2B7MA

Crystal structure of the s. cerevisiae exocyst component exo70p
Total Genus 173
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
173
sequence length
551
structure length
513
Chain Sequence
SVKDLANEASKYEIILQKGINQVGLKQYTQVVHKLDDMLEDIQSGQANREENSEFHGILTHLEQLIKRSEAQLRVYFISILNSIKPFDPQINITKKMPFPYYEDQQLGALSWILDYFHGNSEGSIIQDILVGERSKLILKCMAFLEPFAKESSGMNSYTEALLGFIANEKSLVDDLYSQYTESKPHVLSQILSPLISAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKELQNYNLLQDCTQEVRQVTQSLFRDAIDRIIKKANSISTIPSNNGVTEATVDTMSRLRKFSEYKNGCLGAMDNITRENWLPSNYKEKEYTLQNEALNWEDHNVLLSCFISDCIDTLAVNLERKAQIALMPNQEPDVANPNSSKNKHKQRIGFFILMNLTLVEQIVEKSELNLMLAGEGHSRLERLKKRYISYMVSDWRDLTANLMEGFEDLVSKTKQYKLSDPSLKVTLKSEIISLVMPMYERFYSRYKDSFKNPRKHIKYTPDELTTVLNQLVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Endocytosis/exocytosis
molecule keywords Exocyst complex component EXO70
publication title Crystal Structure of the S.cerevisiae Exocyst Component Exo70p
pubmed doi rcsb
source organism Saccharomyces cerevisiae
total genus 173
structure length 513
sequence length 551
chains with identical sequence B, C, D
ec nomenclature
pdb deposition date 2005-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF03081 Exo70 Exo70 exocyst complex subunit
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.170 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 2b7mA00
2B7MA 2PFVA 4RL5A 2B1EA 2PFTA
chains in the Genus database with same CATH superfamily
1FZ5E 1LDKE 1XMHE 4DU4A 3UIQA 3NGIA 4M3RA 5H37A 4M3TA 4EYWA 1JW2A 3C6PB 5IREA 4DTRA 3C95A 3KD1E 4ADNA 4EP9A 3QNOA 4J2EA 2JHPA 1FYZE 1MMOG 2FW3A 4DTOA 4KHUA 4KI4A 3NHGA 4DTNA 1FZ8E 2LF3A 4QNDA 3J2PA 4DU3A 3RMBA 2PFTA 3SPZA 2K5SA 4KHYA 4FJIA 4I9QA 1FZ7E 4QNCA 4DTPA 3C6OB 2OVQB 3SQ0A 4JRPA 3MKSB 1Q9XA 1MHYG 2JQTA 4FK2A 4RL5A 3CQ8A 4I6JB 3UO3A 4FK4A 3SPYA 3E4WA 1XVGE 1N1CA 2YB5A 1FZ3E 3N1BA 2DEBA 3LDBA 2P1PB 3E4YA 1WAFA 4HCCA 2MMBA 2JH9A 4E3SA 3QEXA 1XMGE 4JS5A 1FZ0E 2JHAA 4AKHA 2P5GA 4AI6A 1P22A 3BVOA 4DTMA 1XVDE 3KD5E 2H4TA 4FJGA 1WAJA 4M45A 1IG9A 3SQ4A 1FZ1E 2PFVA 4M41A 3QESA 4GAMC 4RG8A 3TABA 4FJKA 4FJMA 4J2DA 2P1OB 3CFRA 3LDSA 3HGKE 3LZIA 4FJHA 4X5NA 1FZ6E 2LF6A 3V7DB 3SJJA 2OZSA 4FJ8A 3K2OA 3OGMB 3RMCA 3NAEA 3QEVA 3OGLB 3UO2A 2OYQA 1Q9YA 2P5OA 4FVMA 3NCIA 3TAGA 1IH7A 4KI6A 3HL8A 2P1MB 2OZMA 2VJ5A 3J27A 4J2BA 4KHWA 4M42A 4FJXA 1CLQA 4JRQA 2VIXA 4ADOA 3RMAA 1NEXB 1FZHE 2P1QB 3CFOA 2QXFA 1FZ9E 3TL8B 4KHNA 4KHQA 1XVBE 4B08A 2HD0A 2DTUA 4FJ5A 3SVIA 4J2AA 1XVFE 2JPNA 3OGKB 4DTUA 4FJJA 2ATQA 4RNGA 3NE6A 3L2OB 3SI6A 2FYOA 2RCUA 4EPHA 3CFPA 3SQ1A 4FJNA 1XU5E 3S9HA 3WSOA 3QETA 3QEPA 4AKIA 2B1EA 3RWUA 3QEIA 4JS4A 4X5MA 2P1NB 3TAFA 2B7MA 1FS1A 3C6NB 4DU1A 5IBKB 3RMDA 4M3YA 1XL3C 2VJ4A 3SUOA 3SQ2A 3SCXA 2OVPB 4KHSA 3QNNA 1XVEE 4HCBA 3TJYA 4FJ7A 4FK0A 4E4BA 1FXXA 4I9LA 3HP9A 3L8BA 1FZ4E 3HGLA 1XVCE 2E31A 4M3ZA 3SUPA 4DTSA 3L1NA 3C94A 3LD8A 5IZ7A 3QERA 4DTXA 3SUQA 3QEWA 1XU3E 1FPOA 3TAEA 2JH8A 2MW2A 4ICGC 1FZIE 4M3UA 4DTJA 2E32A 2OVRB 4FJ9A 2RKHA 3N1EA 1FZ2E 3L0MA 4FJLA 1XMFE 1MHZG 2JHCA 3LZJA 3SUNA 4IT5A 3SNNA 4M3WA 2DY4A 3NDKA 4AKGA 2MZWB 1MTYG 2B8IA 4M3XA
chains in the Genus database with same CATH topology
1FZ5E 1LDKE 1XMHE 4DU4A 3UIQA 3NGIA 4M3RA 5H37A 4M3TA 4EYWA 3C6PB 5IREA 4DTRA 3C95A 3KD1E 4ADNA 4EP9A 3QNOA 4J2EA 2JHPA 1FYZE 1MMOG 2FW3A 4DTOA 4KHUA 4KI4A 3NHGA 4DTNA 1FZ8E 2LF3A 4QNDA 3J2PA 4DU3A 3RMBA 2PFTA 3SPZA 4KHYA 4FJIA 4I9QA 1FZ7E 4QNCA 4DTPA 3C6OB 2OVQB 3SQ0A 4JRPA 3MKSB 1Q9XA 1MHYG 4FK2A 4RL5A 3CQ8A 4I6JB 4FK4A 3SPYA 3E4WA 1XVGE 2YB5A 1FZ3E 3N1BA 2DEBA 3LDBA 2P1PB 3E4YA 1WAFA 4HCCA 2MMBA 2JH9A 4E3SA 3QEXA 1XMGE 4JS5A 1FZ0E 2JHAA 4AKHA 2P5GA 4AI6A 1P22A 4DTMA 1XVDE 3KD5E 2H4TA 4FJGA 1WAJA 4M45A 1IG9A 3SQ4A 1FZ1E 2PFVA 4M41A 3QESA 4GAMC 4RG8A 3TABA 4FJKA 4FJMA 4J2DA 2P1OB 3CFRA 3LDSA 3HGKE 3LZIA 4FJHA 4X5NA 1FZ6E 2LF6A 3V7DB 3SJJA 2OZSA 4FJ8A 3K2OA 3OGMB 3RMCA 3NAEA 3QEVA 3OGLB 2OYQA 1Q9YA 2P5OA 4FVMA 3NCIA 3TAGA 1IH7A 4KI6A 3HL8A 2P1MB 2OZMA 2VJ5A 3J27A 4J2BA 4KHWA 4M42A 4FJXA 1CLQA 4JRQA 2VIXA 4ADOA 3RMAA 1NEXB 1FZHE 2P1QB 3CFOA 2QXFA 1FZ9E 3TL8B 4KHNA 4KHQA 1XVBE 4B08A 2HD0A 2DTUA 4FJ5A 3SVIA 4J2AA 1XVFE 2JPNA 3OGKB 4DTUA 4FJJA 2ATQA 4RNGA 3NE6A 3L2OB 3SI6A 2FYOA 2RCUA 4EPHA 3CFPA 3SQ1A 4FJNA 1XU5E 3S9HA 3WSOA 3QETA 3QEPA 4AKIA 2B1EA 3RWUA 3QEIA 4JS4A 4X5MA 2P1NB 3TAFA 2B7MA 1FS1A 3C6NB 4DU1A 5IBKB 3RMDA 4M3YA 1XL3C 2VJ4A 3SUOA 3SQ2A 3SCXA 2OVPB 4KHSA 3QNNA 1XVEE 4HCBA 3TJYA 4FJ7A 4FK0A 4E4BA 1FXXA 4I9LA 3HP9A 3L8BA 1FZ4E 3HGLA 1XVCE 2E31A 4M3ZA 3SUPA 4DTSA 3L1NA 3C94A 3LD8A 5IZ7A 3QERA 4DTXA 3SUQA 3QEWA 1XU3E 3TAEA 2JH8A 1FZIE 4M3UA 4DTJA 2E32A 2OVRB 4FJ9A 3N1EA 1FZ2E 3L0MA 4FJLA 1XMFE 1MHZG 2JHCA 3LZJA 3SUNA 2DY4A 3SNNA 4M3WA 4AKGA 3NDKA 2MZWB 1MTYG 2B8IA 4M3XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2B7M A;  2PFV A;  4RL5 A;  2B1E A;  2PFT A; 
#chains in the Genus database with same CATH topology
 1FZ5 E;  1LDK E;  1XMH E;  4DU4 A;  3UIQ A;  3NGI A;  4M3R A;  5H37 A;  4M3T A;  4EYW A;  1JW2 A;  3C6P B;  5IRE A;  4DTR A;  3C95 A;  3KD1 E;  4ADN A;  4EP9 A;  3QNO A;  4J2E A;  2JHP A;  1FYZ E;  1MMO G;  2FW3 A;  4DTO A;  4KHU A;  4KI4 A;  3NHG A;  4DTN A;  1FZ8 E;  2LF3 A;  4QND A;  3J2P A;  4DU3 A;  3RMB A;  2PFT A;  3SPZ A;  2K5S A;  4KHY A;  4FJI A;  4I9Q A;  1FZ7 E;  4QNC A;  4DTP A;  3C6O B;  2OVQ B;  3SQ0 A;  4JRP A;  3MKS B;  1Q9X A;  1MHY G;  2JQT A;  4FK2 A;  4RL5 A;  3CQ8 A;  4I6J B;  3UO3 A;  4FK4 A;  3SPY A;  3E4W A;  1XVG E;  1N1C A;  2YB5 A;  1FZ3 E;  3N1B A;  2DEB A;  3LDB A;  2P1P B;  3E4Y A;  1WAF A;  4HCC A;  2MMB A;  2JH9 A;  4E3S A;  3QEX A;  1XMG E;  4JS5 A;  1FZ0 E;  2JHA A;  4AKH A;  2P5G A;  4AI6 A;  1P22 A;  3BVO A;  4DTM A;  1XVD E;  3KD5 E;  2H4T A;  4FJG A;  1WAJ A;  4M45 A;  1IG9 A;  3SQ4 A;  1FZ1 E;  2PFV A;  4M41 A;  3QES A;  4GAM C;  4RG8 A;  3TAB A;  4FJK A;  4FJM A;  4J2D A;  2P1O B;  3CFR A;  3LDS A;  3HGK E;  3LZI A;  4FJH A;  4X5N A;  1FZ6 E;  2LF6 A;  3V7D B;  3SJJ A;  2OZS A;  4FJ8 A;  3K2O A;  3OGM B;  3RMC A;  3NAE A;  3QEV A;  3OGL B;  3UO2 A;  2OYQ A;  1Q9Y A;  2P5O A;  4FVM A;  3NCI A;  3TAG A;  1IH7 A;  4KI6 A;  3HL8 A;  2P1M B;  2OZM A;  2VJ5 A;  3J27 A;  4J2B A;  4KHW A;  4M42 A;  4FJX A;  1CLQ A;  4JRQ A;  2VIX A;  4ADO A;  3RMA A;  1NEX B;  1FZH E;  2P1Q B;  3CFO A;  2QXF A;  1FZ9 E;  3TL8 B;  4KHN A;  4KHQ A;  1XVB E;  4B08 A;  2HD0 A;  2DTU A;  4FJ5 A;  3SVI A;  4J2A A;  1XVF E;  2JPN A;  3OGK B;  4DTU A;  4FJJ A;  2ATQ A;  4RNG A;  3NE6 A;  3L2O B;  3SI6 A;  2FYO A;  2RCU A;  4EPH A;  3CFP A;  3SQ1 A;  4FJN A;  1XU5 E;  3S9H A;  3WSO A;  3QET A;  3QEP A;  4AKI A;  2B1E A;  3RWU A;  3QEI A;  4JS4 A;  4X5M A;  2P1N B;  3TAF A;  2B7M A;  1FS1 A;  3C6N B;  4DU1 A;  5IBK B;  3RMD A;  4M3Y A;  1XL3 C;  2VJ4 A;  3SUO A;  3SQ2 A;  3SCX A;  2OVP B;  4KHS A;  3QNN A;  1XVE E;  4HCB A;  3TJY A;  4FJ7 A;  4FK0 A;  4E4B A;  1FXX A;  4I9L A;  3HP9 A;  3L8B A;  1FZ4 E;  3HGL A;  1XVC E;  2E31 A;  4M3Z A;  3SUP A;  4DTS A;  3L1N A;  3C94 A;  3LD8 A;  5IZ7 A;  3QER A;  4DTX A;  3SUQ A;  3QEW A;  1XU3 E;  1FPO A;  3TAE A;  2JH8 A;  2MW2 A;  4ICG C;  1FZI E;  4M3U A;  4DTJ A;  2E32 A;  2OVR B;  4FJ9 A;  2RKH A;  3N1E A;  1FZ2 E;  3L0M A;  4FJL A;  1XMF E;  1MHZ G;  2JHC A;  3LZJ A;  3SUN A;  4IT5 A;  3SNN A;  4M3W A;  2DY4 A;  3NDK A;  4AKG A;  2MZW B;  1MTY G;  2B8I A;  4M3X A; 
#chains in the Genus database with same CATH homology
 1FZ5 E;  1LDK E;  1XMH E;  4DU4 A;  3UIQ A;  3NGI A;  4M3R A;  5H37 A;  4M3T A;  4EYW A;  3C6P B;  5IRE A;  4DTR A;  3C95 A;  3KD1 E;  4ADN A;  4EP9 A;  3QNO A;  4J2E A;  2JHP A;  1FYZ E;  1MMO G;  2FW3 A;  4DTO A;  4KHU A;  4KI4 A;  3NHG A;  4DTN A;  1FZ8 E;  2LF3 A;  4QND A;  3J2P A;  4DU3 A;  3RMB A;  2PFT A;  3SPZ A;  4KHY A;  4FJI A;  4I9Q A;  1FZ7 E;  4QNC A;  4DTP A;  3C6O B;  2OVQ B;  3SQ0 A;  4JRP A;  3MKS B;  1Q9X A;  1MHY G;  4FK2 A;  4RL5 A;  3CQ8 A;  4I6J B;  4FK4 A;  3SPY A;  3E4W A;  1XVG E;  2YB5 A;  1FZ3 E;  3N1B A;  2DEB A;  3LDB A;  2P1P B;  3E4Y A;  1WAF A;  4HCC A;  2MMB A;  2JH9 A;  4E3S A;  3QEX A;  1XMG E;  4JS5 A;  1FZ0 E;  2JHA A;  4AKH A;  2P5G A;  4AI6 A;  1P22 A;  4DTM A;  1XVD E;  3KD5 E;  2H4T A;  4FJG A;  1WAJ A;  4M45 A;  1IG9 A;  3SQ4 A;  1FZ1 E;  2PFV A;  4M41 A;  3QES A;  4GAM C;  4RG8 A;  3TAB A;  4FJK A;  4FJM A;  4J2D A;  2P1O B;  3CFR A;  3LDS A;  3HGK E;  3LZI A;  4FJH A;  4X5N A;  1FZ6 E;  2LF6 A;  3V7D B;  3SJJ A;  2OZS A;  4FJ8 A;  3K2O A;  3OGM B;  3RMC A;  3NAE A;  3QEV A;  3OGL B;  2OYQ A;  1Q9Y A;  2P5O A;  4FVM A;  3NCI A;  3TAG A;  1IH7 A;  4KI6 A;  3HL8 A;  2P1M B;  2OZM A;  2VJ5 A;  3J27 A;  4J2B A;  4KHW A;  4M42 A;  4FJX A;  1CLQ A;  4JRQ A;  2VIX A;  4ADO A;  3RMA A;  1NEX B;  1FZH E;  2P1Q B;  3CFO A;  2QXF A;  1FZ9 E;  3TL8 B;  4KHN A;  4KHQ A;  1XVB E;  4B08 A;  2HD0 A;  2DTU A;  4FJ5 A;  3SVI A;  4J2A A;  1XVF E;  2JPN A;  3OGK B;  4DTU A;  4FJJ A;  2ATQ A;  4RNG A;  3NE6 A;  3L2O B;  3SI6 A;  2FYO A;  2RCU A;  4EPH A;  3CFP A;  3SQ1 A;  4FJN A;  1XU5 E;  3S9H A;  3WSO A;  3QET A;  3QEP A;  4AKI A;  2B1E A;  3RWU A;  3QEI A;  4JS4 A;  4X5M A;  2P1N B;  3TAF A;  2B7M A;  1FS1 A;  3C6N B;  4DU1 A;  5IBK B;  3RMD A;  4M3Y A;  1XL3 C;  2VJ4 A;  3SUO A;  3SQ2 A;  3SCX A;  2OVP B;  4KHS A;  3QNN A;  1XVE E;  4HCB A;  3TJY A;  4FJ7 A;  4FK0 A;  4E4B A;  1FXX A;  4I9L A;  3HP9 A;  3L8B A;  1FZ4 E;  3HGL A;  1XVC E;  2E31 A;  4M3Z A;  3SUP A;  4DTS A;  3L1N A;  3C94 A;  3LD8 A;  5IZ7 A;  3QER A;  4DTX A;  3SUQ A;  3QEW A;  1XU3 E;  3TAE A;  2JH8 A;  1FZI E;  4M3U A;  4DTJ A;  2E32 A;  2OVR B;  4FJ9 A;  3N1E A;  1FZ2 E;  3L0M A;  4FJL A;  1XMF E;  1MHZ G;  2JHC A;  3LZJ A;  3SUN A;  2DY4 A;  3SNN A;  4M3W A;  4AKG A;  3NDK A;  2MZW B;  1MTY G;  2B8I A;  4M3X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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