3TJYA

Structure of the pto-binding domain of hoppmal generated by limited chymotrypsin digestion
Total Genus 27

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
78
structure length
78
Chain Sequence
TGAVPRANRIVQQLVEAGADLANIRTMFRNMLRGEEMILSRAEQNVFLQHFPDMLPCGIDRNSELAIALREALRRADS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Signaling protein
source organism Pseudomonas syringae pv. maculicola
publication title Structural analysis of HopPmaL reveals the presence of a second adaptor domain common to the HopAB family of Pseudomonas syringae type III effectors.
pubmed doi rcsb
molecule keywords Effector protein hopAB3
total genus 27
structure length 78
sequence length 78
ec nomenclature
pdb deposition date 2011-08-25
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1280.110 Mainly Alpha Up-down Bundle Monooxygenase Monooxygenase 3tjyA00
3HGLA 3HGKE 3SVIA 3TJYA
chains in the Genus database with same CATH superfamily
2JHAA 2P5OA 3OGKB 2LF6A 3N1EA 3NDKA 2K5SA 3HGLA 4ADNA 1XMGE 3C6NB 1FZ8E 3NAEA 2DTUA 3BVOA 1P22A 3LD8A 1FZ2E 1FZ7E 2P1QB 4FJ8A 3MKSB 2DY4A 1XMFE 2RKHA 2DEBA 4X5MA 4EPHA 2P1PB 3TAFA 4KHYA 2LF3A 3QEWA 3V7DB 1FZ4E 5IREA 4KI4A 5H37A 3HP9A 2OVRB 4JS4A 1XMHE 1XL3C 1WAFA 3SCXA 1FZ6E 4M45A 3SQ2A 1XVGE 2VJ4A 3RMBA 2MZWB 2P1NB 2FW3A 4FJIA 4ADOA 3SUQA 3J2PA 2JQTA 4DTUA 4M3WA 2FYOA 3SQ4A 3SPYA 4FJKA 4E3SA 2PFTA 3NCIA 2OVPB 4JS5A 3QEIA 3L1NA 3SUNA 4J2AA 4HCCA 4KHWA 3TL8B 1WAJA 3QNOA 4J2BA 1IH7A 3RMAA 4DTNA 4FJ7A 3E4YA 2OVQB 3L0MA 3TJYA 3LZJA 4FJGA 2VJ5A 3C6PB 4KHQA 1MHYG 4RL5A 3QERA 3SQ1A 3SPZA 3CQ8A 2JHPA 5IBKB 3LDSA 1JW2A 4KHUA 4M3ZA 2P5GA 3QEVA 3SQ0A 2B8IA 3C94A 4FJXA 3UO2A 4AI6A 1FZHE 4DTOA 1CLQA 2YB5A 3WSOA 2QXFA 4EP9A 4DTPA 4FJJA 4FJLA 4M3XA 1FZ5E 1N1CA 4M3UA 3CFRA 4DTJA 1IG9A 2JPNA 4FVMA 2E31A 3KD1E 3N1BA 3NE6A 1XVBE 4J2EA 1NEXB 1Q9YA 4I9QA 3KD5E 4I9LA 4FJMA 4HCBA 2HD0A 3SUPA 3LZIA 3UO3A 3C6OB 3L8BA 1FZIE 3SJJA 4FJ5A 3OGLB 4M42A 3J27A 3NHGA 2JH9A 2B1EA 1XVFE 4X5NA 3CFPA 3L2OB 4GAMC 1FXXA 1Q9XA 5IZ7A 3QETA 4JRPA 4FK4A 3C95A 1MTYG 1XVEE 4EYWA 1MMOG 3SVIA 1XVDE 2P1MB 2PFVA 3SI6A 4QNDA 3SUOA 4M3TA 3QEXA 3HGKE 3UIQA 4DTSA 1LDKE 4M41A 3QNNA 2H4TA 4JRQA 4AKHA 3RWUA 3HL8A 2OYQA 4FJHA 4FJNA 4M3YA 4RG8A 4DU3A 1FZ9E 3S9HA 1FPOA 2P1OB 4FJ9A 4KHSA 4QNCA 2JH8A 4DTXA 3LDBA 2VIXA 3K2OA 3TAEA 4M3RA 3QEPA 2OZMA 2OZSA 3OGMB 4KI6A 4DU1A 1FZ1E 1XU5E 1FZ0E 3NGIA 1XU3E 1MHZG 2E32A 4KHNA 4FK0A 2ATQA 2JHCA 4I6JB 3QESA 2MMBA 3TAGA 4FK2A 1FS1A 1FZ3E 1XVCE 4DU4A 3TABA 4AKGA 4AKIA 4RNGA 3RMCA 4ICGC 4B08A 1FYZE 2MW2A 4J2DA 3SNNA 3E4WA 4E4BA 3CFOA 2B7MA 2RCUA 4IT5A 4DTRA 4DTMA 3RMDA
chains in the Genus database with same CATH topology
2JHAA 2P5OA 3OGKB 2LF6A 3N1EA 3NDKA 3HGLA 4ADNA 1XMGE 3C6NB 1FZ8E 3NAEA 2DTUA 1P22A 3LD8A 1FZ2E 1FZ7E 2P1QB 4FJ8A 3MKSB 2DY4A 1XMFE 2DEBA 4X5MA 4EPHA 2P1PB 3TAFA 4KHYA 2LF3A 3QEWA 3V7DB 1FZ4E 5IREA 4KI4A 5H37A 3HP9A 2OVRB 4JS4A 1XMHE 1XL3C 1WAFA 3SCXA 1FZ6E 4M45A 3SQ2A 1XVGE 2VJ4A 3RMBA 2MZWB 2P1NB 2FW3A 4FJIA 4ADOA 3SUQA 3J2PA 4DTUA 4M3WA 2FYOA 3SQ4A 3SPYA 4FJKA 4E3SA 2PFTA 3NCIA 2OVPB 4JS5A 3QEIA 3L1NA 3SUNA 4J2AA 4HCCA 4KHWA 3TL8B 1WAJA 3QNOA 4J2BA 1IH7A 3RMAA 4DTNA 4FJ7A 3E4YA 2OVQB 3L0MA 3TJYA 3LZJA 4FJGA 2VJ5A 3C6PB 4KHQA 1MHYG 4RL5A 3QERA 3SQ1A 3SPZA 3CQ8A 2JHPA 5IBKB 3LDSA 4KHUA 4M3ZA 2P5GA 3QEVA 3SQ0A 2B8IA 3C94A 4FJXA 4AI6A 1FZHE 4DTOA 1CLQA 2YB5A 3WSOA 2QXFA 4EP9A 4DTPA 4FJJA 4FJLA 4M3XA 1FZ5E 4M3UA 3CFRA 4DTJA 1IG9A 2JPNA 4FVMA 2E31A 3KD1E 3N1BA 3NE6A 1XVBE 4J2EA 1NEXB 1Q9YA 4I9QA 3KD5E 4I9LA 4FJMA 4HCBA 2HD0A 3SUPA 3LZIA 3SJJA 3C6OB 3L8BA 1FZIE 4FJ5A 3OGLB 4M42A 3J27A 3NHGA 2JH9A 2B1EA 1XVFE 4X5NA 3CFPA 3L2OB 4GAMC 1FXXA 1Q9XA 5IZ7A 3QETA 4JRPA 4FK4A 3C95A 1MTYG 1XVEE 4EYWA 1MMOG 3SVIA 1XVDE 2P1MB 2PFVA 3SI6A 4QNDA 3SUOA 4M3TA 3QEXA 3HGKE 3UIQA 4DTSA 1LDKE 4M41A 3QNNA 2H4TA 4JRQA 4AKHA 3RWUA 3HL8A 2OYQA 4FJHA 4FJNA 4M3YA 4RG8A 4DU3A 1FZ9E 3S9HA 2P1OB 4FJ9A 4KHSA 4QNCA 2JH8A 4DTXA 3LDBA 2VIXA 3K2OA 3TAEA 4M3RA 3QEPA 2OZMA 2OZSA 3OGMB 4KI6A 4DU1A 1FZ1E 1XU5E 1FZ0E 3NGIA 1XU3E 1MHZG 2E32A 4KHNA 4FK0A 2ATQA 2JHCA 4I6JB 3QESA 2MMBA 3TAGA 4FK2A 1FS1A 1FZ3E 1XVCE 4DU4A 3TABA 4AKGA 4AKIA 4RNGA 3RMCA 4B08A 1FYZE 4J2DA 3SNNA 3E4WA 4E4BA 3CFOA 2B7MA 2RCUA 4DTRA 4DTMA 3RMDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HGL A;  3HGK E;  3SVI A;  3TJY A; 
#chains in the Genus database with same CATH topology
 2JHA A;  2P5O A;  3OGK B;  2LF6 A;  3N1E A;  3NDK A;  2K5S A;  3HGL A;  4ADN A;  1XMG E;  3C6N B;  1FZ8 E;  3NAE A;  2DTU A;  3BVO A;  1P22 A;  3LD8 A;  1FZ2 E;  1FZ7 E;  2P1Q B;  4FJ8 A;  3MKS B;  2DY4 A;  1XMF E;  2RKH A;  2DEB A;  4X5M A;  4EPH A;  2P1P B;  3TAF A;  4KHY A;  2LF3 A;  3QEW A;  3V7D B;  1FZ4 E;  5IRE A;  4KI4 A;  5H37 A;  3HP9 A;  2OVR B;  4JS4 A;  1XMH E;  1XL3 C;  1WAF A;  3SCX A;  1FZ6 E;  4M45 A;  3SQ2 A;  1XVG E;  2VJ4 A;  3RMB A;  2MZW B;  2P1N B;  2FW3 A;  4FJI A;  4ADO A;  3SUQ A;  3J2P A;  2JQT A;  4DTU A;  4M3W A;  2FYO A;  3SQ4 A;  3SPY A;  4FJK A;  4E3S A;  2PFT A;  3NCI A;  2OVP B;  4JS5 A;  3QEI A;  3L1N A;  3SUN A;  4J2A A;  4HCC A;  4KHW A;  3TL8 B;  1WAJ A;  3QNO A;  4J2B A;  1IH7 A;  3RMA A;  4DTN A;  4FJ7 A;  3E4Y A;  2OVQ B;  3L0M A;  3TJY A;  3LZJ A;  4FJG A;  2VJ5 A;  3C6P B;  4KHQ A;  1MHY G;  4RL5 A;  3QER A;  3SQ1 A;  3SPZ A;  3CQ8 A;  2JHP A;  5IBK B;  3LDS A;  1JW2 A;  4KHU A;  4M3Z A;  2P5G A;  3QEV A;  3SQ0 A;  2B8I A;  3C94 A;  4FJX A;  3UO2 A;  4AI6 A;  1FZH E;  4DTO A;  1CLQ A;  2YB5 A;  3WSO A;  2QXF A;  4EP9 A;  4DTP A;  4FJJ A;  4FJL A;  4M3X A;  1FZ5 E;  1N1C A;  4M3U A;  3CFR A;  4DTJ A;  1IG9 A;  2JPN A;  4FVM A;  2E31 A;  3KD1 E;  3N1B A;  3NE6 A;  1XVB E;  4J2E A;  1NEX B;  1Q9Y A;  4I9Q A;  3KD5 E;  4I9L A;  4FJM A;  4HCB A;  2HD0 A;  3SUP A;  3LZI A;  3UO3 A;  3C6O B;  3L8B A;  1FZI E;  3SJJ A;  4FJ5 A;  3OGL B;  4M42 A;  3J27 A;  3NHG A;  2JH9 A;  2B1E A;  1XVF E;  4X5N A;  3CFP A;  3L2O B;  4GAM C;  1FXX A;  1Q9X A;  5IZ7 A;  3QET A;  4JRP A;  4FK4 A;  3C95 A;  1MTY G;  1XVE E;  4EYW A;  1MMO G;  3SVI A;  1XVD E;  2P1M B;  2PFV A;  3SI6 A;  4QND A;  3SUO A;  4M3T A;  3QEX A;  3HGK E;  3UIQ A;  4DTS A;  1LDK E;  4M41 A;  3QNN A;  2H4T A;  4JRQ A;  4AKH A;  3RWU A;  3HL8 A;  2OYQ A;  4FJH A;  4FJN A;  4M3Y A;  4RG8 A;  4DU3 A;  1FZ9 E;  3S9H A;  1FPO A;  2P1O B;  4FJ9 A;  4KHS A;  4QNC A;  2JH8 A;  4DTX A;  3LDB A;  2VIX A;  3K2O A;  3TAE A;  4M3R A;  3QEP A;  2OZM A;  2OZS A;  3OGM B;  4KI6 A;  4DU1 A;  1FZ1 E;  1XU5 E;  1FZ0 E;  3NGI A;  1XU3 E;  1MHZ G;  2E32 A;  4KHN A;  4FK0 A;  2ATQ A;  2JHC A;  4I6J B;  3QES A;  2MMB A;  3TAG A;  4FK2 A;  1FS1 A;  1FZ3 E;  1XVC E;  4DU4 A;  3TAB A;  4AKG A;  4AKI A;  4RNG A;  3RMC A;  4ICG C;  4B08 A;  1FYZ E;  2MW2 A;  4J2D A;  3SNN A;  3E4W A;  4E4B A;  3CFO A;  2B7M A;  2RCU A;  4IT5 A;  4DTR A;  4DTM A;  3RMD A; 
#chains in the Genus database with same CATH homology
 2JHA A;  2P5O A;  3OGK B;  2LF6 A;  3N1E A;  3NDK A;  3HGL A;  4ADN A;  1XMG E;  3C6N B;  1FZ8 E;  3NAE A;  2DTU A;  1P22 A;  3LD8 A;  1FZ2 E;  1FZ7 E;  2P1Q B;  4FJ8 A;  3MKS B;  2DY4 A;  1XMF E;  2DEB A;  4X5M A;  4EPH A;  2P1P B;  3TAF A;  4KHY A;  2LF3 A;  3QEW A;  3V7D B;  1FZ4 E;  5IRE A;  4KI4 A;  5H37 A;  3HP9 A;  2OVR B;  4JS4 A;  1XMH E;  1XL3 C;  1WAF A;  3SCX A;  1FZ6 E;  4M45 A;  3SQ2 A;  1XVG E;  2VJ4 A;  3RMB A;  2MZW B;  2P1N B;  2FW3 A;  4FJI A;  4ADO A;  3SUQ A;  3J2P A;  4DTU A;  4M3W A;  2FYO A;  3SQ4 A;  3SPY A;  4FJK A;  4E3S A;  2PFT A;  3NCI A;  2OVP B;  4JS5 A;  3QEI A;  3L1N A;  3SUN A;  4J2A A;  4HCC A;  4KHW A;  3TL8 B;  1WAJ A;  3QNO A;  4J2B A;  1IH7 A;  3RMA A;  4DTN A;  4FJ7 A;  3E4Y A;  2OVQ B;  3L0M A;  3TJY A;  3LZJ A;  4FJG A;  2VJ5 A;  3C6P B;  4KHQ A;  1MHY G;  4RL5 A;  3QER A;  3SQ1 A;  3SPZ A;  3CQ8 A;  2JHP A;  5IBK B;  3LDS A;  4KHU A;  4M3Z A;  2P5G A;  3QEV A;  3SQ0 A;  2B8I A;  3C94 A;  4FJX A;  4AI6 A;  1FZH E;  4DTO A;  1CLQ A;  2YB5 A;  3WSO A;  2QXF A;  4EP9 A;  4DTP A;  4FJJ A;  4FJL A;  4M3X A;  1FZ5 E;  4M3U A;  3CFR A;  4DTJ A;  1IG9 A;  2JPN A;  4FVM A;  2E31 A;  3KD1 E;  3N1B A;  3NE6 A;  1XVB E;  4J2E A;  1NEX B;  1Q9Y A;  4I9Q A;  3KD5 E;  4I9L A;  4FJM A;  4HCB A;  2HD0 A;  3SUP A;  3LZI A;  3SJJ A;  3C6O B;  3L8B A;  1FZI E;  4FJ5 A;  3OGL B;  4M42 A;  3J27 A;  3NHG A;  2JH9 A;  2B1E A;  1XVF E;  4X5N A;  3CFP A;  3L2O B;  4GAM C;  1FXX A;  1Q9X A;  5IZ7 A;  3QET A;  4JRP A;  4FK4 A;  3C95 A;  1MTY G;  1XVE E;  4EYW A;  1MMO G;  3SVI A;  1XVD E;  2P1M B;  2PFV A;  3SI6 A;  4QND A;  3SUO A;  4M3T A;  3QEX A;  3HGK E;  3UIQ A;  4DTS A;  1LDK E;  4M41 A;  3QNN A;  2H4T A;  4JRQ A;  4AKH A;  3RWU A;  3HL8 A;  2OYQ A;  4FJH A;  4FJN A;  4M3Y A;  4RG8 A;  4DU3 A;  1FZ9 E;  3S9H A;  2P1O B;  4FJ9 A;  4KHS A;  4QNC A;  2JH8 A;  4DTX A;  3LDB A;  2VIX A;  3K2O A;  3TAE A;  4M3R A;  3QEP A;  2OZM A;  2OZS A;  3OGM B;  4KI6 A;  4DU1 A;  1FZ1 E;  1XU5 E;  1FZ0 E;  3NGI A;  1XU3 E;  1MHZ G;  2E32 A;  4KHN A;  4FK0 A;  2ATQ A;  2JHC A;  4I6J B;  3QES A;  2MMB A;  3TAG A;  4FK2 A;  1FS1 A;  1FZ3 E;  1XVC E;  4DU4 A;  3TAB A;  4AKG A;  4AKI A;  4RNG A;  3RMC A;  4B08 A;  1FYZ E;  4J2D A;  3SNN A;  3E4W A;  4E4B A;  3CFO A;  2B7M A;  2RCU A;  4DTR A;  4DTM A;  3RMD A; 
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