 1FZ5E 3SUNA 3BVOA 4DTXA 3UO3A 3SQ1A 3L8BA 4KI4A 3LZJA 2FYOA 4M41A 2P1QB 4DTOA 4QNDA 3V7DB 1FYZE 4X5MA 2OVPB 2FW3A 5IZ7A 3UIQA 1Q9XA 3QESA 2E31A 4I9LA 4FJ9A 1FZ8E 4DTUA 4AKHA 4B08A 4JS5A 4FJ7A 1FZHE 3SQ4A 4FJGA 1FZ1E 1MMOG 3SUOA 1CLQA 3RMAA 1XVFE 2VJ5A 3TABA 3SNNA 2ATQA 2P5GA 4KHWA 3CFPA 3RMCA 4FJIA 4AKGA 3KD1E 2RCUA 3NDKA 4DTMA 4I6JB 4JRQA 3NGIA 1MHYG 4RG8A 3TAFA 4KHQA 3RMBA 3QETA 4M3YA 2DY4A 4FK4A 4EP9A 1P22A 3QERA 1JW2A 1FZ0E 2E32A 2MMBA 2P1NB 2K5SA 3QEPA 2OZSA 3QEVA 4M3WA 2DTUA 2H4TA 1XMFE 1XVGE 2B1EA 3HP9A 4RNGA 3LZIA 3TAGA 3SQ0A 3L1NA 1FZ6E 3UO2A 4GAMC 1XU3E 3OGLB 3C6OB 4M3ZA 3QNOA 1FZ9E 3OGMB 4ADNA 3SI6A 3CQ8A 4E4BA 3LDSA 3CFOA 4J2DA 3TL8B 3SUPA 4FK0A 2JHPA 4DTRA 3QEWA 1IH7A 4ADOA 4EYWA 2VJ4A 3SJJA 4FJXA 3TAEA 4E3SA 1XVBE 3E4WA 4DTSA 3RMDA 1FXXA 3NE6A 3KD5E 4FJMA 4AI6A 4FJKA 3RWUA 4KHYA 2RKHA 2B7MA 1MTYG 4HCBA 5IREA 4FJJA 1FZIE 4JRPA 2B8IA 3C6NB 1XVCE 1XU5E 2LF6A 4DU4A 2PFTA 2P1MB 1FZ4E 4EPHA 1XVDE 1FS1A 4X5NA 3QEXA 4DU1A 3J2PA 4M3TA 3K2OA 4KI6A 2P5OA 3LD8A 3N1BA 1WAFA 3SUQA 2JH8A 2MZWB 1FZ7E 5IBKB 1XL3C 1XVEE 3SVIA
chains in the Genus database with same CATH topology
3HGLA 2P1OB 4RL5A 4I9QA 4M3UA 2OVQB 4FJ5A 2JH9A 5H37A 2JHCA 2P1PB 4AKIA 1Q9YA 2HD0A 4FJLA 4QNCA 4FJNA 3NCIA 3L0MA 2DEBA 3SCXA 3C94A 4KHUA 3HGKE 3S9HA 4M3RA 4M45A 4DTJA 4DTNA 2JPNA 3WSOA 3SPZA 3SPYA 4M42A 1FZ2E 4J2EA 3N1EA 3E4YA 3L2OB 4KHSA 3CFRA 1WAJA 2YB5A 3OGKB 3QNNA 3QEIA 4FVMA 4KHNA 2VIXA 4J2AA 1XMHE 3TJYA 4J2BA 3MKSB 3NHGA 3C6PB 1LDKE 1NEXB 4HCCA 4FK2A 3C95A 1IG9A 3SQ2A 1XMGE 2QXFA 3J27A 2OZMA 4M3XA 2JHAA 3NAEA 2PFVA 2OYQA 3HL8A 3LDBA 4DU3A 4DTPA 1FZ3E 4FJ8A 4JS4A 2LF3A 2OVRB 4FJHA 1MHZG 1FZ5E 3SUNA 4DTXA 3SQ1A 4KI4A 3L8BA 3LZJA 2FYOA 4M41A 2P1QB 4DTOA 4QNDA 3V7DB 1FYZE 4X5MA 2OVPB 2FW3A 5IZ7A 3UIQA 1Q9XA 3QESA 2E31A 4I9LA 4FJ9A 1FZ8E 4DTUA 4AKHA 4B08A 4JS5A 4FJ7A 1FZHE 3SQ4A 4FJGA 1FZ1E 1MMOG 3SUOA 1CLQA 3RMAA 1XVFE 2VJ5A 3TABA 3SNNA 2ATQA 2P5GA 4KHWA 3CFPA 3RMCA 4FJIA 4AKGA 3KD1E 2RCUA 3NDKA 4DTMA 4I6JB 4JRQA 3NGIA 1MHYG 4RG8A 3TAFA 4KHQA 3RMBA 3QETA 4M3YA 2DY4A 4FK4A 4EP9A 1P22A 3QERA 1FZ0E 2E32A 2MMBA 2P1NB 3QEPA 2OZSA 4M3WA 3QEVA 2DTUA 2H4TA 1XMFE 1XVGE 2B1EA 3HP9A 4RNGA 3LZIA 3TAGA 3SQ0A 3L1NA 1FZ6E 4GAMC 1XU3E 3OGLB 3C6OB 4M3ZA 3QNOA 1FZ9E 3OGMB 4ADNA 3SI6A 3CQ8A 4E4BA 3LDSA 3CFOA 4J2DA 3TL8B 3SUPA 4FK0A 2JHPA 4DTRA 3QEWA 1IH7A 4ADOA 4EYWA 2VJ4A 3SJJA 4FJXA 3TAEA 4E3SA 1XVBE 3E4WA 4DTSA 3RMDA 1FXXA 3NE6A 3KD5E 4FJMA 4AI6A 4FJKA 3RWUA 4KHYA 2B7MA 1MTYG 4HCBA 5IREA 4FJJA 1FZIE 4JRPA 2B8IA 3C6NB 1XVCE 1XU5E 2LF6A 4DU4A 2PFTA 2P1MB 1FZ4E 4EPHA 1XVDE 1FS1A 4X5NA 3QEXA 4DU1A 3J2PA 4M3TA 3K2OA 4KI6A 2P5OA 3LD8A 3N1BA 1WAFA 3SUQA 2JH8A 2MZWB 1FZ7E 5IBKB 1XL3C 1XVEE 3SVIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1MMO G;  1XMG E;  1XVB E;  1XVF E;  1FZ3 E;  1MTY G;  1MHY G;  1FZI E;  1MHZ G;  1FZ5 E;  1FZ0 E;  1XVC E;  1XU5 E;  1XMF E;  1XVG E;  1FZ4 E;  1FZ2 E;  1XVD E;  1FZ6 E;  1FYZ E;  1XU3 E;  4GAM C;  1FZ9 E;  1FZ8 E;  1FZ7 E;  1XMH E;  1FZH E;  1XVE E;  1FZ1 E; 
#chains in the Genus database with same CATH topology
 3HGL A;  2P1O B;  4RL5 A;  4I9Q A;  4M3U A;  2OVQ B;  4FJ5 A;  2JH9 A;  5H37 A;  2JHC A;  2P1P B;  4AKI A;  1Q9Y A;  4ICG C;  2HD0 A;  4FJL A;  4QNC A;  4FJN A;  3NCI A;  3L0M A;  2DEB A;  3SCX A;  3C94 A;  4KHU A;  2MW2 A;  3HGK E;  3S9H A;  4M3R A;  4M45 A;  4DTJ A;  4DTN A;  2JPN A;  3WSO A;  3SPZ A;  3SPY A;  4M42 A;  1FZ2 E;  4J2E A;  3N1E A;  3E4Y A;  3L2O B;  4KHS A;  3CFR A;  1WAJ A;  2YB5 A;  3OGK B;  3QNN A;  3QEI A;  4FVM A;  4KHN A;  2VIX A;  4J2A A;  1XMH E;  3TJY A;  4J2B A;  3MKS B;  3NHG A;  3C6P B;  1FPO A;  1NEX B;  1LDK E;  1N1C A;  4HCC A;  3C95 A;  1IG9 A;  3SQ2 A;  4FK2 A;  1XMG E;  2QXF A;  3J27 A;  2OZM A;  4M3X A;  2JHA A;  3NAE A;  2JQT A;  2PFV A;  2OYQ A;  3HL8 A;  3LDB A;  4DU3 A;  4DTP A;  1FZ3 E;  4FJ8 A;  4JS4 A;  2LF3 A;  4IT5 A;  2OVR B;  4FJH A;  1MHZ G;  1FZ5 E;  3SUN A;  3BVO A;  4DTX A;  3UO3 A;  3SQ1 A;  3L8B A;  4KI4 A;  3LZJ A;  2FYO A;  4M41 A;  2P1Q B;  4DTO A;  4QND A;  3V7D B;  1FYZ E;  4X5M A;  2OVP B;  2FW3 A;  5IZ7 A;  3UIQ A;  1Q9X A;  3QES A;  2E31 A;  4I9L A;  4FJ9 A;  1FZ8 E;  4DTU A;  4AKH A;  4B08 A;  4JS5 A;  4FJ7 A;  1FZH E;  3SQ4 A;  4FJG A;  1FZ1 E;  1MMO G;  3SUO A;  1CLQ A;  3RMA A;  1XVF E;  2VJ5 A;  3TAB A;  3SNN A;  2ATQ A;  2P5G A;  4KHW A;  3CFP A;  3RMC A;  4FJI A;  4AKG A;  3KD1 E;  2RCU A;  3NDK A;  4DTM A;  4I6J B;  4JRQ A;  3NGI A;  1MHY G;  4RG8 A;  3TAF A;  4KHQ A;  3RMB A;  3QET A;  4M3Y A;  2DY4 A;  4FK4 A;  4EP9 A;  1P22 A;  3QER A;  1JW2 A;  1FZ0 E;  2E32 A;  2MMB A;  2P1N B;  2K5S A;  3QEP A;  2OZS A;  3QEV A;  4M3W A;  2DTU A;  2H4T A;  1XMF E;  1XVG E;  2B1E A;  3HP9 A;  4RNG A;  3LZI A;  3TAG A;  3SQ0 A;  3L1N A;  1FZ6 E;  3UO2 A;  4GAM C;  1XU3 E;  3OGL B;  3C6O B;  4M3Z A;  3QNO A;  1FZ9 E;  3OGM B;  4ADN A;  3SI6 A;  3CQ8 A;  4E4B A;  3LDS A;  3CFO A;  4J2D A;  3TL8 B;  3SUP A;  4FK0 A;  2JHP A;  4DTR A;  3QEW A;  1IH7 A;  4ADO A;  4EYW A;  2VJ4 A;  3SJJ A;  4FJX A;  3TAE A;  4E3S A;  1XVB E;  3E4W A;  4DTS A;  3RMD A;  1FXX A;  3NE6 A;  3KD5 E;  4FJM A;  4AI6 A;  4FJK A;  3RWU A;  4KHY A;  2RKH A;  2B7M A;  1MTY G;  4HCB A;  5IRE A;  4FJJ A;  1FZI E;  4JRP A;  2B8I A;  3C6N B;  1XVC E;  1XU5 E;  2LF6 A;  4DU4 A;  2PFT A;  2P1M B;  1FZ4 E;  4EPH A;  1XVD E;  1FS1 A;  4X5N A;  3QEX A;  4DU1 A;  3J2P A;  4M3T A;  3K2O A;  4KI6 A;  2P5O A;  3LD8 A;  3N1B A;  1WAF A;  3SUQ A;  2JH8 A;  2MZW B;  1FZ7 E;  5IBK B;  1XL3 C;  1XVE E;  3SVI A; 
#chains in the Genus database with same CATH homology
 3HGL A;  2P1O B;  4RL5 A;  4I9Q A;  4M3U A;  2OVQ B;  4FJ5 A;  2JH9 A;  5H37 A;  2JHC A;  2P1P B;  4AKI A;  1Q9Y A;  2HD0 A;  4FJL A;  4QNC A;  4FJN A;  3NCI A;  3L0M A;  2DEB A;  3SCX A;  3C94 A;  4KHU A;  3HGK E;  3S9H A;  4M3R A;  4M45 A;  4DTJ A;  4DTN A;  2JPN A;  3WSO A;  3SPZ A;  3SPY A;  4M42 A;  1FZ2 E;  4J2E A;  3N1E A;  3E4Y A;  3L2O B;  4KHS A;  3CFR A;  1WAJ A;  2YB5 A;  3OGK B;  3QNN A;  3QEI A;  4FVM A;  4KHN A;  2VIX A;  4J2A A;  1XMH E;  3TJY A;  4J2B A;  3MKS B;  3NHG A;  3C6P B;  1LDK E;  1NEX B;  4HCC A;  4FK2 A;  3C95 A;  1IG9 A;  3SQ2 A;  1XMG E;  2QXF A;  3J27 A;  2OZM A;  4M3X A;  2JHA A;  3NAE A;  2PFV A;  2OYQ A;  3HL8 A;  3LDB A;  4DU3 A;  4DTP A;  1FZ3 E;  4FJ8 A;  4JS4 A;  2LF3 A;  2OVR B;  4FJH A;  1MHZ G;  1FZ5 E;  3SUN A;  4DTX A;  3SQ1 A;  4KI4 A;  3L8B A;  3LZJ A;  2FYO A;  4M41 A;  2P1Q B;  4DTO A;  4QND A;  3V7D B;  1FYZ E;  4X5M A;  2OVP B;  2FW3 A;  5IZ7 A;  3UIQ A;  1Q9X A;  3QES A;  2E31 A;  4I9L A;  4FJ9 A;  1FZ8 E;  4DTU A;  4AKH A;  4B08 A;  4JS5 A;  4FJ7 A;  1FZH E;  3SQ4 A;  4FJG A;  1FZ1 E;  1MMO G;  3SUO A;  1CLQ A;  3RMA A;  1XVF E;  2VJ5 A;  3TAB A;  3SNN A;  2ATQ A;  2P5G A;  4KHW A;  3CFP A;  3RMC A;  4FJI A;  4AKG A;  3KD1 E;  2RCU A;  3NDK A;  4DTM A;  4I6J B;  4JRQ A;  3NGI A;  1MHY G;  4RG8 A;  3TAF A;  4KHQ A;  3RMB A;  3QET A;  4M3Y A;  2DY4 A;  4FK4 A;  4EP9 A;  1P22 A;  3QER A;  1FZ0 E;  2E32 A;  2MMB A;  2P1N B;  3QEP A;  2OZS A;  4M3W A;  3QEV A;  2DTU A;  2H4T A;  1XMF E;  1XVG E;  2B1E A;  3HP9 A;  4RNG A;  3LZI A;  3TAG A;  3SQ0 A;  3L1N A;  1FZ6 E;  4GAM C;  1XU3 E;  3OGL B;  3C6O B;  4M3Z A;  3QNO A;  1FZ9 E;  3OGM B;  4ADN A;  3SI6 A;  3CQ8 A;  4E4B A;  3LDS A;  3CFO A;  4J2D A;  3TL8 B;  3SUP A;  4FK0 A;  2JHP A;  4DTR A;  3QEW A;  1IH7 A;  4ADO A;  4EYW A;  2VJ4 A;  3SJJ A;  4FJX A;  3TAE A;  4E3S A;  1XVB E;  3E4W A;  4DTS A;  3RMD A;  1FXX A;  3NE6 A;  3KD5 E;  4FJM A;  4AI6 A;  4FJK A;  3RWU A;  4KHY A;  2B7M A;  1MTY G;  4HCB A;  5IRE A;  4FJJ A;  1FZI E;  4JRP A;  2B8I A;  3C6N B;  1XVC E;  1XU5 E;  2LF6 A;  4DU4 A;  2PFT A;  2P1M B;  1FZ4 E;  4EPH A;  1XVD E;  1FS1 A;  4X5N A;  3QEX A;  4DU1 A;  3J2P A;  4M3T A;  3K2O A;  4KI6 A;  2P5O A;  3LD8 A;  3N1B A;  1WAF A;  3SUQ A;  2JH8 A;  2MZW B;  1FZ7 E;  5IBK B;  1XL3 C;  1XVE E;  3SVI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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